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Search of human proteins with 239755450
BLASTP 2.2.11 [Jun-05-2005]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= gi|239755450 PREDICTED: hypothetical protein [Homo sapiens]
(153 letters)
Database: hs.faa
37,866 sequences; 18,247,518 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
gi|239755450 PREDICTED: hypothetical protein [Homo sapiens] 315 7e-87
gi|239749929 PREDICTED: hypothetical protein [Homo sapiens] 314 2e-86
gi|239744238 PREDICTED: hypothetical protein [Homo sapiens] 314 2e-86
gi|237757326 synaptojanin 1 isoform d [Homo sapiens] 48 4e-06
gi|118572613 splicing coactivator subunit SRm300 [Homo sapiens] 47 8e-06
gi|169207312 PREDICTED: hypothetical protein [Homo sapiens] 44 4e-05
gi|239750650 PREDICTED: hypothetical protein [Homo sapiens] 44 4e-05
gi|89037350 PREDICTED: hypothetical protein [Homo sapiens] 44 4e-05
gi|13376335 hypothetical protein LOC79946 [Homo sapiens] 44 4e-05
gi|50428940 mediator complex subunit 25 [Homo sapiens] 44 5e-05
gi|239748752 PREDICTED: hypothetical protein XP_002346787 [Homo ... 44 7e-05
gi|237757310 synaptojanin 1 isoform a [Homo sapiens] 43 9e-05
gi|237757308 synaptojanin 1 isoform b [Homo sapiens] 43 9e-05
gi|110832843 TBP-associated factor 4 [Homo sapiens] 43 9e-05
gi|190014636 hypothetical protein LOC286262 isoform 2 [Homo sapi... 43 9e-05
gi|190014638 hypothetical protein LOC286262 isoform 1 [Homo sapi... 43 9e-05
gi|33286446 opioid growth factor receptor [Homo sapiens] 41 3e-04
gi|239754327 PREDICTED: chromosome 6 open reading frame 132 [Hom... 41 3e-04
gi|239748855 PREDICTED: chromosome 6 open reading frame 132 [Hom... 41 3e-04
gi|239742884 PREDICTED: hypothetical protein LOC647024 [Homo sap... 41 3e-04
gi|109715839 adherens junction associated protein 1 [Homo sapiens] 41 5e-04
gi|9055278 adherens junction associated protein 1 [Homo sapiens] 41 5e-04
gi|209977046 fibrous sheath CABYR binding protein [Homo sapiens] 40 6e-04
gi|237757312 synaptojanin 1 isoform c [Homo sapiens] 40 8e-04
gi|32996733 Ras association (RalGDS/AF-6) domain family 5 isofor... 40 8e-04
gi|32996731 Ras association (RalGDS/AF-6) domain family 5 isofor... 40 8e-04
gi|239751471 PREDICTED: hypothetical protein XP_002347846 [Homo ... 40 8e-04
gi|239749835 PREDICTED: hypothetical protein XP_002347183 [Homo ... 40 8e-04
gi|239744125 PREDICTED: hypothetical protein XP_002343039 [Homo ... 40 8e-04
gi|111118972 collagen, type XI, alpha 2 isoform 2 preproprotein ... 40 8e-04
>gi|239755450 PREDICTED: hypothetical protein [Homo sapiens]
Length = 153
Score = 315 bits (808), Expect = 7e-87
Identities = 153/153 (100%), Positives = 153/153 (100%)
Query: 1 MWLELRAGRAGRGPWIIRGASRPSGAESYSELLSSRPASPRGASFSAEPRPRASLPPPRP 60
MWLELRAGRAGRGPWIIRGASRPSGAESYSELLSSRPASPRGASFSAEPRPRASLPPPRP
Sbjct: 1 MWLELRAGRAGRGPWIIRGASRPSGAESYSELLSSRPASPRGASFSAEPRPRASLPPPRP 60
Query: 61 ARPSHLLWPKRLPGRPGRAPGDRRAALPPPGTRSPFARAAAELGPSYQQIAGLRRRPVSH 120
ARPSHLLWPKRLPGRPGRAPGDRRAALPPPGTRSPFARAAAELGPSYQQIAGLRRRPVSH
Sbjct: 61 ARPSHLLWPKRLPGRPGRAPGDRRAALPPPGTRSPFARAAAELGPSYQQIAGLRRRPVSH 120
Query: 121 SPAHERPSPASSAAASARTSRGDSGDPGPEAGA 153
SPAHERPSPASSAAASARTSRGDSGDPGPEAGA
Sbjct: 121 SPAHERPSPASSAAASARTSRGDSGDPGPEAGA 153
>gi|239749929 PREDICTED: hypothetical protein [Homo sapiens]
Length = 153
Score = 314 bits (804), Expect = 2e-86
Identities = 152/153 (99%), Positives = 152/153 (99%)
Query: 1 MWLELRAGRAGRGPWIIRGASRPSGAESYSELLSSRPASPRGASFSAEPRPRASLPPPRP 60
MWLELRAGRAGRGPWIIRGASRPSGAESYSELLSSRP SPRGASFSAEPRPRASLPPPRP
Sbjct: 1 MWLELRAGRAGRGPWIIRGASRPSGAESYSELLSSRPVSPRGASFSAEPRPRASLPPPRP 60
Query: 61 ARPSHLLWPKRLPGRPGRAPGDRRAALPPPGTRSPFARAAAELGPSYQQIAGLRRRPVSH 120
ARPSHLLWPKRLPGRPGRAPGDRRAALPPPGTRSPFARAAAELGPSYQQIAGLRRRPVSH
Sbjct: 61 ARPSHLLWPKRLPGRPGRAPGDRRAALPPPGTRSPFARAAAELGPSYQQIAGLRRRPVSH 120
Query: 121 SPAHERPSPASSAAASARTSRGDSGDPGPEAGA 153
SPAHERPSPASSAAASARTSRGDSGDPGPEAGA
Sbjct: 121 SPAHERPSPASSAAASARTSRGDSGDPGPEAGA 153
>gi|239744238 PREDICTED: hypothetical protein [Homo sapiens]
Length = 153
Score = 314 bits (804), Expect = 2e-86
Identities = 152/153 (99%), Positives = 152/153 (99%)
Query: 1 MWLELRAGRAGRGPWIIRGASRPSGAESYSELLSSRPASPRGASFSAEPRPRASLPPPRP 60
MWLELRAGRAGRGPWIIRGASRPSGAESYSELLSSRP SPRGASFSAEPRPRASLPPPRP
Sbjct: 1 MWLELRAGRAGRGPWIIRGASRPSGAESYSELLSSRPVSPRGASFSAEPRPRASLPPPRP 60
Query: 61 ARPSHLLWPKRLPGRPGRAPGDRRAALPPPGTRSPFARAAAELGPSYQQIAGLRRRPVSH 120
ARPSHLLWPKRLPGRPGRAPGDRRAALPPPGTRSPFARAAAELGPSYQQIAGLRRRPVSH
Sbjct: 61 ARPSHLLWPKRLPGRPGRAPGDRRAALPPPGTRSPFARAAAELGPSYQQIAGLRRRPVSH 120
Query: 121 SPAHERPSPASSAAASARTSRGDSGDPGPEAGA 153
SPAHERPSPASSAAASARTSRGDSGDPGPEAGA
Sbjct: 121 SPAHERPSPASSAAASARTSRGDSGDPGPEAGA 153
>gi|237757326 synaptojanin 1 isoform d [Homo sapiens]
Length = 1526
Score = 47.8 bits (112), Expect = 4e-06
Identities = 42/134 (31%), Positives = 60/134 (44%), Gaps = 7/134 (5%)
Query: 18 RGASRPSGAES-YSELLSSRPASPRGASFSAEPRPRASLPPPRP-ARPSHLLWPKRLPGR 75
R SR G S S + ++PA+P A+P PPPRP A P+ P+R P
Sbjct: 1065 RAPSRTPGPPSAQSSPIDAQPATPLPQKDPAQPLEPKRPPPPRPVAPPTRPAPPQRPPPP 1124
Query: 76 PGRAPGDRRAALPPPGTRSPFARAAAELGPSYQQIAGLRRRPVSHSPAHERPSPASSAAA 135
GR+ +A L PG P + A P+ AG+ P SH+ A S +
Sbjct: 1125 SGRSQPSPQAGLAGPG---PAGYSTAR--PTIPPRAGVISAPQSHARASAGRLTPESQSK 1179
Query: 136 SARTSRGDSGDPGP 149
++ TS+G + P P
Sbjct: 1180 TSETSKGSTFLPEP 1193
>gi|118572613 splicing coactivator subunit SRm300 [Homo sapiens]
Length = 2752
Score = 46.6 bits (109), Expect = 8e-06
Identities = 42/129 (32%), Positives = 55/129 (42%), Gaps = 10/129 (7%)
Query: 20 ASRPSGAESYSELLSSRPASPRGASFSAEPRPRASLPPPRPARPSHLLWPKRLPGRPGR- 78
+S S + S S SS +S +S S+ +S P PA+P PK P P +
Sbjct: 2611 SSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSPSPAKPGPQALPK--PASPKKP 2668
Query: 79 APGDRRAALPPPGTRSPFARAAAELGPSYQQIAGLRRRPVSHSPAHERPSPASSAAASAR 138
PG+RR+ P R P SY + RRRP S P+ +SS S R
Sbjct: 2669 PPGERRSRSP----RKPIDSLRDSRSLSYSPVE--RRRP-SPQPSPRDQQSSSSERGSRR 2721
Query: 139 TSRGDSGDP 147
RGDS P
Sbjct: 2722 GQRGDSRSP 2730
Score = 36.6 bits (83), Expect = 0.009
Identities = 37/135 (27%), Positives = 58/135 (42%), Gaps = 8/135 (5%)
Query: 18 RGASRPSGAESYSELLSSRPASPRGASFSAEPRPRASLPPPRPARPSHLLWPKRLPGRPG 77
R +S S + S S SS +S + S+ +SLP +P L KR+P P
Sbjct: 2531 RSSSSSSSSSSSSSSSSSSSSSSSSSGSSSSDSEGSSLP----VQPEVAL--KRVPS-PT 2583
Query: 78 RAPGDR-RAALPPPGTRSPFARAAAELGPSYQQIAGLRRRPVSHSPAHERPSPASSAAAS 136
AP + R PP T + R ++ S + S S + S +SS+++S
Sbjct: 2584 PAPKEAVREGRPPEPTPAKRKRRSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSS 2643
Query: 137 ARTSRGDSGDPGPEA 151
+ +S PGP+A
Sbjct: 2644 SSSSSPSPAKPGPQA 2658
Score = 35.0 bits (79), Expect = 0.025
Identities = 39/137 (28%), Positives = 48/137 (35%), Gaps = 7/137 (5%)
Query: 9 RAGRGPWIIRGASRPSGAESYSELLSSRPASPRGASFSAEPRPRASLPPPRPARPSHLLW 68
R GR RG S + S PA RG S S P R S R S
Sbjct: 550 RRGRSRSARRGRSHSRSPATRGRSRSRTPAR-RGRSRSRTPARRRSRSRTPTRRRSRSRT 608
Query: 69 PKRLPGRPGRAPGDRRAALPPPGTRSPFARAAAELGPSYQQIAGLRRRPVSHSPAHERPS 128
P R R P RR+ TRSP R + P+ + R P + R +
Sbjct: 609 PARRGRSRSRTPARRRSR-----TRSPVRRRSRSRSPARRSGRSRSRTPARRGRSRSR-T 662
Query: 129 PASSAAASARTSRGDSG 145
PA + +RT SG
Sbjct: 663 PARRGRSRSRTPARRSG 679
Score = 32.7 bits (73), Expect = 0.12
Identities = 42/153 (27%), Positives = 60/153 (39%), Gaps = 17/153 (11%)
Query: 3 LELRAGRAGRGPWII---RGASRP-SGAESYSELLSSRP-ASPRGASFSAEPRPRASLPP 57
L R R+G P + R A R SG++S E + P A PR + + + R P
Sbjct: 1591 LSPRRSRSGSSPEVKDKPRAAPRAQSGSDSSPEPKAPAPRALPRRSRSGSSSKGRGPSPE 1650
Query: 58 PRPARPSHLLWPKRLPGRPGRAPGDRRAALPPPGTRSPFARAAAELGPSYQQIAGLRRRP 117
+ S P+ P G R + P +R+P R ++ P + A L RR
Sbjct: 1651 GSSSTESS---PEHPPKSRTARRGSRSSPEPKTKSRTPPRRRSSRSSPELTRKARLSRRS 1707
Query: 118 VSHS---------PAHERPSPASSAAASARTSR 141
S S P R SP+ S+ A SR
Sbjct: 1708 RSASSSPETRSRTPPRHRRSPSVSSPEPAEKSR 1740
Score = 32.0 bits (71), Expect = 0.21
Identities = 39/158 (24%), Positives = 63/158 (39%), Gaps = 19/158 (12%)
Query: 7 AGRAGRG--PWIIRGAS---RPSGAESYSELLSSRPASPRGASFSAEPRPRASLPPPRPA 61
+GR G G P+ G + RPS E+ ++ +P+SP + A+ P P P
Sbjct: 300 SGRRGEGDAPFSEPGTTSTQRPSSPETATK----QPSSPYEDKDKDKKEKSATRPSPSPE 355
Query: 62 RPSHLLWPKRLPGRPGRAPGDRRAALPPPGTRSPFARAA----AELGPSYQQIA--GLRR 115
R S P+ P P +R P P +P ++ +E P+ + +
Sbjct: 356 RSS--TGPE--PPAPTPLLAERHGGSPQPLATTPLSQEPVNPPSEASPTRDRSPPKSPEK 411
Query: 116 RPVSHSPAHERPSPASSAAASARTSRGDSGDPGPEAGA 153
P S S PSP + + +S +S P P G+
Sbjct: 412 LPQSSSSESSPPSPQPTKVSRHASSSPESPKPAPAPGS 449
Score = 30.4 bits (67), Expect = 0.62
Identities = 40/154 (25%), Positives = 57/154 (37%), Gaps = 8/154 (5%)
Query: 3 LELRAGRAGRGPWIIRGASRP---SGAESYSELLSSRPASPRGASFSAEPRPRASLPPPR 59
L LR +G P + + P S + S SR R S S+ P + S P R
Sbjct: 773 LSLRRSLSGSSPCPKQKSQTPPRRSRSGSSQPKAKSRTPPRRSRSSSSPPPKQKSKTPSR 832
Query: 60 PARPSHLLWPKRLPGRPGRAPGDRRAALPPPGTRSPFARAAAELGPSYQQIAGLRRRPVS 119
+ S PK G P R G + + +P R+ E P + + R P
Sbjct: 833 QSHSSSSPHPKVKSGTPPR-QGSITSPQANEQSVTPQRRSCFESSPDPELKS---RTPSR 888
Query: 120 HSPAHERPSPASSAAASARTSRGDSGDPGPEAGA 153
HS + P P ++ R S S P P+ A
Sbjct: 889 HSCSGSSP-PRVKSSTPPRQSPSRSSSPQPKVKA 921
Score = 30.4 bits (67), Expect = 0.62
Identities = 38/136 (27%), Positives = 52/136 (38%), Gaps = 10/136 (7%)
Query: 12 RGPWIIRGASRP-----SGAESYSELLSSRPASPRGASFSAEPRPRASLPPPRPARPSHL 66
R P I R SR S S S +R S AS + R R+ PP R
Sbjct: 1879 RTPLISRRRSRSRTSPVSRRRSRSRTSVTRRRSRSRASPVSRRRSRSRTPPVTRRRSRSR 1938
Query: 67 LWPKRLPGRPGRAPGDRRAALP--PPGTRSPFARAAAELGPSYQQIAGLRRRPVSHSPAH 124
R R P RR + PP TR R+ + P ++ + R PV+ +
Sbjct: 1939 TPTTRRRSRSRTPPVTRRRSRSRTPPVTRR---RSRSRTSPITRRRSRSRTSPVTRRRSR 1995
Query: 125 ERPSPASSAAASARTS 140
R SP + + +RTS
Sbjct: 1996 SRTSPVTRRRSRSRTS 2011
Score = 26.9 bits (58), Expect = 6.8
Identities = 40/144 (27%), Positives = 50/144 (34%), Gaps = 21/144 (14%)
Query: 18 RGASRPSGAESYSELLSSR--PASPRGASFSAEPRPRASLPPPRPARPSHLLWPKRLPGR 75
R S P E + SS P SP+ S P P PA SH + +
Sbjct: 401 RDRSPPKSPEKLPQSSSSESSPPSPQPTKVSRHASSSPESPKPAPAPGSH----REISSS 456
Query: 76 P-------GRAPGDRRAALPPP----GTRSPFARAAAELGPSYQQIAGLRRRPVSHSPAH 124
P GRA D+ + P +RSP A A+ G S + R S SP
Sbjct: 457 PTSKNRSHGRAKRDKSHSHTPSRRMGRSRSP---ATAKRGRSRSRTPTKRGHSRSRSPQW 513
Query: 125 ERPSPASSAAAS-ARTSRGDSGDP 147
R A S + RG S P
Sbjct: 514 RRSRSAQRWGRSRSPQRRGRSRSP 537
>gi|169207312 PREDICTED: hypothetical protein [Homo sapiens]
Length = 414
Score = 44.3 bits (103), Expect = 4e-05
Identities = 45/146 (30%), Positives = 59/146 (40%), Gaps = 19/146 (13%)
Query: 9 RAGRGPWIIRGASRPSGAESYSELLSSRPASPRGASFSAEPRPRASLPPPRPARPSHLLW 68
R GRGP G E++ L + R PR AS S PRA+L +P
Sbjct: 56 RCGRGP--AHSPDPGEGCEAWRRLSADR--WPRPASLS----PRAALASAPGQKPQ---- 103
Query: 69 PKRLPGRPGRAPGDRRAALPPPGTRSPFARAAAELGPSYQQIAGLRRRPVSHSPAHERPS 128
P R + P PPP R ++A + + G+R S P P
Sbjct: 104 ----PARQAQLPRPVSGVRPPPRGRVGLSQAPGRPLGACARAKGIRLVNPS-PPRPPEPI 158
Query: 129 PASSAAASARTSRG--DSGDPGPEAG 152
PAS+A S T+RG S PGP+ G
Sbjct: 159 PASAAVTSGLTARGPNTSATPGPQKG 184
>gi|239750650 PREDICTED: hypothetical protein [Homo sapiens]
Length = 414
Score = 44.3 bits (103), Expect = 4e-05
Identities = 45/146 (30%), Positives = 59/146 (40%), Gaps = 19/146 (13%)
Query: 9 RAGRGPWIIRGASRPSGAESYSELLSSRPASPRGASFSAEPRPRASLPPPRPARPSHLLW 68
R GRGP G E++ L + R PR AS S PRA+L +P
Sbjct: 56 RCGRGP--AHSPDPGEGCEAWRRLSADR--WPRPASLS----PRAALASAPGQKPQ---- 103
Query: 69 PKRLPGRPGRAPGDRRAALPPPGTRSPFARAAAELGPSYQQIAGLRRRPVSHSPAHERPS 128
P R + P PPP R ++A + + G+R S P P
Sbjct: 104 ----PARQAQLPRPVSGVRPPPRGRVGLSQAPGRPLGACARAKGIRLVNPS-PPRPPEPI 158
Query: 129 PASSAAASARTSRG--DSGDPGPEAG 152
PAS+A S T+RG S PGP+ G
Sbjct: 159 PASAAVTSGLTARGPNTSATPGPQKG 184
>gi|89037350 PREDICTED: hypothetical protein [Homo sapiens]
Length = 414
Score = 44.3 bits (103), Expect = 4e-05
Identities = 45/146 (30%), Positives = 59/146 (40%), Gaps = 19/146 (13%)
Query: 9 RAGRGPWIIRGASRPSGAESYSELLSSRPASPRGASFSAEPRPRASLPPPRPARPSHLLW 68
R GRGP G E++ L + R PR AS S PRA+L +P
Sbjct: 56 RCGRGP--AHSPDPGEGCEAWRRLSADR--WPRPASLS----PRAALASAPGQKPQ---- 103
Query: 69 PKRLPGRPGRAPGDRRAALPPPGTRSPFARAAAELGPSYQQIAGLRRRPVSHSPAHERPS 128
P R + P PPP R ++A + + G+R S P P
Sbjct: 104 ----PARQAQLPRPVSGVRPPPRGRVGLSQAPGRPLGACARAKGIRLVNPS-PPRPPEPI 158
Query: 129 PASSAAASARTSRG--DSGDPGPEAG 152
PAS+A S T+RG S PGP+ G
Sbjct: 159 PASAAVTSGLTARGPNTSATPGPQKG 184
>gi|13376335 hypothetical protein LOC79946 [Homo sapiens]
Length = 257
Score = 44.3 bits (103), Expect = 4e-05
Identities = 44/149 (29%), Positives = 61/149 (40%), Gaps = 5/149 (3%)
Query: 7 AGRAGRGPWIIRGASRPSGAESYSEL--LSSRPASPRGASFSAEPRPRASLPPPRPARPS 64
A AG G +R + RP G + S RP P G + PRP A PP +R
Sbjct: 85 ASAAGPGA-CMRASGRPHGNTTASTAPPRHPRPRRPGGPALRPTPRPCAGPAPPPASRDC 143
Query: 65 HLLWPKRLPGRPGRAPGDRRAALPPPGTRSPFARAAAELGPSYQQIAGLRRRPVSHSPAH 124
P+R P R GR G R A P + ++ A L AG + +PA
Sbjct: 144 RCRRPRRWP-RAGRR-GRRAGACKPSCAGAAWSARGAPLCSYRTSCAGSCGARTAPTPAP 201
Query: 125 ERPSPASSAAASARTSRGDSGDPGPEAGA 153
SP+++A++ R R S +GA
Sbjct: 202 TCASPSAAASSCCRRRRACSSPTTAWSGA 230
>gi|50428940 mediator complex subunit 25 [Homo sapiens]
Length = 747
Score = 43.9 bits (102), Expect = 5e-05
Identities = 39/145 (26%), Positives = 61/145 (42%), Gaps = 9/145 (6%)
Query: 16 IIRGASRPSGAESYSELLSSR------PASPRGASFSAEPRPRASLPPPRPARPSHLLWP 69
++RG P G S L S+ PA+P GA+ SA P+ PP+ P +L
Sbjct: 222 LVRGLVLPVGGGSAPGPLQSKQPVPLPPAAPSGATLSAAPQQPLPPVPPQYQVPGNLSAA 281
Query: 70 KRLPGRPGRAPGDRRAALPPP-GTRSPFARAAAELGPSYQQIAGLRRRPVSHSPAHERPS 128
+ A +++A L P +P +AA +GP + Q + P P +P
Sbjct: 282 QVAAQNAVEAAKNQKAGLGPRFSPITPLQQAAPGVGPPFSQAPAPQLPP--GPPGAPKPP 339
Query: 129 PASSAAASARTSRGDSGDPGPEAGA 153
PAS + + + G P + GA
Sbjct: 340 PASQPSLVSTVAPGSGLAPTAQPGA 364
Score = 29.3 bits (64), Expect = 1.4
Identities = 35/106 (33%), Positives = 42/106 (39%), Gaps = 22/106 (20%)
Query: 11 GRGPWIIRGASRPSGAESYSELLSSRPASPR-----GASFS---------AEPRPRASLP 56
G GP I+ +RPS LL RP P+ GAS + A+P P A
Sbjct: 567 GLGP-ILEDQARPS-----QNLLQLRPPQPQPQGTVGASGATGQPQPQGTAQPPPGAPQG 620
Query: 57 PPRPARPSHLLWPKRLPGRPGRAPGDRRAAL--PPPGTRSPFARAA 100
PP A P P PG P R L PPP T P +A+
Sbjct: 621 PPGAASGPPPPGPILRPQNPGANPQLRSLLLNPPPPQTGVPPPQAS 666
>gi|239748752 PREDICTED: hypothetical protein XP_002346787 [Homo
sapiens]
Length = 278
Score = 43.5 bits (101), Expect = 7e-05
Identities = 39/114 (34%), Positives = 49/114 (42%), Gaps = 11/114 (9%)
Query: 39 SPRGASFSAEPRPRASLPPPRPARPSHLLWPKRLPGRPGRAPGDRRAALPPPGTRSPFAR 98
+P ++ +A PRPR PP A PS PKR P P RAP A P P +R
Sbjct: 66 APAASAETALPRPRE--PPEPGAGPS----PKRSP--PPRAPRASSLAAPEPQVGDWTSR 117
Query: 99 AAAELGPSYQQIAGLRRRPVSHSPAHERPSPASSAAASARTSRGDSGDPGPEAG 152
GP + G RRR S S + P + + A G + GPEAG
Sbjct: 118 EGRRGGPC---LPGARRRLFSLSVSRSSGPPRARSCAPHPAREGMATTRGPEAG 168
>gi|237757310 synaptojanin 1 isoform a [Homo sapiens]
Length = 1612
Score = 43.1 bits (100), Expect = 9e-05
Identities = 40/136 (29%), Positives = 52/136 (38%), Gaps = 24/136 (17%)
Query: 18 RGASRPSGAES-YSELLSSRPASPRGASFSAEPRPRASLPPPRPARPSHLLWPKRLPGRP 76
R SR G S S + ++PA+P A+P PPPRP P P R P P
Sbjct: 1109 RAPSRTPGPPSAQSSPIDAQPATPLPQKDPAQPLEPKRPPPPRPVAP-----PTR-PAPP 1162
Query: 77 GRAPGDRRAALPPPGTRSPFARAAAELGPSYQQIAGLRRRPVSHSPAHERPSPASSAAAS 136
R P PP G RSP P+ ++ G+ P E +P S +
Sbjct: 1163 QRPP-------PPSGARSP--------APTRKEFGGIGAPPSPGVARREMEAPKS--PGT 1205
Query: 137 ARTSRGDSGDPGPEAG 152
R P P+AG
Sbjct: 1206 TRKDNIGRSQPSPQAG 1221
>gi|237757308 synaptojanin 1 isoform b [Homo sapiens]
Length = 1350
Score = 43.1 bits (100), Expect = 9e-05
Identities = 40/136 (29%), Positives = 52/136 (38%), Gaps = 24/136 (17%)
Query: 18 RGASRPSGAES-YSELLSSRPASPRGASFSAEPRPRASLPPPRPARPSHLLWPKRLPGRP 76
R SR G S S + ++PA+P A+P PPPRP P P R P P
Sbjct: 1109 RAPSRTPGPPSAQSSPIDAQPATPLPQKDPAQPLEPKRPPPPRPVAP-----PTR-PAPP 1162
Query: 77 GRAPGDRRAALPPPGTRSPFARAAAELGPSYQQIAGLRRRPVSHSPAHERPSPASSAAAS 136
R P PP G RSP P+ ++ G+ P E +P S +
Sbjct: 1163 QRPP-------PPSGARSP--------APTRKEFGGIGAPPSPGVARREMEAPKS--PGT 1205
Query: 137 ARTSRGDSGDPGPEAG 152
R P P+AG
Sbjct: 1206 TRKDNIGRSQPSPQAG 1221
>gi|110832843 TBP-associated factor 4 [Homo sapiens]
Length = 1085
Score = 43.1 bits (100), Expect = 9e-05
Identities = 50/161 (31%), Positives = 62/161 (38%), Gaps = 17/161 (10%)
Query: 3 LELRAGRA---GRGPWIIRGASRPSGA------ESYSELLSSRPASPRGASFSAEPRPRA 53
L RAG G GP G +P+G + LL+S A+ S P A
Sbjct: 166 LAARAGPGPGPGPGPGPGPGPGKPAGPGAAQTLNGSAALLNSHHAAAPAVSL-VNNGPAA 224
Query: 54 SLPPPRPARPSHLLWPKRLPGRPGRAPGDRRAALPPPGTRSPFARAAAELGPSYQQIAGL 113
LP P+PA P ++ + P G A AA PP +P A AAA P
Sbjct: 225 LLPLPKPAAPGTVI---QTPPFVGAAAPPAPAAPSPPAAPAPAAPAAAP--PPPPPAPAT 279
Query: 114 RRRPVSH--SPAHERPSPASSAAASARTSRGDSGDPGPEAG 152
RP H P P+ AAA S G + P P AG
Sbjct: 280 LARPPGHPAGPPTAAPAVPPPAAAQNGGSAGAAPAPAPAAG 320
Score = 42.0 bits (97), Expect = 2e-04
Identities = 41/117 (35%), Positives = 49/117 (41%), Gaps = 33/117 (28%)
Query: 37 PASPRGASFSAEPRPRASLPPPRPARPSHLLWPKRLPGRPGRAPGDRRAALPPPGTRSPF 96
PA+P + A P A+ PPP PA P+ L P PG P P A+PPP
Sbjct: 252 PAAPSPPAAPAPAAPAAAPPPPPPA-PATLARP---PGHPA-GPPTAAPAVPPP------ 300
Query: 97 ARAAAELGPSYQQIAGLRRRPVSHSPAHERPSPASSAAASARTSRGDSGDPGPEAGA 153
AAA+ G S A P+PA +A A G SG PGP A A
Sbjct: 301 --AAAQNGGS----------------AGAAPAPAPAAGGPA----GVSGQPGPGAAA 335
Score = 40.4 bits (93), Expect = 6e-04
Identities = 53/159 (33%), Positives = 66/159 (41%), Gaps = 34/159 (21%)
Query: 4 ELRAGRAGR-GPWIIRGASRPSGAESYSELLSSRPASPRGASFSAEPRPRASLPPPRPAR 62
E+RA AG G ++ G+ P+GA + PA+P + A P P PP AR
Sbjct: 49 EVRAAAAGALGNHVVSGS--PAGAAG------AGPAAPAEGAPGAAPEP----PPAGRAR 96
Query: 63 PSHLLWPKRLPGRPGRAPGDRRAALPPPGTRSPFARAAAELGPSYQQIAGLRRRPVSHS- 121
P P RPG P R L P G P AA+L P + AG PV +
Sbjct: 97 PGG-----GGPQRPG--PPSPRRPLVPAGPAPP----AAKLRPPPEGSAG-SCAPVPAAA 144
Query: 122 -------PAHERPS-PASSAAASARTSRGDSGDPGPEAG 152
PA P+ PA AA +AR G PGP G
Sbjct: 145 AVAAGPEPAPAGPAKPAGPAALAARAGPGPGPGPGPGPG 183
Score = 38.9 bits (89), Expect = 0.002
Identities = 34/108 (31%), Positives = 41/108 (37%), Gaps = 15/108 (13%)
Query: 7 AGRAGRGPWIIRGASRPSGAESYSELLSSRPASP--------RGASFSAEPRPRASL--- 55
AGRA G G RP L+ + PA P G++ S P P A+
Sbjct: 92 AGRARPGGG---GPQRPGPPSPRRPLVPAGPAPPAAKLRPPPEGSAGSCAPVPAAAAVAA 148
Query: 56 -PPPRPARPSHLLWPKRLPGRPGRAPGDRRAALPPPGTRSPFARAAAE 102
P P PA P+ P L R G PG P PG P AA+
Sbjct: 149 GPEPAPAGPAKPAGPAALAARAGPGPGPGPGPGPGPGPGKPAGPGAAQ 196
Score = 33.9 bits (76), Expect = 0.056
Identities = 34/125 (27%), Positives = 45/125 (36%), Gaps = 21/125 (16%)
Query: 34 SSRPASPRGASFSAEPRPRA--SLPPPRPARPSHLLWPKRLPGRP--------------- 76
++ P +P S A P P A + PPP P P+ L P P P
Sbjct: 246 AAAPPAPAAPSPPAAPAPAAPAAAPPPPPPAPATLARPPGHPAGPPTAAPAVPPPAAAQN 305
Query: 77 ----GRAPGDRRAALPPPGTRSPFARAAAELGPSYQQIAGLRRRPVSHSPAHERPSPASS 132
G AP AA P G AA P+ A +R V +P + AS
Sbjct: 306 GGSAGAAPAPAPAAGGPAGVSGQPGPGAAAAAPAPGVKAESPKRVVQAAPPAAQTLAASG 365
Query: 133 AAASA 137
A++A
Sbjct: 366 PASTA 370
Score = 26.9 bits (58), Expect = 6.8
Identities = 27/96 (28%), Positives = 40/96 (41%), Gaps = 5/96 (5%)
Query: 7 AGRAGR-GPWIIRGASRPS-GAESYSELLSSRPASPRGASFSAEPRPRASL---PPPRPA 61
AG +G+ GP A P AES ++ + P + + + S AS+ P + A
Sbjct: 323 AGVSGQPGPGAAAAAPAPGVKAESPKRVVQAAPPAAQTLAASGPASTAASMVIGPTMQGA 382
Query: 62 RPSHLLWPKRLPGRPGRAPGDRRAALPPPGTRSPFA 97
PS P PG P P A+ +R+P A
Sbjct: 383 LPSPAAVPPPAPGTPTGLPKGAAGAVTQSLSRTPTA 418
>gi|190014636 hypothetical protein LOC286262 isoform 2 [Homo
sapiens]
Length = 678
Score = 43.1 bits (100), Expect = 9e-05
Identities = 38/121 (31%), Positives = 44/121 (36%), Gaps = 16/121 (13%)
Query: 37 PASPRGASFSAEPRPRASLPPPRPARPSHLLWPKRLPGRPGRAPGDRRAALPPPGTRSPF 96
PA+PR RP PPP P RP P P P APG R P RS F
Sbjct: 82 PAAPRRRGSPERARPPPPPPPPAPPRP-----PPAAPSPPA-APGPRGGGASPGARRSDF 135
Query: 97 ARAAAELG-----PSYQQIAGLRRRPVSHSPAHERPSPASSAAASARTS-----RGDSGD 146
+ + AG R HS R PA+ A S S + +SGD
Sbjct: 136 LQKTGSNSFTVHPRGLHRGAGARLLSNGHSAPEPRAGPANRLAGSPPGSGQWKPKVESGD 195
Query: 147 P 147
P
Sbjct: 196 P 196
Score = 26.9 bits (58), Expect = 6.8
Identities = 30/112 (26%), Positives = 39/112 (34%), Gaps = 25/112 (22%)
Query: 55 LPPPRPARPSHLLWPKRLPGRPGRAPGDRRAAL---------PPPGTRSPFARAAAELGP 105
+P R R +L + +PG P P A + PPG S L
Sbjct: 25 VPGVRALRADSVLIIETVPGFPPAPPAPGAAQIRAAEVLVYGAPPGRVS-------RLLE 77
Query: 106 SYQQIAGLRRR---------PVSHSPAHERPSPASSAAASARTSRGDSGDPG 148
+ A RRR P PA RP PA+ + +A RG PG
Sbjct: 78 RFDPPAAPRRRGSPERARPPPPPPPPAPPRPPPAAPSPPAAPGPRGGGASPG 129
>gi|190014638 hypothetical protein LOC286262 isoform 1 [Homo
sapiens]
Length = 650
Score = 43.1 bits (100), Expect = 9e-05
Identities = 38/121 (31%), Positives = 44/121 (36%), Gaps = 16/121 (13%)
Query: 37 PASPRGASFSAEPRPRASLPPPRPARPSHLLWPKRLPGRPGRAPGDRRAALPPPGTRSPF 96
PA+PR RP PPP P RP P P P APG R P RS F
Sbjct: 82 PAAPRRRGSPERARPPPPPPPPAPPRP-----PPAAPSPPA-APGPRGGGASPGARRSDF 135
Query: 97 ARAAAELG-----PSYQQIAGLRRRPVSHSPAHERPSPASSAAASARTS-----RGDSGD 146
+ + AG R HS R PA+ A S S + +SGD
Sbjct: 136 LQKTGSNSFTVHPRGLHRGAGARLLSNGHSAPEPRAGPANRLAGSPPGSGQWKPKVESGD 195
Query: 147 P 147
P
Sbjct: 196 P 196
Score = 26.9 bits (58), Expect = 6.8
Identities = 30/112 (26%), Positives = 39/112 (34%), Gaps = 25/112 (22%)
Query: 55 LPPPRPARPSHLLWPKRLPGRPGRAPGDRRAAL---------PPPGTRSPFARAAAELGP 105
+P R R +L + +PG P P A + PPG S L
Sbjct: 25 VPGVRALRADSVLIIETVPGFPPAPPAPGAAQIRAAEVLVYGAPPGRVS-------RLLE 77
Query: 106 SYQQIAGLRRR---------PVSHSPAHERPSPASSAAASARTSRGDSGDPG 148
+ A RRR P PA RP PA+ + +A RG PG
Sbjct: 78 RFDPPAAPRRRGSPERARPPPPPPPPAPPRPPPAAPSPPAAPGPRGGGASPG 129
>gi|33286446 opioid growth factor receptor [Homo sapiens]
Length = 677
Score = 41.2 bits (95), Expect = 3e-04
Identities = 36/120 (30%), Positives = 43/120 (35%), Gaps = 10/120 (8%)
Query: 22 RPSG------AESYSELLSSRPASPRGASFSAEPRPRASLPPPRPARPSHLLWPKRLPG- 74
RP+G AES SE RPA P G + P P P R P PG
Sbjct: 545 RPAGPAGDEPAESPSETPGPRPAGPAGDEPAESPSETPGPSPAGPTRDEPAESPSETPGP 604
Query: 75 RPGRAPGDRRAALPPPGTRSPFARAAAELGPSYQQIAGLRRRPVSHSPAHERPSPASSAA 134
RP GD A P + +P R A G + P P + P+ A AA
Sbjct: 605 RPAGPAGDEPAESP---SETPGPRPAGPAGDEPAESPSETPGPSPAGPTRDEPAKAGEAA 661
Score = 40.0 bits (92), Expect = 8e-04
Identities = 39/132 (29%), Positives = 52/132 (39%), Gaps = 16/132 (12%)
Query: 19 GASRPSGAESYSELLSSRPASPRGASFSAEPRPRASLPPPRPARPSHLLWPKRLPGRPGR 78
G + AES SE RPA P G + P + P PRPA P+ P
Sbjct: 528 GPAGDEPAESPSETPGPRPAGPAGDEPAESP---SETPGPRPAGPA--------GDEPAE 576
Query: 79 APGDRRAALPPPGTRSPFARAAAEL-GPSYQQIAGLRRRPVSHSPAHERPSPASSAAASA 137
+P + P TR A + +E GP + AG + SP+ E P P + A
Sbjct: 577 SPSETPGPSPAGPTRDEPAESPSETPGP---RPAGPAGDEPAESPS-ETPGPRPAGPAGD 632
Query: 138 RTSRGDSGDPGP 149
+ S PGP
Sbjct: 633 EPAESPSETPGP 644
Score = 35.8 bits (81), Expect = 0.015
Identities = 30/87 (34%), Positives = 37/87 (42%), Gaps = 13/87 (14%)
Query: 19 GASRPSGAESYSELLSSRPASPRGASFSAEPRPRASLPPPRPARPSHLLWPKRLPGRPGR 78
G +R AES SE RPA P G + P + P PRPA P+ P
Sbjct: 588 GPTRDEPAESPSETPGPRPAGPAGDEPAESP---SETPGPRPAGPA--------GDEPAE 636
Query: 79 APGDRRAALPPPGTRSPFARA--AAEL 103
+P + P TR A+A AAEL
Sbjct: 637 SPSETPGPSPAGPTRDEPAKAGEAAEL 663
>gi|239754327 PREDICTED: chromosome 6 open reading frame 132 [Homo
sapiens]
Length = 1188
Score = 41.2 bits (95), Expect = 3e-04
Identities = 36/110 (32%), Positives = 47/110 (42%), Gaps = 21/110 (19%)
Query: 31 ELLSSRPASPRGASFSAEPRPRASLPPPRPARPSHLLWPKRLPGRPGRAPGDRRAALPPP 90
EL ++ PASPR ++ RA PPP P P P P P P LPP
Sbjct: 365 ELKATAPASPRLGQSQSQADERAGTPPPAPPLP-----PPAPPLPPPAPP------LPPA 413
Query: 91 GTRSPFARAAAELGPSYQQIAGLRRRPVSHSPA----HERPSPASSAAAS 136
P A+ AA AG + P S SPA PSP ++A+++
Sbjct: 414 APPLPCAQKAA------HPPAGFTKTPKSSSPALKPKPNPPSPENTASSA 457
Score = 32.7 bits (73), Expect = 0.12
Identities = 33/127 (25%), Positives = 50/127 (39%), Gaps = 28/127 (22%)
Query: 37 PASPRGASFSAEPRPRAS------LPPPRPARPSHL------LWPKRLPGRPGRAPGDRR 84
PA P+G++ P P + +PPP P R S + P++ G +AP R
Sbjct: 280 PAEPKGSALGPNPEPHLTFPRSFKVPPPTPVRTSSIPVQEAQEAPRKEEGATKKAPS--R 337
Query: 85 AALPPPGTRSPFARAAAELGPSYQQIAGLRRRPVSHSPAHERPSPASSAAASARTSRGD- 143
LPP S R A+++ P R P P + + +S S+ D
Sbjct: 338 LPLPP----SFHIRPASQVYPD--------RAPEPDCPGELKATAPASPRLGQSQSQADE 385
Query: 144 -SGDPGP 149
+G P P
Sbjct: 386 RAGTPPP 392
Score = 28.1 bits (61), Expect = 3.1
Identities = 29/99 (29%), Positives = 34/99 (34%), Gaps = 11/99 (11%)
Query: 11 GRGPWIIRGASRPSGAESYSELLSSRPASPRGASFSAEPRPRASLPPPRP-----ARPSH 65
G P + S P G S+ P P EP P S+ PP P P H
Sbjct: 145 GPAPGPPQDISEPPGGSPLPSPPSTAPPPP---PLLLEPPPPPSMAPPPPPVLEALSPPH 201
Query: 66 LLWPKRLPGRPG---RAPGDRRAALPPPGTRSPFARAAA 101
L +P P AP A PPP +P A A
Sbjct: 202 TLSSPSIPTPPDFIPPAPPLAFLAPPPPPVPAPAPPAPA 240
Score = 28.1 bits (61), Expect = 3.1
Identities = 39/138 (28%), Positives = 50/138 (36%), Gaps = 19/138 (13%)
Query: 33 LSSRPASPR---------GASFSAEPRPRASLPPPRPAR--PSHLLWPKRLPGRPGRAPG 81
+ S P PR GA +P A PP+ P+ L PK + G
Sbjct: 586 IGSLPPKPRLEGGRICENGADDDKLSKPVAKNLPPQSTTLLPTTSLQPKAMLGPAIPPKA 645
Query: 82 DRRAALPPPGTRSPFARAAAELGPSYQQIAGLRRRPVSHSPAHERPSPASSAAASART-- 139
A+PP T P A LGP+ A P + A P+ AS+A T
Sbjct: 646 TPEPAIPPKATLWPATPPKATLGPATPLKA--TSGPTTPLKATSGPAIASTATTLPTTTS 703
Query: 140 ---SRGDSGDPG-PEAGA 153
+ DSG G PE A
Sbjct: 704 QLMAEKDSGPAGQPEKPA 721
>gi|239748855 PREDICTED: chromosome 6 open reading frame 132 [Homo
sapiens]
Length = 1188
Score = 41.2 bits (95), Expect = 3e-04
Identities = 36/110 (32%), Positives = 47/110 (42%), Gaps = 21/110 (19%)
Query: 31 ELLSSRPASPRGASFSAEPRPRASLPPPRPARPSHLLWPKRLPGRPGRAPGDRRAALPPP 90
EL ++ PASPR ++ RA PPP P P P P P P LPP
Sbjct: 365 ELKATAPASPRLGQSQSQADERAGTPPPAPPLP-----PPAPPLPPPAPP------LPPA 413
Query: 91 GTRSPFARAAAELGPSYQQIAGLRRRPVSHSPA----HERPSPASSAAAS 136
P A+ AA AG + P S SPA PSP ++A+++
Sbjct: 414 APPLPCAQKAA------HPPAGFTKTPKSSSPALKPKPNPPSPENTASSA 457
Score = 32.7 bits (73), Expect = 0.12
Identities = 33/127 (25%), Positives = 50/127 (39%), Gaps = 28/127 (22%)
Query: 37 PASPRGASFSAEPRPRAS------LPPPRPARPSHL------LWPKRLPGRPGRAPGDRR 84
PA P+G++ P P + +PPP P R S + P++ G +AP R
Sbjct: 280 PAEPKGSALGPNPEPHLTFPRSFKVPPPTPVRTSSIPVQEAQEAPRKEEGATKKAPS--R 337
Query: 85 AALPPPGTRSPFARAAAELGPSYQQIAGLRRRPVSHSPAHERPSPASSAAASARTSRGD- 143
LPP S R A+++ P R P P + + +S S+ D
Sbjct: 338 LPLPP----SFHIRPASQVYPD--------RAPEPDCPGELKATAPASPRLGQSQSQADE 385
Query: 144 -SGDPGP 149
+G P P
Sbjct: 386 RAGTPPP 392
Score = 28.1 bits (61), Expect = 3.1
Identities = 29/99 (29%), Positives = 34/99 (34%), Gaps = 11/99 (11%)
Query: 11 GRGPWIIRGASRPSGAESYSELLSSRPASPRGASFSAEPRPRASLPPPRP-----ARPSH 65
G P + S P G S+ P P EP P S+ PP P P H
Sbjct: 145 GPAPGPPQDISEPPGGSPLPSPPSTAPPPP---PLLLEPPPPPSMAPPPPPVLEALSPPH 201
Query: 66 LLWPKRLPGRPG---RAPGDRRAALPPPGTRSPFARAAA 101
L +P P AP A PPP +P A A
Sbjct: 202 TLSSPSIPTPPDFIPPAPPLAFLAPPPPPVPAPAPPAPA 240
Score = 28.1 bits (61), Expect = 3.1
Identities = 39/138 (28%), Positives = 50/138 (36%), Gaps = 19/138 (13%)
Query: 33 LSSRPASPR---------GASFSAEPRPRASLPPPRPAR--PSHLLWPKRLPGRPGRAPG 81
+ S P PR GA +P A PP+ P+ L PK + G
Sbjct: 586 IGSLPPKPRLEGGRICENGADDDKLSKPVAKNLPPQSTTLLPTTSLQPKAMLGPAIPPKA 645
Query: 82 DRRAALPPPGTRSPFARAAAELGPSYQQIAGLRRRPVSHSPAHERPSPASSAAASART-- 139
A+PP T P A LGP+ A P + A P+ AS+A T
Sbjct: 646 TPEPAIPPKATLWPATPPKATLGPATPLKA--TSGPTTPLKATSGPAIASTATTLPTTTS 703
Query: 140 ---SRGDSGDPG-PEAGA 153
+ DSG G PE A
Sbjct: 704 QLMAEKDSGPAGQPEKPA 721
>gi|239742884 PREDICTED: hypothetical protein LOC647024 [Homo
sapiens]
Length = 1188
Score = 41.2 bits (95), Expect = 3e-04
Identities = 36/110 (32%), Positives = 47/110 (42%), Gaps = 21/110 (19%)
Query: 31 ELLSSRPASPRGASFSAEPRPRASLPPPRPARPSHLLWPKRLPGRPGRAPGDRRAALPPP 90
EL ++ PASPR ++ RA PPP P P P P P P LPP
Sbjct: 365 ELKATAPASPRLGQSQSQADERAGTPPPAPPLP-----PPAPPLPPPAPP------LPPA 413
Query: 91 GTRSPFARAAAELGPSYQQIAGLRRRPVSHSPA----HERPSPASSAAAS 136
P A+ AA AG + P S SPA PSP ++A+++
Sbjct: 414 APPLPCAQKAA------HPPAGFTKTPKSSSPALKPKPNPPSPENTASSA 457
Score = 32.7 bits (73), Expect = 0.12
Identities = 33/127 (25%), Positives = 50/127 (39%), Gaps = 28/127 (22%)
Query: 37 PASPRGASFSAEPRPRAS------LPPPRPARPSHL------LWPKRLPGRPGRAPGDRR 84
PA P+G++ P P + +PPP P R S + P++ G +AP R
Sbjct: 280 PAEPKGSALGPNPEPHLTFPRSFKVPPPTPVRTSSIPVQEAQEAPRKEEGATKKAPS--R 337
Query: 85 AALPPPGTRSPFARAAAELGPSYQQIAGLRRRPVSHSPAHERPSPASSAAASARTSRGD- 143
LPP S R A+++ P R P P + + +S S+ D
Sbjct: 338 LPLPP----SFHIRPASQVYPD--------RAPEPDCPGELKATAPASPRLGQSQSQADE 385
Query: 144 -SGDPGP 149
+G P P
Sbjct: 386 RAGTPPP 392
Score = 28.1 bits (61), Expect = 3.1
Identities = 29/99 (29%), Positives = 34/99 (34%), Gaps = 11/99 (11%)
Query: 11 GRGPWIIRGASRPSGAESYSELLSSRPASPRGASFSAEPRPRASLPPPRP-----ARPSH 65
G P + S P G S+ P P EP P S+ PP P P H
Sbjct: 145 GPAPGPPQDISEPPGGSPLPSPPSTAPPPP---PLLLEPPPPPSMAPPPPPVLEALSPPH 201
Query: 66 LLWPKRLPGRPG---RAPGDRRAALPPPGTRSPFARAAA 101
L +P P AP A PPP +P A A
Sbjct: 202 TLSSPSIPTPPDFIPPAPPLAFLAPPPPPVPAPAPPAPA 240
Score = 28.1 bits (61), Expect = 3.1
Identities = 39/138 (28%), Positives = 50/138 (36%), Gaps = 19/138 (13%)
Query: 33 LSSRPASPR---------GASFSAEPRPRASLPPPRPAR--PSHLLWPKRLPGRPGRAPG 81
+ S P PR GA +P A PP+ P+ L PK + G
Sbjct: 586 IGSLPPKPRLEGGRICENGADDDKLSKPVAKNLPPQSTTLLPTTSLQPKAMLGPAIPPKA 645
Query: 82 DRRAALPPPGTRSPFARAAAELGPSYQQIAGLRRRPVSHSPAHERPSPASSAAASART-- 139
A+PP T P A LGP+ A P + A P+ AS+A T
Sbjct: 646 TPEPAIPPKATLWPATPPKATLGPATPLKA--TSGPTTPLKATSGPAIASTATTLPTTTS 703
Query: 140 ---SRGDSGDPG-PEAGA 153
+ DSG G PE A
Sbjct: 704 QLMAEKDSGPAGQPEKPA 721
>gi|109715839 adherens junction associated protein 1 [Homo sapiens]
Length = 411
Score = 40.8 bits (94), Expect = 5e-04
Identities = 41/155 (26%), Positives = 65/155 (41%), Gaps = 9/155 (5%)
Query: 1 MWLELRAGRAGRGPWIIRGASRPSGAESYSELLSSRPASPRGASFSAEPRPRASLPPPRP 60
MW++ G + IR RP G+ ++ + + A A + P P L P P
Sbjct: 1 MWIQQLLGLSSMS---IRWPGRPLGSHAWILIAMFQLAVDLPACEALGPGPEFWLLPRSP 57
Query: 61 ARPSHLLWPKRLPGRPGRAPGDRRAALPPPGTR----SPFARAAAELGPSYQQIAGLRRR 116
RP LW R G+P R P + PP R RA P Q A + +
Sbjct: 58 PRPPR-LWSFR-SGQPARVPAPVWSPRPPRVERIHGQMQMPRARRAHRPRDQAAALVPKA 115
Query: 117 PVSHSPAHERPSPASSAAASARTSRGDSGDPGPEA 151
++ PA + SP+ ++++S+ +S G P +A
Sbjct: 116 GLAKPPAAAKSSPSLASSSSSSSSAVAGGAPEQQA 150
>gi|9055278 adherens junction associated protein 1 [Homo sapiens]
Length = 411
Score = 40.8 bits (94), Expect = 5e-04
Identities = 41/155 (26%), Positives = 65/155 (41%), Gaps = 9/155 (5%)
Query: 1 MWLELRAGRAGRGPWIIRGASRPSGAESYSELLSSRPASPRGASFSAEPRPRASLPPPRP 60
MW++ G + IR RP G+ ++ + + A A + P P L P P
Sbjct: 1 MWIQQLLGLSSMS---IRWPGRPLGSHAWILIAMFQLAVDLPACEALGPGPEFWLLPRSP 57
Query: 61 ARPSHLLWPKRLPGRPGRAPGDRRAALPPPGTR----SPFARAAAELGPSYQQIAGLRRR 116
RP LW R G+P R P + PP R RA P Q A + +
Sbjct: 58 PRPPR-LWSFR-SGQPARVPAPVWSPRPPRVERIHGQMQMPRARRAHRPRDQAAALVPKA 115
Query: 117 PVSHSPAHERPSPASSAAASARTSRGDSGDPGPEA 151
++ PA + SP+ ++++S+ +S G P +A
Sbjct: 116 GLAKPPAAAKSSPSLASSSSSSSSAVAGGAPEQQA 150
>gi|209977046 fibrous sheath CABYR binding protein [Homo sapiens]
Length = 825
Score = 40.4 bits (93), Expect = 6e-04
Identities = 32/117 (27%), Positives = 48/117 (41%), Gaps = 11/117 (9%)
Query: 23 PSGAESYSELLSSRPASPRGASFSAEPRPRASLPPPRPARPSHLLWPKRLPGRPGRAPGD 82
PSG E+ +E S+ SAE P PPP P+ + P AP +
Sbjct: 579 PSGEETTAEEASAAIQLLAATEASAEEAPAEVQPPPAEEAPAEV-----QPPPAEEAPAE 633
Query: 83 RRAALPPPGTRSPFARAAAELGPSYQQIAGLRRRPVSHSPAHERPSPASSAAASART 139
PPP +P A + P+ + A ++ P +PA +P PA A A ++
Sbjct: 634 ---VQPPPAEEAP---AEVQPPPAEEAPAEVQPPPAEEAPAEVQPPPAEEAPAEVQS 684
Score = 30.8 bits (68), Expect = 0.47
Identities = 25/89 (28%), Positives = 33/89 (37%), Gaps = 12/89 (13%)
Query: 51 PRASLPPPRPARPSHLLWPKRLPGRPGRAPGDRRAA--LPPPGTRSPFARAAAELGPSYQ 108
P PP PS L + LP +P + A LPPP AE PS +
Sbjct: 330 PAEIQPPSAEESPSVELLAEILPPSAEESPSEEPPAEILPPP----------AEKSPSVE 379
Query: 109 QIAGLRRRPVSHSPAHERPSPASSAAASA 137
+ +R +P +P PA A A
Sbjct: 380 LLGEIRSPSAQKAPIEVQPLPAEGALEEA 408
>gi|237757312 synaptojanin 1 isoform c [Homo sapiens]
Length = 1295
Score = 40.0 bits (92), Expect = 8e-04
Identities = 45/161 (27%), Positives = 57/161 (35%), Gaps = 14/161 (8%)
Query: 3 LELRAGRA-GRGPWIIRGASRPSGAESYSELLSSRPASPRGASFSAEPRPRAS----LPP 57
L +R RA R P S P A+ + L PA P PRP A PP
Sbjct: 1064 LPIRPSRAPSRTPGPPSAQSSPIDAQPATPLPQKDPAQPLEPKRPPPPRPVAPPTRPAPP 1123
Query: 58 PRPARPSHLLWPKRL------PGRPGRAPGD---RRAALPPPGTRSPFARAAAELGPSYQ 108
RP PS P P PG D R P G P + P+
Sbjct: 1124 QRPPPPSGARSPAPTRKEFGAPKSPGTTRKDNIGRSQPSPQAGLAGPGPAGYSTARPTIP 1183
Query: 109 QIAGLRRRPVSHSPAHERPSPASSAAASARTSRGDSGDPGP 149
AG+ P SH+ A S + ++ TS+G + P P
Sbjct: 1184 PRAGVISAPQSHARASAGRLTPESQSKTSETSKGSTFLPEP 1224
>gi|32996733 Ras association (RalGDS/AF-6) domain family 5 isoform B
[Homo sapiens]
Length = 336
Score = 40.0 bits (92), Expect = 8e-04
Identities = 44/112 (39%), Positives = 46/112 (41%), Gaps = 16/112 (14%)
Query: 20 ASRPSGAESYSELLSSRPASPRGASFSAEPRPRASLPPPRPARPSHLLWPKRLPGRPGRA 79
AS G Y LL P PR + P LPPP P R S L P L PG
Sbjct: 4 ASPAIGQRPYPLLLDPEP--PRYLQSLSGPE----LPPPPPDRSSRLCVPAPLSTAPGAR 57
Query: 80 PG--DRRAA---LPPPGTRSPFARAAAELGPSYQQIAGLRRRPVSHSPAHER 126
G RRAA L PP S R A L P QQ LRRRP + P R
Sbjct: 58 EGRSARRAARGNLEPPPRAS---RPARPLRPGLQQ--RLRRRPGAPRPRDVR 104
>gi|32996731 Ras association (RalGDS/AF-6) domain family 5 isoform A
[Homo sapiens]
Length = 418
Score = 40.0 bits (92), Expect = 8e-04
Identities = 44/112 (39%), Positives = 46/112 (41%), Gaps = 16/112 (14%)
Query: 20 ASRPSGAESYSELLSSRPASPRGASFSAEPRPRASLPPPRPARPSHLLWPKRLPGRPGRA 79
AS G Y LL P PR + P LPPP P R S L P L PG
Sbjct: 4 ASPAIGQRPYPLLLDPEP--PRYLQSLSGPE----LPPPPPDRSSRLCVPAPLSTAPGAR 57
Query: 80 PG--DRRAA---LPPPGTRSPFARAAAELGPSYQQIAGLRRRPVSHSPAHER 126
G RRAA L PP S R A L P QQ LRRRP + P R
Sbjct: 58 EGRSARRAARGNLEPPPRAS---RPARPLRPGLQQ--RLRRRPGAPRPRDVR 104
>gi|239751471 PREDICTED: hypothetical protein XP_002347846 [Homo
sapiens]
Length = 870
Score = 40.0 bits (92), Expect = 8e-04
Identities = 54/158 (34%), Positives = 63/158 (39%), Gaps = 28/158 (17%)
Query: 5 LRAGRAG--------RGP-WIIRGASRPSGAESYSELLSSRPASPRGASFSAEPRPRASL 55
LR RAG RGP W RGA PSG L RP GAS R AS
Sbjct: 439 LRGARAGETTPLGEARGPCWKARGAV-PSGR------LRGRPGRVAGAS----GRRGASQ 487
Query: 56 PPPRPAR-PSHLLWPKRLPGRPGRAPGDRRAALPPPGTRSPFARAAAELGPS----YQQI 110
R P+ L + +PGR G G+ R A P G P ARA E+ + Q +
Sbjct: 488 ARGGTGRAPARLRRGRGMPGRVGNGVGEGRGASEPEGEPEPRARADLEVLQAGFERLQSL 547
Query: 111 AGLRRRPVSHSP---AHERPSPASSAAASARTSRGDSG 145
L R P AH + A AA+AR SG
Sbjct: 548 PELAERLGGRCPGQVAHGVLARAGLLAAAARPGLAGSG 585
Score = 27.7 bits (60), Expect = 4.0
Identities = 20/71 (28%), Positives = 24/71 (33%), Gaps = 6/71 (8%)
Query: 7 AGRAGRGPWIIRGASRPSGAESYSELLSSRPASPRGASFSAEPRPRASLPPPRPARPSHL 66
AGR R W A R PASP + A P PR +
Sbjct: 732 AGRRRRRGWTFAAALRKGAPREQP------PASPAASPCQAPRAPEKETEAPRLRGRATA 785
Query: 67 LWPKRLPGRPG 77
+ P+ LP PG
Sbjct: 786 VAPRPLPAAPG 796
Score = 27.3 bits (59), Expect = 5.2
Identities = 45/164 (27%), Positives = 59/164 (35%), Gaps = 32/164 (19%)
Query: 8 GRAGRGPWIIRGASRPS----GAESYSEL-LSSRPASPRGASFSAEPRPRASLPPPRPAR 62
G G GP + G S P+ GA +SE L+ R RGA A R R R
Sbjct: 689 GLCGPGP-VPGGLSVPTPCGRGAGDFSEADLADRAFPVRGAGPIAGRRRRRGWTFAAALR 747
Query: 63 PSHLLWPKRLPGRPGRAPGDRRAALPPPGTRSPFARAAAELGPSYQ-QIAGLRRRPVSHS 121
G P P AA P R+P A P + + + RP+ +
Sbjct: 748 K----------GAPREQPPASPAASPCQAPRAPEKETEA---PRLRGRATAVAPRPLPAA 794
Query: 122 PAHE-----RPSPASSAAASARTSRGDSGDPG-------PEAGA 153
P +P PA S + +G +G PG P AGA
Sbjct: 795 PGFSGLCVLQPFPARSRGLGVPSQQGPTGSPGCRDRASAPRAGA 838
>gi|239749835 PREDICTED: hypothetical protein XP_002347183 [Homo
sapiens]
Length = 321
Score = 40.0 bits (92), Expect = 8e-04
Identities = 36/104 (34%), Positives = 46/104 (44%), Gaps = 23/104 (22%)
Query: 60 PARPSHLLWPK--RLPGRPGRAP-----GDRR---AALPPPGTRSPFA------RAAAEL 103
P LW + +L G PG AP G R A LPP GT + F RAA
Sbjct: 192 PESLERALWAQSSQLAGGPGLAPRPGASGRGRWVSAPLPPKGTETFFCVLPSALRAALSC 251
Query: 104 GPSYQQIAGLRRRPVSHSPAHERPSPASSAAASARTSRGDSGDP 147
GPS+ + +G R R + RP P S A++ R+ R G P
Sbjct: 252 GPSWGEDSGPRHREL-------RPDPDSRRASAERSPRCPPGSP 288
Score = 37.4 bits (85), Expect = 0.005
Identities = 38/111 (34%), Positives = 51/111 (45%), Gaps = 17/111 (15%)
Query: 6 RAGRAGRGPWIIRGASRPSGAESYSELLSS--RPASPRGASFSAE--PRPRASLPPPRPA 61
R G +GRG W+ P G E++ +L S R A G S+ + PR R P P
Sbjct: 215 RPGASGRGRWV-SAPLPPKGTETFFCVLPSALRAALSCGPSWGEDSGPRHRELRPDPDSR 273
Query: 62 RPSHLLWPKRLPGRPGRAPGDRRAALPPPGTRSPFARAAAELGPSYQQIAG 112
R S P+ PG P +A PG R AR AA LG +++ +AG
Sbjct: 274 RASAERSPRCPPGSPRKA---------GPGRRD--ARGAA-LGGAFRVLAG 312
>gi|239744125 PREDICTED: hypothetical protein XP_002343039 [Homo
sapiens]
Length = 321
Score = 40.0 bits (92), Expect = 8e-04
Identities = 36/104 (34%), Positives = 46/104 (44%), Gaps = 23/104 (22%)
Query: 60 PARPSHLLWPK--RLPGRPGRAP-----GDRR---AALPPPGTRSPFA------RAAAEL 103
P LW + +L G PG AP G R A LPP GT + F RAA
Sbjct: 192 PESLERALWAQSSQLAGGPGLAPRPGASGRGRWVSAPLPPKGTETFFCVLPSALRAALSC 251
Query: 104 GPSYQQIAGLRRRPVSHSPAHERPSPASSAAASARTSRGDSGDP 147
GPS+ + +G R R + RP P S A++ R+ R G P
Sbjct: 252 GPSWGEDSGPRHREL-------RPDPDSRRASAERSPRCPPGSP 288
Score = 37.4 bits (85), Expect = 0.005
Identities = 38/111 (34%), Positives = 51/111 (45%), Gaps = 17/111 (15%)
Query: 6 RAGRAGRGPWIIRGASRPSGAESYSELLSS--RPASPRGASFSAE--PRPRASLPPPRPA 61
R G +GRG W+ P G E++ +L S R A G S+ + PR R P P
Sbjct: 215 RPGASGRGRWV-SAPLPPKGTETFFCVLPSALRAALSCGPSWGEDSGPRHRELRPDPDSR 273
Query: 62 RPSHLLWPKRLPGRPGRAPGDRRAALPPPGTRSPFARAAAELGPSYQQIAG 112
R S P+ PG P +A PG R AR AA LG +++ +AG
Sbjct: 274 RASAERSPRCPPGSPRKA---------GPGRRD--ARGAA-LGGAFRVLAG 312
>gi|111118972 collagen, type XI, alpha 2 isoform 2 preproprotein
[Homo sapiens]
Length = 1650
Score = 40.0 bits (92), Expect = 8e-04
Identities = 48/155 (30%), Positives = 55/155 (35%), Gaps = 34/155 (21%)
Query: 9 RAGRGPWIIRGASRPSGAESYSELLSSRPASPRGASFSAEPR-PRASLPPPRPARPSHLL 67
R RGP RG P GA S +G S P P P P P+
Sbjct: 751 RGERGPTGPRGQRGPRGATGKS--------GAKGTSGGDGPHGPPGERGLPGPQGPNGFP 802
Query: 68 WPKRLPGRPGR-----APGDR-------RAALP-PPGTRSPFARAAAELGPSYQQIAGLR 114
PK PG PG+ PG R + P PPG P AA E GP G R
Sbjct: 803 GPKGPPGPPGKDGLPGHPGQRGEVGFQGKTGPPGPPGVVGP-QGAAGETGP-----MGER 856
Query: 115 RRPVSHSPAHERPSPASSAAASARTSRGDSGDPGP 149
P P E+ P ++ G GDPGP
Sbjct: 857 GHPGPPGPPGEQGLPGTAG------KEGTKGDPGP 885
Score = 34.7 bits (78), Expect = 0.033
Identities = 37/122 (30%), Positives = 46/122 (37%), Gaps = 30/122 (24%)
Query: 57 PPRPARPSHLLWPKRLPGRPGRA--PGDR----RAALP-------PPGT--RSPF----- 96
PP P P+ L+ P + G PG PG+R RA LP PPGT PF
Sbjct: 314 PPGPEGPAGLIGPPGIQGNPGPVGDPGERGPPGRAGLPGSDGAPGPPGTSLMLPFRFGSG 373
Query: 97 --------ARAAAELGPSYQQIAGLRRRPVSHSPAHERPSPASSAAASARTSRGDSGDPG 148
A A+ QQ R P RP P + +G+SGD G
Sbjct: 374 GGDKGPVVAAQEAQAQAILQQARLALRGPPGPMGYTGRPGPLGQPGSPG--LKGESGDLG 431
Query: 149 PE 150
P+
Sbjct: 432 PQ 433
Score = 29.6 bits (65), Expect = 1.1
Identities = 41/138 (29%), Positives = 47/138 (34%), Gaps = 23/138 (16%)
Query: 13 GPWIIRGASRPSGAESYSELLSSRPASPRGASFSAEPRPRASLPPPRPARPSHLLWPKRL 72
GP + G S P G LL P P G P P P P L P+
Sbjct: 512 GPRGLPGESGPRG------LLG--PKGPPGI-----PGPPGVRGMDGPQGPKGSLGPQGE 558
Query: 73 PGRPGRAPGDRRAALP-PPGTRSPFARAAAELGPSYQQIAGLRRRPVSHSPAHERPSPAS 131
PG PG+ LP P G P E GP Q GL P S P P
Sbjct: 559 PGPPGQQGTPGTQGLPGPQGAIGPH----GEKGP--QGKPGLPGMPGSDGPPGH---PGK 609
Query: 132 SAAASARTSRGDSGDPGP 149
+ ++G SG GP
Sbjct: 610 EGPPGTKGNQGPSGPQGP 627
Database: hs.faa
Posted date: Aug 4, 2009 4:42 PM
Number of letters in database: 18,247,518
Number of sequences in database: 37,866
Lambda K H
0.313 0.131 0.411
Gapped
Lambda K H
0.267 0.0410 0.140
Matrix: BLOSUM62
Gap Penalties: Existence: 11, Extension: 1
Number of Hits to DB: 9,087,610
Number of Sequences: 37866
Number of extensions: 648633
Number of successful extensions: 6968
Number of sequences better than 10.0: 30
Number of HSP's better than 10.0 without gapping: 316
Number of HSP's successfully gapped in prelim test: 1249
Number of HSP's that attempted gapping in prelim test: 4654
Number of HSP's gapped (non-prelim): 3187
length of query: 153
length of database: 18,247,518
effective HSP length: 93
effective length of query: 60
effective length of database: 14,725,980
effective search space: 883558800
effective search space used: 883558800
T: 11
A: 40
X1: 16 ( 7.2 bits)
X2: 38 (14.6 bits)
X3: 64 (24.7 bits)
S1: 42 (21.9 bits)
S2: 57 (26.6 bits)
Search results were obtained with NCBI BLAST and RefSeq entries.
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Guide to the Human Genome
Copyright © 2010 by Stewart Scherer. All rights reserved.