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Search of human proteins with 239753433
BLASTP 2.2.11 [Jun-05-2005]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= gi|239753433 PREDICTED: hypothetical protein XP_002345652 [Homo
sapiens]
(302 letters)
Database: hs.faa
37,866 sequences; 18,247,518 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
gi|239753433 PREDICTED: hypothetical protein XP_002345652 [Homo ... 608 e-174
gi|239743293 PREDICTED: mucin 12 [Homo sapiens] 40 0.002
gi|239508976 PREDICTED: mucin 12, cell surface associated [Homo ... 40 0.002
gi|132626688 mediator of DNA-damage checkpoint 1 [Homo sapiens] 40 0.003
gi|21040326 SON DNA-binding protein isoform F [Homo sapiens] 39 0.007
gi|21040314 SON DNA-binding protein isoform B [Homo sapiens] 39 0.007
gi|33186895 selenoprotein V [Homo sapiens] 39 0.007
gi|150170670 piccolo isoform 2 [Homo sapiens] 37 0.021
gi|150378539 piccolo isoform 1 [Homo sapiens] 37 0.021
gi|153945878 mucin 5, subtype B, tracheobronchial [Homo sapiens] 36 0.037
gi|83367077 mucin 16 [Homo sapiens] 36 0.048
gi|52630419 sterol regulatory element binding transcription fact... 34 0.14
gi|22547195 sterol regulatory element binding transcription fact... 34 0.14
gi|169211436 PREDICTED: hypothetical protein [Homo sapiens] 34 0.14
gi|24308352 DMRT-like family B with proline-rich C-terminal, 1 [... 34 0.14
gi|239751395 PREDICTED: hypothetical protein, partial [Homo sapi... 34 0.18
gi|239745904 PREDICTED: hypothetical protein, partial [Homo sapi... 34 0.18
gi|149158690 HLA-B associated transcript-2 [Homo sapiens] 34 0.18
gi|111955326 MLX interacting protein [Homo sapiens] 34 0.18
gi|148277037 AP2 associated kinase 1 [Homo sapiens] 33 0.24
gi|222418647 mucin 7, secreted precursor [Homo sapiens] 33 0.31
gi|169167057 PREDICTED: hypothetical protein [Homo sapiens] 33 0.31
gi|14790190 spen homolog, transcriptional regulator [Homo sapiens] 33 0.31
gi|222418649 mucin 7, secreted precursor [Homo sapiens] 33 0.31
gi|222418645 mucin 7, secreted precursor [Homo sapiens] 33 0.31
gi|126507091 LATS, large tumor suppressor, homolog 2 [Homo sapiens] 33 0.31
gi|146219843 Snf2-related CBP activator protein [Homo sapiens] 33 0.31
gi|239747120 PREDICTED: hypothetical protein XP_002343918 [Homo ... 33 0.40
gi|239747111 PREDICTED: hypothetical protein XP_002343913 [Homo ... 33 0.40
gi|222144249 dynein heavy chain domain 1 isoform 1 [Homo sapiens] 32 0.53
>gi|239753433 PREDICTED: hypothetical protein XP_002345652 [Homo
sapiens]
Length = 302
Score = 608 bits (1567), Expect = e-174
Identities = 302/302 (100%), Positives = 302/302 (100%)
Query: 1 MESSEGAWSPVRVCVATGKPKTVEEWTPASSFGSTYHWMASSGPTWATGPLAVPIPAPAP 60
MESSEGAWSPVRVCVATGKPKTVEEWTPASSFGSTYHWMASSGPTWATGPLAVPIPAPAP
Sbjct: 1 MESSEGAWSPVRVCVATGKPKTVEEWTPASSFGSTYHWMASSGPTWATGPLAVPIPAPAP 60
Query: 61 AALIGGSQKVLVILVGLLLLGIDIVILSRERLSKAPPTPGALSSPLPQLLLAEQEPGTPS 120
AALIGGSQKVLVILVGLLLLGIDIVILSRERLSKAPPTPGALSSPLPQLLLAEQEPGTPS
Sbjct: 61 AALIGGSQKVLVILVGLLLLGIDIVILSRERLSKAPPTPGALSSPLPQLLLAEQEPGTPS 120
Query: 121 STAQGLWEKTGHVITSWPQAGQSVAPDARPPTRGWRLHLQPSQAKPTPETLLQSTPSRLH 180
STAQGLWEKTGHVITSWPQAGQSVAPDARPPTRGWRLHLQPSQAKPTPETLLQSTPSRLH
Sbjct: 121 STAQGLWEKTGHVITSWPQAGQSVAPDARPPTRGWRLHLQPSQAKPTPETLLQSTPSRLH 180
Query: 181 RETCTLTAPGQGLFPTLGQAQTQTTGVSSEPILVQALLERTGKILWGGSCQGSGAKQTLT 240
RETCTLTAPGQGLFPTLGQAQTQTTGVSSEPILVQALLERTGKILWGGSCQGSGAKQTLT
Sbjct: 181 RETCTLTAPGQGLFPTLGQAQTQTTGVSSEPILVQALLERTGKILWGGSCQGSGAKQTLT 240
Query: 241 AFPLAGASLPFSASSTTSFFSFNLTLVVISELVSTAASDMVGHAGDPMQGIKKKARVQGL 300
AFPLAGASLPFSASSTTSFFSFNLTLVVISELVSTAASDMVGHAGDPMQGIKKKARVQGL
Sbjct: 241 AFPLAGASLPFSASSTTSFFSFNLTLVVISELVSTAASDMVGHAGDPMQGIKKKARVQGL 300
Query: 301 WR 302
WR
Sbjct: 301 WR 302
>gi|239743293 PREDICTED: mucin 12 [Homo sapiens]
Length = 5478
Score = 40.4 bits (93), Expect = 0.002
Identities = 48/167 (28%), Positives = 70/167 (41%), Gaps = 12/167 (7%)
Query: 116 PGTPSSTAQGLWEKTGHVITSWPQAGQSVAPDARPPTRGWRLHLQPSQAKPTPETLL-QS 174
PG+P+ST GL +T+ +S + + G +L S A+ T L+ +S
Sbjct: 1361 PGSPASTQTGL----PATLTTADLGEESTTFPSSSGSTGTKL----SPARSTTSGLVGES 1412
Query: 175 TPSRLH-RETCTLTAPGQGLFPTLGQAQTQ--TTGVSSEPILVQALLERTGKILWGGSCQ 231
TPSRL T T T PG P+L + T T+ S + L A +G +
Sbjct: 1413 TPSRLSPSSTETTTLPGSPTTPSLSEKSTTFYTSPRSPDATLSPATTTSSGVSEESSTSH 1472
Query: 232 GSGAKQTLTAFPLAGASLPFSASSTTSFFSFNLTLVVISELVSTAAS 278
TAFP + + S TTS S T +S +TA+S
Sbjct: 1473 SQPGSTHTTAFPDSTTTSDLSQEPTTSHSSQGSTEATLSPGSTTASS 1519
Score = 40.0 bits (92), Expect = 0.003
Identities = 48/167 (28%), Positives = 70/167 (41%), Gaps = 12/167 (7%)
Query: 116 PGTPSSTAQGLWEKTGHVITSWPQAGQSVAPDARPPTRGWRLHLQPSQAKPTPETLL-QS 174
PG+P+ST GL +T+ +S + + G +L S A+ T L+ +S
Sbjct: 4001 PGSPASTQTGL----PATLTTADLGEESTTFPSSSGSTGTKL----SPARSTTSGLVGES 4052
Query: 175 TPSRLH-RETCTLTAPGQGLFPTLGQAQTQ--TTGVSSEPILVQALLERTGKILWGGSCQ 231
TPSRL T T T PG P+L + T T+ S + L A +G +
Sbjct: 4053 TPSRLSPSSTETTTLPGSPTTPSLSEKSTTFYTSPRSPDATLSPATTTSSGVSEESSTSH 4112
Query: 232 GSGAKQTLTAFPLAGASLPFSASSTTSFFSFNLTLVVISELVSTAAS 278
TAFP + + S TTS S T +S +TA+S
Sbjct: 4113 SQPGSTHTTAFPDSTTTSGLSQEPTTSHSSQGSTEATLSPGSTTASS 4159
>gi|239508976 PREDICTED: mucin 12, cell surface associated [Homo
sapiens]
Length = 2036
Score = 40.4 bits (93), Expect = 0.002
Identities = 48/167 (28%), Positives = 70/167 (41%), Gaps = 12/167 (7%)
Query: 116 PGTPSSTAQGLWEKTGHVITSWPQAGQSVAPDARPPTRGWRLHLQPSQAKPTPETLL-QS 174
PG+P+ST GL +T+ +S + + G +L S A+ T L+ +S
Sbjct: 848 PGSPASTQTGL----PATLTTADLGEESTTFPSSSGSTGTKL----SPARSTTSGLVGES 899
Query: 175 TPSRLH-RETCTLTAPGQGLFPTLGQAQTQ--TTGVSSEPILVQALLERTGKILWGGSCQ 231
TPSRL T T T PG P+L + T T+ S + L A +G +
Sbjct: 900 TPSRLSPSSTETTTLPGSPTTPSLSEKSTTFYTSPRSPDATLSPATTTSSGVSEESSTSH 959
Query: 232 GSGAKQTLTAFPLAGASLPFSASSTTSFFSFNLTLVVISELVSTAAS 278
TAFP + + S TTS S T +S +TA+S
Sbjct: 960 SQPGSTHTTAFPDSTTTSDLSQEPTTSHSSQGSTEATLSPGSTTASS 1006
>gi|132626688 mediator of DNA-damage checkpoint 1 [Homo sapiens]
Length = 2089
Score = 40.0 bits (92), Expect = 0.003
Identities = 34/133 (25%), Positives = 52/133 (39%), Gaps = 15/133 (11%)
Query: 91 RLSKAPPTPGALSSPLPQLLLAEQEPGTPSSTAQGLWEKTGHVITSWPQAGQSVAPDARP 150
R S P P ++P P + +P TP T++ KT P+ + A D P
Sbjct: 1603 RSSVKTPEPVVPTAPEPHPTTSTDQPVTPKLTSRATRRKTNRSSVKTPKPVEPAASDLEP 1662
Query: 151 PTRGWRLHLQPSQAKPTPETLLQSTPSRLHRETCTLTAPGQGLFPTLGQAQTQTT---GV 207
T P+ TPE + Q S+ R + P PT + Q+ T +
Sbjct: 1663 FT--------PTDQSVTPEAIAQGGQSKTLRSSTVRAMP----VPTTPEFQSPVTTDQPI 1710
Query: 208 SSEPILVQALLER 220
S EPI + ++R
Sbjct: 1711 SPEPITQPSCIKR 1723
Score = 35.0 bits (79), Expect = 0.081
Identities = 36/152 (23%), Positives = 54/152 (35%), Gaps = 33/152 (21%)
Query: 93 SKAPPTPGALSSPLPQLLLAEQEPGTPSSTAQGLWEKTGHVITSWPQAGQSVAPDARPP- 151
S+ P P ++P P + +P TP T+Q +T P+ AP+ +P
Sbjct: 1113 SRMTPFPATSAAPEPHPSTSTAQPVTPKPTSQATRSRTNRSSVKTPEPVVPTAPELQPST 1172
Query: 152 --------------TRGWR---------------LHLQPSQAKPTP---ETLLQSTPSRL 179
TRG + L LQPS + P E Q+T R
Sbjct: 1173 STDQPVTSEPTSQVTRGRKSRSSVKTPETVVPTALELQPSTSTDRPVTSEPTSQATRGRK 1232
Query: 180 HRETCTLTAPGQGLFPTLGQAQTQTTGVSSEP 211
+R + P P L + + V+SEP
Sbjct: 1233 NRSSVKTPEPVVPTAPELQPSTSTDQPVTSEP 1264
Score = 32.0 bits (71), Expect = 0.69
Identities = 29/116 (25%), Positives = 43/116 (37%), Gaps = 10/116 (8%)
Query: 98 TPGALSSPLPQL--LLAEQEPGTPSSTAQGLWEKTGHVITSWPQAGQSVAPDARPPTRGW 155
TP L P+L + +P TP T+Q +T P+ AP+ +P T
Sbjct: 1403 TPETLVPTAPKLEPSTSTDQPVTPEPTSQATRGRTNRSSVKTPETVVPTAPELQPST--- 1459
Query: 156 RLHLQPSQAKPTPETLLQSTPSRLHRETCTLTAPGQGLFPTLGQAQTQTTGVSSEP 211
+ TPE Q+T R R + P L + + V+SEP
Sbjct: 1460 -----STDQPVTPEPTSQATRGRTDRSSVKTPETVVPTAPELQASASTDQPVTSEP 1510
Score = 28.5 bits (62), Expect = 7.6
Identities = 23/93 (24%), Positives = 40/93 (43%), Gaps = 14/93 (15%)
Query: 103 SSPLPQLLLAEQEPGTPSSTAQGLWEKTGHVITSWPQAGQSVAPDARPPTRGWRLHLQPS 162
++P Q+ + +P TP T++ +T P++ +AP+ P T +
Sbjct: 1328 TAPELQISTSTDQPVTPKPTSRTTRSRTNMSSVKNPESTVPIAPELPPST--------ST 1379
Query: 163 QAKPTPETLLQSTPSRLHR------ETCTLTAP 189
+ TPE ++T R +R ET TAP
Sbjct: 1380 EQPVTPEPTSRATRGRKNRSSGKTPETLVPTAP 1412
Score = 28.5 bits (62), Expect = 7.6
Identities = 23/101 (22%), Positives = 41/101 (40%), Gaps = 8/101 (7%)
Query: 89 RERLSKAPPTPGALSSPLPQLLLAEQEPGTPSSTAQGLWEKTGHVITSWPQAGQSVAPDA 148
+ R S P ++P Q + +P TP T++ +T P++ +AP+
Sbjct: 1519 KNRSSVKTPETVVPAAPELQPSTSTDQPVTPEPTSRATRGRTNRSSVKTPESIVPIAPEL 1578
Query: 149 RPPTRGWRLHLQPSQAKPTPETLLQSTPSRLHRETCTLTAP 189
+P T +L TPE ++T R +R + P
Sbjct: 1579 QPSTSRNQL--------VTPEPTSRATRCRTNRSSVKTPEP 1611
Score = 28.1 bits (61), Expect = 10.0
Identities = 29/103 (28%), Positives = 37/103 (35%), Gaps = 6/103 (5%)
Query: 89 RERLSKAPPTPGALSSPLPQLLLAEQEPGTPSSTAQGLWEKTGHVITSWPQAGQSVAPDA 148
+ R S P P ++P Q + +P T T Q + P+ AP+
Sbjct: 1232 KNRSSVKTPEPVVPTAPELQPSTSTDQPVTSEPTYQATRGRKNRSSVKTPEPVVPTAPEL 1291
Query: 149 RPPTRGWRLHLQPSQAKPTPETLLQST--PSRLHRETCTLTAP 189
RP T R P KPT T T S ET TAP
Sbjct: 1292 RPSTSTDR----PVTPKPTSRTTRSRTNMSSVKTPETVVPTAP 1330
>gi|21040326 SON DNA-binding protein isoform F [Homo sapiens]
Length = 2426
Score = 38.5 bits (88), Expect = 0.007
Identities = 36/127 (28%), Positives = 52/127 (40%), Gaps = 22/127 (17%)
Query: 96 PPTPGALSSPLPQLLLAEQEPGTPSSTAQGLWEKTGHVITSWPQAGQSVAPDARPPTRGW 155
P PG LS+P+P+L PG P++ E G +T PQ Q + P P+ G
Sbjct: 414 PELPGPLSTPVPEL------PGPPATAVP---ELPGPSVTPVPQLSQEL-PGLPAPSMG- 462
Query: 156 RLHLQPSQAKPTPETLLQSTPSRLHRETCTLTAPGQGLFPTLGQAQTQTTGVSSEPILVQ 215
L+P Q P P + Q P L T + P Q A T ++ +P+
Sbjct: 463 ---LEPPQEVPEPPVMAQELPG-LPLVTAAVELPEQ-------PAVTVAMELTEQPVTTT 511
Query: 216 ALLERTG 222
L + G
Sbjct: 512 ELEQPVG 518
>gi|21040314 SON DNA-binding protein isoform B [Homo sapiens]
Length = 2303
Score = 38.5 bits (88), Expect = 0.007
Identities = 36/127 (28%), Positives = 52/127 (40%), Gaps = 22/127 (17%)
Query: 96 PPTPGALSSPLPQLLLAEQEPGTPSSTAQGLWEKTGHVITSWPQAGQSVAPDARPPTRGW 155
P PG LS+P+P+L PG P++ E G +T PQ Q + P P+ G
Sbjct: 414 PELPGPLSTPVPEL------PGPPATAVP---ELPGPSVTPVPQLSQEL-PGLPAPSMG- 462
Query: 156 RLHLQPSQAKPTPETLLQSTPSRLHRETCTLTAPGQGLFPTLGQAQTQTTGVSSEPILVQ 215
L+P Q P P + Q P L T + P Q A T ++ +P+
Sbjct: 463 ---LEPPQEVPEPPVMAQELPG-LPLVTAAVELPEQ-------PAVTVAMELTEQPVTTT 511
Query: 216 ALLERTG 222
L + G
Sbjct: 512 ELEQPVG 518
>gi|33186895 selenoprotein V [Homo sapiens]
Length = 346
Score = 38.5 bits (88), Expect = 0.007
Identities = 47/209 (22%), Positives = 66/209 (31%), Gaps = 52/209 (24%)
Query: 15 VATGKPKTVEEWTPASSFGSTYHWMASSGPTWATGPLAVPIP------------------ 56
V T P + P + + P W P+ P+P
Sbjct: 61 VLTPAPAQIPTLVPTPALARIPRLVPPPAPAWIPTPVPTPVPVRNPTPVPTPARTLTPPV 120
Query: 57 ---APAPAALIGGSQKVLVILVGLLLLGIDIVILSRERLSKAPPTPGALSSPLPQLLLAE 113
APAPA L+ G + L +L L + + PP P P+L L
Sbjct: 121 RVPAPAPAQLLAGIRAALPVLDSYLAPALPL---------DPPP------EPAPELPLLP 165
Query: 114 QEPGTPS-------STAQGLWEKTGHVITSWPQAGQSVAPD------ARPPTRGWRLHLQ 160
+E P+ S + G + T P A S P A P G
Sbjct: 166 EEDPEPAPSLKLIPSVSSEAGPAPGPLPTRTPLAANSPGPTLDFTFRADPSAIGL---AD 222
Query: 161 PSQAKPTPETLLQSTPSRLHRETCTLTAP 189
P P P +L + PS + + CT T P
Sbjct: 223 PPIPSPVPSPILGTIPSAISLQNCTETFP 251
>gi|150170670 piccolo isoform 2 [Homo sapiens]
Length = 4935
Score = 37.0 bits (84), Expect = 0.021
Identities = 44/144 (30%), Positives = 57/144 (39%), Gaps = 27/144 (18%)
Query: 93 SKAPPTPGALSSPLPQ----LLLAEQEPGTPSSTAQGLW------EKTGHVITSWPQAGQ 142
+K P P L+ PL Q + Q PGT AQ L ++TG S Q G
Sbjct: 329 AKPPAQPSGLTKPLAQQPGTVKPPVQPPGTTKPPAQPLGPAKPPAQQTGSEKPSSEQPGP 388
Query: 143 SVAPDARPPTRGWRLHLQPSQAKP------TPETLLQ----STPSRLHRETCT-LTAPGQ 191
A+PP G QP AKP TP+ L Q +P++ T T + PG
Sbjct: 389 KAL--AQPPGVGKTPAQQPGPAKPPTQQVGTPKPLAQQPGLQSPAKAPGPTKTPVQQPGP 446
Query: 192 GLFPTL----GQAQTQTTGVSSEP 211
G P G+ Q TG + P
Sbjct: 447 GKIPAQQAGPGKTSAQQTGPTKPP 470
>gi|150378539 piccolo isoform 1 [Homo sapiens]
Length = 5142
Score = 37.0 bits (84), Expect = 0.021
Identities = 44/144 (30%), Positives = 57/144 (39%), Gaps = 27/144 (18%)
Query: 93 SKAPPTPGALSSPLPQ----LLLAEQEPGTPSSTAQGLW------EKTGHVITSWPQAGQ 142
+K P P L+ PL Q + Q PGT AQ L ++TG S Q G
Sbjct: 329 AKPPAQPSGLTKPLAQQPGTVKPPVQPPGTTKPPAQPLGPAKPPAQQTGSEKPSSEQPGP 388
Query: 143 SVAPDARPPTRGWRLHLQPSQAKP------TPETLLQ----STPSRLHRETCT-LTAPGQ 191
A+PP G QP AKP TP+ L Q +P++ T T + PG
Sbjct: 389 KAL--AQPPGVGKTPAQQPGPAKPPTQQVGTPKPLAQQPGLQSPAKAPGPTKTPVQQPGP 446
Query: 192 GLFPTL----GQAQTQTTGVSSEP 211
G P G+ Q TG + P
Sbjct: 447 GKIPAQQAGPGKTSAQQTGPTKPP 470
>gi|153945878 mucin 5, subtype B, tracheobronchial [Homo sapiens]
Length = 5765
Score = 36.2 bits (82), Expect = 0.037
Identities = 61/290 (21%), Positives = 98/290 (33%), Gaps = 44/290 (15%)
Query: 3 SSEGAWSPVRVCVATGKPKTVEEWT--PASSFGSTYHWMASSGPTWATGPLAVPIPAPAP 60
SS G + + +T T +T P+SS G+T W S T T ++ P+ P
Sbjct: 4502 SSPGTATALPALRSTATTPTATSFTAIPSSSLGTT--WTRLSQTTTPTATMSTATPSSTP 4559
Query: 61 AALIGGSQKVLVILVGLLLLGIDIVILSRERLSKAPPTPG-ALSSPLPQLLLA------E 113
+ +L + ++ TPG A ++ +P
Sbjct: 4560 ET----------VHTSTVLTATATTTGATGSVATPSSTPGTAHTTKVPTTTTTGFTATPS 4609
Query: 114 QEPGTPSSTAQGLWEKTGHVITSWPQAGQSVAPDARPPTRGWRLHLQP--------SQAK 165
PGT + + T T+ +G +V P + P T L S A
Sbjct: 4610 SSPGTALTPPVWISTTTTPTTTTPTTSGSTVTPSSIPGTTHTARVLTTTTTTVATGSMAT 4669
Query: 166 PTPETLLQSTPSRLHRETCTLTAPGQGLFPTLGQAQTQTTGVSSEPILVQALLERTGKIL 225
P+ T TP L T+TA G P+ T T V + A
Sbjct: 4670 PSSSTQTSGTPPSLTTTATTITATGSTTNPSSTPGTTPITPVLTSTATTPA--------- 4720
Query: 226 WGGSCQGSGAKQTLTAFPLAGASLPFSASSTTSFFSFNLTLVVISELVST 275
+ +K T ++ P +LP S+ T + + T + S L +T
Sbjct: 4721 ------ATSSKATSSSSPRTATTLPVLTSTATKSTATSFTPIPSSTLWTT 4764
Score = 31.6 bits (70), Expect = 0.90
Identities = 41/166 (24%), Positives = 60/166 (36%), Gaps = 9/166 (5%)
Query: 112 AEQEPGTPSSTAQGLWEKTG--HVITSWPQAGQSVAPDARPPTRGWRLHLQPSQAKPTPE 169
A TPSST W T T+ G + P + P T W L + A T
Sbjct: 4378 ATSSTSTPSSTPGTTWILTELTTAATTTAATGPTATPSSTPGTT-WILTELTTTATTTAS 4436
Query: 170 TLLQSTPSRLHRETCTLTAPGQGLFPTLGQAQTQTTGVSSEPILVQALLERTGKILWGGS 229
T +TPS T LT P T+ T T + QA +
Sbjct: 4437 TGSTATPSSTPGTTWILTEPSTTATVTVPTGSTATASST------QATAGTPHVSTTATT 4490
Query: 230 CQGSGAKQTLTAFPLAGASLPFSASSTTSFFSFNLTLVVISELVST 275
+ +K T ++ P +LP S+ T+ + + T + S L +T
Sbjct: 4491 PTVTSSKATPSSSPGTATALPALRSTATTPTATSFTAIPSSSLGTT 4536
Score = 28.5 bits (62), Expect = 7.6
Identities = 49/209 (23%), Positives = 71/209 (33%), Gaps = 30/209 (14%)
Query: 3 SSEGAWSPVRVCVATGKPKTVEEWT--PASSFGSTYHWMASSGPTWATGPLAVPIPAPAP 60
SS G + + +T T +T P+SS G+T W S T T ++ P+ P
Sbjct: 2517 SSPGTATALPALRSTATTPTATSFTAIPSSSLGTT--WTRLSQTTTPTATMSTATPSSTP 2574
Query: 61 AALIGGSQKVLVILVGLLLLGIDIVILSRERLSKAPPTPGALSSPLPQLLLAEQEPGTPS 120
+ +L + ++ TPG + TPS
Sbjct: 2575 ET----------VHTSTVLTTTATTTGATGSVATPSSTPGTAHTTKVLTTTTTGFTATPS 2624
Query: 121 S---TAQGL--WEKTGHVITSWPQAGQSVAPDARPPTRGWRLHLQP--------SQAKPT 167
S TA+ L W T T+ G +V P + P T L S A P+
Sbjct: 2625 SSPGTARTLPVWISTTTTPTT---RGSTVTPSSIPGTTHTPTVLTTTTTTVATGSMATPS 2681
Query: 168 PETLLQSTPSRLHRETCTLTAPGQGLFPT 196
T TP L T+TA G P+
Sbjct: 2682 SSTQTSGTPPSLTTTATTITATGSTTNPS 2710
>gi|83367077 mucin 16 [Homo sapiens]
Length = 14507
Score = 35.8 bits (81), Expect = 0.048
Identities = 65/264 (24%), Positives = 94/264 (35%), Gaps = 45/264 (17%)
Query: 10 PVRVCVATGKPKTVEEW--------TPASSFGSTY-HWMASSGPTWATGPLAVPIPAPAP 60
P+R V + +P T+ W TP S S++ H + P AT P A
Sbjct: 11675 PIRT-VPSSEPDTMASWVTHPPQTSTPVSRTTSSFSHSSPDATPVMATSPRTEASSAVLT 11733
Query: 61 AALIGGSQKVLVILVGLLLLGIDIVILSRERLSKAPPTPGALSSPLPQLLLAEQEPGTPS 120
G + V S+ + A S+ +P L PG P
Sbjct: 11734 TISPGAPEMVT---------------------SQITSSGAATSTTVPTLT---HSPGMPE 11769
Query: 121 STA------QGLWEKTGHVITSWPQAGQSVAPDARPPTRGWRLHLQPSQAKPTPETLLQS 174
+TA + KT T +PQ ++ A P L P+Q + TLL +
Sbjct: 11770 TTALLSTHPRTETSKTFPASTVFPQVSETTASLTIRPGAETSTAL-PTQTTSSLFTLLVT 11828
Query: 175 TPSRLHRETCTLTAPGQGLFPTLGQAQTQTTGVSSEPILVQALLERTGKILWGGSCQGSG 234
SR+ P T+T+ + L LLE TG + S + S
Sbjct: 11829 GTSRVDLSPTASPGVSAKTAPLSTHPGTETSTMIPTSTLSLGLLETTGLLATSSSAETST 11888
Query: 235 AKQTLTAFP-LAGASLPFSASSTT 257
+ TLT P ++G S SAS TT
Sbjct: 11889 STLTLTVSPAVSGLS---SASITT 11909
Score = 28.9 bits (63), Expect = 5.8
Identities = 59/265 (22%), Positives = 87/265 (32%), Gaps = 37/265 (13%)
Query: 27 TPASSFGSTYHWMASSGPTWATGPLAVPIPAPAPAALIGGSQKVLVILVGLLLLGIDIVI 86
TP S F ST +S PT A+P+ A P + + S +V
Sbjct: 2624 TPPSKFPSTGTLSGASFPTLLPDTPAIPLTATEPTSSLATS-----------FDSTPLVT 2672
Query: 87 LSRERLSKAPPTPGALS-----SPLPQLLLAEQEPGTPSSTAQGLWEKTGHVITSWP--- 138
++ + L P T +S L ++ + P T QG+ E H ++ P
Sbjct: 2673 IASDSLGTVPETTLTMSETSNGDALVLKTVSNPDRSIPGITIQGVTESPLHPSSTSPSKI 2732
Query: 139 --------QAGQSVAPDARPPTRGWRLHLQPSQAKPTPETLLQSTPSRLHRETCTLTAPG 190
+ +VA P L S L+ S+ LT
Sbjct: 2733 VAPRNTTYEGSITVALSTLPAGTTGSLVFSQSSENSETTALVDSSAGLERASVMPLTTGS 2792
Query: 191 QGLFPTLG--QAQTQTTGV---SSEPIL-----VQALLERTGKILWGGSCQGSGAKQTLT 240
QG+ + G T +TG SS P+ V A+ E T L
Sbjct: 2793 QGMASSGGIRSGSTHSTGTKTFSSLPLTMNPGEVTAMSEITTNRLTATQSTAPKGIPVKP 2852
Query: 241 AFPLAGASLPFSASSTTSFFSFNLT 265
+G P SASS+ S +LT
Sbjct: 2853 TSAESGLLTPVSASSSPSKAFASLT 2877
>gi|52630419 sterol regulatory element binding transcription factor
1 isoform a [Homo sapiens]
Length = 1177
Score = 34.3 bits (77), Expect = 0.14
Identities = 60/261 (22%), Positives = 93/261 (35%), Gaps = 28/261 (10%)
Query: 42 SGPTWATGPLAVPIPAPAPAALIGGSQKVLVILVGLLLLGIDIVILSRERLSKAPPTPGA 101
SGP A PL+ P PAP P + S G+ + + IL + P PGA
Sbjct: 118 SGPQAAPSPLSPPQPAPTPLKMY-PSMPAFSPGPGIKEESVPLSIL---QTPTPQPLPGA 173
Query: 102 LSSPLPQLLLAEQEPGTPSSTAQGLWEKTGHVITSWPQAGQSVAPDARPPTRGWRLHLQP 161
L LPQ A P S+ G G T P + + P G L P
Sbjct: 174 L---LPQSFPAPAPPQFSSTPVLGYPSPPGGFSTGSPPG------NTQQPLPGLPLASPP 224
Query: 162 SQAKPTPETLLQSTPSRLHRETCTLTAPGQGLFPTLGQAQTQTTG-VSSEPILVQALLER 220
+ T +QS + ++ T+TA PT T T + P+L+Q +
Sbjct: 225 GVPPVSLHTQVQSV---VPQQLLTVTAA-----PTAAPVTTTVTSQIQQVPVLLQPHFIK 276
Query: 221 TGKILW------GGSCQGSGAKQTLTAFPLAGASLPFSASSTTSFFSFNLTLVVISELVS 274
+L G + + +G ++ + LP S T + L + ++
Sbjct: 277 ADSLLLTAMKTDGATVKAAGLSPLVSGTTVQTGPLPTLVSGGTILATVPLVVDAEKLPIN 336
Query: 275 TAASDMVGHAGDPMQGIKKKA 295
A+ A +G K+ A
Sbjct: 337 RLAAGSKAPASAQSRGEKRTA 357
>gi|22547195 sterol regulatory element binding transcription factor
1 isoform b [Homo sapiens]
Length = 1147
Score = 34.3 bits (77), Expect = 0.14
Identities = 60/261 (22%), Positives = 93/261 (35%), Gaps = 28/261 (10%)
Query: 42 SGPTWATGPLAVPIPAPAPAALIGGSQKVLVILVGLLLLGIDIVILSRERLSKAPPTPGA 101
SGP A PL+ P PAP P + S G+ + + IL + P PGA
Sbjct: 88 SGPQAAPSPLSPPQPAPTPLKMY-PSMPAFSPGPGIKEESVPLSIL---QTPTPQPLPGA 143
Query: 102 LSSPLPQLLLAEQEPGTPSSTAQGLWEKTGHVITSWPQAGQSVAPDARPPTRGWRLHLQP 161
L LPQ A P S+ G G T P + + P G L P
Sbjct: 144 L---LPQSFPAPAPPQFSSTPVLGYPSPPGGFSTGSPPG------NTQQPLPGLPLASPP 194
Query: 162 SQAKPTPETLLQSTPSRLHRETCTLTAPGQGLFPTLGQAQTQTTG-VSSEPILVQALLER 220
+ T +QS + ++ T+TA PT T T + P+L+Q +
Sbjct: 195 GVPPVSLHTQVQSV---VPQQLLTVTAA-----PTAAPVTTTVTSQIQQVPVLLQPHFIK 246
Query: 221 TGKILW------GGSCQGSGAKQTLTAFPLAGASLPFSASSTTSFFSFNLTLVVISELVS 274
+L G + + +G ++ + LP S T + L + ++
Sbjct: 247 ADSLLLTAMKTDGATVKAAGLSPLVSGTTVQTGPLPTLVSGGTILATVPLVVDAEKLPIN 306
Query: 275 TAASDMVGHAGDPMQGIKKKA 295
A+ A +G K+ A
Sbjct: 307 RLAAGSKAPASAQSRGEKRTA 327
>gi|169211436 PREDICTED: hypothetical protein [Homo sapiens]
Length = 280
Score = 34.3 bits (77), Expect = 0.14
Identities = 51/197 (25%), Positives = 67/197 (34%), Gaps = 34/197 (17%)
Query: 28 PASSFGSTYHWMASSGPTWATGP-----LAVPIPAPA-PAALIGGSQKVLVILVGLLLLG 81
P S G T +W++S G TGP + P P+ P L + L L
Sbjct: 23 PGESGGRTGNWVSSVGEM--TGPYGPREMGTPTLTPSSPPTLTPSNTPTLTPCSTPTLTP 80
Query: 82 IDIVILSRERLSKAPP--TPGALSSPLPQLLLAEQEPGTPSSTAQGLWEKTGHVITSWPQ 139
L+ P TP S P L + TPSST T P
Sbjct: 81 CSTPTLTPSNTPTLTPSSTPTLTPSSTPTLTPSSTPTLTPSSTP-----------TLTPS 129
Query: 140 AGQSVAPDARPPTRGWRLHLQPSQAKPTPETLLQSTPSRLHRETCTLTAPGQGLFPTLGQ 199
+ ++ P + P TP STP+ T TLT PTL
Sbjct: 130 STPTLTPSSTPTLT----------RSSTPTLTPSSTPTLTPSSTPTLTPSST---PTLTP 176
Query: 200 AQTQTTGVSSEPILVQA 216
+ T T SS PIL ++
Sbjct: 177 SSTPTLTPSSRPILTRS 193
>gi|24308352 DMRT-like family B with proline-rich C-terminal, 1
[Homo sapiens]
Length = 342
Score = 34.3 bits (77), Expect = 0.14
Identities = 20/60 (33%), Positives = 27/60 (45%), Gaps = 1/60 (1%)
Query: 105 PLPQLLLAEQEPGTPSSTAQ-GLWEKTGHVITSWPQAGQSVAPDARPPTRGWRLHLQPSQ 163
P+P L PGTPS A G + P G++ P A P G R H++PS+
Sbjct: 89 PVPAASLRPLSPGTPSGDADPGPEGRAAACFFEQPPRGRNPGPRALQPVLGGRSHVEPSE 148
>gi|239751395 PREDICTED: hypothetical protein, partial [Homo
sapiens]
Length = 306
Score = 33.9 bits (76), Expect = 0.18
Identities = 38/120 (31%), Positives = 47/120 (39%), Gaps = 18/120 (15%)
Query: 98 TPGALSSPLPQLLLAEQEPGTPSSTAQGLWEKTGHVITSWPQAGQSVAPDARPP-TRGWR 156
TP S P L + TPSST T P + ++ P +RP TR
Sbjct: 109 TPTLTPSNTPTLTPSNTPTLTPSSTP-----------TLTPSSTPTLTPSSRPILTRSST 157
Query: 157 LHLQPSQAKPTPETLLQSTPSRLHRETCTLTAPGQGLFPTLGQAQTQTTGVSSEPILVQA 216
L PS P STP+ T TLT PTL + T T SS PIL ++
Sbjct: 158 PTLTPSSR---PILTRSSTPTLTPSSTPTLTPSST---PTLTPSSTPTLTPSSRPILTRS 211
Score = 32.7 bits (73), Expect = 0.40
Identities = 40/125 (32%), Positives = 52/125 (41%), Gaps = 17/125 (13%)
Query: 96 PPTPGALS-SPLPQLLLAEQEPGTPSSTAQGLWEKTGHVITSWPQAGQSVAPD---ARPP 151
P +P L+ S P L + TPSST L + +T P +S P + PP
Sbjct: 44 PSSPPTLTPSNTPTLTPSNTPTLTPSSTPT-LTPSSTPTLTPQPILTRSSTPTLTPSSPP 102
Query: 152 TRGWRLHLQPSQAKPTPETLLQSTPSRLHRETCTLTAPGQGLFPTLGQAQTQTTGVSSEP 211
T L PS TP +TP+ T TLT PTL + T T SS P
Sbjct: 103 T------LTPSN---TPTLTPSNTPTLTPSNTPTLTPSST---PTLTPSSTPTLTPSSRP 150
Query: 212 ILVQA 216
IL ++
Sbjct: 151 ILTRS 155
>gi|239745904 PREDICTED: hypothetical protein, partial [Homo
sapiens]
Length = 306
Score = 33.9 bits (76), Expect = 0.18
Identities = 38/120 (31%), Positives = 47/120 (39%), Gaps = 18/120 (15%)
Query: 98 TPGALSSPLPQLLLAEQEPGTPSSTAQGLWEKTGHVITSWPQAGQSVAPDARPP-TRGWR 156
TP S P L + TPSST T P + ++ P +RP TR
Sbjct: 109 TPTLTPSNTPTLTPSNTPTLTPSSTP-----------TLTPSSTPTLTPSSRPILTRSST 157
Query: 157 LHLQPSQAKPTPETLLQSTPSRLHRETCTLTAPGQGLFPTLGQAQTQTTGVSSEPILVQA 216
L PS P STP+ T TLT PTL + T T SS PIL ++
Sbjct: 158 PTLTPSSR---PILTRSSTPTLTPSSTPTLTPSST---PTLTPSSTPTLTPSSRPILTRS 211
Score = 32.7 bits (73), Expect = 0.40
Identities = 40/125 (32%), Positives = 52/125 (41%), Gaps = 17/125 (13%)
Query: 96 PPTPGALS-SPLPQLLLAEQEPGTPSSTAQGLWEKTGHVITSWPQAGQSVAPD---ARPP 151
P +P L+ S P L + TPSST L + +T P +S P + PP
Sbjct: 44 PSSPPTLTPSNTPTLTPSNTPTLTPSSTPT-LTPSSTPTLTPQPILTRSSTPTLTPSSPP 102
Query: 152 TRGWRLHLQPSQAKPTPETLLQSTPSRLHRETCTLTAPGQGLFPTLGQAQTQTTGVSSEP 211
T L PS TP +TP+ T TLT PTL + T T SS P
Sbjct: 103 T------LTPSN---TPTLTPSNTPTLTPSNTPTLTPSST---PTLTPSSTPTLTPSSRP 150
Query: 212 ILVQA 216
IL ++
Sbjct: 151 ILTRS 155
>gi|149158690 HLA-B associated transcript-2 [Homo sapiens]
Length = 2157
Score = 33.9 bits (76), Expect = 0.18
Identities = 26/82 (31%), Positives = 32/82 (39%), Gaps = 6/82 (7%)
Query: 95 APPTPGALSSPLPQLLLAE-----QEPGTPSSTAQGLWEKTGHVITSWPQAGQSVAPDAR 149
APP PGA SP P A G PS +G V W +S+AP +
Sbjct: 1138 APPPPGAPPSPAPARFTARGGRVFTPRGVPSRRGRGGGRPPPQVCPGWSPPAKSLAP-KK 1196
Query: 150 PPTRGWRLHLQPSQAKPTPETL 171
PPT +P + K P L
Sbjct: 1197 PPTGPLPPSKEPLKEKLIPGPL 1218
>gi|111955326 MLX interacting protein [Homo sapiens]
Length = 919
Score = 33.9 bits (76), Expect = 0.18
Identities = 31/120 (25%), Positives = 46/120 (38%), Gaps = 17/120 (14%)
Query: 111 LAEQEPGTPSSTAQGLWEKTGHVITSWPQAGQSVAPDARPPTRGWRLHLQP--SQAKPTP 168
L P T S +QGL T H S G +++P RPP QP + P P
Sbjct: 492 LTHDAPATTFSQSQGLVITTHHPAPSAAPCGLALSPVTRPP--------QPRLTFVHPKP 543
Query: 169 ETLLQSTPSRLHR-------ETCTLTAPGQGLFPTLGQAQTQTTGVSSEPILVQALLERT 221
+L P + H+ E +L + P Q Q ++S P+ + +L T
Sbjct: 544 VSLTGGRPKQPHKIVPAPKPEPVSLVLKNARIAPAAFSGQPQAVIMTSGPLKREGMLAST 603
>gi|148277037 AP2 associated kinase 1 [Homo sapiens]
Length = 961
Score = 33.5 bits (75), Expect = 0.24
Identities = 42/155 (27%), Positives = 62/155 (40%), Gaps = 12/155 (7%)
Query: 79 LLGIDIVILSRERLSKAPPTPGALSSPLPQLLLAEQEPGTPSSTAQGLWEKTGHVITSWP 138
+L I + R+R + PP A SS P LL + +P + +Q L +
Sbjct: 381 ILPIQPALTPRKRATVQPPPQAAGSSNQPGLLASVPQPKPQAPPSQPLPQ---------T 431
Query: 139 QAGQSVAPDARPPTRGWRLHLQPSQAKPTPETLLQSTPSRLHRETCTLTAPGQ--GLFPT 196
QA Q AP T + P+QA+ TP+ Q + ++ A Q G F
Sbjct: 432 QAKQPQAPPTPQQTPSTQAQGLPAQAQATPQHQQQLFLKQQQQQQQPPPAQQQPAGTFYQ 491
Query: 197 LGQAQTQTTGVSSEPILVQALLERTGKILWGGSCQ 231
QAQTQ + P Q + + + GGS Q
Sbjct: 492 QQQAQTQQF-QAVHPATQQPAIAQFPVVSQGGSQQ 525
>gi|222418647 mucin 7, secreted precursor [Homo sapiens]
Length = 377
Score = 33.1 bits (74), Expect = 0.31
Identities = 36/121 (29%), Positives = 42/121 (34%), Gaps = 28/121 (23%)
Query: 95 APPTPGALSSPLPQLLLAEQE----PGTPSSTAQGLWEKTGHVITSWPQAGQSVAPDARP 150
APPTP A ++P P A E P TPS+T Q P + A P
Sbjct: 168 APPTPSA-TTPAPPSSSAPPETTAAPPTPSATTQAP-----------PSSSAPPETTAAP 215
Query: 151 PTRGWRLHLQPSQAKPTPETLLQSTPSRLHRETCTLTAPGQGLFPTLGQAQTQTTGVSSE 210
PT PS + P T TPS T P P A +TT V
Sbjct: 216 PTPPATTPAPPSSSAPPETTAAPPTPS--------ATTPA----PLSSSAPPETTAVPPT 263
Query: 211 P 211
P
Sbjct: 264 P 264
>gi|169167057 PREDICTED: hypothetical protein [Homo sapiens]
Length = 320
Score = 33.1 bits (74), Expect = 0.31
Identities = 28/86 (32%), Positives = 38/86 (44%), Gaps = 10/86 (11%)
Query: 94 KAPPTPGALSSPLPQLLLAEQEPGTPSSTAQGLWEKTGHVITSWPQAGQSVAPDARPPTR 153
+APP P A SPLP+ A P P A + V+++ P +G DARP
Sbjct: 176 RAPPLPPARRSPLPRAACA--HPRRPRPLAGTTFCGGARVLSNPPPSGS--GGDARPSP- 230
Query: 154 GWRLHLQPSQAKPTPETLLQSTPSRL 179
L P + + T +L Q TP L
Sbjct: 231 -----LVPRRCRATSASLPQETPFAL 251
>gi|14790190 spen homolog, transcriptional regulator [Homo sapiens]
Length = 3664
Score = 33.1 bits (74), Expect = 0.31
Identities = 15/45 (33%), Positives = 23/45 (51%)
Query: 40 ASSGPTWATGPLAVPIPAPAPAALIGGSQKVLVILVGLLLLGIDI 84
A + PT P+ VP+P PAPA G ++L + L G+ +
Sbjct: 3239 AKAAPTPTPAPVPVPVPLPAPAPAPHGEARILTVTPSNQLQGLPL 3283
>gi|222418649 mucin 7, secreted precursor [Homo sapiens]
Length = 377
Score = 33.1 bits (74), Expect = 0.31
Identities = 36/121 (29%), Positives = 42/121 (34%), Gaps = 28/121 (23%)
Query: 95 APPTPGALSSPLPQLLLAEQE----PGTPSSTAQGLWEKTGHVITSWPQAGQSVAPDARP 150
APPTP A ++P P A E P TPS+T Q P + A P
Sbjct: 168 APPTPSA-TTPAPPSSSAPPETTAAPPTPSATTQAP-----------PSSSAPPETTAAP 215
Query: 151 PTRGWRLHLQPSQAKPTPETLLQSTPSRLHRETCTLTAPGQGLFPTLGQAQTQTTGVSSE 210
PT PS + P T TPS T P P A +TT V
Sbjct: 216 PTPPATTPAPPSSSAPPETTAAPPTPS--------ATTPA----PLSSSAPPETTAVPPT 263
Query: 211 P 211
P
Sbjct: 264 P 264
>gi|222418645 mucin 7, secreted precursor [Homo sapiens]
Length = 377
Score = 33.1 bits (74), Expect = 0.31
Identities = 36/121 (29%), Positives = 42/121 (34%), Gaps = 28/121 (23%)
Query: 95 APPTPGALSSPLPQLLLAEQE----PGTPSSTAQGLWEKTGHVITSWPQAGQSVAPDARP 150
APPTP A ++P P A E P TPS+T Q P + A P
Sbjct: 168 APPTPSA-TTPAPPSSSAPPETTAAPPTPSATTQAP-----------PSSSAPPETTAAP 215
Query: 151 PTRGWRLHLQPSQAKPTPETLLQSTPSRLHRETCTLTAPGQGLFPTLGQAQTQTTGVSSE 210
PT PS + P T TPS T P P A +TT V
Sbjct: 216 PTPPATTPAPPSSSAPPETTAAPPTPS--------ATTPA----PLSSSAPPETTAVPPT 263
Query: 211 P 211
P
Sbjct: 264 P 264
>gi|126507091 LATS, large tumor suppressor, homolog 2 [Homo sapiens]
Length = 1088
Score = 33.1 bits (74), Expect = 0.31
Identities = 19/59 (32%), Positives = 26/59 (44%), Gaps = 1/59 (1%)
Query: 42 SGPTWATGPLAVPIPAPAPAAL-IGGSQKVLVILVGLLLLGIDIVILSRERLSKAPPTP 99
S P W P P PAPAPAA + ++ + L G +D+ +R PP P
Sbjct: 461 SHPAWVPAPAPAPAPAPAPAAEGLDAKEEHALALGGAGAFPLDVEYGGPDRRCPPPPYP 519
>gi|146219843 Snf2-related CBP activator protein [Homo sapiens]
Length = 3230
Score = 33.1 bits (74), Expect = 0.31
Identities = 36/132 (27%), Positives = 49/132 (37%), Gaps = 14/132 (10%)
Query: 95 APPTPGALSSPLPQLLLAEQEPG----TPSSTAQG------LWEKTGHVITSWPQAGQSV 144
A PTPG + LP L+ P P+S G L +G + P +
Sbjct: 1034 AQPTPGPVPQVLPASLMVSASPAGPPLIPASRPPGPVLLPPLQPNSGSLPQVLPSPLGVL 1093
Query: 145 APDARPPTRGWRLHLQPSQAKPTPETLLQSTPSRLHRETCTLTAPGQGLFPTLGQAQTQT 204
+ +RPPT L L+P+ P P L + P LT P FP T T
Sbjct: 1094 SGTSRPPTP--TLSLKPT--PPAPVRLSPAPPPGSSSLLKPLTVPPGYTFPPAAATTTST 1149
Query: 205 TGVSSEPILVQA 216
T ++ V A
Sbjct: 1150 TTATATTTAVPA 1161
Score = 32.0 bits (71), Expect = 0.69
Identities = 56/246 (22%), Positives = 81/246 (32%), Gaps = 25/246 (10%)
Query: 27 TPASSFGSTYHWMASSGPTWATGPLAVPIPAPAPAALIGGSQKVLVILVGLLLLGID--- 83
TP + + + + P PL V P+P A ++ SQ + ++ G
Sbjct: 1585 TPLAPMAAPQTAILAPSPAPPLAPLPVLAPSPGAAPVLASSQTPVPVMAPSSTPGTSLAS 1644
Query: 84 ---------IVILSRERLSKAPPTPGALSSPLPQLLLAEQEPGTP----SSTAQGLWEKT 130
++ S + P P L SP LA P SS +Q L T
Sbjct: 1645 ASPVPAPTPVLAPSSTQTMLPAPVPSPLPSPASTQTLALAPALAPTLGGSSPSQTLSLGT 1704
Query: 131 GHVITSWPQAGQSVAP-DARPPTRGWRLHLQPSQAKPTPETLLQSTPSRLHRETCTLTAP 189
G+ +P S+ P + PT L L P +TL + L AP
Sbjct: 1705 GNPQGPFPTQTLSLTPASSLVPTPAQTLSLAPGPPLGPTQTLSLAPAPPL--------AP 1756
Query: 190 GQGLFPTLGQAQTQTTGVSSEPILVQALLERTGKILWGGSCQGSGAKQTLTAFPLAGASL 249
+ P T SS +L A ++ G A QTL P + S
Sbjct: 1757 ASPVGPAPAHTLTLAPASSSASLLAPASVQTLTLSPAPVPTLGPAAAQTLALAPASTQSP 1816
Query: 250 PFSASS 255
ASS
Sbjct: 1817 ASQASS 1822
>gi|239747120 PREDICTED: hypothetical protein XP_002343918 [Homo
sapiens]
Length = 139
Score = 32.7 bits (73), Expect = 0.40
Identities = 27/96 (28%), Positives = 35/96 (36%), Gaps = 16/96 (16%)
Query: 95 APPTPGALSSPLPQLLLAEQEPGTPSSTAQGLWEKTGHVITSWPQAGQSVAPDARPPTRG 154
AP PG L P P+S GLW + + W A + AP
Sbjct: 57 APSGPGLWQQRTQPLASWTMAPEDPASLRHGLWHQRTQPLAPWTMAAEDPAP-------- 108
Query: 155 WRLHLQPSQAKPTPETLLQSTPSRLHRETCTLTAPG 190
WR L+ S+ TP+ + LHR T PG
Sbjct: 109 WRPGLRHSR---TPQHRV-----LLHRRTLAGLRPG 136
>gi|239747111 PREDICTED: hypothetical protein XP_002343913 [Homo
sapiens]
Length = 139
Score = 32.7 bits (73), Expect = 0.40
Identities = 27/96 (28%), Positives = 35/96 (36%), Gaps = 16/96 (16%)
Query: 95 APPTPGALSSPLPQLLLAEQEPGTPSSTAQGLWEKTGHVITSWPQAGQSVAPDARPPTRG 154
AP PG L P P+S GLW + + W A + AP
Sbjct: 57 APSGPGLWQQRTQPLASWTMAPEDPASLRHGLWHQRTQPLAPWTMAAEDPAP-------- 108
Query: 155 WRLHLQPSQAKPTPETLLQSTPSRLHRETCTLTAPG 190
WR L+ S+ TP+ + LHR T PG
Sbjct: 109 WRPGLRHSR---TPQHRV-----LLHRRTLAGLRPG 136
>gi|222144249 dynein heavy chain domain 1 isoform 1 [Homo sapiens]
Length = 4753
Score = 32.3 bits (72), Expect = 0.53
Identities = 28/99 (28%), Positives = 45/99 (45%), Gaps = 7/99 (7%)
Query: 76 GLLLLGIDIVILSRERLSKA-PPTPGALSSPLPQLLLAEQEPGTPSSTAQGLWEKTGHVI 134
GLLL+G+ ++ + ++ A +P + SPLP + ++ Q PGT A +
Sbjct: 4650 GLLLIGLQVLHAEWDPIAGALQDSPSSQPSPLPPVSISTQAPGTSDLPA-----PADLTV 4704
Query: 135 TSWPQAGQSVAPDARPPTRGWRLHLQPSQAKPTPETLLQ 173
S P A+ +R +HL P K TP T +Q
Sbjct: 4705 YSCPVYMGGPLGTAKLQSRNIVMHL-PLPTKLTPNTCVQ 4742
Database: hs.faa
Posted date: Aug 4, 2009 4:42 PM
Number of letters in database: 18,247,518
Number of sequences in database: 37,866
Lambda K H
0.314 0.129 0.396
Gapped
Lambda K H
0.267 0.0410 0.140
Matrix: BLOSUM62
Gap Penalties: Existence: 11, Extension: 1
Number of Hits to DB: 13,633,637
Number of Sequences: 37866
Number of extensions: 736346
Number of successful extensions: 2945
Number of sequences better than 10.0: 30
Number of HSP's better than 10.0 without gapping: 13
Number of HSP's successfully gapped in prelim test: 130
Number of HSP's that attempted gapping in prelim test: 2783
Number of HSP's gapped (non-prelim): 309
length of query: 302
length of database: 18,247,518
effective HSP length: 102
effective length of query: 200
effective length of database: 14,385,186
effective search space: 2877037200
effective search space used: 2877037200
T: 11
A: 40
X1: 16 ( 7.2 bits)
X2: 38 (14.6 bits)
X3: 64 (24.7 bits)
S1: 42 (22.0 bits)
S2: 61 (28.1 bits)
Search results were obtained with NCBI BLAST and RefSeq entries.
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Guide to the Human Genome
Copyright © 2010 by Stewart Scherer. All rights reserved.