Search of human proteins with 239753240

Search of human proteins with 239753240

BLASTP 2.2.11 [Jun-05-2005]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= gi|239753240 PREDICTED: hypothetical protein XP_002345595 [Homo
sapiens]
         (180 letters)

Database: hs.faa 
           37,866 sequences; 18,247,518 total letters

Searching..................................................done

                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

gi|239753240 PREDICTED: hypothetical protein XP_002345595 [Homo ...   364   e-101
gi|239747803 PREDICTED: hypothetical protein XP_002348320 [Homo ...   364   e-101
gi|239741677 PREDICTED: hypothetical protein XP_002342280 [Homo ...   364   e-101
gi|118572613 splicing coactivator subunit SRm300 [Homo sapiens]        47   7e-06
gi|88758580 cyclin L2 isoform A [Homo sapiens]                         44   1e-04
gi|239752594 PREDICTED: hypothetical protein, partial [Homo sapi...    39   0.002
gi|42821110 hypothetical protein LOC340602 [Homo sapiens]              39   0.002
gi|16905517 FUS interacting protein (serine-arginine rich) 1 iso...    39   0.003
gi|239755146 PREDICTED: hypothetical protein [Homo sapiens]            38   0.005
gi|239741486 PREDICTED: hypothetical protein XP_002342213 [Homo ...    38   0.005
gi|72534660 splicing factor, arginine/serine-rich 7 [Homo sapiens]     38   0.005
gi|88501738 TRIO and F-actin binding protein isoform 6 [Homo sap...    38   0.005
gi|239749627 PREDICTED: hypothetical protein XP_002347107 [Homo ...    37   0.009
gi|239743902 PREDICTED: hypothetical protein XP_002342970 [Homo ...    37   0.009
gi|239753698 PREDICTED: hypothetical protein [Homo sapiens]            36   0.016
gi|239748278 PREDICTED: hypothetical protein [Homo sapiens]            36   0.016
gi|9558733 transformer-2 alpha [Homo sapiens]                          36   0.016
gi|42741684 zinc finger protein 265 isoform 1 [Homo sapiens]           36   0.020
gi|195539372 ADAM metallopeptidase with thrombospondin type 1 mo...    36   0.020
gi|20127499 arginine/serine-rich splicing factor 6 [Homo sapiens]      35   0.027
gi|33667117 MICAL-like 2 isoform 1 [Homo sapiens]                      35   0.027
gi|5802982 proline-rich nuclear receptor coactivator 1 [Homo sap...    35   0.035
gi|122937227 U2-associated SR140 protein [Homo sapiens]                35   0.035
gi|42741682 zinc finger protein 265 isoform 2 [Homo sapiens]           35   0.045
gi|32140760 collagen, type XXVII, alpha 1 [Homo sapiens]               34   0.059
gi|21361282 splicing factor, arginine/serine-rich 4 [Homo sapiens]     34   0.077
gi|239754748 PREDICTED: hypothetical protein [Homo sapiens]            34   0.077
gi|239754668 PREDICTED: mucin 12 [Homo sapiens]                        34   0.077
gi|239749196 PREDICTED: hypothetical protein XP_002346951 [Homo ...    34   0.077
gi|239743276 PREDICTED: hypothetical protein XP_002342815 [Homo ...    34   0.077

>gi|239753240 PREDICTED: hypothetical protein XP_002345595 [Homo
           sapiens]
          Length = 180

 Score =  364 bits (935), Expect = e-101
 Identities = 180/180 (100%), Positives = 180/180 (100%)

Query: 1   MVASPSSSMALVVPYTSITAQSGAPTGTPSRSRSRQPALTLAKRQPRRSTQKRTKSPVSA 60
           MVASPSSSMALVVPYTSITAQSGAPTGTPSRSRSRQPALTLAKRQPRRSTQKRTKSPVSA
Sbjct: 1   MVASPSSSMALVVPYTSITAQSGAPTGTPSRSRSRQPALTLAKRQPRRSTQKRTKSPVSA 60

Query: 61  QPSGSTAAHVGLCSSRSGHRKGGRLGTDTHAGSRRVKPTRRPPHQPLSSRSTRSATRSPR 120
           QPSGSTAAHVGLCSSRSGHRKGGRLGTDTHAGSRRVKPTRRPPHQPLSSRSTRSATRSPR
Sbjct: 61  QPSGSTAAHVGLCSSRSGHRKGGRLGTDTHAGSRRVKPTRRPPHQPLSSRSTRSATRSPR 120

Query: 121 RTGRWLNTMPSWNVVRLCAMQPRVSRRTCAPLASAWKRSASRGALASTYWPRSRAGHPSV 180
           RTGRWLNTMPSWNVVRLCAMQPRVSRRTCAPLASAWKRSASRGALASTYWPRSRAGHPSV
Sbjct: 121 RTGRWLNTMPSWNVVRLCAMQPRVSRRTCAPLASAWKRSASRGALASTYWPRSRAGHPSV 180


>gi|239747803 PREDICTED: hypothetical protein XP_002348320 [Homo
           sapiens]
          Length = 180

 Score =  364 bits (935), Expect = e-101
 Identities = 180/180 (100%), Positives = 180/180 (100%)

Query: 1   MVASPSSSMALVVPYTSITAQSGAPTGTPSRSRSRQPALTLAKRQPRRSTQKRTKSPVSA 60
           MVASPSSSMALVVPYTSITAQSGAPTGTPSRSRSRQPALTLAKRQPRRSTQKRTKSPVSA
Sbjct: 1   MVASPSSSMALVVPYTSITAQSGAPTGTPSRSRSRQPALTLAKRQPRRSTQKRTKSPVSA 60

Query: 61  QPSGSTAAHVGLCSSRSGHRKGGRLGTDTHAGSRRVKPTRRPPHQPLSSRSTRSATRSPR 120
           QPSGSTAAHVGLCSSRSGHRKGGRLGTDTHAGSRRVKPTRRPPHQPLSSRSTRSATRSPR
Sbjct: 61  QPSGSTAAHVGLCSSRSGHRKGGRLGTDTHAGSRRVKPTRRPPHQPLSSRSTRSATRSPR 120

Query: 121 RTGRWLNTMPSWNVVRLCAMQPRVSRRTCAPLASAWKRSASRGALASTYWPRSRAGHPSV 180
           RTGRWLNTMPSWNVVRLCAMQPRVSRRTCAPLASAWKRSASRGALASTYWPRSRAGHPSV
Sbjct: 121 RTGRWLNTMPSWNVVRLCAMQPRVSRRTCAPLASAWKRSASRGALASTYWPRSRAGHPSV 180


>gi|239741677 PREDICTED: hypothetical protein XP_002342280 [Homo
           sapiens]
          Length = 180

 Score =  364 bits (935), Expect = e-101
 Identities = 180/180 (100%), Positives = 180/180 (100%)

Query: 1   MVASPSSSMALVVPYTSITAQSGAPTGTPSRSRSRQPALTLAKRQPRRSTQKRTKSPVSA 60
           MVASPSSSMALVVPYTSITAQSGAPTGTPSRSRSRQPALTLAKRQPRRSTQKRTKSPVSA
Sbjct: 1   MVASPSSSMALVVPYTSITAQSGAPTGTPSRSRSRQPALTLAKRQPRRSTQKRTKSPVSA 60

Query: 61  QPSGSTAAHVGLCSSRSGHRKGGRLGTDTHAGSRRVKPTRRPPHQPLSSRSTRSATRSPR 120
           QPSGSTAAHVGLCSSRSGHRKGGRLGTDTHAGSRRVKPTRRPPHQPLSSRSTRSATRSPR
Sbjct: 61  QPSGSTAAHVGLCSSRSGHRKGGRLGTDTHAGSRRVKPTRRPPHQPLSSRSTRSATRSPR 120

Query: 121 RTGRWLNTMPSWNVVRLCAMQPRVSRRTCAPLASAWKRSASRGALASTYWPRSRAGHPSV 180
           RTGRWLNTMPSWNVVRLCAMQPRVSRRTCAPLASAWKRSASRGALASTYWPRSRAGHPSV
Sbjct: 121 RTGRWLNTMPSWNVVRLCAMQPRVSRRTCAPLASAWKRSASRGALASTYWPRSRAGHPSV 180


>gi|118572613 splicing coactivator subunit SRm300 [Homo sapiens]
          Length = 2752

 Score = 47.4 bits (111), Expect = 7e-06
 Identities = 46/192 (23%), Positives = 83/192 (43%), Gaps = 17/192 (8%)

Query: 1   MVASPSSSMALVVPYTSITAQSGAPTGTPSR-SRSRQPALTLAKRQPRRSTQKRTKSPVS 59
           +  +P S   +  P  +   +  +P  +P +  +S     +    QP + ++  + SP S
Sbjct: 381 LATTPLSQEPVNPPSEASPTRDRSPPKSPEKLPQSSSSESSPPSPQPTKVSRHASSSPES 440

Query: 60  AQPSGSTAAHVGLCSS-RSGHRKGGRLGTD---THAGSRRVKPTRRPPHQPLSSRSTRSA 115
            +P+ +  +H  + SS  S +R  GR   D   +H  SRR+  +R     P +++  RS 
Sbjct: 441 PKPAPAPGSHREISSSPTSKNRSHGRAKRDKSHSHTPSRRMGRSR----SPATAKRGRSR 496

Query: 116 TRSPRRTGRWLNTMPSWNVVRLC-----AMQPRVSRRTCAPLASAWKRSAS---RGALAS 167
           +R+P + G   +  P W   R       +  P+   R+ +P    W RS +   RG   S
Sbjct: 497 SRTPTKRGHSRSRSPQWRRSRSAQRWGRSRSPQRRGRSRSPQRPGWSRSRNTQRRGRSRS 556

Query: 168 TYWPRSRAGHPS 179
               RS +  P+
Sbjct: 557 ARRGRSHSRSPA 568



 Score = 42.0 bits (97), Expect = 3e-04
 Identities = 49/156 (31%), Positives = 72/156 (46%), Gaps = 17/156 (10%)

Query: 16  TSITAQSGAPTGTPSRSRSRQPAL--TLAKRQPRRSTQKRTKSPVSAQP-SGSTAAHVGL 72
           T    +S + T T  RSRSR PA       R P R  + RT+SPV  +  S S A   G 
Sbjct: 588 TPARRRSRSRTPTRRRSRSRTPARRGRSRSRTPAR-RRSRTRSPVRRRSRSRSPARRSGR 646

Query: 73  CSSRSGHRKGGRLGTDTHAGSRRVKPTRRPPHQPLSSRSTRSATRSPRRTGRWLNTMP-- 130
             SR+  R+G    + +   +RR +   R P    + RS RS +R+P R GR  +  P  
Sbjct: 647 SRSRTPARRG---RSRSRTPARRGRSRSRTP----ARRSGRSRSRTPARRGRSRSRTPRR 699

Query: 131 ----SWNVVRLCAMQPRVSRRTCAPLASAWKRSASR 162
               S ++VR      R  +R     +S+ +++ SR
Sbjct: 700 GRSRSRSLVRRGRSHSRTPQRRGRSGSSSERKNKSR 735



 Score = 41.2 bits (95), Expect = 5e-04
 Identities = 50/163 (30%), Positives = 71/163 (43%), Gaps = 25/163 (15%)

Query: 14   PYTSITAQSGAPTGTPSRSRSRQPALTLAKRQPRRS--TQKRTK---SPVSAQPSGSTAA 68
            P T   ++S  P  T  RSRSR P +T  + + R S  T++R++   SPV+ + S S  +
Sbjct: 1940 PTTRRRSRSRTPPVTRRRSRSRTPPVTRRRSRSRTSPITRRRSRSRTSPVTRRRSRSRTS 1999

Query: 69   HVGLCSSRSGHRKGGRLGTDTHAGSRRVKPTRRPPHQPLSSRS-------TRSATRSP-- 119
             V    SRS           T   +RR   +R PP     SRS        RS +RSP  
Sbjct: 2000 PVTRRRSRS----------RTSPVTRRRSRSRTPPAIRRRSRSRTPLLPRKRSRSRSPLA 2049

Query: 120  -RRTGRWLNTMPSWNVVRLCAMQPRVSRRTCAPLASAWKRSAS 161
             RR  R      +     L    P + RR+ +  +S   RSA+
Sbjct: 2050 IRRRSRSRTPRTARGKRSLTRSPPAIRRRSASGSSSDRSRSAT 2092



 Score = 38.5 bits (88), Expect = 0.003
 Identities = 46/152 (30%), Positives = 64/152 (42%), Gaps = 5/152 (3%)

Query: 29  PSRSRSRQPALTLAKRQPRRSTQKRTKSPVSAQPSGS-TAAHVGLCSSRSGHRKGGRLGT 87
           P  SRSR        R  RR  +  ++SP +   S S T A  G   SR+  R+  R  T
Sbjct: 540 PGWSRSRNTQRRGRSRSARRG-RSHSRSPATRGRSRSRTPARRGRSRSRTPARRRSRSRT 598

Query: 88  DTHAGSRRVKPTRRPPHQPLSSRSTRSATRSPRRTGRWLNTMPSWNVVRLCAMQPRVSRR 147
            T   SR   P RR   +  +    RS TRSP R  R  +  P+    R  +  P  +RR
Sbjct: 599 PTRRRSRSRTPARRGRSRSRTPARRRSRTRSPVRR-RSRSRSPARRSGRSRSRTP--ARR 655

Query: 148 TCAPLASAWKRSASRGALASTYWPRSRAGHPS 179
             +   +  +R  SR    +    RSR+  P+
Sbjct: 656 GRSRSRTPARRGRSRSRTPARRSGRSRSRTPA 687



 Score = 38.5 bits (88), Expect = 0.003
 Identities = 46/165 (27%), Positives = 69/165 (41%), Gaps = 12/165 (7%)

Query: 20  AQSGAPTGTPSRSRSRQPAL--TLAKRQPRRSTQKRTKSPV--SAQPSGSTAAHVGLCSS 75
           ++S +P     RSRSR PA       R P R  + R+++P   S +    T A  G   S
Sbjct: 635 SRSRSPARRSGRSRSRTPARRGRSRSRTPARRGRSRSRTPARRSGRSRSRTPARRGRSRS 694

Query: 76  RSGHRKGGRLGTDTHAG-SRRVKPTRRPPHQPLSSRSTRSATRSPRRTGRWLNTMPSWNV 134
           R+  R   R  +    G S    P RR      S R  +S T   R      N+ P    
Sbjct: 695 RTPRRGRSRSRSLVRRGRSHSRTPQRRGRSGSSSERKNKSRTSQRRSRS---NSSPEMKK 751

Query: 135 VRLCAMQPRVSRRTCAPLASAWKRSASRGALA-STYWPRSRAGHP 178
            R+ +   R SR   +P + A  R + R +L+ S+  P+ ++  P
Sbjct: 752 SRISS---RRSRSLSSPRSKAKSRLSLRRSLSGSSPCPKQKSQTP 793



 Score = 37.0 bits (84), Expect = 0.009
 Identities = 39/130 (30%), Positives = 56/130 (43%), Gaps = 10/130 (7%)

Query: 28   TPSRSRSRQ--PALTLAKRQPRRST------QKRTKSPVSAQPSGSTAAHVGLCSSRSGH 79
            TP R RS +  P LT   R  RRS       + R+++P   + S S ++      SRS  
Sbjct: 1684 TPPRRRSSRSSPELTRKARLSRRSRSASSSPETRSRTPPRHRRSPSVSSPEPAEKSRSSR 1743

Query: 80   RKGGRLGTDTHAGSRRVKPTRRPPH--QPLSSRSTRSATRSPRRTGRWLNTMPSWNVVRL 137
            R+       T   SRR +     P   Q   SRS R  TR+ RR  R  ++  +    + 
Sbjct: 1744 RRRSASSPRTKTTSRRGRSPSPKPRGLQRSRSRSRREKTRTTRRRDRSGSSQSTSRRRQR 1803

Query: 138  CAMQPRVSRR 147
               + RV+RR
Sbjct: 1804 SRSRSRVTRR 1813



 Score = 36.6 bits (83), Expect = 0.012
 Identities = 50/166 (30%), Positives = 66/166 (39%), Gaps = 14/166 (8%)

Query: 28  TPSR--SRSRQPALTLAKRQPRRSTQKR----TKSPV-----SAQPSGSTAAHVGLCSSR 76
           TPSR   RSR PA     R   R+  KR    ++SP      SAQ  G + +      SR
Sbjct: 476 TPSRRMGRSRSPATAKRGRSRSRTPTKRGHSRSRSPQWRRSRSAQRWGRSRSPQRRGRSR 535

Query: 77  SGHRKGGRLGTDTHAGSRRVKPTRRPPHQPLSSRSTRSATRSPRRTGRWLNTMPSWNVVR 136
           S  R G     +T    R     R   H    +   RS +R+P R GR  +  P+    R
Sbjct: 536 SPQRPGWSRSRNTQRRGRSRSARRGRSHSRSPATRGRSRSRTPARRGRSRSRTPARRRSR 595

Query: 137 LCAMQPRVSR-RTCAPLASAWKRSAS--RGALASTYWPRSRAGHPS 179
                 R SR RT A    +  R+ +  R    S    RSR+  P+
Sbjct: 596 SRTPTRRRSRSRTPARRGRSRSRTPARRRSRTRSPVRRRSRSRSPA 641



 Score = 36.6 bits (83), Expect = 0.012
 Identities = 48/156 (30%), Positives = 66/156 (42%), Gaps = 23/156 (14%)

Query: 20   AQSGAPTGTPSRSRSRQPALTLAKRQPRRSTQKRTKSPVSAQPSGSTAAHVGLCSSRSGH 79
            ++S A   T  RSRSR P ++      RR ++ RT SPVS + S S      +   RS  
Sbjct: 1864 SRSRASPATHRRSRSRTPLIS------RRRSRSRT-SPVSRRRSRS---RTSVTRRRSRS 1913

Query: 80   RKGGRLGTDTHAGSRRVKPTRRPPHQPLSSRSTRSATRSPRRTGRWLNTMPSWNVVRLCA 139
            R            SRR   +R P   P++ R +RS T + RR  R  +  P     R  +
Sbjct: 1914 R--------ASPVSRRRSRSRTP---PVTRRRSRSRTPTTRRRSR--SRTPPVTRRRSRS 1960

Query: 140  MQPRVSRRTCAPLASAWKRSASRGALASTYWPRSRA 175
              P V+RR      S   R  SR   +     RSR+
Sbjct: 1961 RTPPVTRRRSRSRTSPITRRRSRSRTSPVTRRRSRS 1996



 Score = 33.9 bits (76), Expect = 0.077
 Identities = 50/165 (30%), Positives = 72/165 (43%), Gaps = 40/165 (24%)

Query: 14   PYTSITAQSG-APTGTP---SRSRSRQPALTLAKRQPRRSTQKRTKSPVSAQPSGSTAAH 69
            P T  T++ G +P+  P    RSRSR      ++R+  R+T++R +S  S     ST+  
Sbjct: 1751 PRTKTTSRRGRSPSPKPRGLQRSRSR------SRREKTRTTRRRDRSGSSQ----STSRR 1800

Query: 70   VGLCSSRSGHRKGGRLGTDTHAGSRRVKPTRRPPHQPLSSRSTRSATRSPRRTGRWLNTM 129
                 SRS   +  R G+  H+ S               +R   S T S RR GR   T 
Sbjct: 1801 RQRSRSRSRVTRRRRGGSGYHSRS--------------PARQESSRTSSRRRRGR-SRTP 1845

Query: 130  PSWNVVRLCAMQPRVSRRTCAPLASAWKRSASRGALASTYWPRSR 174
            P+       + +   SR + AP    WKRS SR + A+    RSR
Sbjct: 1846 PT-------SRKRSRSRTSPAP----WKRSRSRASPATHRRSRSR 1879



 Score = 33.9 bits (76), Expect = 0.077
 Identities = 42/181 (23%), Positives = 67/181 (37%), Gaps = 11/181 (6%)

Query: 3    ASPSSSMALVVPYTSITAQSGAPTGTPSRSRS----RQPALTLAKRQPRRSTQKRTKSPV 58
            +S S S    +P     A    P+ TP+   +    R P  T AKR+ R S+   + S  
Sbjct: 2558 SSSSDSEGSSLPVQPEVALKRVPSPTPAPKEAVREGRPPEPTPAKRKRRSSSSSSSSSSS 2617

Query: 59   SAQPSGSTAAHVGLCSSRSGHRKGGRLGTDTHAGSRRVKPTRRPPHQPLSSRSTRSATRS 118
            S+  S S+++     SS S         + + + ++        P  P         +RS
Sbjct: 2618 SSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSPSPAKPGPQALPKPASPKKPPPGERRSRS 2677

Query: 119  PRRTGRWLNTMPSWNVVRLCAMQPRVSRRTCAPLASAWKRSASRGALASTYWPRSRAGHP 178
            PR+       + S    R  +  P V RR  +P  S   + +S     S    R  +  P
Sbjct: 2678 PRK------PIDSLRDSRSLSYSP-VERRRPSPQPSPRDQQSSSSERGSRRGQRGDSRSP 2730

Query: 179  S 179
            S
Sbjct: 2731 S 2731



 Score = 32.7 bits (73), Expect = 0.17
 Identities = 30/105 (28%), Positives = 41/105 (39%), Gaps = 13/105 (12%)

Query: 27   GTPSRSRSRQPALTLAKRQP---RRSTQKRTKSPVSAQPSGSTAAHVGLCSSRSGHRKGG 83
            G P  S   Q    LA  QP   RRS+   + S  S+  S S+++      S S   +G 
Sbjct: 2507 GEPPASTGAQQPSALAALQPAKERRSSSSSSSSSSSSSSSSSSSSSSSSSGSSSSDSEGS 2566

Query: 84   RLGTDTHAGSRRV-KPT---------RRPPHQPLSSRSTRSATRS 118
             L        +RV  PT          RPP    + R  RS++ S
Sbjct: 2567 SLPVQPEVALKRVPSPTPAPKEAVREGRPPEPTPAKRKRRSSSSS 2611



 Score = 32.0 bits (71), Expect = 0.29
 Identities = 37/151 (24%), Positives = 53/151 (35%), Gaps = 7/151 (4%)

Query: 24   APTGTPSRSRSRQPALTLAKRQPRRSTQKRTKSPVSAQPSGSTAAHVGLCSSRSGHRKGG 83
            AP        S +P     +  PRRS    +       P GS++       S   H    
Sbjct: 1611 APRAQSGSDSSPEPKAPAPRALPRRSRSGSSSKGRGPSPEGSSSTE-----SSPEHPPKS 1665

Query: 84   RLGTDTHAGSRRVKPTRRPPHQPLSSRSTRSATRSPRRTGRWLNTMPSWNVVRLCAMQPR 143
            R        S   K   R P +  SSRS+   TR  R + R  +   S         + R
Sbjct: 1666 RTARRGSRSSPEPKTKSRTPPRRRSSRSSPELTRKARLSRRSRSASSSPETRSRTPPRHR 1725

Query: 144  VSRRTCAPLASAWKRSASRGALASTYWPRSR 174
             S    +P  +   RS+ R   AS+  PR++
Sbjct: 1726 RSPSVSSPEPAEKSRSSRRRRSASS--PRTK 1754



 Score = 30.0 bits (66), Expect = 1.1
 Identities = 41/164 (25%), Positives = 64/164 (39%), Gaps = 22/164 (13%)

Query: 19  TAQSGAPTGTPSRSRSRQPALTLAKRQPRRSTQKR-------TKSPVSAQPSGSTAAHVG 71
           T +  + + +P   RSR        R P+R  + R       ++S  + +   S +A  G
Sbjct: 501 TKRGHSRSRSPQWRRSRSAQRWGRSRSPQRRGRSRSPQRPGWSRSRNTQRRGRSRSARRG 560

Query: 72  LCSSRSGHRKG-GRLGTDTHAGSRRVKPTRRPPHQPLSSRSTRSATRSPRRTGRWLNTMP 130
              SRS   +G  R  T    G  R +   R   +  +    RS +R+P R GR  +  P
Sbjct: 561 RSHSRSPATRGRSRSRTPARRGRSRSRTPARRRSRSRTPTRRRSRSRTPARRGRSRSRTP 620

Query: 131 SWNVVRLCAMQPRVSRRTCAPLASAWKRSASRGALASTYWPRSR 174
           +           R   RT +P+    +RS SR     +   RSR
Sbjct: 621 A-----------RRRSRTRSPVR---RRSRSRSPARRSGRSRSR 650


>gi|88758580 cyclin L2 isoform A [Homo sapiens]
          Length = 520

 Score = 43.5 bits (101), Expect = 1e-04
 Identities = 35/106 (33%), Positives = 51/106 (48%), Gaps = 7/106 (6%)

Query: 22  SGAPTGTPSRSRSRQPALTLAKRQPRRSTQKRTKSPVSAQPSGSTAAHVGLCSSRSGHRK 81
           +G P G  SRSRSR    + ++   R ++ KR KS   +   GS +       S S  R+
Sbjct: 372 NGLPKGRESRSRSRSREQSYSRSPSRSASPKRRKSDSGSTSGGSKSQSRSRSRSDSPPRQ 431

Query: 82  GGR----LGTDTHAGSRRVKPTRRP--PHQPLSSRSTRSATRSPRR 121
             R     G++   GSR+ K  + P  PH+  S  S+RS +RS  R
Sbjct: 432 APRSAPYKGSEIR-GSRKSKDCKYPQKPHKSRSRSSSRSRSRSRER 476


>gi|239752594 PREDICTED: hypothetical protein, partial [Homo
           sapiens]
          Length = 673

 Score = 38.9 bits (89), Expect = 0.002
 Identities = 48/168 (28%), Positives = 65/168 (38%), Gaps = 29/168 (17%)

Query: 5   PSSSMALVVPYTSITAQ--SGAPTGTPSR-SRSRQPALTLAKRQPRRSTQKRTKSPVSAQ 61
           P +S   ++  TSIT    + +PT TP R S +  P        P R++   T+S  S  
Sbjct: 408 PRASPTGMLSRTSITKMDSTASPTRTPPRASPTGTPPRASPTGTPSRASPTGTQSTASPT 467

Query: 62  PSGSTAAHVGLCSSRSGHRKGGRLGTDTHAGSRRVKPTRRPPHQPLSS-RSTRSATRSPR 120
            S STA+  G  S+ S                 R   TR P    L+   ST S TR+P 
Sbjct: 468 GSPSTASPTGSPSTAS-----------PTGSPSRASLTRTPSRASLTKMESTASITRTPS 516

Query: 121 RTGRWLNTMPSWNVVRLCAMQPRVSRRTCAPLASAWKRSASRGALAST 168
           R        P+W         P  +  T +P  +    S SR AL  T
Sbjct: 517 RAS------PTWT--------PSTASPTGSPSTALAMGSPSRAALTRT 550



 Score = 33.9 bits (76), Expect = 0.077
 Identities = 47/149 (31%), Positives = 60/149 (40%), Gaps = 32/149 (21%)

Query: 4   SPSSSMALVVPYTSITAQS---GAPTGTPSR----------SRSRQPALTLAKRQPRR-- 48
           +PS +   + P T+   +     +PTG  SR          S SR P      R P R  
Sbjct: 289 TPSRASLSMTPSTASLMRMLPRASPTGMLSRTSLTKMDSTASISRTPPRASITRTPSRAS 348

Query: 49  -----STQKRTKSPVSAQPSGS--TAAHVGLCSSRS---GHRKGGRLGTDTHAGSRRVKP 98
                ST   T +P  A P+GS  TA+  GL S+ S      +    GT + A   R KP
Sbjct: 349 PTGKPSTASPTGTPSRASPTGSPSTASLTGLSSTASPTGTPPRASPTGTPSTASLTR-KP 407

Query: 99  TRRPPHQPLSSR------STRSATRSPRR 121
            R  P   LS        ST S TR+P R
Sbjct: 408 PRASPTGMLSRTSITKMDSTASPTRTPPR 436



 Score = 33.5 bits (75), Expect = 0.10
 Identities = 59/193 (30%), Positives = 74/193 (38%), Gaps = 39/193 (20%)

Query: 22  SGAPTGTPSR-SRSRQPA-LTLAKRQPRRS---------------------TQKR---TK 55
           + +PTGTPSR S S  P+  +L +  PR S                     T  R   T+
Sbjct: 283 TASPTGTPSRASLSMTPSTASLMRMLPRASPTGMLSRTSLTKMDSTASISRTPPRASITR 342

Query: 56  SPVSAQPSG--STAAHVGLCSSRSGHRKGGRLGTDTHAG-SRRVKPTRRPPH-QPLSSRS 111
           +P  A P+G  STA+  G  S  S     G   T +  G S    PT  PP   P  + S
Sbjct: 343 TPSRASPTGKPSTASPTGTPSRAS---PTGSPSTASLTGLSSTASPTGTPPRASPTGTPS 399

Query: 112 TRSATRSPRR---TGRWLNTMPSW--NVVRLCAMQPRVSRRTCAPLASAWKRSASRGALA 166
           T S TR P R   TG    T  +   +        PR S     P AS    + SR +  
Sbjct: 400 TASLTRKPPRASPTGMLSRTSITKMDSTASPTRTPPRASPTGTPPRASP-TGTPSRASPT 458

Query: 167 STYWPRSRAGHPS 179
            T    S  G PS
Sbjct: 459 GTQSTASPTGSPS 471



 Score = 31.6 bits (70), Expect = 0.38
 Identities = 32/107 (29%), Positives = 43/107 (40%), Gaps = 24/107 (22%)

Query: 29  PSRSRSRQPALTLAKRQPRRSTQKRTKSPVSAQPSGSTAAHVGLCSSRSGHRKGGRLGTD 88
           P  S  R+P+     R P R++   T S  S   + STAA + + S              
Sbjct: 108 PRASLMRRPSTASLTRSPSRASLTTTPSRASLSMTPSTAAALTMPS-------------- 153

Query: 89  THAGSRRVKPTRRPPHQPLS-SRSTRSATRSPRR---TGRWLNTMPS 131
                 R   TR PP   L+ + ST S TR+P R   TG    T P+
Sbjct: 154 ------RASLTRTPPRASLTMTPSTASLTRTPPRASPTGMPSRTSPT 194



 Score = 28.5 bits (62), Expect = 3.3
 Identities = 35/128 (27%), Positives = 50/128 (39%), Gaps = 18/128 (14%)

Query: 4   SPSSSMALVVPYTSITAQSGAPTGTPSRSRSRQPALTLAKRQPRRSTQKRTKS------- 56
           SPS+++A+  P         A T TPSR+   +     +   P R++  RT S       
Sbjct: 532 SPSTALAMGSP------SRAALTRTPSRASLTRTPSRASLTTPSRASLTRTPSTVLLTRM 585

Query: 57  PVSAQPSG--STAAHVGLCSSRSGHRKGGRLGTDTHAGSRRVKPTRRPPH-QPLSSRSTR 113
           P SA P+G  S  +  G+ SS    +              R  PT  PP   P  +    
Sbjct: 586 PPSASPTGMPSRTSPTGMPSSALLTKMDST--ASITRTPPRASPTETPPRASPTGTPPRA 643

Query: 114 SATRSPRR 121
           S T +P R
Sbjct: 644 SPTGTPPR 651


>gi|42821110 hypothetical protein LOC340602 [Homo sapiens]
          Length = 503

 Score = 38.9 bits (89), Expect = 0.002
 Identities = 42/161 (26%), Positives = 65/161 (40%), Gaps = 8/161 (4%)

Query: 20  AQSGAPTGTPSRSRSRQPALTLAKR----QPRRSTQKRTKSPVSAQPSGSTAAHVGLCSS 75
           A+ G  +   S  R R  A   A+R     P  + + RT    +   S ST    GL  S
Sbjct: 289 ARRGRDSAPVSAPRGRDSAPGSARRGRDSAPGPALRVRTARSDAGHRSTSTTPGTGL-RS 347

Query: 76  RSGHRKGGRLGTDTHAGSRRVKPTRRPPHQPLSSRSTRSATRSPRRTGRWLNTMPSWNVV 135
           RS  ++   L   + +GS    P+     + L+ +S RS +  P    R   + P W+ V
Sbjct: 348 RSTQQRSALLSRRSLSGSADENPSCGTGSERLAFQS-RSGSPDPEVPSR--ASPPVWHAV 404

Query: 136 RLCAMQPRVSRRTCAPLASAWKRSASRGALASTYWPRSRAG 176
           R+ A  P    R   P+   W  S+S    +++  P    G
Sbjct: 405 RMRASSPSPPGRFFLPIPQQWDESSSSSYASNSSSPSRSPG 445


>gi|16905517 FUS interacting protein (serine-arginine rich) 1
           isoform 2 [Homo sapiens]
          Length = 262

 Score = 38.5 bits (88), Expect = 0.003
 Identities = 34/126 (26%), Positives = 55/126 (43%), Gaps = 17/126 (13%)

Query: 17  SITAQSGAPTGTPSRSRS---------RQPALTLAKRQPRRSTQKRTKSPVSAQPSGSTA 67
           S + ++  PTG P RSRS         R  + + +K   R  ++ + K  + A+    +A
Sbjct: 141 SYSPRNSRPTGRPRRSRSHSDNDRFKHRNRSFSRSKSNSRSRSKSQPKKEMKAKSRSRSA 200

Query: 68  AHVGLCSSRSGHRKGGRLGTDTHAGSRRVKPTRR--PPHQPLSSRSTRSATRSPRRTGRW 125
           +H     +     K     T   +GSR  K +R+  PP     SRS +S +RS  R+  W
Sbjct: 201 SHTKTRGTSKTDSK-----THYKSGSRYEKESRKKEPPRSKSQSRS-QSRSRSKSRSRSW 254

Query: 126 LNTMPS 131
            +   S
Sbjct: 255 TSPKSS 260


>gi|239755146 PREDICTED: hypothetical protein [Homo sapiens]
          Length = 115

 Score = 37.7 bits (86), Expect = 0.005
 Identities = 34/122 (27%), Positives = 47/122 (38%), Gaps = 24/122 (19%)

Query: 48  RSTQKRTKSPVSAQPSGSTAAHVGLCSSRSGHRKGGRLGTDTHAGSRRVKPTRRPPHQPL 107
           RS Q R K   + + +     H      RSG R   R G        +   T  PP++  
Sbjct: 2   RSHQARLKKTAACESAPCVRLH------RSGRRLSARAG--------QPGATEPPPYRDR 47

Query: 108 SSRSTRSATRSPRRTGRWLNT---------MPSWNVVRLCAMQPRVSRRTCAPLASAWKR 158
            S S   A  +PRR+GRW +             W    L    PRV+    +P A+AW  
Sbjct: 48  RSHSP-PALSAPRRSGRWPSLGGLRERGRRRLDWRASGLRERSPRVTLGEASPRAAAWSP 106

Query: 159 SA 160
           S+
Sbjct: 107 SS 108


>gi|239741486 PREDICTED: hypothetical protein XP_002342213 [Homo
           sapiens]
          Length = 233

 Score = 37.7 bits (86), Expect = 0.005
 Identities = 37/121 (30%), Positives = 52/121 (42%), Gaps = 12/121 (9%)

Query: 3   ASPSSSMALVVPYTSITAQSGAPTGTPSRSRSR-QPALTLAKRQPRRSTQKRTKSPVSAQ 61
           AS +S +AL+ P          P  +PS+SR+     L    R  ++       SP++  
Sbjct: 75  ASLTSPLALIPP--------SEPQHSPSKSRALCNRGLRSTSRCTQQGLPSVPPSPLTPL 126

Query: 62  PSGSTAAHVGLCSSRSGHRKGGRLGTDTHAGSRRVKPTRRPPHQPLSS--RSTRSATRSP 119
           P   TA       S  G R G  LGT     + RV P++ PP +   S  RST  A  SP
Sbjct: 127 PPSPTAPRRSQYPS-PGSRVGRGLGTGRGKLAHRVAPSKEPPERACGSRGRSTGWAASSP 185

Query: 120 R 120
           +
Sbjct: 186 K 186


>gi|72534660 splicing factor, arginine/serine-rich 7 [Homo sapiens]
          Length = 238

 Score = 37.7 bits (86), Expect = 0.005
 Identities = 33/104 (31%), Positives = 45/104 (43%), Gaps = 11/104 (10%)

Query: 30  SRSRSRQPALTLAKRQPRRSTQKRTKSPVSAQPSGSTAAHV------GLCSSRSGHRKGG 83
           SRSRSR  + +  +R  R  ++ R +   SA P  S +  +       L  SRSG  KG 
Sbjct: 128 SRSRSRSHSRSRGRRYSRSRSRSRGRRSRSASPRRSRSISLRRSRSASLRRSRSGSIKGS 187

Query: 84  RLGTDTHAGSRRVKPTRRPPHQPLSSRS-----TRSATRSPRRT 122
           R          R +   RP      SRS     +RS + SPRR+
Sbjct: 188 RYFQSPSRSRSRSRSISRPRSSRSKSRSPSPKRSRSPSGSPRRS 231


>gi|88501738 TRIO and F-actin binding protein isoform 6 [Homo
           sapiens]
          Length = 2365

 Score = 37.7 bits (86), Expect = 0.005
 Identities = 39/134 (29%), Positives = 47/134 (35%), Gaps = 14/134 (10%)

Query: 3   ASPSSSMALVVPYTSITAQSGA----PTGTPSRSRSRQPALTL---AKRQPRRSTQKRTK 55
           +SPS S  L  P TS T Q       PT TP R   R P +         P R+TQ+   
Sbjct: 343 SSPSRSTQLDNPRTSSTQQDNPQTSFPTCTPQRENPRTPCVQQDDPRASSPNRTTQRENS 402

Query: 56  SPVSAQPSGSTAAHVGLCSSRSGHRKGGRLGTDTHAGSRRVKPTRRPPHQPLSSRSTR-- 113
               AQ     A+     S     R   R         R   P+R     P +S + R  
Sbjct: 403 RTSCAQRDNPKASRTS--SPNRATRDNPRTSCAQRDNPRASSPSRATRDNPTTSCAQRDN 460

Query: 114 ---SATRSPRRTGR 124
              S T SP R  R
Sbjct: 461 PRASRTSSPNRATR 474


>gi|239749627 PREDICTED: hypothetical protein XP_002347107 [Homo
           sapiens]
          Length = 115

 Score = 37.0 bits (84), Expect = 0.009
 Identities = 34/122 (27%), Positives = 46/122 (37%), Gaps = 24/122 (19%)

Query: 48  RSTQKRTKSPVSAQPSGSTAAHVGLCSSRSGHRKGGRLGTDTHAGSRRVKPTRRPPHQPL 107
           RS Q R K   + + +     H      RSG R   R G        +   T  PP++  
Sbjct: 2   RSHQARLKKTAACESAPCVRLH------RSGRRLSARAG--------QPGATEPPPYRDR 47

Query: 108 SSRSTRSATRSPRRTGRWLNT---------MPSWNVVRLCAMQPRVSRRTCAPLASAWKR 158
            S S   A  +PRR+GRW +             W    L    PRV+     P A+AW  
Sbjct: 48  RSHSP-PALSAPRRSGRWPSLGGLRERGRRRLDWRASGLRERSPRVTLGEAPPRAAAWSP 106

Query: 159 SA 160
           S+
Sbjct: 107 SS 108


>gi|239743902 PREDICTED: hypothetical protein XP_002342970 [Homo
           sapiens]
          Length = 115

 Score = 37.0 bits (84), Expect = 0.009
 Identities = 34/122 (27%), Positives = 46/122 (37%), Gaps = 24/122 (19%)

Query: 48  RSTQKRTKSPVSAQPSGSTAAHVGLCSSRSGHRKGGRLGTDTHAGSRRVKPTRRPPHQPL 107
           RS Q R K   + + +     H      RSG R   R G        +   T  PP++  
Sbjct: 2   RSHQARLKKTAACESAPCVRLH------RSGRRLSARAG--------QPGATEPPPYRDR 47

Query: 108 SSRSTRSATRSPRRTGRWLNT---------MPSWNVVRLCAMQPRVSRRTCAPLASAWKR 158
            S S   A  +PRR+GRW +             W    L    PRV+     P A+AW  
Sbjct: 48  RSHSP-PALSAPRRSGRWPSLGGLRERGRRRLDWRASGLRERSPRVTLGEAPPRAAAWSP 106

Query: 159 SA 160
           S+
Sbjct: 107 SS 108


>gi|239753698 PREDICTED: hypothetical protein [Homo sapiens]
          Length = 416

 Score = 36.2 bits (82), Expect = 0.016
 Identities = 35/123 (28%), Positives = 49/123 (39%), Gaps = 2/123 (1%)

Query: 3   ASPSSSMALVVPYTSITAQSGAPTGTPSRSRSRQPALTLAKRQPRRSTQKRTKSPVSAQP 62
           A P S++   +P  S+    GA    P  +  R+ AL  A  +  ++ Q + +SP SA+ 
Sbjct: 99  APPGSAIPAHLP-RSVQRVLGARRTEPRSAGERRRALPAAAGRKTKTWQSQNQSPRSARA 157

Query: 63  SGSTAAHVGLCSSRSGHRKGGRLG-TDTHAGSRRVKPTRRPPHQPLSSRSTRSATRSPRR 121
             +  A  G      G R    LG       SR   P R P      SR   SA    +R
Sbjct: 158 PHTAGAGPGPGPEPRGRRSHSPLGFFSPSVPSRSPLPEREPERTDDRSRVESSARAGDQR 217

Query: 122 TGR 124
            GR
Sbjct: 218 RGR 220


>gi|239748278 PREDICTED: hypothetical protein [Homo sapiens]
          Length = 416

 Score = 36.2 bits (82), Expect = 0.016
 Identities = 35/123 (28%), Positives = 49/123 (39%), Gaps = 2/123 (1%)

Query: 3   ASPSSSMALVVPYTSITAQSGAPTGTPSRSRSRQPALTLAKRQPRRSTQKRTKSPVSAQP 62
           A P S++   +P  S+    GA    P  +  R+ AL  A  +  ++ Q + +SP SA+ 
Sbjct: 99  APPGSAIPAHLP-RSVQRVLGARRTEPRSAGERRRALPAAAGRKTKTWQSQNQSPRSARA 157

Query: 63  SGSTAAHVGLCSSRSGHRKGGRLG-TDTHAGSRRVKPTRRPPHQPLSSRSTRSATRSPRR 121
             +  A  G      G R    LG       SR   P R P      SR   SA    +R
Sbjct: 158 PHTAGAGPGPGPEPRGRRSHSPLGFFSPSVPSRSPLPEREPERTDDRSRVESSARAGDQR 217

Query: 122 TGR 124
            GR
Sbjct: 218 RGR 220


>gi|9558733 transformer-2 alpha [Homo sapiens]
          Length = 282

 Score = 36.2 bits (82), Expect = 0.016
 Identities = 26/102 (25%), Positives = 49/102 (48%), Gaps = 7/102 (6%)

Query: 20  AQSGAPTGTPSRSRSRQPALTLAKRQPRRSTQKRTKSPVSAQPSGSTAAHVGLCSSRS-- 77
           +QS +PTGTP+R +S   + + +  +  + ++  ++S   ++      +H     SRS  
Sbjct: 16  SQSKSPTGTPARVKSESRSGSRSPSRVSKHSESHSRSRSKSRSRSRRHSHRRYTRSRSHS 75

Query: 78  -GHRKGGRLGTDTHAGSRRVKPTRRPPHQPLSSRSTRSATRS 118
             HR+  R  + T    RR    R   H P+S+R   + +R+
Sbjct: 76  HSHRRRSRSRSYTPEYRRR----RSRSHSPMSNRRRHTGSRA 113


>gi|42741684 zinc finger protein 265 isoform 1 [Homo sapiens]
          Length = 330

 Score = 35.8 bits (81), Expect = 0.020
 Identities = 28/106 (26%), Positives = 53/106 (50%), Gaps = 6/106 (5%)

Query: 19  TAQSGAPTGTPSRSRSRQPALTLAKRQPRRSTQKRTKSPVSAQPSGSTAAHVGLCSSRSG 78
           +++S +P+ + SRSRSR  + + ++ + R S+++R++S  S   S S+ +H G  S R  
Sbjct: 214 SSRSSSPSSSRSRSRSRSRSSSSSQSRSRSSSRERSRSRGSKSRS-SSRSHRGSSSPRK- 271

Query: 79  HRKGGRLGTDTHAGSRRVKPTRRPPHQPLSSRSTRSATRSPRRTGR 124
                   + + +  R  K +R         +  R+ +RSP R  R
Sbjct: 272 ----RSYSSSSSSPERNRKRSRSRSSSSGDRKKRRTRSRSPERRHR 313



 Score = 28.1 bits (61), Expect = 4.3
 Identities = 27/103 (26%), Positives = 47/103 (45%), Gaps = 10/103 (9%)

Query: 20  AQSGAPTGTPSRSRSRQPALTLAKRQPRRSTQKRTKSPVSAQPSGSTAAHVGLCSSRSGH 79
           ++S + + +PS SRSR      ++ + R S+  +++S  S++    +       SSRS H
Sbjct: 211 SRSSSRSSSPSSSRSR------SRSRSRSSSSSQSRSRSSSRERSRSRGSKSRSSSRS-H 263

Query: 80  RKGGRLGTDTHAGSRRVKPTRRPPHQPLSSRSTRSATRSPRRT 122
           R        +++ S       R   +   SRS+ S  R  RRT
Sbjct: 264 RGSSSPRKRSYSSSSSSPERNRKRSR---SRSSSSGDRKKRRT 303



 Score = 27.7 bits (60), Expect = 5.6
 Identities = 20/65 (30%), Positives = 31/65 (47%), Gaps = 8/65 (12%)

Query: 17  SITAQSGAPTGTPSRSRSRQPALTLAKRQPRRSTQKRTKSPVSAQPSGSTAAHVGLCSSR 76
           S ++ S +P     RSRSR      +    R+  + R++SP     S S ++H G   SR
Sbjct: 273 SYSSSSSSPERNRKRSRSRS-----SSSGDRKKRRTRSRSPERRHRSSSGSSHSG---SR 324

Query: 77  SGHRK 81
           S  +K
Sbjct: 325 SSSKK 329


>gi|195539372 ADAM metallopeptidase with thrombospondin type 1
          motif, 5 preproprotein [Homo sapiens]
          Length = 930

 Score = 35.8 bits (81), Expect = 0.020
 Identities = 23/76 (30%), Positives = 34/76 (44%), Gaps = 5/76 (6%)

Query: 25 PTGTPSRSRSRQPALTLAKRQPRR----STQKRTKSPVSAQPSGSTAAHVGLCSSRSG-H 79
          P  TP++ ++ QP    A  QPRR      Q+R + P    P        GL  +    +
Sbjct: 22 PAATPAQDKAGQPPTAAAAAQPRRRQGEEVQERAEPPGHPHPLAQRRRSKGLVQNIDQLY 81

Query: 80 RKGGRLGTDTHAGSRR 95
            GG++G   +AG RR
Sbjct: 82 SGGGKVGYLVYAGGRR 97


>gi|20127499 arginine/serine-rich splicing factor 6 [Homo sapiens]
          Length = 344

 Score = 35.4 bits (80), Expect = 0.027
 Identities = 34/114 (29%), Positives = 56/114 (49%), Gaps = 20/114 (17%)

Query: 19  TAQSGAPTGTPSRSRSRQPALTLAKRQPRRSTQKRTKSPVSAQPSGSTAAHVGLCSSRSG 78
           T+   + +G+ SRSRSR+     ++ + RRS++ R++S +S   S S +   G   SRS 
Sbjct: 185 TSHRRSYSGSRSRSRSRR----RSRSRSRRSSRSRSRS-ISKSRSRSRSRSKGRSRSRSK 239

Query: 79  HRKGGRLGTDTHAGSRRVKPTRRPPHQPLSSRS--------TRSATRSPRRTGR 124
            RK       + + S+    + R  H    SRS        +RS +RSP+  G+
Sbjct: 240 GRK-------SRSKSKSKPKSDRGSHSHSRSRSKDEYEKSRSRSRSRSPKENGK 286



 Score = 31.2 bits (69), Expect = 0.50
 Identities = 34/151 (22%), Positives = 57/151 (37%), Gaps = 19/151 (12%)

Query: 17  SITAQSGAPTGTPSRSRSRQPALTLAKRQPRRSTQKRTKSPVSAQPSGSTAAHVGLCSSR 76
           S  ++S + + + SRSRSR    + ++ + R+S  K    P                S R
Sbjct: 211 SSRSRSRSISKSRSRSRSRSKGRSRSRSKGRKSRSKSKSKPK---------------SDR 255

Query: 77  SGHRKGGRLGTDTHAGSRRVKPTRRPPHQPLSSRSTRSATRSPRRTGRWLNTMPSWNVVR 136
             H        D +  SR    +R P         ++S +RS  R+   L   PS    +
Sbjct: 256 GSHSHSRSRSKDEYEKSRSRSRSRSPKENGKGDIKSKSRSRSQSRSNSPLPVPPS----K 311

Query: 137 LCAMQPRVSRRTCAPLASAWKRSASRGALAS 167
             ++ P   R T    + +  +S SR   +S
Sbjct: 312 ARSVSPPPKRATSRSRSRSRSKSRSRSRSSS 342


>gi|33667117 MICAL-like 2 isoform 1 [Homo sapiens]
          Length = 904

 Score = 35.4 bits (80), Expect = 0.027
 Identities = 32/110 (29%), Positives = 46/110 (41%), Gaps = 13/110 (11%)

Query: 22  SGAPTGTPSRSRSRQPALTLAKRQPRRSTQKRTKSPVSA----------QPSGSTAAHVG 71
           S  P GT    R   P+L L+K   +   +   K  +SA          +PS +TAA V 
Sbjct: 424 SAVPPGTSLSGRGPTPSLVLSKDSSKEQARNFLKQALSALEEAGAPAPGRPSPATAA-VP 482

Query: 72  LCSSRSGHRKGGRLGTDTHAGSRRV--KPTRRPPHQPLSSRSTRSATRSP 119
               ++   +   L     + S RV   P+R  P  PLS+ ST  A+  P
Sbjct: 483 SSQPKTEAPQASPLAKPLQSSSPRVLGLPSRMEPPAPLSTSSTSQASALP 532


>gi|5802982 proline-rich nuclear receptor coactivator 1 [Homo
           sapiens]
          Length = 327

 Score = 35.0 bits (79), Expect = 0.035
 Identities = 27/100 (27%), Positives = 41/100 (41%), Gaps = 7/100 (7%)

Query: 18  ITAQSGAPTGTPSRSRSRQPALTLAKRQPRRSTQKRTKSPVSAQPSGSTAAHVGLCSSRS 77
           +T Q  AP   P+RS      L +A   PR + +KR K  V A P+G   +         
Sbjct: 68  LTPQPRAPAALPNRS------LAVAGGTPRAAPKKRRKKKVRASPAGQLPSRFHQYQQHR 121

Query: 78  GHRKGGRLGTDTHAGSRRVK-PTRRPPHQPLSSRSTRSAT 116
              +GGR      +G++ V  P       P ++  T  A+
Sbjct: 122 PSLEGGRSPATGPSGAQEVPGPAAALAPSPAAAAGTEGAS 161


>gi|122937227 U2-associated SR140 protein [Homo sapiens]
          Length = 1029

 Score = 35.0 bits (79), Expect = 0.035
 Identities = 30/99 (30%), Positives = 47/99 (47%), Gaps = 11/99 (11%)

Query: 28   TPSRSRSRQPALTLAKRQPRRSTQKRTKSPV--SAQPSGSTAAHVGLCSSRSGHRKGGRL 85
            TP+R + R+   + +    R S+ +R KSP   S +   S  +H     SRS H+   R 
Sbjct: 919  TPTR-KERKRRHSTSPSPSRSSSGRRVKSPSPKSERSERSERSHKESSRSRSSHKDSPR- 976

Query: 86   GTDTHAGSRRVKPTRRPPHQPLSSRSTRSATRSPRRTGR 124
              D    ++R     R P      RS RS +RSP+++G+
Sbjct: 977  --DVSKKAKRSPSGSRTP-----KRSRRSRSRSPKKSGK 1008


>gi|42741682 zinc finger protein 265 isoform 2 [Homo sapiens]
          Length = 320

 Score = 34.7 bits (78), Expect = 0.045
 Identities = 30/104 (28%), Positives = 53/104 (50%), Gaps = 14/104 (13%)

Query: 19  TAQSGAPTGTPSRSRSRQPALTLAKRQPRRSTQKRTKSPVSAQPSGSTAAHVGLCSSRSG 78
           +++S +P+ + SRSRSR  + + ++ + R S+++R++S  S   S S+ +H G  S R  
Sbjct: 214 SSRSSSPSSSRSRSRSRSRSSSSSQSRSRSSSRERSRSRGSKSRS-SSRSHRGSSSPRK- 271

Query: 79  HRKGGRLGTDTHAGSRRVKPTRRPPHQPLSSRSTRSATRSPRRT 122
                   + + +  R  K +R        SRS+ S  R  RRT
Sbjct: 272 ----RSYSSSSSSPERNRKRSR--------SRSSSSGDRKKRRT 303


>gi|32140760 collagen, type XXVII, alpha 1 [Homo sapiens]
          Length = 1860

 Score = 34.3 bits (77), Expect = 0.059
 Identities = 31/121 (25%), Positives = 50/121 (41%), Gaps = 11/121 (9%)

Query: 3   ASPSSSMALVVPYTSITAQSGAPTGTPSRSRSRQPALTLAKRQPRRSTQK---RTKSPVS 59
           + P+S+          TA S +P  TP  +RS +P  T+       ST +      +P S
Sbjct: 469 SKPASARTSTHKPPPFTALSSSPAPTPGSTRSTRPPATMVPPTSGTSTPRTAPAVPTPGS 528

Query: 60  AQPSGSTAAHVGLCSSRSGHRKGGRLGTDTHAGSRRVKPTRRPPHQPLSSRSTRSATRSP 119
           A P+GS        S ++G +   R           ++P +     PLS  +TR + R P
Sbjct: 529 A-PTGSKKPIGSEASKKAGPKSSPRKPVP-------LRPGKAARDVPLSDLTTRPSPRQP 580

Query: 120 R 120
           +
Sbjct: 581 Q 581


>gi|21361282 splicing factor, arginine/serine-rich 4 [Homo sapiens]
          Length = 494

 Score = 33.9 bits (76), Expect = 0.077
 Identities = 34/121 (28%), Positives = 48/121 (39%), Gaps = 28/121 (23%)

Query: 30  SRSRSRQPALTLAKRQPRR-----STQKRTKSPVSAQPSGSTAAHVGL--------CSSR 76
           SRSRSR  +    KR  +R     S++K+ K       S S +  V           S R
Sbjct: 366 SRSRSRSKSERSRKRGSKRDSKAGSSKKKKKEDTDRSQSRSPSRSVSKEREHAKSESSQR 425

Query: 77  SGHRKGGRLGTDTHAGSRRVKPTRRPPHQPLSSRS---------------TRSATRSPRR 121
            G  +    GT+    SR    ++  P+ P  SRS               +RSA+RSP R
Sbjct: 426 EGRGESENAGTNQETRSRSRSNSKSKPNLPSESRSRSKSASKTRSRSKSRSRSASRSPSR 485

Query: 122 T 122
           +
Sbjct: 486 S 486



 Score = 33.1 bits (74), Expect = 0.13
 Identities = 27/103 (26%), Positives = 47/103 (45%), Gaps = 8/103 (7%)

Query: 22  SGAPTGTPSRSRSRQPALTLAKRQPRRSTQKRTKSPVSAQP----SGSTAAHVGLCSSRS 77
           S   + + SRSRSR  + + +K + R  ++ R+K   S  P    S S +   G   S+S
Sbjct: 210 SSKSSHSKSRSRSRSGSRSRSKSRSRSQSRSRSKKEKSRSPSKEKSRSRSHSAGKSRSKS 269

Query: 78  GHRKGGRLGTDTHAGSRRVKPTRRPPHQPLSSRSTRSATRSPR 120
             +   ++  + + G    KP  R P +  S   +RS ++  R
Sbjct: 270 KDQAEEKIQNNDNVG----KPKSRSPSRHKSKSKSRSRSQERR 308



 Score = 31.6 bits (70), Expect = 0.38
 Identities = 30/115 (26%), Positives = 52/115 (45%), Gaps = 16/115 (13%)

Query: 20  AQSGAPTGTPSRSRS-----------RQPALTLAKRQPRRSTQKRTKSPVSAQPSGSTAA 68
           ++SG+ + + SRSRS           R P+   ++ +   + + R+KS   A+       
Sbjct: 222 SRSGSRSRSKSRSRSQSRSRSKKEKSRSPSKEKSRSRSHSAGKSRSKSKDQAEEKIQNND 281

Query: 69  HVGLCSSRSGHRKGGRLGTDTHAGSRRVKPTRRPP-----HQPLSSRSTRSATRS 118
           +VG   SRS  R   +  + + +  RRV+  +R        Q  S R +RS +RS
Sbjct: 282 NVGKPKSRSPSRHKSKSKSRSRSQERRVEEEKRGSVSRGRSQEKSLRQSRSRSRS 336



 Score = 29.6 bits (65), Expect = 1.5
 Identities = 24/94 (25%), Positives = 41/94 (43%), Gaps = 5/94 (5%)

Query: 25  PTGTPSRSRSRQPALTLAKRQPRRSTQKRTKSPVSAQPSGSTAAHVGLCSSRSGHRKGGR 84
           P     RS SR  + + ++ + R S + R++S  S      + +      SRSG R   +
Sbjct: 177 PGSRRRRSYSRSRSHSRSRSRSRHSRKSRSRSGSSKSSHSKSRSR-----SRSGSRSRSK 231

Query: 85  LGTDTHAGSRRVKPTRRPPHQPLSSRSTRSATRS 118
             + + + SR  K   R P +  S   + SA +S
Sbjct: 232 SRSRSQSRSRSKKEKSRSPSKEKSRSRSHSAGKS 265



 Score = 28.1 bits (61), Expect = 4.3
 Identities = 40/164 (24%), Positives = 61/164 (37%), Gaps = 15/164 (9%)

Query: 20  AQSGAPTGTPSRSRSRQPALTLAKRQPRRSTQKRTKSPVSAQPSGSTAAHVGLCSSRSGH 79
           ++S +  G+ SRSRSR  +    K + R   + R++S   ++   S        S     
Sbjct: 332 SRSRSKGGSRSRSRSRSKSKDKRKGRKRSREESRSRSRSRSKSERSRKRGSKRDSKAGSS 391

Query: 80  RKGGRLGTD---THAGSRRVKPTRRPPHQPLSSR-----STRSATRSPRRTGRWLNTMPS 131
           +K  +  TD   + + SR V   R       S R     S  + T    R+    N+   
Sbjct: 392 KKKKKEDTDRSQSRSPSRSVSKEREHAKSESSQREGRGESENAGTNQETRSRSRSNSKSK 451

Query: 132 WNVVRLCAMQPRVSRRTCAPLASAWKRSASRGALASTYWPRSRA 175
            N+       P  SR      +    RS SR   AS    RSR+
Sbjct: 452 PNL-------PSESRSRSKSASKTRSRSKSRSRSASRSPSRSRS 488


>gi|239754748 PREDICTED: hypothetical protein [Homo sapiens]
          Length = 229

 Score = 33.9 bits (76), Expect = 0.077
 Identities = 15/33 (45%), Positives = 19/33 (57%)

Query: 93  SRRVKPTRRPPHQPLSSRSTRSATRSPRRTGRW 125
           SRR+ P  R P  P  +   RSA   PR++GRW
Sbjct: 119 SRRLPPESRRPGGPAKTHPARSACCRPRKSGRW 151


>gi|239754668 PREDICTED: mucin 12 [Homo sapiens]
          Length = 1952

 Score = 33.9 bits (76), Expect = 0.077
 Identities = 32/126 (25%), Positives = 49/126 (38%), Gaps = 6/126 (4%)

Query: 3    ASPSSSMALVVPYTSITAQSGAPTGTPSRSRSRQ----PALTLAKRQPRRST--QKRTKS 56
            +SP S+   ++P ++ T   G PT +P  S S +    P  T       +ST      +S
Sbjct: 948  SSPGSTDTTLLPASTTTXLVGEPTTSPISSGSTETTALPGSTTTAGLSEKSTTFYSSPRS 1007

Query: 57   PVSAQPSGSTAAHVGLCSSRSGHRKGGRLGTDTHAGSRRVKPTRRPPHQPLSSRSTRSAT 116
            P +     ST +      S + H + G   T    GS  +    +      SS  +   T
Sbjct: 1008 PDTTLSPASTTSSGVSEESTTSHSRPGSTHTTAFPGSTTMPGVSQESTASHSSPGSTDTT 1067

Query: 117  RSPRRT 122
             SPR T
Sbjct: 1068 LSPRST 1073


>gi|239749196 PREDICTED: hypothetical protein XP_002346951 [Homo
           sapiens]
          Length = 528

 Score = 33.9 bits (76), Expect = 0.077
 Identities = 29/100 (29%), Positives = 39/100 (39%), Gaps = 3/100 (3%)

Query: 21  QSGAPTGTPSRSRSRQPALTLAKRQPRRSTQKRTKSPVSAQPSGSTAAHVGLCSSRSGHR 80
           Q  +P   PSRS        LA     RS  +R +   S   + + ++ +  CS+     
Sbjct: 186 QRVSPASCPSRSCPSAAVFILAVAA--RSCSRRRRVGTSGPEASTLSSGLLTCSAGEPPT 243

Query: 81  KGGRLGTDTHAGSRRVKPTRRPPHQPLSSRSTRSATRSPR 120
            GG+L       S R  P  R P  P  S  T S T  PR
Sbjct: 244 TGGKLTGPARLRSSRAPPPARRP-LPCESLRTPSGTAGPR 282


>gi|239743276 PREDICTED: hypothetical protein XP_002342815 [Homo
           sapiens]
          Length = 528

 Score = 33.9 bits (76), Expect = 0.077
 Identities = 29/100 (29%), Positives = 39/100 (39%), Gaps = 3/100 (3%)

Query: 21  QSGAPTGTPSRSRSRQPALTLAKRQPRRSTQKRTKSPVSAQPSGSTAAHVGLCSSRSGHR 80
           Q  +P   PSRS        LA     RS  +R +   S   + + ++ +  CS+     
Sbjct: 186 QRVSPASCPSRSCPSAAVFILAVAA--RSCSRRRRVGTSGPEASTLSSGLLTCSAGEPPT 243

Query: 81  KGGRLGTDTHAGSRRVKPTRRPPHQPLSSRSTRSATRSPR 120
            GG+L       S R  P  R P  P  S  T S T  PR
Sbjct: 244 TGGKLTGPARLRSSRAPPPARRP-LPCESLRTPSGTAGPR 282


  Database: hs.faa
    Posted date:  Aug 4, 2009  4:42 PM
  Number of letters in database: 18,247,518
  Number of sequences in database:  37,866
  
Lambda     K      H
   0.314    0.122    0.371 

Gapped
Lambda     K      H
   0.267   0.0410    0.140 


Matrix: BLOSUM62
Gap Penalties: Existence: 11, Extension: 1
Number of Hits to DB: 7,658,604
Number of Sequences: 37866
Number of extensions: 370312
Number of successful extensions: 2823
Number of sequences better than 10.0: 30
Number of HSP's better than 10.0 without gapping: 47
Number of HSP's successfully gapped in prelim test: 232
Number of HSP's that attempted gapping in prelim test: 2437
Number of HSP's gapped (non-prelim): 586
length of query: 180
length of database: 18,247,518
effective HSP length: 96
effective length of query: 84
effective length of database: 14,612,382
effective search space: 1227440088
effective search space used: 1227440088
T: 11
A: 40
X1: 16 ( 7.2 bits)
X2: 38 (14.6 bits)
X3: 64 (24.7 bits)
S1: 41 (21.6 bits)
S2: 58 (26.9 bits)
Search results were obtained with NCBI BLAST and RefSeq entries.