Search of human proteins with 239752704

Search of human proteins with 239752704

BLASTP 2.2.11 [Jun-05-2005]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= gi|239752704 PREDICTED: hypothetical protein [Homo sapiens]
         (207 letters)

Database: hs.faa 
           37,866 sequences; 18,247,518 total letters

Searching..................................................done

                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

gi|239752704 PREDICTED: hypothetical protein [Homo sapiens]           438   e-123
gi|239747246 PREDICTED: hypothetical protein [Homo sapiens]           438   e-123
gi|239741067 PREDICTED: hypothetical protein XP_002342075 [Homo ...   438   e-123
gi|209862765 RUN and SH3 domain containing 2 [Homo sapiens]            36   0.026
gi|55741719 RUN and SH3 domain containing 2 [Homo sapiens]             36   0.026
gi|14790190 spen homolog, transcriptional regulator [Homo sapiens]     33   0.17 
gi|189491742 ataxin 7 isoform b [Homo sapiens]                         32   0.29 
gi|4506797 ataxin 7 isoform a [Homo sapiens]                           32   0.29 
gi|169215483 PREDICTED: hypothetical protein isoform 2 [Homo sap...    32   0.50 
gi|133922600 splicing factor, arginine/serine-rich 16 [Homo sapi...    32   0.50 
gi|192807286 zinc finger and BTB domain containing 4 [Homo sapiens]    31   0.85 
gi|192807284 zinc finger and BTB domain containing 4 [Homo sapiens]    31   0.85 
gi|186700625 Rab-like GTP-binding protein 1 isoform 2 [Homo sapi...    30   1.1  
gi|239752939 PREDICTED: hypothetical protein [Homo sapiens]            30   1.1  
gi|239747479 PREDICTED: hypothetical protein XP_002347544 [Homo ...    30   1.1  
gi|239741351 PREDICTED: hypothetical protein XP_002342181 [Homo ...    30   1.1  
gi|239755593 PREDICTED: similar to hCG2018832 [Homo sapiens]           30   1.4  
gi|239753545 PREDICTED: similar to hCG2041452 [Homo sapiens]           30   1.4  
gi|239748117 PREDICTED: hypothetical protein XP_002346556 [Homo ...    30   1.4  
gi|239742016 PREDICTED: hypothetical protein XP_002342392 [Homo ...    30   1.4  
gi|154426272 hypothetical protein LOC54540 [Homo sapiens]              30   1.4  
gi|42741684 zinc finger protein 265 isoform 1 [Homo sapiens]           30   1.9  
gi|42741682 zinc finger protein 265 isoform 2 [Homo sapiens]           30   1.9  
gi|153792042 G protein-coupled receptor 178 [Homo sapiens]             30   1.9  
gi|83367077 mucin 16 [Homo sapiens]                                    29   2.5  
gi|239756098 PREDICTED: hypothetical protein [Homo sapiens]            29   2.5  
gi|239750629 PREDICTED: hypothetical protein XP_002347479 [Homo ...    29   2.5  
gi|239744936 PREDICTED: hypothetical protein XP_002343312 [Homo ...    29   2.5  
gi|9558733 transformer-2 alpha [Homo sapiens]                          29   2.5  
gi|46391104 hypothetical protein LOC83541 [Homo sapiens]               29   2.5  

>gi|239752704 PREDICTED: hypothetical protein [Homo sapiens]
          Length = 207

 Score =  438 bits (1126), Expect = e-123
 Identities = 207/207 (100%), Positives = 207/207 (100%)

Query: 1   MLASPPDRIHVPAPASSPMSRPEGWGWDHRQPLVTHSGALSGGLGSRPAATWSWCHSCSA 60
           MLASPPDRIHVPAPASSPMSRPEGWGWDHRQPLVTHSGALSGGLGSRPAATWSWCHSCSA
Sbjct: 1   MLASPPDRIHVPAPASSPMSRPEGWGWDHRQPLVTHSGALSGGLGSRPAATWSWCHSCSA 60

Query: 61  RPLSMWATSASPARPSSVRPSASRRPGTLFTRSRGSSQACRKAVRSRSGTSVCMYWSNLE 120
           RPLSMWATSASPARPSSVRPSASRRPGTLFTRSRGSSQACRKAVRSRSGTSVCMYWSNLE
Sbjct: 61  RPLSMWATSASPARPSSVRPSASRRPGTLFTRSRGSSQACRKAVRSRSGTSVCMYWSNLE 120

Query: 121 EADDHPDDTRGLTCYAGQLSREVFKGGTVSEGEEEEEGICVLHASLQHMIELFECRLSTV 180
           EADDHPDDTRGLTCYAGQLSREVFKGGTVSEGEEEEEGICVLHASLQHMIELFECRLSTV
Sbjct: 121 EADDHPDDTRGLTCYAGQLSREVFKGGTVSEGEEEEEGICVLHASLQHMIELFECRLSTV 180

Query: 181 PELKTKHDDTAAGLQLGWPKYHGGLDA 207
           PELKTKHDDTAAGLQLGWPKYHGGLDA
Sbjct: 181 PELKTKHDDTAAGLQLGWPKYHGGLDA 207


>gi|239747246 PREDICTED: hypothetical protein [Homo sapiens]
          Length = 207

 Score =  438 bits (1126), Expect = e-123
 Identities = 207/207 (100%), Positives = 207/207 (100%)

Query: 1   MLASPPDRIHVPAPASSPMSRPEGWGWDHRQPLVTHSGALSGGLGSRPAATWSWCHSCSA 60
           MLASPPDRIHVPAPASSPMSRPEGWGWDHRQPLVTHSGALSGGLGSRPAATWSWCHSCSA
Sbjct: 1   MLASPPDRIHVPAPASSPMSRPEGWGWDHRQPLVTHSGALSGGLGSRPAATWSWCHSCSA 60

Query: 61  RPLSMWATSASPARPSSVRPSASRRPGTLFTRSRGSSQACRKAVRSRSGTSVCMYWSNLE 120
           RPLSMWATSASPARPSSVRPSASRRPGTLFTRSRGSSQACRKAVRSRSGTSVCMYWSNLE
Sbjct: 61  RPLSMWATSASPARPSSVRPSASRRPGTLFTRSRGSSQACRKAVRSRSGTSVCMYWSNLE 120

Query: 121 EADDHPDDTRGLTCYAGQLSREVFKGGTVSEGEEEEEGICVLHASLQHMIELFECRLSTV 180
           EADDHPDDTRGLTCYAGQLSREVFKGGTVSEGEEEEEGICVLHASLQHMIELFECRLSTV
Sbjct: 121 EADDHPDDTRGLTCYAGQLSREVFKGGTVSEGEEEEEGICVLHASLQHMIELFECRLSTV 180

Query: 181 PELKTKHDDTAAGLQLGWPKYHGGLDA 207
           PELKTKHDDTAAGLQLGWPKYHGGLDA
Sbjct: 181 PELKTKHDDTAAGLQLGWPKYHGGLDA 207


>gi|239741067 PREDICTED: hypothetical protein XP_002342075 [Homo
           sapiens]
          Length = 207

 Score =  438 bits (1126), Expect = e-123
 Identities = 207/207 (100%), Positives = 207/207 (100%)

Query: 1   MLASPPDRIHVPAPASSPMSRPEGWGWDHRQPLVTHSGALSGGLGSRPAATWSWCHSCSA 60
           MLASPPDRIHVPAPASSPMSRPEGWGWDHRQPLVTHSGALSGGLGSRPAATWSWCHSCSA
Sbjct: 1   MLASPPDRIHVPAPASSPMSRPEGWGWDHRQPLVTHSGALSGGLGSRPAATWSWCHSCSA 60

Query: 61  RPLSMWATSASPARPSSVRPSASRRPGTLFTRSRGSSQACRKAVRSRSGTSVCMYWSNLE 120
           RPLSMWATSASPARPSSVRPSASRRPGTLFTRSRGSSQACRKAVRSRSGTSVCMYWSNLE
Sbjct: 61  RPLSMWATSASPARPSSVRPSASRRPGTLFTRSRGSSQACRKAVRSRSGTSVCMYWSNLE 120

Query: 121 EADDHPDDTRGLTCYAGQLSREVFKGGTVSEGEEEEEGICVLHASLQHMIELFECRLSTV 180
           EADDHPDDTRGLTCYAGQLSREVFKGGTVSEGEEEEEGICVLHASLQHMIELFECRLSTV
Sbjct: 121 EADDHPDDTRGLTCYAGQLSREVFKGGTVSEGEEEEEGICVLHASLQHMIELFECRLSTV 180

Query: 181 PELKTKHDDTAAGLQLGWPKYHGGLDA 207
           PELKTKHDDTAAGLQLGWPKYHGGLDA
Sbjct: 181 PELKTKHDDTAAGLQLGWPKYHGGLDA 207


>gi|209862765 RUN and SH3 domain containing 2 [Homo sapiens]
          Length = 1516

 Score = 35.8 bits (81), Expect = 0.026
 Identities = 33/101 (32%), Positives = 47/101 (46%), Gaps = 17/101 (16%)

Query: 2   LASPPDRIHVPAPASSPM-SRPEGWGWDHRQ-----------PLVTHSGALSGGLGSRPA 49
           LA+P  ++ VPAP+  P  S P   G   R+           PL ++S   S G    P+
Sbjct: 734 LAAPAAQVSVPAPSGEPQASTPRATGRGARKAGSEPETSRPSPLGSYSPIRSVG-PFGPS 792

Query: 50  ATWSWCHSCSARPLSMWATSASP----ARPSSVRPSASRRP 86
              S   SCS  P    AT + P    + PS+VRP+ S++P
Sbjct: 793 TDSSASTSCSPPPEQPTATESLPPWSHSCPSAVRPATSQQP 833


>gi|55741719 RUN and SH3 domain containing 2 [Homo sapiens]
          Length = 1516

 Score = 35.8 bits (81), Expect = 0.026
 Identities = 33/101 (32%), Positives = 47/101 (46%), Gaps = 17/101 (16%)

Query: 2   LASPPDRIHVPAPASSPM-SRPEGWGWDHRQ-----------PLVTHSGALSGGLGSRPA 49
           LA+P  ++ VPAP+  P  S P   G   R+           PL ++S   S G    P+
Sbjct: 734 LAAPAAQVSVPAPSGEPQASTPRATGRGARKAGSEPETSRPSPLGSYSPIRSVG-PFGPS 792

Query: 50  ATWSWCHSCSARPLSMWATSASP----ARPSSVRPSASRRP 86
              S   SCS  P    AT + P    + PS+VRP+ S++P
Sbjct: 793 TDSSASTSCSPPPEQPTATESLPPWSHSCPSAVRPATSQQP 833


>gi|14790190 spen homolog, transcriptional regulator [Homo sapiens]
          Length = 3664

 Score = 33.1 bits (74), Expect = 0.17
 Identities = 35/126 (27%), Positives = 49/126 (38%), Gaps = 15/126 (11%)

Query: 6   PDRIHVPAPASSPMSRPEGWGWDHRQPLVTHSGALSGGL-----GSRPAATWSWCHSCSA 60
           P+R     P   P +R +        P V H       +     G RP   +   HS S 
Sbjct: 191 PNRFDAHDPRYEPRAREQ-----FTLPSVVHRDIYRDDITREVRGRRPERNYQ--HSRSR 243

Query: 61  RPLSMWATSASPARPSSVRPSASRRPGTLFTRSRGSSQACRKAVRSRSGTSVCMYWSNLE 120
            P S  + + SP R +S     +R P    +RSR SS     ++ S S TS     S+  
Sbjct: 244 SPHSSQSRNQSPQRLASQASRPTRSPSGSGSRSRSSSS---DSISSSSSTSSDSSDSSSS 300

Query: 121 EADDHP 126
            +DD P
Sbjct: 301 SSDDSP 306


>gi|189491742 ataxin 7 isoform b [Homo sapiens]
          Length = 945

 Score = 32.3 bits (72), Expect = 0.29
 Identities = 26/79 (32%), Positives = 42/79 (53%), Gaps = 11/79 (13%)

Query: 44  LGSRPAATWSWCHSCSARPLSMWATSASPARPSSVR--PSA--SRRPGTLFT-------R 92
           L ++PAA+ +    CS +   + ++S+SP+ PS +   PS+  SR+P  L +        
Sbjct: 625 LNAQPAASGAMDPVCSMQSRQVSSSSSSPSTPSGLSSVPSSPMSRKPQKLKSSKSLRPKE 684

Query: 93  SRGSSQACRKAVRSRSGTS 111
           S G+S  C+ A  S SG S
Sbjct: 685 SSGNSTNCQNASSSTSGGS 703


>gi|4506797 ataxin 7 isoform a [Homo sapiens]
          Length = 892

 Score = 32.3 bits (72), Expect = 0.29
 Identities = 26/79 (32%), Positives = 42/79 (53%), Gaps = 11/79 (13%)

Query: 44  LGSRPAATWSWCHSCSARPLSMWATSASPARPSSVR--PSA--SRRPGTLFT-------R 92
           L ++PAA+ +    CS +   + ++S+SP+ PS +   PS+  SR+P  L +        
Sbjct: 625 LNAQPAASGAMDPVCSMQSRQVSSSSSSPSTPSGLSSVPSSPMSRKPQKLKSSKSLRPKE 684

Query: 93  SRGSSQACRKAVRSRSGTS 111
           S G+S  C+ A  S SG S
Sbjct: 685 SSGNSTNCQNASSSTSGGS 703


>gi|169215483 PREDICTED: hypothetical protein isoform 2 [Homo
           sapiens]
          Length = 356

 Score = 31.6 bits (70), Expect = 0.50
 Identities = 26/104 (25%), Positives = 45/104 (43%), Gaps = 4/104 (3%)

Query: 83  SRRPGTLFTRSRGSSQACRKAVRSRSGTSVCMYWSNLEEADDHPDD----TRGLTCYAGQ 138
           S R  +L  R   ++Q  +   R  +          LEEA+ H +D    +R L     +
Sbjct: 94  SERERSLLRRRSQAAQPLQGEAREAARERAERVRRRLEEAERHKEDLEQHSRQLQEQWEE 153

Query: 139 LSREVFKGGTVSEGEEEEEGICVLHASLQHMIELFECRLSTVPE 182
           LS ++F GG     +  E+ +     +LQ+ +EL E + +   E
Sbjct: 154 LSSQLFYGGEPQSQKSTEQQLAAQLVTLQNELELAETKCALQEE 197


>gi|133922600 splicing factor, arginine/serine-rich 16 [Homo
           sapiens]
          Length = 674

 Score = 31.6 bits (70), Expect = 0.50
 Identities = 28/82 (34%), Positives = 37/82 (45%), Gaps = 12/82 (14%)

Query: 20  SRPEGWGWDHRQPLVTHSGAL--SGGLGSRPAATWSWCHSCSARPLSMWATSASPARPSS 77
           +R  G+G   R    +HSG     GG G R        H  S+R  S W  S SP+R  S
Sbjct: 458 ARRGGYGPRRRSRSRSHSGDRYRRGGRGLR--------HHSSSRSRSSW--SLSPSRSRS 507

Query: 78  VRPSASRRPGTLFTRSRGSSQA 99
           +  S S  P    +RSR  S++
Sbjct: 508 LTRSRSHSPSPSQSRSRSRSRS 529


>gi|192807286 zinc finger and BTB domain containing 4 [Homo sapiens]
          Length = 1013

 Score = 30.8 bits (68), Expect = 0.85
 Identities = 21/52 (40%), Positives = 26/52 (50%), Gaps = 4/52 (7%)

Query: 1   MLASPPDRIHVPAPASSPMSRPEGWGWDHRQP-LVTHSGALSGGLGSRPAAT 51
           M ASPP     P PA  P   P    + H  P ++ H G+ SGG GS  A+T
Sbjct: 451 MPASPPPG---PPPAPEPGPPPSVITFAHPAPSVIVHGGSSSGGGGSGTAST 499


>gi|192807284 zinc finger and BTB domain containing 4 [Homo sapiens]
          Length = 1013

 Score = 30.8 bits (68), Expect = 0.85
 Identities = 21/52 (40%), Positives = 26/52 (50%), Gaps = 4/52 (7%)

Query: 1   MLASPPDRIHVPAPASSPMSRPEGWGWDHRQP-LVTHSGALSGGLGSRPAAT 51
           M ASPP     P PA  P   P    + H  P ++ H G+ SGG GS  A+T
Sbjct: 451 MPASPPPG---PPPAPEPGPPPSVITFAHPAPSVIVHGGSSSGGGGSGTAST 499


>gi|186700625 Rab-like GTP-binding protein 1 isoform 2 [Homo
           sapiens]
          Length = 520

 Score = 30.4 bits (67), Expect = 1.1
 Identities = 23/66 (34%), Positives = 26/66 (39%), Gaps = 16/66 (24%)

Query: 5   PPDRIHVPAPASSPMSRPEGWGWDHRQPLVTHSGALSGGLGSR----PAATWSWCHSCSA 60
           PP     PAP  S +SRP  WGW            L G LG R    P      CH C  
Sbjct: 344 PPACPSAPAPRRSIISRPPPWGW-----------RLRGALGRRGQWPPWGGGRACH-CLG 391

Query: 61  RPLSMW 66
           R L ++
Sbjct: 392 RHLPLY 397


>gi|239752939 PREDICTED: hypothetical protein [Homo sapiens]
          Length = 310

 Score = 30.4 bits (67), Expect = 1.1
 Identities = 34/110 (30%), Positives = 42/110 (38%), Gaps = 20/110 (18%)

Query: 28  DHRQPLVTHSGALSGGLG-----------SRPAATWSWCHSCSARPLSMWATSASPARPS 76
           D   P  T      GGL             R  +T       SA   S+W  +AS  R S
Sbjct: 148 DRASPFTTAGHLTCGGLKLKYRASPAGRLRRRGSTGLRAQGASAGSGSVWPRAASCLRAS 207

Query: 77  SVRPSASRRPGTLFTRSRGS--------SQACRKAVRSRSGTSVCMYWSN 118
           S   S+S R  +L +RSR S        S   R+  RS S +S C   SN
Sbjct: 208 SASRSSSARACSL-SRSRASRLPASVARSSPSRRQRRSSSCSSACCRCSN 256


>gi|239747479 PREDICTED: hypothetical protein XP_002347544 [Homo
           sapiens]
          Length = 310

 Score = 30.4 bits (67), Expect = 1.1
 Identities = 34/110 (30%), Positives = 42/110 (38%), Gaps = 20/110 (18%)

Query: 28  DHRQPLVTHSGALSGGLG-----------SRPAATWSWCHSCSARPLSMWATSASPARPS 76
           D   P  T      GGL             R  +T       SA   S+W  +AS  R S
Sbjct: 148 DRASPFTTAGHLTCGGLKLKYRASPAGRLRRRGSTGLRAQGASAGSGSVWPRAASCLRAS 207

Query: 77  SVRPSASRRPGTLFTRSRGS--------SQACRKAVRSRSGTSVCMYWSN 118
           S   S+S R  +L +RSR S        S   R+  RS S +S C   SN
Sbjct: 208 SASRSSSARACSL-SRSRASRLPASVARSSPSRRQRRSSSCSSACCRCSN 256


>gi|239741351 PREDICTED: hypothetical protein XP_002342181 [Homo
           sapiens]
          Length = 310

 Score = 30.4 bits (67), Expect = 1.1
 Identities = 34/110 (30%), Positives = 42/110 (38%), Gaps = 20/110 (18%)

Query: 28  DHRQPLVTHSGALSGGLG-----------SRPAATWSWCHSCSARPLSMWATSASPARPS 76
           D   P  T      GGL             R  +T       SA   S+W  +AS  R S
Sbjct: 148 DRASPFTTAGHLTCGGLKLKYRASPAGRLRRRGSTGLRAQGASAGSGSVWPRAASCLRAS 207

Query: 77  SVRPSASRRPGTLFTRSRGS--------SQACRKAVRSRSGTSVCMYWSN 118
           S   S+S R  +L +RSR S        S   R+  RS S +S C   SN
Sbjct: 208 SASRSSSARACSL-SRSRASRLPASVARSSPSRRQRRSSSCSSACCRCSN 256


>gi|239755593 PREDICTED: similar to hCG2018832 [Homo sapiens]
          Length = 212

 Score = 30.0 bits (66), Expect = 1.4
 Identities = 33/110 (30%), Positives = 39/110 (35%), Gaps = 26/110 (23%)

Query: 18  PMSR-PEG----WGWDHRQPLVTHSGALSG-----------GLGSRPAATWSWCHSCSAR 61
           P+SR P G    W W     L T   A  G           G  +R  A W    S S R
Sbjct: 46  PISRDPRGSGRLWQWGRLAVLKTEGFANLGVELLDAISPQQGFLARETACWGAERSTSPR 105

Query: 62  --PLSMWATS--------ASPARPSSVRPSASRRPGTLFTRSRGSSQACR 101
             PL+ WA           S A P S  P  + + G  + R   S  ACR
Sbjct: 106 STPLAFWAAPPPTRARALTSSAEPDSEPPPETLQEGRPWRREPASIDACR 155


>gi|239753545 PREDICTED: similar to hCG2041452 [Homo sapiens]
          Length = 410

 Score = 30.0 bits (66), Expect = 1.4
 Identities = 19/57 (33%), Positives = 26/57 (45%), Gaps = 4/57 (7%)

Query: 31 QPLVTHSGALSGGLGSRPAATWSWCHSCSARPLSMWATSASPARPSSVRPSASRRPG 87
          QPL++ +G+  GG G  P   W W  S  A  +         ARP+ VR  +   PG
Sbjct: 28 QPLLSEAGSGQGGAGLHP--RWVWGGSGGA--VGTGRRGGGAARPAPVRRGSPSSPG 80


>gi|239748117 PREDICTED: hypothetical protein XP_002346556 [Homo
          sapiens]
          Length = 410

 Score = 30.0 bits (66), Expect = 1.4
 Identities = 19/57 (33%), Positives = 26/57 (45%), Gaps = 4/57 (7%)

Query: 31 QPLVTHSGALSGGLGSRPAATWSWCHSCSARPLSMWATSASPARPSSVRPSASRRPG 87
          QPL++ +G+  GG G  P   W W  S  A  +         ARP+ VR  +   PG
Sbjct: 28 QPLLSEAGSGQGGAGLHP--RWVWGGSGGA--VGTGRRGGGAARPAPVRRGSPSSPG 80


>gi|239742016 PREDICTED: hypothetical protein XP_002342392 [Homo
          sapiens]
          Length = 410

 Score = 30.0 bits (66), Expect = 1.4
 Identities = 19/57 (33%), Positives = 26/57 (45%), Gaps = 4/57 (7%)

Query: 31 QPLVTHSGALSGGLGSRPAATWSWCHSCSARPLSMWATSASPARPSSVRPSASRRPG 87
          QPL++ +G+  GG G  P   W W  S  A  +         ARP+ VR  +   PG
Sbjct: 28 QPLLSEAGSGQGGAGLHP--RWVWGGSGGA--VGTGRRGGGAARPAPVRRGSPSSPG 80


>gi|154426272 hypothetical protein LOC54540 [Homo sapiens]
          Length = 789

 Score = 30.0 bits (66), Expect = 1.4
 Identities = 29/103 (28%), Positives = 42/103 (40%), Gaps = 8/103 (7%)

Query: 5   PPDRIHVPAPASSPMSRPEGWGWDHRQPLV-THSGALSGGLGSRPAATWSWCHSCSARPL 63
           PP  + VP+ A   ++ P+  G     P V + + A  G  GSRP   W+          
Sbjct: 622 PPASLEVPS-AKGQVAGPKQPGRVLELPKVGSCAEAGEGSRGSRPGPGWAGSPKTEKEKG 680

Query: 64  SMW-----ATSASPARPSSVRPSASRRPGTLFTRSRGSSQACR 101
           S W        A P    SV+P    RP +L  + +G S+  R
Sbjct: 681 SSWRNWPGEAKARPQEQESVQPPGPARPQSL-PQGKGRSRRSR 722


>gi|42741684 zinc finger protein 265 isoform 1 [Homo sapiens]
          Length = 330

 Score = 29.6 bits (65), Expect = 1.9
 Identities = 24/66 (36%), Positives = 33/66 (50%), Gaps = 2/66 (3%)

Query: 46  SRPAATWSWCHSCSARPLSMWATSASPARPSSVRPSASRRPGTLFTRSRGSSQACRKAVR 105
           S+  ++ S   S S+ P S  + S S +R SS   S SR      +RSRGS    R + R
Sbjct: 204 SKSRSSHSRSSSRSSSPSSSRSRSRSRSRSSSSSQSRSRSSSRERSRSRGSKS--RSSSR 261

Query: 106 SRSGTS 111
           S  G+S
Sbjct: 262 SHRGSS 267


>gi|42741682 zinc finger protein 265 isoform 2 [Homo sapiens]
          Length = 320

 Score = 29.6 bits (65), Expect = 1.9
 Identities = 24/66 (36%), Positives = 33/66 (50%), Gaps = 2/66 (3%)

Query: 46  SRPAATWSWCHSCSARPLSMWATSASPARPSSVRPSASRRPGTLFTRSRGSSQACRKAVR 105
           S+  ++ S   S S+ P S  + S S +R SS   S SR      +RSRGS    R + R
Sbjct: 204 SKSRSSHSRSSSRSSSPSSSRSRSRSRSRSSSSSQSRSRSSSRERSRSRGSKS--RSSSR 261

Query: 106 SRSGTS 111
           S  G+S
Sbjct: 262 SHRGSS 267


>gi|153792042 G protein-coupled receptor 178 [Homo sapiens]
          Length = 612

 Score = 29.6 bits (65), Expect = 1.9
 Identities = 22/71 (30%), Positives = 32/71 (45%), Gaps = 1/71 (1%)

Query: 32  PLVTHSGALSGGLGSRPAATWSWCHSCSARPLSMWATSASPARPSSVRPSASRRPGTLFT 91
           P  T + +  GG G  PA T +   S  AR  ++ A   SPARP +  P+ +  P +   
Sbjct: 5   PSPTQASSRGGGPGP-PAPTRAVSSSSRARGGALSALGPSPARPLTTSPAPAPPPRSRPA 63

Query: 92  RSRGSSQACRK 102
           R +   Q   K
Sbjct: 64  RQQPDPQCWEK 74


>gi|83367077 mucin 16 [Homo sapiens]
          Length = 14507

 Score = 29.3 bits (64), Expect = 2.5
 Identities = 17/57 (29%), Positives = 27/57 (47%)

Query: 56    HSCSARPLSMWATSASPARPSSVRPSASRRPGTLFTRSRGSSQACRKAVRSRSGTSV 112
             H  + RP+    TS SPA P  +    ++R  T  T  + ++ A +   R+   TSV
Sbjct: 10442 HRGTIRPVKGPQTSTSPASPKGLHTGGTKRMETTTTALKTTTTALKTTSRATLTTSV 10498


>gi|239756098 PREDICTED: hypothetical protein [Homo sapiens]
          Length = 260

 Score = 29.3 bits (64), Expect = 2.5
 Identities = 21/57 (36%), Positives = 30/57 (52%), Gaps = 5/57 (8%)

Query: 45  GSRPAATWSWCH--SCSARPLSMWATSASPARPSSVRPSASRRPGTLFTRSRGSSQA 99
           GS P  T       SCS+  +  +++S   +RP S R S+SR   + F+ SRG S A
Sbjct: 120 GSEPRGTSCGSRRISCSSLTICSYSSSFMESRPLSWRSSSSR---SFFSPSRGPSMA 173


>gi|239750629 PREDICTED: hypothetical protein XP_002347479 [Homo
           sapiens]
          Length = 271

 Score = 29.3 bits (64), Expect = 2.5
 Identities = 21/57 (36%), Positives = 30/57 (52%), Gaps = 5/57 (8%)

Query: 45  GSRPAATWSWCH--SCSARPLSMWATSASPARPSSVRPSASRRPGTLFTRSRGSSQA 99
           GS P  T       SCS+  +  +++S   +RP S R S+SR   + F+ SRG S A
Sbjct: 131 GSEPRGTSCGSRRISCSSLTICSYSSSFMESRPLSWRSSSSR---SFFSPSRGPSMA 184


>gi|239744936 PREDICTED: hypothetical protein XP_002343312 [Homo
           sapiens]
          Length = 271

 Score = 29.3 bits (64), Expect = 2.5
 Identities = 21/57 (36%), Positives = 30/57 (52%), Gaps = 5/57 (8%)

Query: 45  GSRPAATWSWCH--SCSARPLSMWATSASPARPSSVRPSASRRPGTLFTRSRGSSQA 99
           GS P  T       SCS+  +  +++S   +RP S R S+SR   + F+ SRG S A
Sbjct: 131 GSEPRGTSCGSRRISCSSLTICSYSSSFMESRPLSWRSSSSR---SFFSPSRGPSMA 184


>gi|9558733 transformer-2 alpha [Homo sapiens]
          Length = 282

 Score = 29.3 bits (64), Expect = 2.5
 Identities = 25/64 (39%), Positives = 30/64 (46%), Gaps = 1/64 (1%)

Query: 48  PAATWSWCHSCSARPLSMWATSASPARPSSVRPSASRRPG-TLFTRSRGSSQACRKAVRS 106
           PA   S   S S  P  +   S S +R  S   S SRR     +TRSR  S + R+  RS
Sbjct: 25  PARVKSESRSGSRSPSRVSKHSESHSRSRSKSRSRSRRHSHRRYTRSRSHSHSHRRRSRS 84

Query: 107 RSGT 110
           RS T
Sbjct: 85  RSYT 88


>gi|46391104 hypothetical protein LOC83541 [Homo sapiens]
          Length = 295

 Score = 29.3 bits (64), Expect = 2.5
 Identities = 43/161 (26%), Positives = 58/161 (36%), Gaps = 32/161 (19%)

Query: 12  PAPASSPMSRPEGWGWDHRQPLVTHSGALSGGLGSRPAATWSWCHSCSARPLSMWATSAS 71
           PA AS    R EG G   R P  T           RP  + S       RPL      AS
Sbjct: 120 PAEASRTPGRAEGAG---RPPPATPP---------RPPPSTSAVRRVDVRPLP-----AS 162

Query: 72  PARPS-----SVRPSASRRPGTLFTRSRGSSQACRKAVRSRSGTSVCMYWSNLEEADDHP 126
           PARP      +   S +R PG   ++S  S +  R A       + C            P
Sbjct: 163 PARPCPSPGPAAASSPARPPGLQRSKSDLSERFSRAAADLERFFNFCGL---------DP 213

Query: 127 DDTRGL-TCYAGQLSREVFKGGTVSEGEEEEEGICVLHASL 166
           ++ RGL   +  + S ++      S G    EG C   +S+
Sbjct: 214 EEARGLGVAHLARASSDIVSLAGPSAGPGSSEGGCSRRSSV 254


  Database: hs.faa
    Posted date:  Aug 4, 2009  4:42 PM
  Number of letters in database: 18,247,518
  Number of sequences in database:  37,866
  
Lambda     K      H
   0.315    0.129    0.420 

Gapped
Lambda     K      H
   0.267   0.0410    0.140 


Matrix: BLOSUM62
Gap Penalties: Existence: 11, Extension: 1
Number of Hits to DB: 9,861,611
Number of Sequences: 37866
Number of extensions: 494402
Number of successful extensions: 2091
Number of sequences better than 10.0: 30
Number of HSP's better than 10.0 without gapping: 28
Number of HSP's successfully gapped in prelim test: 68
Number of HSP's that attempted gapping in prelim test: 2020
Number of HSP's gapped (non-prelim): 129
length of query: 207
length of database: 18,247,518
effective HSP length: 98
effective length of query: 109
effective length of database: 14,536,650
effective search space: 1584494850
effective search space used: 1584494850
T: 11
A: 40
X1: 16 ( 7.3 bits)
X2: 38 (14.6 bits)
X3: 64 (24.7 bits)
S1: 41 (21.6 bits)
S2: 59 (27.3 bits)
Search results were obtained with NCBI BLAST and RefSeq entries.