DDX11 3090

Name: DDX11	Sequence: fasta or formatted (970aa)		NCBI GI: 132566527
Description: DEAD/H (Asp-Glu-Ala-Asp/His) box polypeptide 11 isoform 3		Referenced in: DEAD / H Helicase Family
Other entries for this name: alt prot [906aa] DEAD/H (Asp-Glu-Ala-Asp/His) box polypeptide 11 isoform 1 alt prot [856aa] DEAD/H (Asp-Glu-Ala-Asp/His) box polypeptide 11 isoform 2
Composition: Amino acid Percentage Count Longest homopolymer A alanine 7.5 73 2 C cysteine 3.2 31 3 D aspartate 3.3 32 2 E glutamate 9.1 88 4 F phenylalanine 3.5 34 2 G glycine 7.5 73 2 H histidine 2.4 23 1 I isoleucine 3.4 33 2 K lysine 5.2 50 3 L leucine 10.5 102 3 M methionine 2.0 19 2 N asparagine 2.5 24 1 P proline 5.7 55 2 Q glutamine 7.3 71 2 R arginine 7.1 69 3 S serine 6.4 62 3 T threonine 3.6 35 2 V valine 7.0 68 2 W tryptophan 0.7 7 1 Y tyrosine 2.2 21 2			Comparative genomics: Search single species RefSeq proteins at NCBI H. sapiens M. musculus D. rerio C. intestinalis S. purpuratus D. melanogaster C. elegans A. thaliana S. cerevisiae E. coli W3110 A. pernix K1 Search summary Figure data Additional searches of RefSeq proteins at NCBI All Eukaryotes Bacteria Archaea Viruses Primates Mammals Vertebrates
Related human proteins: Protein Relative score Description Self-match 1.000 DEAD/H (Asp-Glu-Ala-Asp/His) box polypeptide 11 iso... DDX11 0.828 DEAD/H (Asp-Glu-Ala-Asp/His) box polypeptide 11 iso... DDX12 0.809 DEAD/H (Asp-Glu-Ala-Asp/His) box polypeptide 12 [Ho... DDX11 0.760 DEAD/H (Asp-Glu-Ala-Asp/His) box polypeptide 11 iso... LOC100134008 0.151 PREDICTED: similar to DEAD/H (Asp-Glu-Ala-Asp/His) ... LOC100291587 0.129 PREDICTED: similar to Putative ATP-dependent RNA he... BRIP1 0.107 BRCA1 interacting protein C-terminal helicase 1 [Hom... RTEL1 0.082 regulator of telomere elongation helicase 1 isoform ... RTEL1 0.082 regulator of telomere elongation helicase 1 isoform 1... ERCC2 0.060 excision repair cross-complementing rodent repair de... ERCC2 0.022 excision repair cross-complementing rodent repair d... LOC100287596 0.017 PREDICTED: hypothetical protein XP_002342944 LOC100288486 0.017 PREDICTED: hypothetical protein XP_002343431 LOC100287102 0.017 PREDICTED: hypothetical protein XP_002342051 MYH14 0.014 myosin, heavy chain 14 isoform 1 MYH14 0.014 myosin, heavy chain 14 isoform 2 MYH14 0.014 myosin, heavy chain 14 isoform 3 CCDC64 0.013 coiled-coil domain containing 64 TCHH 0.013 trichohyalin MAP7D2 0.013 MAP7 domain containing 2 INCENP 0.012 inner centromere protein antigens 135/155kDa isofor... INCENP 0.012 inner centromere protein antigens 135/155kDa isofor... PLEC1 0.012 plectin 1 isoform 11 PLEC1 0.012 plectin 1 isoform 10 PLEC1 0.012 plectin 1 isoform 8 PLEC1 0.012 plectin 1 isoform 7 PLEC1 0.012 plectin 1 isoform 6 PLEC1 0.012 plectin 1 isoform 3 PLEC1 0.012 plectin 1 isoform 2 PLEC1 0.012 plectin 1 isoform 1 Human BLASTP results (used to prepare the table)

Gene descriptions are from NCBI RefSeq. Search results were obtained with NCBI BLAST and RefSeq entries. When identical proteins are present, the self-match may not be listed first in BLASTP output. In such cases, the table above has been reordered to place it first.

See About the Figures for the scoring system used in the figure above right. The same scoring system was used in the table of BLASTP results.