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Search of human proteins with 239753821
BLASTP 2.2.11 [Jun-05-2005]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= gi|239753821 PREDICTED: hypothetical protein [Homo sapiens]
(192 letters)
Database: hs.faa
37,866 sequences; 18,247,518 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
gi|239753821 PREDICTED: hypothetical protein [Homo sapiens] 402 e-113
gi|239748384 PREDICTED: hypothetical protein XP_002346651 [Homo ... 45 3e-05
gi|239742312 PREDICTED: hypothetical protein XP_002342488 [Homo ... 45 3e-05
gi|24431933 reticulon 4 isoform B [Homo sapiens] 41 7e-04
gi|47519490 reticulon 4 isoform D [Homo sapiens] 41 7e-04
gi|24431935 reticulon 4 isoform A [Homo sapiens] 41 7e-04
gi|39930517 sterile alpha motif domain containing 1 [Homo sapiens] 40 0.002
gi|210032509 hypothetical protein LOC100130302 [Homo sapiens] 39 0.002
gi|11034811 catenin (cadherin-associated protein), delta 2 (neur... 38 0.005
gi|239756268 PREDICTED: hypothetical protein XP_002344877 [Homo ... 37 0.008
gi|239755924 PREDICTED: hypothetical protein [Homo sapiens] 37 0.010
gi|239750442 PREDICTED: hypothetical protein XP_002347364 [Homo ... 37 0.010
gi|239744744 PREDICTED: hypothetical protein XP_002343250 [Homo ... 37 0.010
gi|169790903 cyclin-dependent kinase inhibitor 1C isoform b [Hom... 36 0.018
gi|169790899 cyclin-dependent kinase inhibitor 1C isoform b [Hom... 36 0.018
gi|4557441 cyclin-dependent kinase inhibitor 1C isoform a [Homo ... 36 0.018
gi|239752710 PREDICTED: similar to coiled-coil-helix-coiled-coil... 36 0.018
gi|239747238 PREDICTED: similar to coiled-coil-helix-coiled-coil... 36 0.018
gi|239741059 PREDICTED: similar to coiled-coil-helix-coiled-coil... 36 0.018
gi|149408126 nemo like kinase [Homo sapiens] 36 0.018
gi|148727370 immediate early response 5-like [Homo sapiens] 36 0.023
gi|239754211 PREDICTED: hypothetical protein XP_002345911 [Homo ... 35 0.030
gi|239751637 PREDICTED: hypothetical protein FLJ22184 [Homo sapi... 35 0.030
gi|33286436 gametogenetin [Homo sapiens] 35 0.030
gi|13994287 BTE-binding protein 4 [Homo sapiens] 35 0.039
gi|146219843 Snf2-related CBP activator protein [Homo sapiens] 35 0.039
gi|239745177 PREDICTED: hypothetical protein XP_002343381 [Homo ... 35 0.051
gi|19111150 angiomotin isoform 2 [Homo sapiens] 35 0.051
gi|166064029 angiomotin isoform 1 [Homo sapiens] 35 0.051
gi|24586659 scavenger receptor class F, member 2 isoform 1 [Homo... 35 0.051
>gi|239753821 PREDICTED: hypothetical protein [Homo sapiens]
Length = 192
Score = 402 bits (1033), Expect = e-113
Identities = 192/192 (100%), Positives = 192/192 (100%)
Query: 1 MLVCCDACFKWFYFFTLICSVDRTRGESTPRSPVESYSQTNGHLQQWGRGGQQPGNPKHL 60
MLVCCDACFKWFYFFTLICSVDRTRGESTPRSPVESYSQTNGHLQQWGRGGQQPGNPKHL
Sbjct: 1 MLVCCDACFKWFYFFTLICSVDRTRGESTPRSPVESYSQTNGHLQQWGRGGQQPGNPKHL 60
Query: 61 REHSDGGCPGRHAAVLPSQALAELVNSTLGHAQRKELHPPSLHPRAFQPQHITQLRARKA 120
REHSDGGCPGRHAAVLPSQALAELVNSTLGHAQRKELHPPSLHPRAFQPQHITQLRARKA
Sbjct: 61 REHSDGGCPGRHAAVLPSQALAELVNSTLGHAQRKELHPPSLHPRAFQPQHITQLRARKA 120
Query: 121 CTHREPRAPLPPYTSTRRASPAAAAAAILLLPARLPQLRMPRARAPRPAPAGQPPKRERA 180
CTHREPRAPLPPYTSTRRASPAAAAAAILLLPARLPQLRMPRARAPRPAPAGQPPKRERA
Sbjct: 121 CTHREPRAPLPPYTSTRRASPAAAAAAILLLPARLPQLRMPRARAPRPAPAGQPPKRERA 180
Query: 181 AAAPRSAPAAAA 192
AAAPRSAPAAAA
Sbjct: 181 AAAPRSAPAAAA 192
>gi|239748384 PREDICTED: hypothetical protein XP_002346651 [Homo
sapiens]
Length = 246
Score = 45.4 bits (106), Expect = 3e-05
Identities = 37/92 (40%), Positives = 45/92 (48%), Gaps = 12/92 (13%)
Query: 110 QHITQLRARKACTHREPRAPLPPYTSTRRASPAAAAAAILLLP---------ARLPQLRM 160
Q ++ L +C +P P RR +PA A + P +R +
Sbjct: 158 QELSNLSTLPSCGPEKPARIENPERPCRR-TPAPGAPRLQPPPPPSCSCQPGSRSSECLE 216
Query: 161 PRARAPRPAPAGQPPKRERAAAAPRSAPAAAA 192
P RAP P PA P KRERAAAAPRSAPAAAA
Sbjct: 217 PERRAP-PRPAN-PAKRERAAAAPRSAPAAAA 246
>gi|239742312 PREDICTED: hypothetical protein XP_002342488 [Homo
sapiens]
Length = 246
Score = 45.4 bits (106), Expect = 3e-05
Identities = 37/92 (40%), Positives = 45/92 (48%), Gaps = 12/92 (13%)
Query: 110 QHITQLRARKACTHREPRAPLPPYTSTRRASPAAAAAAILLLP---------ARLPQLRM 160
Q ++ L +C +P P RR +PA A + P +R +
Sbjct: 158 QELSNLSTLPSCGPEKPARIENPERPCRR-TPAPGAPRLQPPPPPSCSCQPGSRSSECLE 216
Query: 161 PRARAPRPAPAGQPPKRERAAAAPRSAPAAAA 192
P RAP P PA P KRERAAAAPRSAPAAAA
Sbjct: 217 PERRAP-PRPAN-PAKRERAAAAPRSAPAAAA 246
>gi|24431933 reticulon 4 isoform B [Homo sapiens]
Length = 373
Score = 40.8 bits (94), Expect = 7e-04
Identities = 26/67 (38%), Positives = 34/67 (50%), Gaps = 2/67 (2%)
Query: 124 REPRAPLPPYTSTRRASPAAAAAAILLLPARLPQLRMPRARAPRPAPAGQPPKRERAAAA 183
R+P P +ST A +AAA+ P++LP+ P AR P P PA P+ E
Sbjct: 104 RQPSWDPSPVSSTVPAPSPLSAAAVS--PSKLPEDDEPPARPPPPPPASVSPQAEPVWTP 161
Query: 184 PRSAPAA 190
P APAA
Sbjct: 162 PAPAPAA 168
>gi|47519490 reticulon 4 isoform D [Homo sapiens]
Length = 392
Score = 40.8 bits (94), Expect = 7e-04
Identities = 26/67 (38%), Positives = 34/67 (50%), Gaps = 2/67 (2%)
Query: 124 REPRAPLPPYTSTRRASPAAAAAAILLLPARLPQLRMPRARAPRPAPAGQPPKRERAAAA 183
R+P P +ST A +AAA+ P++LP+ P AR P P PA P+ E
Sbjct: 104 RQPSWDPSPVSSTVPAPSPLSAAAVS--PSKLPEDDEPPARPPPPPPASVSPQAEPVWTP 161
Query: 184 PRSAPAA 190
P APAA
Sbjct: 162 PAPAPAA 168
>gi|24431935 reticulon 4 isoform A [Homo sapiens]
Length = 1192
Score = 40.8 bits (94), Expect = 7e-04
Identities = 26/67 (38%), Positives = 34/67 (50%), Gaps = 2/67 (2%)
Query: 124 REPRAPLPPYTSTRRASPAAAAAAILLLPARLPQLRMPRARAPRPAPAGQPPKRERAAAA 183
R+P P +ST A +AAA+ P++LP+ P AR P P PA P+ E
Sbjct: 104 RQPSWDPSPVSSTVPAPSPLSAAAVS--PSKLPEDDEPPARPPPPPPASVSPQAEPVWTP 161
Query: 184 PRSAPAA 190
P APAA
Sbjct: 162 PAPAPAA 168
>gi|39930517 sterile alpha motif domain containing 1 [Homo sapiens]
Length = 538
Score = 39.7 bits (91), Expect = 0.002
Identities = 30/66 (45%), Positives = 33/66 (50%), Gaps = 6/66 (9%)
Query: 128 APLPPYTSTRRASPAAAAAAILLLPARLPQLRMPRARAP-RPAPAGQPPKRERAA--AAP 184
A PP T PA AAA PAR P+ A AP P PA P+ +RAA AAP
Sbjct: 124 AAAPPPTPAPPPPPAPVAAAA---PARAPRAAAAAATAPPSPGPAQPGPRAQRAAPLAAP 180
Query: 185 RSAPAA 190
APAA
Sbjct: 181 PPAPAA 186
Score = 39.3 bits (90), Expect = 0.002
Identities = 31/77 (40%), Positives = 33/77 (42%), Gaps = 19/77 (24%)
Query: 118 RKACTHREPRAPLPPYTSTR--RASPAAAAAAILLLPARLPQLRMPRARAPRPAPAGQPP 175
R A + PR P R R +PAAAAAA AP P PA PP
Sbjct: 94 RNAARVQPPRRGATPPAPPRAPRGAPAAAAAA-----------------APPPTPAPPPP 136
Query: 176 KRERAAAAPRSAPAAAA 192
AAAAP AP AAA
Sbjct: 137 PAPVAAAAPARAPRAAA 153
Score = 37.0 bits (84), Expect = 0.010
Identities = 33/98 (33%), Positives = 38/98 (38%), Gaps = 8/98 (8%)
Query: 100 PSLHPRAFQPQHITQLRARKACTHREPRAPLPPYTSTRRASPAAAAAAILLLPARLPQLR 159
P PRA + A T P P P + +P AAAAA P+ P
Sbjct: 108 PPAPPRAPRGAPAAAAAAAPPPTPAPPPPPAPVAAAAPARAPRAAAAAATAPPSPGPAQP 167
Query: 160 MPRAR------APRPAPAGQPPKRERAAAAPRSAPAAA 191
PRA+ AP PAPA P A PR AP A
Sbjct: 168 GPRAQRAAPLAAPPPAPAA--PPAVAPPAGPRRAPPPA 203
Score = 33.5 bits (75), Expect = 0.11
Identities = 33/91 (36%), Positives = 36/91 (39%), Gaps = 5/91 (5%)
Query: 99 PPSLHPRAFQPQHITQLRARKACTHREPRAP--LPPYTSTRRASPAAAAAAILLLPARLP 156
PPS P QP Q A A P AP + P RRA P A AA LP P
Sbjct: 159 PPS--PGPAQPGPRAQRAAPLAAPPPAPAAPPAVAPPAGPRRAPPPAVAAREPPLPPP-P 215
Query: 157 QLRMPRARAPRPAPAGQPPKRERAAAAPRSA 187
Q P + P P QPP A A +A
Sbjct: 216 QPPAPPQQQQPPPPQPQPPPEGGAVRAGGAA 246
Score = 28.9 bits (63), Expect = 2.8
Identities = 35/127 (27%), Positives = 41/127 (32%), Gaps = 21/127 (16%)
Query: 49 RGGQQPGNPKHLREHSDGGCPGRHAAVLPSQALAELVNSTLGHAQRKELHPPSLHPRAFQ 108
RG P P+ R G P AA P A PP A
Sbjct: 104 RGATPPAPPRAPR-----GAPAAAAAAAPPPTPAP--------------PPPPAPVAAAA 144
Query: 109 PQHITQLRARKACTHREPRAPLPPYTSTRRASPAAAAAAILLLPARLPQLRMPRARAPRP 168
P + A A P P P +RA+P AA P + PR RAP P
Sbjct: 145 PARAPRAAAAAATAPPSP-GPAQPGPRAQRAAPLAAPPPAPAAPPAVAPPAGPR-RAPPP 202
Query: 169 APAGQPP 175
A A + P
Sbjct: 203 AVAAREP 209
Score = 27.3 bits (59), Expect = 8.2
Identities = 24/74 (32%), Positives = 25/74 (33%), Gaps = 7/74 (9%)
Query: 120 ACTHREPRAPL-----PPYTSTRRASPAAAAAAILLLPARLPQLRMPRARAPRPAPAGQP 174
A R PRA PP + P A AA L P P P A AP P P
Sbjct: 143 AAPARAPRAAAAAATAPPSPGPAQPGPRAQRAAPLAAPPPAPAA--PPAVAPPAGPRRAP 200
Query: 175 PKRERAAAAPRSAP 188
P A P P
Sbjct: 201 PPAVAAREPPLPPP 214
>gi|210032509 hypothetical protein LOC100130302 [Homo sapiens]
Length = 887
Score = 39.3 bits (90), Expect = 0.002
Identities = 35/99 (35%), Positives = 47/99 (47%), Gaps = 8/99 (8%)
Query: 96 ELHPPSLHPRAFQPQHITQLRARKACTHREPRAPLP-PYTSTRR--ASPAAAAAAILLLP 152
E HPP PR P ++ + + ++ +PL P+++ A+ AAAAAA
Sbjct: 458 EKHPP---PRTQLPSSSGKISSGNSFPPQQAGSPLKRPFSAAAAIAAAAAAAAAAAAAAA 514
Query: 153 ARLPQLRMPRARAPRPAPAGQPPKRERAAAAPRSAPAAA 191
A P + A AP A A P AAAAP APAAA
Sbjct: 515 AAAPAPALAAAAAPALAAAAAPAL--AAAAAPAPAPAAA 551
Score = 35.8 bits (81), Expect = 0.023
Identities = 20/50 (40%), Positives = 27/50 (54%), Gaps = 3/50 (6%)
Query: 128 APLPPYTSTRRASPAAAAAAILLLPARLPQLRMPRARAPRPAPAGQPPKR 177
AP P A+PAAAA+A P+ + +P +A RP PA QPP +
Sbjct: 545 APAPAAAPAVAAAPAAAASAA---PSHSQKPSVPLIQASRPCPAAQPPTK 591
>gi|11034811 catenin (cadherin-associated protein), delta 2 (neural
plakophilin-related arm-repeat protein) [Homo sapiens]
Length = 1225
Score = 38.1 bits (87), Expect = 0.005
Identities = 28/71 (39%), Positives = 34/71 (47%), Gaps = 7/71 (9%)
Query: 126 PRAPLPPYTSTR----RASPAAAAAAILLLPARLPQLRMPRARAPRPAP-AGQPPKRERA 180
PR P P + A PAAAAAA+ + LP PR +P AP G P K +R
Sbjct: 226 PREPFAPSLGSAFHLPDAPPAAAAAALYYSSSTLPA--PPRGGSPLAAPQGGSPTKLQRG 283
Query: 181 AAAPRSAPAAA 191
+AP A AA
Sbjct: 284 GSAPEGATYAA 294
>gi|239756268 PREDICTED: hypothetical protein XP_002344877 [Homo
sapiens]
Length = 252
Score = 37.4 bits (85), Expect = 0.008
Identities = 34/95 (35%), Positives = 44/95 (46%), Gaps = 16/95 (16%)
Query: 108 QPQHITQLRARKACTHREPRAPLPPYTSTRRASPAAAAAAILLLPARLPQLRMPRARAPR 167
Q + ++R R+A R RAP PP + +A PA LL A L R RAP
Sbjct: 119 QVAEVWRIRQREAGAARAARAPKPPAPGSGQALPADP-----LLQAAASTL-AGRPRAPP 172
Query: 168 PAP-AGQP---------PKRERAAAAPRSAPAAAA 192
PAP AGQ +RE+ AA P + P A+
Sbjct: 173 PAPAAGQRGLGSGALGLGRREKLAARPAATPRRAS 207
>gi|239755924 PREDICTED: hypothetical protein [Homo sapiens]
Length = 102
Score = 37.0 bits (84), Expect = 0.010
Identities = 27/73 (36%), Positives = 34/73 (46%), Gaps = 7/73 (9%)
Query: 124 REPRAPLPPYTSTRRASPAAAAAAILLLPARLPQLRMPR-ARAPRPAPA----GQPPKRE 178
R PR P PP TRR + + L R P+ +PR RAP PAPA G P+
Sbjct: 9 RGPRTPRPPALGTRRLPSSVRGSP--QLEDRQPRRPLPRLRRAPPPAPALGNGGLAPRAT 66
Query: 179 RAAAAPRSAPAAA 191
+ A R P +A
Sbjct: 67 SGSRAARQRPDSA 79
>gi|239750442 PREDICTED: hypothetical protein XP_002347364 [Homo
sapiens]
Length = 102
Score = 37.0 bits (84), Expect = 0.010
Identities = 27/73 (36%), Positives = 34/73 (46%), Gaps = 7/73 (9%)
Query: 124 REPRAPLPPYTSTRRASPAAAAAAILLLPARLPQLRMPR-ARAPRPAPA----GQPPKRE 178
R PR P PP TRR + + L R P+ +PR RAP PAPA G P+
Sbjct: 9 RGPRTPRPPALGTRRLPSSVRGSP--QLEDRQPRRPLPRLRRAPPPAPALGNGGLAPRAT 66
Query: 179 RAAAAPRSAPAAA 191
+ A R P +A
Sbjct: 67 SGSRAARQRPDSA 79
>gi|239744744 PREDICTED: hypothetical protein XP_002343250 [Homo
sapiens]
Length = 102
Score = 37.0 bits (84), Expect = 0.010
Identities = 27/73 (36%), Positives = 34/73 (46%), Gaps = 7/73 (9%)
Query: 124 REPRAPLPPYTSTRRASPAAAAAAILLLPARLPQLRMPR-ARAPRPAPA----GQPPKRE 178
R PR P PP TRR + + L R P+ +PR RAP PAPA G P+
Sbjct: 9 RGPRTPRPPALGTRRLPSSVRGSP--QLEDRQPRRPLPRLRRAPPPAPALGNGGLAPRAT 66
Query: 179 RAAAAPRSAPAAA 191
+ A R P +A
Sbjct: 67 SGSRAARQRPDSA 79
>gi|169790903 cyclin-dependent kinase inhibitor 1C isoform b [Homo
sapiens]
Length = 305
Score = 36.2 bits (82), Expect = 0.018
Identities = 25/70 (35%), Positives = 30/70 (42%), Gaps = 5/70 (7%)
Query: 128 APLPPYTSTRRASPAAAAAAILLL-----PARLPQLRMPRARAPRPAPAGQPPKRERAAA 182
AP P A+P AA A+ +L PA P AP PAPA P A
Sbjct: 144 APAPAPAPAPVAAPVAAPVAVAVLAPAPAPAPAPAPAPAPVAAPAPAPAPAPAPAPAPAP 203
Query: 183 APRSAPAAAA 192
AP +AP +A
Sbjct: 204 APDAAPQESA 213
Score = 29.3 bits (64), Expect = 2.2
Identities = 24/69 (34%), Positives = 28/69 (40%), Gaps = 11/69 (15%)
Query: 128 APLPPYTSTRRASPAAAAAAIL----LLPARLPQLRMPRARAPRPAPAGQPPKRERAAAA 183
AP P + + P AA L P +LP + P PAPA PP A A
Sbjct: 94 APRPVAVAVAVSPPLEPAAESLDGLEEAPEQLPSV-------PVPAPASTPPPVPVLAPA 146
Query: 184 PRSAPAAAA 192
P APA A
Sbjct: 147 PAPAPAPVA 155
>gi|169790899 cyclin-dependent kinase inhibitor 1C isoform b [Homo
sapiens]
Length = 305
Score = 36.2 bits (82), Expect = 0.018
Identities = 25/70 (35%), Positives = 30/70 (42%), Gaps = 5/70 (7%)
Query: 128 APLPPYTSTRRASPAAAAAAILLL-----PARLPQLRMPRARAPRPAPAGQPPKRERAAA 182
AP P A+P AA A+ +L PA P AP PAPA P A
Sbjct: 144 APAPAPAPAPVAAPVAAPVAVAVLAPAPAPAPAPAPAPAPVAAPAPAPAPAPAPAPAPAP 203
Query: 183 APRSAPAAAA 192
AP +AP +A
Sbjct: 204 APDAAPQESA 213
Score = 29.3 bits (64), Expect = 2.2
Identities = 24/69 (34%), Positives = 28/69 (40%), Gaps = 11/69 (15%)
Query: 128 APLPPYTSTRRASPAAAAAAIL----LLPARLPQLRMPRARAPRPAPAGQPPKRERAAAA 183
AP P + + P AA L P +LP + P PAPA PP A A
Sbjct: 94 APRPVAVAVAVSPPLEPAAESLDGLEEAPEQLPSV-------PVPAPASTPPPVPVLAPA 146
Query: 184 PRSAPAAAA 192
P APA A
Sbjct: 147 PAPAPAPVA 155
>gi|4557441 cyclin-dependent kinase inhibitor 1C isoform a [Homo
sapiens]
Length = 316
Score = 36.2 bits (82), Expect = 0.018
Identities = 25/70 (35%), Positives = 30/70 (42%), Gaps = 5/70 (7%)
Query: 128 APLPPYTSTRRASPAAAAAAILLL-----PARLPQLRMPRARAPRPAPAGQPPKRERAAA 182
AP P A+P AA A+ +L PA P AP PAPA P A
Sbjct: 155 APAPAPAPAPVAAPVAAPVAVAVLAPAPAPAPAPAPAPAPVAAPAPAPAPAPAPAPAPAP 214
Query: 183 APRSAPAAAA 192
AP +AP +A
Sbjct: 215 APDAAPQESA 224
Score = 29.3 bits (64), Expect = 2.2
Identities = 24/69 (34%), Positives = 28/69 (40%), Gaps = 11/69 (15%)
Query: 128 APLPPYTSTRRASPAAAAAAIL----LLPARLPQLRMPRARAPRPAPAGQPPKRERAAAA 183
AP P + + P AA L P +LP + P PAPA PP A A
Sbjct: 105 APRPVAVAVAVSPPLEPAAESLDGLEEAPEQLPSV-------PVPAPASTPPPVPVLAPA 157
Query: 184 PRSAPAAAA 192
P APA A
Sbjct: 158 PAPAPAPVA 166
>gi|239752710 PREDICTED: similar to
coiled-coil-helix-coiled-coil-helix domain containing 2
[Homo sapiens]
Length = 184
Score = 36.2 bits (82), Expect = 0.018
Identities = 27/71 (38%), Positives = 35/71 (49%), Gaps = 18/71 (25%)
Query: 122 THREPRAPLPPYTSTRRASPAAAAAAILLLPARLPQLRMPRARAPRPAPAGQPPKRERAA 181
+ R PR P ++R A PA+ R PQ+R APRPAP QPP AA
Sbjct: 29 SRRVPRIPGSRSHTSRMAPPAS----------RAPQMRA----APRPAPVAQPP----AA 70
Query: 182 AAPRSAPAAAA 192
A P + ++AA
Sbjct: 71 APPSTVGSSAA 81
>gi|239747238 PREDICTED: similar to
coiled-coil-helix-coiled-coil-helix domain containing 2
isoform 3 [Homo sapiens]
Length = 184
Score = 36.2 bits (82), Expect = 0.018
Identities = 27/71 (38%), Positives = 35/71 (49%), Gaps = 18/71 (25%)
Query: 122 THREPRAPLPPYTSTRRASPAAAAAAILLLPARLPQLRMPRARAPRPAPAGQPPKRERAA 181
+ R PR P ++R A PA+ R PQ+R APRPAP QPP AA
Sbjct: 29 SRRVPRIPGSRSHTSRMAPPAS----------RAPQMRA----APRPAPVAQPP----AA 70
Query: 182 AAPRSAPAAAA 192
A P + ++AA
Sbjct: 71 APPSTVGSSAA 81
>gi|239741059 PREDICTED: similar to
coiled-coil-helix-coiled-coil-helix domain containing 2
isoform 3 [Homo sapiens]
Length = 184
Score = 36.2 bits (82), Expect = 0.018
Identities = 27/71 (38%), Positives = 35/71 (49%), Gaps = 18/71 (25%)
Query: 122 THREPRAPLPPYTSTRRASPAAAAAAILLLPARLPQLRMPRARAPRPAPAGQPPKRERAA 181
+ R PR P ++R A PA+ R PQ+R APRPAP QPP AA
Sbjct: 29 SRRVPRIPGSRSHTSRMAPPAS----------RAPQMRA----APRPAPVAQPP----AA 70
Query: 182 AAPRSAPAAAA 192
A P + ++AA
Sbjct: 71 APPSTVGSSAA 81
>gi|149408126 nemo like kinase [Homo sapiens]
Length = 527
Score = 36.2 bits (82), Expect = 0.018
Identities = 36/103 (34%), Positives = 45/103 (43%), Gaps = 17/103 (16%)
Query: 91 HAQRKELHPPSLHPRAFQPQHITQLRARKACTHREPRAPLPPYTSTRRASPAAAAAA-IL 149
H L PP LH H+ A A H P+ +TS+ A+ AAAAAA +
Sbjct: 32 HHHLPHLPPPHLHHHHHPQHHLHPGSA--AAVH-----PVQQHTSSAAAAAAAAAAAAAM 84
Query: 150 LLPARLPQLRMPRARAPRPAPAGQPPKRERAAAAPRSAPAAAA 192
L P + + P +P P A P AAAAP AAAA
Sbjct: 85 LNPGQ----QQPYFPSPAPGQAPGP-----AAAAPAQVQAAAA 118
>gi|148727370 immediate early response 5-like [Homo sapiens]
Length = 404
Score = 35.8 bits (81), Expect = 0.023
Identities = 43/165 (26%), Positives = 59/165 (35%), Gaps = 31/165 (18%)
Query: 52 QQPGNPKHLREHSDGGCPGRHAAVLPSQALAELVNSTLGHAQRKELHPPSLHPRAFQPQH 111
QQ P H +H PG +P+ A A+ LG E P+ + Q
Sbjct: 63 QQQQPPHHQHQHLAYAAPG-----MPASA-ADFGPLQLGGGGDAEAREPAARHQLHQLHQ 116
Query: 112 ITQLRARKACTHREPRAPLPPYTSTRRASPAAAAAAILLLPARLPQLRMPRARA------ 165
+ QL ++ + AP + +PA A A+ LP L+ P
Sbjct: 117 LHQLHLQQQLHQHQHPAPRGCAAAAAAGAPAGGAGALSELPG-CAALQPPHGAPHRGQPL 175
Query: 166 --------------PRPAPAGQPPKRERAAAA----PRSAPAAAA 192
P PAPA P+ RA AA P +AP AAA
Sbjct: 176 EPLQPGPAPLPLPLPPPAPAALCPRDPRAPAACSAPPGAAPPAAA 220
>gi|239754211 PREDICTED: hypothetical protein XP_002345911 [Homo
sapiens]
Length = 131
Score = 35.4 bits (80), Expect = 0.030
Identities = 30/105 (28%), Positives = 41/105 (39%), Gaps = 4/105 (3%)
Query: 85 VNSTLGHAQRKELHPPSLHPRAFQPQHITQLRARKACTHREPRAPLPPYTSTRRASPAAA 144
++S G R H P+ + I A ++ R P PP T+T AA
Sbjct: 6 IHSHFGRGYRGGRHYPNAAAGPARGTWIPGFSAERSSRRRN--TPRPPSTATMVTGRVAA 63
Query: 145 AAAILLLPARLPQLRMPRA--RAPRPAPAGQPPKRERAAAAPRSA 187
+A L P+ +P P A AP +P P R A PR A
Sbjct: 64 GSAHALRPSAVPGPLCPEATPSAPPTSPLHPAPPSARPAPKPRPA 108
>gi|239751637 PREDICTED: hypothetical protein FLJ22184 [Homo
sapiens]
Length = 1124
Score = 35.4 bits (80), Expect = 0.030
Identities = 40/171 (23%), Positives = 64/171 (37%), Gaps = 12/171 (7%)
Query: 23 RTRGESTPRSPVESYSQTNGHLQQWGRGGQQPGNPKHLREHSDGGCPGRHAAVLPSQALA 82
R + PR P E ++ + +P R + GG + L S A
Sbjct: 191 RPAPSARPRPPTEGPRKSVSSASE--HSTTEPSPAARRRPSAGGGLQRPASRSLSSSATP 248
Query: 83 ELVNSTLGHAQRKELHPPSLHPRAFQPQHITQLRARKACTHREPRAP-LPPYTSTRRASP 141
+ G + R P+ HP +P+ + LR + R+ AP L P +S+ A+P
Sbjct: 249 LSSPARSGPSARGTPRAPA-HPSQPKPKGLQALRPPQVTPPRKDAAPALGPLSSSPLATP 307
Query: 142 AAAAAAILLLPARLPQLRMPRARAPRPAPAGQPPKRERAAAAPRSAPAAAA 192
+ + +P P A P PA PP A P + P+ +A
Sbjct: 308 SPSGTKARPVP--------PPDNAATPLPATLPPSPPLATPLPLAPPSPSA 350
Score = 27.7 bits (60), Expect = 6.3
Identities = 31/120 (25%), Positives = 42/120 (35%), Gaps = 29/120 (24%)
Query: 100 PSLHPRAFQPQ-------HITQLRARKACTHREPRAPL---PPYTSTRRASPAAAAAAIL 149
PSL P Q H+ C + P +PL PP T + A+P A L
Sbjct: 539 PSLAPPPLQTASAPLTTPHLETPPCPAPCPLQAPPSPLTTPPPETPSSIATPPPQAPPAL 598
Query: 150 LL------------------PARLPQLRMPRARAPRPAPAGQPPKRERAAAAPRSAPAAA 191
P P L +P +AP P+P PP A +P++ A A
Sbjct: 599 ASPPLQGLPSPPLSPLATPPPQAPPXLALPPLQAP-PSPPASPPLSPLATPSPQAPNALA 657
Score = 27.7 bits (60), Expect = 6.3
Identities = 20/64 (31%), Positives = 26/64 (40%), Gaps = 8/64 (12%)
Query: 129 PLPPYTSTRRASPAAAAAAILLLPARLPQLRMPRARAPRPAPAGQPPKRERAAAAPRSAP 188
P PP ++ SP+A P P L++P P+P PP A PR P
Sbjct: 708 PSPP--ASPPMSPSATPPPQAPPPLAAPPLQVP------PSPPASPPMSPSATPPPRVPP 759
Query: 189 AAAA 192
AA
Sbjct: 760 LLAA 763
>gi|33286436 gametogenetin [Homo sapiens]
Length = 652
Score = 35.4 bits (80), Expect = 0.030
Identities = 32/93 (34%), Positives = 38/93 (40%), Gaps = 19/93 (20%)
Query: 99 PPSLHPRAFQPQHITQLRARKACTHREPRAPLPPYTSTRRASPAAAAAAILLLPARLPQL 158
PP+L P A QP T PL P + ++ A AA PA P L
Sbjct: 446 PPTLQPPALQP------------TPLPVAPPLTPGLGHKESALAPTAA-----PALPPAL 488
Query: 159 RMPRARAPRPAPAGQPPKRERAAAAPRSAPAAA 191
+A AP PAPA P E + APAAA
Sbjct: 489 AADQAPAPSPAPA--PTVAEPSPPVSAPAPAAA 519
>gi|13994287 BTE-binding protein 4 [Homo sapiens]
Length = 252
Score = 35.0 bits (79), Expect = 0.039
Identities = 29/83 (34%), Positives = 35/83 (42%), Gaps = 11/83 (13%)
Query: 117 ARKACTHREPRAPLPPYTSTRRASPAAAAAAILLLPARLPQLRMPRARAPRPAPAGQPPK 176
AR+ P PP + P AAAA LL + L LR P AP G P
Sbjct: 46 ARREAASPGTPGPPPPPPAASGPGPGAAAAPHLLAASILADLR----GGPGAAPGGASPA 101
Query: 177 RERAAA-------APRSAPAAAA 192
+AA AP +AP+AAA
Sbjct: 102 SSSSAASSPSSGRAPGAAPSAAA 124
>gi|146219843 Snf2-related CBP activator protein [Homo sapiens]
Length = 3230
Score = 35.0 bits (79), Expect = 0.039
Identities = 26/78 (33%), Positives = 35/78 (44%), Gaps = 14/78 (17%)
Query: 124 REPRAPLPPYTSTRRASPAAAAAAIL-----LLPARLPQLRMPRARAPRPAPA------- 171
R+ P+PP R P++ A+L L P RLP + ARAP P P
Sbjct: 1318 RDGLTPVPPLAPAPRP-PSSGLPAVLNPRPTLTPGRLPTPTLGTARAPMPTPTLVRPLLK 1376
Query: 172 -GQPPKRERAAAAPRSAP 188
P E +A+AP +AP
Sbjct: 1377 LVHSPSPEVSASAPGAAP 1394
Score = 29.6 bits (65), Expect = 1.6
Identities = 30/111 (27%), Positives = 40/111 (36%), Gaps = 1/111 (0%)
Query: 78 SQALAELVNSTLGHAQRKELHPPSLHPRAFQPQHITQLRARKACTHREPRAPLPPYTSTR 137
SQALA + + + Q L P P A P A + P+ +ST
Sbjct: 1580 SQALATPL-APMAAPQTAILAPSPAPPLAPLPVLAPSPGAAPVLASSQTPVPVMAPSSTP 1638
Query: 138 RASPAAAAAAILLLPARLPQLRMPRARAPRPAPAGQPPKRERAAAAPRSAP 188
S A+A+ P P AP P+P P + A AP AP
Sbjct: 1639 GTSLASASPVPAPTPVLAPSSTQTMLPAPVPSPLPSPASTQTLALAPALAP 1689
Score = 28.9 bits (63), Expect = 2.8
Identities = 31/129 (24%), Positives = 46/129 (35%), Gaps = 20/129 (15%)
Query: 64 SDGGCPGRHAAVLPSQALAELVNSTLGHAQRKELHPPSLHPRAFQPQHITQLRARKACTH 123
S PG + P+ + +NST+ A L P S F
Sbjct: 1516 SSSQTPGHPLLLAPTSSHVPGLNSTVAPACSPVLVPASALASPF---------------- 1559
Query: 124 REPRAPLPPYTSTRRASPAAAAAAILLLPARLPQLRMPRARAPRPAPAGQPPKRERAAAA 183
P AP P +PA++A+ L P L + P+ P+PA A +
Sbjct: 1560 --PSAPNPAPAQASLLAPASSASQALATP--LAPMAAPQTAILAPSPAPPLAPLPVLAPS 1615
Query: 184 PRSAPAAAA 192
P +AP A+
Sbjct: 1616 PGAAPVLAS 1624
Score = 27.7 bits (60), Expect = 6.3
Identities = 13/33 (39%), Positives = 15/33 (45%)
Query: 156 PQLRMPRARAPRPAPAGQPPKRERAAAAPRSAP 188
P+ R R PRPAP +P AA P P
Sbjct: 2427 PRCSPARERVPRPAPRPRPTPASAPAAIPALVP 2459
>gi|239745177 PREDICTED: hypothetical protein XP_002343381 [Homo
sapiens]
Length = 252
Score = 34.7 bits (78), Expect = 0.051
Identities = 33/95 (34%), Positives = 43/95 (45%), Gaps = 16/95 (16%)
Query: 108 QPQHITQLRARKACTHREPRAPLPPYTSTRRASPAAAAAAILLLPARLPQLRMPRARAPR 167
Q + ++R R+A RAP PP + +A PA LL A L R RAP
Sbjct: 119 QVAEVWRIRQREAGAAGAARAPKPPAPGSGQALPADP-----LLQAAASTL-AGRPRAPP 172
Query: 168 PAP-AGQP---------PKRERAAAAPRSAPAAAA 192
PAP AGQ +RE+ AA P + P A+
Sbjct: 173 PAPAAGQRGLGSGALGLGRREKLAARPAATPRRAS 207
>gi|19111150 angiomotin isoform 2 [Homo sapiens]
Length = 675
Score = 34.7 bits (78), Expect = 0.051
Identities = 23/53 (43%), Positives = 26/53 (49%), Gaps = 1/53 (1%)
Query: 139 ASPAAAAAAILLLPARLPQLRMPRARAPRPAPAGQPPKRERAAAAPRSAPAAA 191
A AAAAAA+ + PA + P A P PAPA AP SAPA A
Sbjct: 551 APSAAAAAAVQVAPAAPAPVPAP-ALVPVPAPAAAQASAPAQTQAPTSAPAVA 602
Score = 32.3 bits (72), Expect = 0.25
Identities = 25/61 (40%), Positives = 29/61 (47%), Gaps = 2/61 (3%)
Query: 134 TSTRRASPAA--AAAAILLLPARLPQLRMPRARAPRPAPAGQPPKRERAAAAPRSAPAAA 191
T+ A+P A AAAA A P A A PA AGQ P A+A AP+AA
Sbjct: 496 TTMVAAAPVAVAAAAAPAAAAAPSPATAAATAAAVSPAAAGQIPAAASVASAAAVAPSAA 555
Query: 192 A 192
A
Sbjct: 556 A 556
Score = 30.4 bits (67), Expect = 0.97
Identities = 20/61 (32%), Positives = 29/61 (47%), Gaps = 4/61 (6%)
Query: 135 STRRASPAAAAAAILLL----PARLPQLRMPRARAPRPAPAGQPPKRERAAAAPRSAPAA 190
S +P+AAAAA + + PA +P + AP A A P + + +AP AP
Sbjct: 546 SAAAVAPSAAAAAAVQVAPAAPAPVPAPALVPVPAPAAAQASAPAQTQAPTSAPAVAPTP 605
Query: 191 A 191
A
Sbjct: 606 A 606
>gi|166064029 angiomotin isoform 1 [Homo sapiens]
Length = 1084
Score = 34.7 bits (78), Expect = 0.051
Identities = 23/53 (43%), Positives = 26/53 (49%), Gaps = 1/53 (1%)
Query: 139 ASPAAAAAAILLLPARLPQLRMPRARAPRPAPAGQPPKRERAAAAPRSAPAAA 191
A AAAAAA+ + PA + P A P PAPA AP SAPA A
Sbjct: 960 APSAAAAAAVQVAPAAPAPVPAP-ALVPVPAPAAAQASAPAQTQAPTSAPAVA 1011
Score = 32.3 bits (72), Expect = 0.25
Identities = 25/61 (40%), Positives = 29/61 (47%), Gaps = 2/61 (3%)
Query: 134 TSTRRASPAA--AAAAILLLPARLPQLRMPRARAPRPAPAGQPPKRERAAAAPRSAPAAA 191
T+ A+P A AAAA A P A A PA AGQ P A+A AP+AA
Sbjct: 905 TTMVAAAPVAVAAAAAPAAAAAPSPATAAATAAAVSPAAAGQIPAAASVASAAAVAPSAA 964
Query: 192 A 192
A
Sbjct: 965 A 965
Score = 30.4 bits (67), Expect = 0.97
Identities = 20/61 (32%), Positives = 29/61 (47%), Gaps = 4/61 (6%)
Query: 135 STRRASPAAAAAAILLL----PARLPQLRMPRARAPRPAPAGQPPKRERAAAAPRSAPAA 190
S +P+AAAAA + + PA +P + AP A A P + + +AP AP
Sbjct: 955 SAAAVAPSAAAAAAVQVAPAAPAPVPAPALVPVPAPAAAQASAPAQTQAPTSAPAVAPTP 1014
Query: 191 A 191
A
Sbjct: 1015 A 1015
>gi|24586659 scavenger receptor class F, member 2 isoform 1 [Homo
sapiens]
Length = 870
Score = 34.7 bits (78), Expect = 0.051
Identities = 42/134 (31%), Positives = 53/134 (39%), Gaps = 14/134 (10%)
Query: 69 PGRHAAVLPSQAL---AELVNSTLGHAQRKELHPPSLHPRAFQPQHITQLRARKACTHRE 125
PG AA PS+ ++ T+ H + P P P+ T L A R
Sbjct: 691 PGSEAAPSPSKRKRTPSDKSAHTVEHGSPRTRDPTPRPPGL--PEEATALAAPSPPRARA 748
Query: 126 PRAPLPPYTSTRRASPA--AAAAAILLLPARLPQLRMPR------ARAPRPAPA-GQPPK 176
AP P RR SPA A AA++L R + R A+ PR PA Q K
Sbjct: 749 RAAPRPLGAHGRRRSPAKRAEAASMLAADVRGKTRSLGRAEVALGAQGPREKPAPPQKAK 808
Query: 177 RERAAAAPRSAPAA 190
R A+P AP A
Sbjct: 809 RSVPPASPARAPPA 822
Database: hs.faa
Posted date: Aug 4, 2009 4:42 PM
Number of letters in database: 18,247,518
Number of sequences in database: 37,866
Lambda K H
0.320 0.132 0.423
Gapped
Lambda K H
0.267 0.0410 0.140
Matrix: BLOSUM62
Gap Penalties: Existence: 11, Extension: 1
Number of Hits to DB: 10,116,008
Number of Sequences: 37866
Number of extensions: 594931
Number of successful extensions: 5715
Number of sequences better than 10.0: 30
Number of HSP's better than 10.0 without gapping: 132
Number of HSP's successfully gapped in prelim test: 418
Number of HSP's that attempted gapping in prelim test: 4663
Number of HSP's gapped (non-prelim): 1327
length of query: 192
length of database: 18,247,518
effective HSP length: 97
effective length of query: 95
effective length of database: 14,574,516
effective search space: 1384579020
effective search space used: 1384579020
T: 11
A: 40
X1: 16 ( 7.4 bits)
X2: 38 (14.6 bits)
X3: 64 (24.7 bits)
S1: 41 (21.8 bits)
S2: 59 (27.3 bits)
Search results were obtained with NCBI BLAST and RefSeq entries.
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Guide to the Human Genome
Copyright © 2010 by Stewart Scherer. All rights reserved.