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Search of human proteins with 239752201
BLASTP 2.2.11 [Jun-05-2005]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= gi|239752201 PREDICTED: hypothetical protein XP_002348147 [Homo
sapiens]
(935 letters)
Database: hs.faa
37,866 sequences; 18,247,518 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
gi|239752201 PREDICTED: hypothetical protein XP_002348147 [Homo ... 1931 0.0
gi|239757714 PREDICTED: hypothetical protein XP_002345529 [Homo ... 1448 0.0
gi|239752925 PREDICTED: hypothetical protein [Homo sapiens] 68 5e-11
gi|239747494 PREDICTED: hypothetical protein XP_002347536 [Homo ... 68 5e-11
gi|239741368 PREDICTED: hypothetical protein XP_002342205 [Homo ... 68 5e-11
gi|158854042 hypothetical protein LOC222183 [Homo sapiens] 60 7e-09
gi|118572613 splicing coactivator subunit SRm300 [Homo sapiens] 60 1e-08
gi|145309302 cell division cycle 2-like 5 isoform 1 [Homo sapiens] 51 6e-06
gi|145309300 cell division cycle 2-like 5 isoform 2 [Homo sapiens] 51 6e-06
gi|239753839 PREDICTED: hypothetical protein [Homo sapiens] 49 2e-05
gi|239743069 PREDICTED: hypothetical protein XP_002342750 [Homo ... 49 2e-05
gi|239508715 PREDICTED: hypothetical protein [Homo sapiens] 49 2e-05
gi|226509740 SR-related CTD-associated factor 1 [Homo sapiens] 49 2e-05
gi|239757130 PREDICTED: hypothetical protein FLJ22184 [Homo sapi... 49 3e-05
gi|239751637 PREDICTED: hypothetical protein FLJ22184 [Homo sapi... 49 3e-05
gi|239748099 PREDICTED: hypothetical protein [Homo sapiens] 49 3e-05
gi|239746609 PREDICTED: hypothetical protein XP_002343799 [Homo ... 49 3e-05
gi|42542379 serine/arginine repetitive matrix 1 [Homo sapiens] 49 3e-05
gi|169210256 PREDICTED: hypothetical protein [Homo sapiens] 48 4e-05
gi|61966741 TMF regulated nuclear protein [Homo sapiens] 48 4e-05
gi|239754081 PREDICTED: hypothetical protein XP_002345876 [Homo ... 48 5e-05
gi|239748667 PREDICTED: hypothetical protein XP_002346761 [Homo ... 48 5e-05
gi|239742692 PREDICTED: hypothetical protein XP_002342583 [Homo ... 48 5e-05
gi|239754489 PREDICTED: hypothetical protein [Homo sapiens] 47 8e-05
gi|239744552 PREDICTED: hypothetical protein [Homo sapiens] 47 8e-05
gi|27436957 membrane associated guanylate kinase, WW and PDZ dom... 47 1e-04
gi|169210481 PREDICTED: hypothetical protein [Homo sapiens] 46 1e-04
gi|169210045 PREDICTED: hypothetical protein [Homo sapiens] 46 1e-04
gi|51094101 DEAD (Asp-Glu-Ala-Asp) box polypeptide 54 isoform 2 ... 46 1e-04
gi|239741995 PREDICTED: hypothetical protein XP_002342368 [Homo ... 45 2e-04
>gi|239752201 PREDICTED: hypothetical protein XP_002348147 [Homo
sapiens]
Length = 935
Score = 1931 bits (5002), Expect = 0.0
Identities = 935/935 (100%), Positives = 935/935 (100%)
Query: 1 MGSNKDRGERNEERGLKFPSAAAQHTGCTVIHPNGSYAAGAGETWSFTRQLAVLHSRLLP 60
MGSNKDRGERNEERGLKFPSAAAQHTGCTVIHPNGSYAAGAGETWSFTRQLAVLHSRLLP
Sbjct: 1 MGSNKDRGERNEERGLKFPSAAAQHTGCTVIHPNGSYAAGAGETWSFTRQLAVLHSRLLP 60
Query: 61 GVAMKECDAAYWRRTKPHHHPRKPYQLPTCTWAHRGFSRPTDVPAEHSCRLPGRAAGRAG 120
GVAMKECDAAYWRRTKPHHHPRKPYQLPTCTWAHRGFSRPTDVPAEHSCRLPGRAAGRAG
Sbjct: 61 GVAMKECDAAYWRRTKPHHHPRKPYQLPTCTWAHRGFSRPTDVPAEHSCRLPGRAAGRAG 120
Query: 121 HLVGLVKTRVVHLVVALLLEDHRLKAVAPQDLAGQVGAAGLGGHGRGLHHALQDDHDLKV 180
HLVGLVKTRVVHLVVALLLEDHRLKAVAPQDLAGQVGAAGLGGHGRGLHHALQDDHDLKV
Sbjct: 121 HLVGLVKTRVVHLVVALLLEDHRLKAVAPQDLAGQVGAAGLGGHGRGLHHALQDDHDLKV 180
Query: 181 LRLQLLLAHAIKRAVLVDLVDNDDGRHQEDAVQADVIAHVEVPLVQGQVLALLGHVGLDE 240
LRLQLLLAHAIKRAVLVDLVDNDDGRHQEDAVQADVIAHVEVPLVQGQVLALLGHVGLDE
Sbjct: 181 LRLQLLLAHAIKRAVLVDLVDNDDGRHQEDAVQADVIAHVEVPLVQGQVLALLGHVGLDE 240
Query: 241 LGPHVGLHNVALAQVAHAPHEAELAVAHRNDRVVAEQQRLRPLLGPRHLGHDGANHEGVD 300
LGPHVGLHNVALAQVAHAPHEAELAVAHRNDRVVAEQQRLRPLLGPRHLGHDGANHEGVD
Sbjct: 241 LGPHVGLHNVALAQVAHAPHEAELAVAHRNDRVVAEQQRLRPLLGPRHLGHDGANHEGVD 300
Query: 301 DAAHDGLDHHSDDCQRALLCHAPEPIADGRLRLHREQEGTQEAVHVHDAGLGGHRGCSAT 360
DAAHDGLDHHSDDCQRALLCHAPEPIADGRLRLHREQEGTQEAVHVHDAGLGGHRGCSAT
Sbjct: 301 DAAHDGLDHHSDDCQRALLCHAPEPIADGRLRLHREQEGTQEAVHVHDAGLGGHRGCSAT 360
Query: 361 TRRRAPRRRHPWAGLQVTVEESDTPEEEAEKEPGDKEGRGEDHEHVAPARVHAGGEDVRH 420
TRRRAPRRRHPWAGLQVTVEESDTPEEEAEKEPGDKEGRGEDHEHVAPARVHAGGEDVRH
Sbjct: 361 TRRRAPRRRHPWAGLQVTVEESDTPEEEAEKEPGDKEGRGEDHEHVAPARVHAGGEDVRH 420
Query: 421 VALRLVAQVGEVHVALAVLLDEAVAALPPGHVGLAVAAVSVHVLKPAWSPGKTQGLRRRS 480
VALRLVAQVGEVHVALAVLLDEAVAALPPGHVGLAVAAVSVHVLKPAWSPGKTQGLRRRS
Sbjct: 421 VALRLVAQVGEVHVALAVLLDEAVAALPPGHVGLAVAAVSVHVLKPAWSPGKTQGLRRRS 480
Query: 481 RTGEMLGSEGLPRGHSDSAPRLSEAGQLGCRSNRDWASPRQQCPLLPIIECPGSILSFHN 540
RTGEMLGSEGLPRGHSDSAPRLSEAGQLGCRSNRDWASPRQQCPLLPIIECPGSILSFHN
Sbjct: 481 RTGEMLGSEGLPRGHSDSAPRLSEAGQLGCRSNRDWASPRQQCPLLPIIECPGSILSFHN 540
Query: 541 PQPQRQHSLPRPTSPLASTVQPDGDMVYPSPRCLPDSPQQGCEGQWIPEASLFQNNRSSL 600
PQPQRQHSLPRPTSPLASTVQPDGDMVYPSPRCLPDSPQQGCEGQWIPEASLFQNNRSSL
Sbjct: 541 PQPQRQHSLPRPTSPLASTVQPDGDMVYPSPRCLPDSPQQGCEGQWIPEASLFQNNRSSL 600
Query: 601 SGGRWGFNTPLPGWGFHSVTMDCTLAVGQTQALDSASLCKSWRDTLWMQYPENTALTPAT 660
SGGRWGFNTPLPGWGFHSVTMDCTLAVGQTQALDSASLCKSWRDTLWMQYPENTALTPAT
Sbjct: 601 SGGRWGFNTPLPGWGFHSVTMDCTLAVGQTQALDSASLCKSWRDTLWMQYPENTALTPAT 660
Query: 661 KQRHQPSEQPSRMRMRVCLCLCLSMHAQAERGLRADHRAICNEDAAGEAERRHPPPCHKS 720
KQRHQPSEQPSRMRMRVCLCLCLSMHAQAERGLRADHRAICNEDAAGEAERRHPPPCHKS
Sbjct: 661 KQRHQPSEQPSRMRMRVCLCLCLSMHAQAERGLRADHRAICNEDAAGEAERRHPPPCHKS 720
Query: 721 PALKLPGMTTGATTQTATLPDGQTDRARPWSPPAPGESRDRARGAGQPGPGSGSGAERAG 780
PALKLPGMTTGATTQTATLPDGQTDRARPWSPPAPGESRDRARGAGQPGPGSGSGAERAG
Sbjct: 721 PALKLPGMTTGATTQTATLPDGQTDRARPWSPPAPGESRDRARGAGQPGPGSGSGAERAG 780
Query: 781 PERRARDTQTRTRRDKLTDSARGGRARLTAGRRVRRESGRRRAGATSQGAIRRAASRARK 840
PERRARDTQTRTRRDKLTDSARGGRARLTAGRRVRRESGRRRAGATSQGAIRRAASRARK
Sbjct: 781 PERRARDTQTRTRRDKLTDSARGGRARLTAGRRVRRESGRRRAGATSQGAIRRAASRARK 840
Query: 841 GESRRPLPANSAGRPALPSPAAARSARGSWGLRASRPSRAAPRGPPNFQRCPAPRPRRRL 900
GESRRPLPANSAGRPALPSPAAARSARGSWGLRASRPSRAAPRGPPNFQRCPAPRPRRRL
Sbjct: 841 GESRRPLPANSAGRPALPSPAAARSARGSWGLRASRPSRAAPRGPPNFQRCPAPRPRRRL 900
Query: 901 GVSIVGPGRAHSAGRSSYSPKVPPVKDPKHLTLGV 935
GVSIVGPGRAHSAGRSSYSPKVPPVKDPKHLTLGV
Sbjct: 901 GVSIVGPGRAHSAGRSSYSPKVPPVKDPKHLTLGV 935
>gi|239757714 PREDICTED: hypothetical protein XP_002345529 [Homo
sapiens]
Length = 764
Score = 1448 bits (3748), Expect = 0.0
Identities = 699/715 (97%), Positives = 702/715 (98%), Gaps = 2/715 (0%)
Query: 1 MGSNKDRGERNEERGLKFPSAAAQHTGCTVIHPNGSYAAGAGETWSFTRQLAVLHSRLLP 60
MGSNKDRGERNEERGLKFPSAAAQHTGCTVIHPNGSYAAGAGETWSFTRQLAVLHSRLLP
Sbjct: 1 MGSNKDRGERNEERGLKFPSAAAQHTGCTVIHPNGSYAAGAGETWSFTRQLAVLHSRLLP 60
Query: 61 GVAMKECDAAYWRRTKPHHHPRKPYQLPTCTWAHRGFSRPTDVPAEHSCRLPGRAAGRAG 120
GVAMKECDAAYWRRTKPHHHPRKPYQLPTCTWAHRGFSRPTDVPAEHSCRLPGRAAGRAG
Sbjct: 61 GVAMKECDAAYWRRTKPHHHPRKPYQLPTCTWAHRGFSRPTDVPAEHSCRLPGRAAGRAG 120
Query: 121 HLVGLVKTRVVHLVVALLLEDHRLKAVAPQDLAGQVGAAGLGGHGRGLHHALQDDHDLKV 180
HLVGLVKTRVVHLVVALLLEDHRLKAVAPQDLAGQVGAAGLGGHGRGLHHALQDDHDLKV
Sbjct: 121 HLVGLVKTRVVHLVVALLLEDHRLKAVAPQDLAGQVGAAGLGGHGRGLHHALQDDHDLKV 180
Query: 181 LRLQLLLAHAIKRAVLVDLVDNDDGRHQEDAVQADVIAHVEVPLVQGQVLALLGHVGLDE 240
LRLQLLLAHAIKRAVLVDLVDNDDGRHQEDAVQADVIAHVEVPLVQGQVLALLGHVGLDE
Sbjct: 181 LRLQLLLAHAIKRAVLVDLVDNDDGRHQEDAVQADVIAHVEVPLVQGQVLALLGHVGLDE 240
Query: 241 LGPHVGLHNVALAQVAHAPHEAELAVAHRNDRVVAEQQRLRPLLGPRHLGHDGANHEGVD 300
LGPHVGLHNVALAQVAHAPHEAELAVAHRNDRVVAEQQRLRPLLGPRHLGHDGANHEGVD
Sbjct: 241 LGPHVGLHNVALAQVAHAPHEAELAVAHRNDRVVAEQQRLRPLLGPRHLGHDGANHEGVD 300
Query: 301 DAAHDGLDHHSDDCQRALLCHAPEPIADGRLRLHREQEGTQEAVHVHDAGLGGHRGCSAT 360
DAAHDGLDHHSDDCQRALLCHAPEPIADGRLRLHREQEGTQEAVHVHDAGLGGHRGCSAT
Sbjct: 301 DAAHDGLDHHSDDCQRALLCHAPEPIADGRLRLHREQEGTQEAVHVHDAGLGGHRGCSAT 360
Query: 361 TRRRAPRRRHPWAGLQVTVEESDTPEEEAEKEPGDKEGRGEDHEHVAPARVHAGGEDVRH 420
TRRRAPRRRHPWAGLQVTVEE DTPEEEAEKEPGDKEGRGEDHEHVAPARVHAGGEDVRH
Sbjct: 361 TRRRAPRRRHPWAGLQVTVEEGDTPEEEAEKEPGDKEGRGEDHEHVAPARVHAGGEDVRH 420
Query: 421 VALRLVAQVGEVHVALAVLLDEAVAALPPGHVGLAVAAVSVHVLKPAWSPGKTQGLRRRS 480
VALRLVAQVGEVHVALAVLLDEAVAALPPGHVGLAVAAVSVHVLKPAWSPGKTQGLRRRS
Sbjct: 421 VALRLVAQVGEVHVALAVLLDEAVAALPPGHVGLAVAAVSVHVLKPAWSPGKTQGLRRRS 480
Query: 481 RTGEMLGSEGLPRGHSDSAPRLSEAGQLGCRSNRDWASPRQQCPLLPIIECPGSILSFHN 540
RTGEMLGSEGLPRGHSDSAPRLSEAGQLGCRSNRDWASPRQQCPLLPIIECPGSILSFHN
Sbjct: 481 RTGEMLGSEGLPRGHSDSAPRLSEAGQLGCRSNRDWASPRQQCPLLPIIECPGSILSFHN 540
Query: 541 PQPQRQHSLPRPTSPLASTVQPDGDMVYPSPRCLPDSPQQGCEGQWIPEASLFQNNRSSL 600
PQPQRQHSLPRPTSPLASTVQPDGDMVYPSPRCLPDSPQQGCEGQWIPEASLFQNNRSSL
Sbjct: 541 PQPQRQHSLPRPTSPLASTVQPDGDMVYPSPRCLPDSPQQGCEGQWIPEASLFQNNRSSL 600
Query: 601 SGGRWGFNTPLPGWGFHSVTMDCTLAVGQTQALDSASLCKSWRDTLWMQYPENTALTPAT 660
SGGRWGFNTPLPGWGFHSVTMDCTLAVGQTQALDSASLCKSWRDTLWMQYPENTALTPAT
Sbjct: 601 SGGRWGFNTPLPGWGFHSVTMDCTLAVGQTQALDSASLCKSWRDTLWMQYPENTALTPAT 660
Query: 661 KQRHQPSEQPSRMRMRVCLCLCLSMHAQAERGLRADHRAICNEDAAGEAERRHPP 715
KQRHQPSEQPSRMRMRVCLCLCLSMHAQAERGLRA H + DA + + PP
Sbjct: 661 KQRHQPSEQPSRMRMRVCLCLCLSMHAQAERGLRAGHNP--DRDAPRRTDGQSPP 713
>gi|239752925 PREDICTED: hypothetical protein [Homo sapiens]
Length = 164
Score = 67.8 bits (164), Expect = 5e-11
Identities = 53/179 (29%), Positives = 75/179 (41%), Gaps = 15/179 (8%)
Query: 273 VVAEQQRLRPLLGPRHLGHDGANHEGVDDAAHDGLDHHSDDCQRALLCHAPEPIADGRLR 332
++AE L PLLGP +L +G E D L + + Q L E IA+G L
Sbjct: 1 MLAETNGLSPLLGPGNLRQEGTCDEDFQDGGEHQLGNKKHNGQWTFLTDVAEAIANGGLG 60
Query: 333 LHREQEGTQEAVHVHDAGLGGHRGCSATTRRRAPRRRHPWAGLQVTVEESDTPEEEAEKE 392
E+EG+ E VH++ G RG QV + S A++E
Sbjct: 61 FKGEEEGSSECVHLYHTGGVVGRGVQLQ---------------QVPMCHSYQIPHHAKEE 105
Query: 393 PGDKEGRGEDHEHVAPARVHAGGEDVRHVALRLVAQVGEVHVALAVLLDEAVAALPPGH 451
P +GR E+ + VAP V+ G V V LV V HVA + ++ + P H
Sbjct: 106 PCACKGRREEQKLVAPLHVNEGCPQVLEVEEALVGNVLHSHVAATIFCQDSPPSYPWAH 164
>gi|239747494 PREDICTED: hypothetical protein XP_002347536 [Homo
sapiens]
Length = 164
Score = 67.8 bits (164), Expect = 5e-11
Identities = 53/179 (29%), Positives = 75/179 (41%), Gaps = 15/179 (8%)
Query: 273 VVAEQQRLRPLLGPRHLGHDGANHEGVDDAAHDGLDHHSDDCQRALLCHAPEPIADGRLR 332
++AE L PLLGP +L +G E D L + + Q L E IA+G L
Sbjct: 1 MLAETNGLSPLLGPGNLRQEGTCDEDFQDGGEHQLGNKKHNGQWTFLTDVAEAIANGGLG 60
Query: 333 LHREQEGTQEAVHVHDAGLGGHRGCSATTRRRAPRRRHPWAGLQVTVEESDTPEEEAEKE 392
E+EG+ E VH++ G RG QV + S A++E
Sbjct: 61 FKGEEEGSSECVHLYHTGGVVGRGVQLQ---------------QVPMCHSYQIPHHAKEE 105
Query: 393 PGDKEGRGEDHEHVAPARVHAGGEDVRHVALRLVAQVGEVHVALAVLLDEAVAALPPGH 451
P +GR E+ + VAP V+ G V V LV V HVA + ++ + P H
Sbjct: 106 PCACKGRREEQKLVAPLHVNEGCPQVLEVEEALVGNVLHSHVAATIFCQDSPPSYPWAH 164
>gi|239741368 PREDICTED: hypothetical protein XP_002342205 [Homo
sapiens]
Length = 164
Score = 67.8 bits (164), Expect = 5e-11
Identities = 53/179 (29%), Positives = 75/179 (41%), Gaps = 15/179 (8%)
Query: 273 VVAEQQRLRPLLGPRHLGHDGANHEGVDDAAHDGLDHHSDDCQRALLCHAPEPIADGRLR 332
++AE L PLLGP +L +G E D L + + Q L E IA+G L
Sbjct: 1 MLAETNGLSPLLGPGNLRQEGTCDEDFQDGGEHQLGNKKHNGQWTFLTDVAEAIANGGLG 60
Query: 333 LHREQEGTQEAVHVHDAGLGGHRGCSATTRRRAPRRRHPWAGLQVTVEESDTPEEEAEKE 392
E+EG+ E VH++ G RG QV + S A++E
Sbjct: 61 FKGEEEGSSECVHLYHTGGVVGRGVQLQ---------------QVPMCHSYQIPHHAKEE 105
Query: 393 PGDKEGRGEDHEHVAPARVHAGGEDVRHVALRLVAQVGEVHVALAVLLDEAVAALPPGH 451
P +GR E+ + VAP V+ G V V LV V HVA + ++ + P H
Sbjct: 106 PCACKGRREEQKLVAPLHVNEGCPQVLEVEEALVGNVLHSHVAATIFCQDSPPSYPWAH 164
>gi|158854042 hypothetical protein LOC222183 [Homo sapiens]
Length = 653
Score = 60.5 bits (145), Expect = 7e-09
Identities = 58/197 (29%), Positives = 75/197 (38%), Gaps = 27/197 (13%)
Query: 755 PGESRDRARGAGQPGPGSGSGAERAGPERRARDTQTRTRRDKLTDSARGGRARLTAGRRV 814
PG + P P A A P AR ++ + R + RGGRA AGRR
Sbjct: 328 PGSAHSPPDKPSSPSPRVRDKAAAAAPTPPARGKESPSPRSAPSSQGRGGRAAGGAGRRR 387
Query: 815 RRESGRRRAGATSQGAIRRAASRAR----KGESR-----RPLPANSAGRPAL---PSPAA 862
RR RRR+ +++ RR R R +G SR R + +GR A P P +
Sbjct: 388 RRRRRRRRSRSSASAPRRRGRRRPRPAPPRGSSRSLSRARSSSDSGSGRGAPGPGPEPGS 447
Query: 863 ARSARGSWGLRASRPSRAAP------------RGPP---NFQRCPAPRPRRRLGVSIVGP 907
R G RP RA P RG P + R P P PR
Sbjct: 448 ERGHGGHGKRAKERPPRARPASTSPSPGAHGRRGGPEGKSSSRSPGPHPRSWSSSRSPSK 507
Query: 908 GRAHSAGRSSYSPKVPP 924
R+ SA + +SP P
Sbjct: 508 SRSRSAEKRPHSPSRSP 524
Score = 43.9 bits (102), Expect = 7e-04
Identities = 58/205 (28%), Positives = 73/205 (35%), Gaps = 53/205 (25%)
Query: 746 RARPWSPPAPGESRDRARGAGQPGPGSGSGAERAGPERRARDTQTRTRRDKLTDSARGGR 805
R RP P G SR +R GSG GA GPE ++ GG
Sbjct: 408 RRRPRPAPPRGSSRSLSRARSSSDSGSGRGAPGPGPEPG-------------SERGHGGH 454
Query: 806 ARLTAGRRVRRESGRRRAGAT--SQGAIRRAASRARKGESRRPLP-ANSAGRPALPSPAA 862
G+R + R R +T S GA R K SR P P S PS +
Sbjct: 455 -----GKRAKERPPRARPASTSPSPGAHGRRGGPEGKSSSRSPGPHPRSWSSSRSPSKSR 509
Query: 863 ARSARGSWGLRASRPSRAAPRGPPNFQRCPAPRPRRRLGVSIVGPGRA-HSAGRS----- 916
+RSA R PSR +P P++ L G GRA HS +
Sbjct: 510 SRSAE----KRPHSPSR-------------SPSPKKPLSRDKDGEGRARHSEAEATRARR 552
Query: 917 ---SYSP------KVPPVKDPKHLT 932
SYSP P +P+ +T
Sbjct: 553 RSRSYSPIRKRRRDSPSFMEPRRIT 577
Score = 42.7 bits (99), Expect = 0.002
Identities = 70/284 (24%), Positives = 103/284 (36%), Gaps = 46/284 (16%)
Query: 658 PATKQRHQPSEQPSRMRMRV---CLCLCLSMHAQAERGLRADHRAICNEDAAGEAERRH- 713
P K++ + + SR + R+ C C S + ++ ++ R D+ +RRH
Sbjct: 168 PKKKKKKKGGHRRSRKKRRLESECSCGSSSPLRKKKKSVKKHRRD--RSDSGSRRKRRHR 225
Query: 714 --PPPCH--------KSPALKLPGMTT----GATTQTATLPDGQTDRARP--WSPPAPGE 757
C K P + PG + ++ + +L +D P SP E
Sbjct: 226 SRSSKCKRKEKNKEKKRPHTESPGRRSHRHSSGSSHSPSLSSHYSDSRSPSRLSPKHRDE 285
Query: 758 SR----DRARGAGQPGPGSGSGAERAGPERRARDTQTRTRRDKLTDSARGGRARLTAGRR 813
R R+ G+ P P GSG P+R Q A GGR
Sbjct: 286 GRKTGSQRSSGSRSPSPSGGSGW--GSPQRNGGSGQR--------SGAHGGRPGSAHSPP 335
Query: 814 VRRESGRRRAGATSQGAIRRAASRARKGESRRPLPANSAGRPALPSPAAARSARGSWGLR 873
+ S R + A +R ++ S R P+ S GR + A R R R
Sbjct: 336 DKPSSPSPRVRDKAAAAAPTPPARGKESPSPRSAPS-SQGRGGRAAGGAGRRRRRRRRRR 394
Query: 874 ASRPSRAAPRGPPNFQRCPAPRPRRRLGVSIVGPGRAHSAGRSS 917
SR S +APR +R P P P R G R+ S RSS
Sbjct: 395 RSRSSASAPR--RRGRRRPRPAPPR-------GSSRSLSRARSS 429
>gi|118572613 splicing coactivator subunit SRm300 [Homo sapiens]
Length = 2752
Score = 59.7 bits (143), Expect = 1e-08
Identities = 65/227 (28%), Positives = 93/227 (40%), Gaps = 14/227 (6%)
Query: 712 RHPPPCHKSPALKLPGMTTGATTQT-ATLPDGQTDRARPWSPPAPGESRDRA---RGAGQ 767
R P +S + + PG + TQ + R+ SP G SR R RG +
Sbjct: 526 RSPQRRGRSRSPQRPGWSRSRNTQRRGRSRSARRGRSHSRSPATRGRSRSRTPARRGRSR 585
Query: 768 PGPGSGSGAERAGPERRARDTQTRTRRDKL---TDSARGGRARLTAGRRVRRESGRRRAG 824
+ + P RR ++T RR + T + R R R RR R S RR+G
Sbjct: 586 SRTPARRRSRSRTPTRRRSRSRTPARRGRSRSRTPARRRSRTRSPVRRRSRSRSPARRSG 645
Query: 825 AT-SQGAIRRAASR----ARKGESRRPLPANSAGRPALPSPAAARSARGSWGLRASRPSR 879
+ S+ RR SR AR+G SR PA +GR +PA +R R SR
Sbjct: 646 RSRSRTPARRGRSRSRTPARRGRSRSRTPARRSGRSRSRTPARRGRSRSRTPRRGRSRSR 705
Query: 880 AAPRGPPNFQRCPAPRPRRRLGVSIVGPGRAHSAGRSSYSPKVPPVK 926
+ R + R P+ R R G S ++ ++ R S S P +K
Sbjct: 706 SLVRRGRSHSR--TPQRRGRSGSSSERKNKSRTSQRRSRSNSSPEMK 750
Score = 52.8 bits (125), Expect = 2e-06
Identities = 71/273 (26%), Positives = 101/273 (36%), Gaps = 42/273 (15%)
Query: 651 PENTALTPATKQRHQPSEQPSRMRMRVCLCLCLSMHAQAERGLRADHRAICNEDAAGEAE 710
PE A TP +RH S QP L+ ++ + A D
Sbjct: 361 PEPPAPTPLLAERHGGSPQP------------LATTPLSQEPVNPPSEASPTRD------ 402
Query: 711 RRHPPPCHKSPALKLPGMTTGATTQTATLPDGQTDRARPWSPPAPGESRDRARGAGQPGP 770
R PP KSP KLP ++ ++ + P + R SP +P +P P
Sbjct: 403 -RSPP---KSPE-KLPQSSSSESSPPSPQPT-KVSRHASSSPESP-----------KPAP 445
Query: 771 GSGSGAERAGPERRARDTQTRTRRDKL---TDSARGGRARLTA----GRRVRRESGRRRA 823
GS E + + R +RDK T S R GR+R A GR R +R
Sbjct: 446 APGSHREISSSPTSKNRSHGRAKRDKSHSHTPSRRMGRSRSPATAKRGRSRSRTPTKRGH 505
Query: 824 GATSQGAIRRAASRARKGESRRPLPANSAGRPALPSPAAARSARGSWGLRASRPSRAAPR 883
+ RR+ S R G SR P + P P + +R+ + R++R R+ R
Sbjct: 506 SRSRSPQWRRSRSAQRWGRSRSPQRRGRSRSPQRPGWSRSRNTQRRGRSRSARRGRSHSR 565
Query: 884 GPPNFQRCPAPRPRRRLGVSIVGPGRAHSAGRS 916
P R + P RR P R S R+
Sbjct: 566 SPATRGRSRSRTPARRGRSRSRTPARRRSRSRT 598
Score = 51.2 bits (121), Expect = 4e-06
Identities = 54/171 (31%), Positives = 72/171 (42%), Gaps = 11/171 (6%)
Query: 747 ARPWSPPAPGESRDRARGAGQPGPGSGSGAERAGPERRARDTQTRTRRDKLTDSARG-GR 805
A+ W + R R+R +PG +R G R AR ++ +R + + RG R
Sbjct: 519 AQRWGRSRSPQRRGRSRSPQRPGWSRSRNTQRRGRSRSARRGRSHSR----SPATRGRSR 574
Query: 806 ARLTAGR-RVRRESGRRRAGATSQGAIRRAASR--ARKGESRRPLPANSAGRPALPSPAA 862
+R A R R R + RR + RR+ SR AR+G SR PA R SP
Sbjct: 575 SRTPARRGRSRSRTPARRRSRSRTPTRRRSRSRTPARRGRSRSRTPARRRSRTR--SPVR 632
Query: 863 ARSARGSWGLRASRP-SRAAPRGPPNFQRCPAPRPRRRLGVSIVGPGRAHS 912
RS S R+ R SR R + R PA R R R GR+ S
Sbjct: 633 RRSRSRSPARRSGRSRSRTPARRGRSRSRTPARRGRSRSRTPARRSGRSRS 683
Score = 50.4 bits (119), Expect = 8e-06
Identities = 70/280 (25%), Positives = 103/280 (36%), Gaps = 39/280 (13%)
Query: 658 PATKQRHQPSEQPSRMRMRVCLCLCLSMHAQAERGLRADHRAICNEDAAGEAERRHPPPC 717
P TK R P + SR L+ A+ R R+ ++ E R PP
Sbjct: 1678 PKTKSRTPPRRRSSRSSPE------LTRKARLSRRSRS-------ASSSPETRSRTPPRH 1724
Query: 718 HKSPALKLPGMTTGATT----QTATLPDGQTD--RARPWSPPAPGESRDRARGAGQPGPG 771
+SP++ P + + ++A+ P +T R R SP G R R+R +
Sbjct: 1725 RRSPSVSSPEPAEKSRSSRRRRSASSPRTKTTSRRGRSPSPKPRGLQRSRSRSRREKTRT 1784
Query: 772 SGSGAERAGPERRARDTQTRTRRDKLTDSARGG---RARLTAGRRVRRESGRRRAGATSQ 828
+ + +R Q R ++T RGG +R A + R S RRR G +
Sbjct: 1785 TRRRDRSGSSQSTSRRRQRSRSRSRVTRRRRGGSGYHSRSPARQESSRTSSRRRRGRS-- 1842
Query: 829 GAIRRAASRARKGESRRPLPANSAGRPALPSPAAARSARGSWGLRASRPSRAAPRGPPNF 888
R +RK R PA + SPA R +R L + R SR+
Sbjct: 1843 ----RTPPTSRKRSRSRTSPAPWKRSRSRASPATHRRSRSRTPLISRRRSRS-------- 1890
Query: 889 QRCPAPRPRRRLGVSIV---GPGRAHSAGRSSYSPKVPPV 925
+ P R R R S+ RA R + PPV
Sbjct: 1891 RTSPVSRRRSRSRTSVTRRRSRSRASPVSRRRSRSRTPPV 1930
Score = 41.6 bits (96), Expect = 0.003
Identities = 110/475 (23%), Positives = 159/475 (33%), Gaps = 65/475 (13%)
Query: 476 LRRRSRTG---EMLGSEGLP--RGHSDSAPRLSEAGQLGCRSNRDW-ASPRQQCPL---L 526
LR+RSR+G E+ L R S S+P + + + R+ +SP + P L
Sbjct: 1573 LRQRSRSGSSPEVDSKSRLSPRRSRSGSSPEVKDKPRAAPRAQSGSDSSPEPKAPAPRAL 1632
Query: 527 PIIECPGSILSFHNPQPQRQHSLPR-PTSPLASTVQPDGDMVYPSPRCLPDSPQQGCEGQ 585
P GS P P+ S P P S G P P+ +P + +
Sbjct: 1633 PRRSRSGSSSKGRGPSPEGSSSTESSPEHPPKSRTARRGSRSSPEPKTKSRTPPRRRSSR 1692
Query: 586 WIPE----ASLFQNNRSSLSGGRWGFNTPLPGWGFHSVTMDCTLAVGQTQALDSASLCKS 641
PE A L + +RS+ S TP SV+ + A +S
Sbjct: 1693 SSPELTRKARLSRRSRSASSSPETRSRTPPRHRRSPSVSSP-----------EPAEKSRS 1741
Query: 642 WRDTLWMQYPENTALTPATKQRHQPSEQPSRMRMRVCLCLCLSMHAQAERGLRADHRAIC 701
R +A +P TK + PS + R R R
Sbjct: 1742 SRR-------RRSASSPRTKTTSRRGRSPSPKPR--------GLQRSRSRSRREKTRTTR 1786
Query: 702 NEDAAGEAE---RRHPPPCHKSPALKLPGMTTG-----ATTQTATLPDGQTDRARPWSPP 753
D +G ++ RR +S + +G Q ++ + R R +PP
Sbjct: 1787 RRDRSGSSQSTSRRRQRSRSRSRVTRRRRGGSGYHSRSPARQESSRTSSRRRRGRSRTPP 1846
Query: 754 APGESRDRARGAGQPGPGSGSGAERAGPER-------------RARDTQTRTRRDKLTDS 800
R R+R + P S S A A R R+R + RR + S
Sbjct: 1847 T-SRKRSRSRTSPAPWKRSRSRASPATHRRSRSRTPLISRRRSRSRTSPVSRRRSRSRTS 1905
Query: 801 ARGGRARLTAGRRVRRESGRRRAGATSQGAIRRAASRARKGESRRPLPANSAGRPALPSP 860
R+R A RR S R T + + R + R+ SR P R P
Sbjct: 1906 VTRRRSRSRASPVSRRRSRSRTPPVTRRRSRSRTPTTRRRSRSRTPPVTRRRSRSRTPPV 1965
Query: 861 AAARS-ARGSWGLRASRPSRAAP--RGPPNFQRCPAPRPRRRLGVSIVGPGRAHS 912
RS +R S R SR +P R + P R R R S V R+ S
Sbjct: 1966 TRRRSRSRTSPITRRRSRSRTSPVTRRRSRSRTSPVTRRRSRSRTSPVTRRRSRS 2020
Score = 36.2 bits (82), Expect = 0.15
Identities = 65/290 (22%), Positives = 105/290 (36%), Gaps = 32/290 (11%)
Query: 657 TPATKQRHQPSEQPSRMRMRVCLCLCLSMHAQAERGLRADHRAICNEDAAGEAERRHPPP 716
TPA + R + S P+R R R + + R R R P
Sbjct: 577 TPARRGRSR-SRTPARRRSR-----SRTPTRRRSRSRTPARRGRSRSRTPARRRSRTRSP 630
Query: 717 CHKSPALKLPGMTTGATTQTATLPDGQTDRARPWSPPAPGESRDR--ARGAGQPGPGSGS 774
+ + P +G + G R+R +P G SR R AR +G+ + +
Sbjct: 631 VRRRSRSRSPARRSGRSRSRTPARRG---RSRSRTPARRGRSRSRTPARRSGRSRSRTPA 687
Query: 775 --GAERAGPERRARDTQ---TRTRRDKLTDSARGGRARLTAGRRVRRESGRRRAGATSQG 829
G R+ RR R R R R GR+ ++ R+ + + +RR+ + S
Sbjct: 688 RRGRSRSRTPRRGRSRSRSLVRRGRSHSRTPQRRGRSGSSSERKNKSRTSQRRSRSNSSP 747
Query: 830 AIRRAASRAR----------KGESRRPLPANSAGRPALPSPAAARSARGSWGLRASRPSR 879
++++ +R K +SR L + +G P + R S S +
Sbjct: 748 EMKKSRISSRRSRSLSSPRSKAKSRLSLRRSLSGSSPCPKQKSQTPPRRS--RSGSSQPK 805
Query: 880 AAPRGPPNFQRCPAPRPRRRLGVSIVGPGRAHSAGRSSYSPKVPPVKDPK 929
A R PP R + P ++ + P R S SS PKV P+
Sbjct: 806 AKSRTPPRRSRSSSSPPPKQKSKT---PSR-QSHSSSSPHPKVKSGTPPR 851
Score = 32.7 bits (73), Expect = 1.6
Identities = 37/176 (21%), Positives = 71/176 (40%), Gaps = 15/176 (8%)
Query: 746 RARPWSPPAPGESRDRARGAGQPGPGSGSGAERAGPERRARDTQTRTRRDKLTDSARGGR 805
R+ S P P + + G R P RR+R + + + K +R
Sbjct: 777 RSLSGSSPCPKQKSQTPPRRSRSGSSQPKAKSRT-PPRRSRSSSSPPPKQKSKTPSRQSH 835
Query: 806 ARLTAGRRVRRESGRRRAGATSQGAIRRAASRARKG-ESRRPLPANSAGRPALPSPAAAR 864
+ + +V+ + R+ TS A ++ + R+ P P + P+ S + +
Sbjct: 836 SSSSPHPKVKSGTPPRQGSITSPQANEQSVTPQRRSCFESSPDPELKSRTPSRHSCSGSS 895
Query: 865 SARGSWGLRASRPSRAAPRGPPNFQRCPAPRPRRRLGVSIVGPGRAHSAGRSSYSP 920
R +++S P R +P R +P+P+ + +I+ P + +G SS SP
Sbjct: 896 PPR----VKSSTPPRQSP------SRSSSPQPKVK---AIISPRQRSHSGSSSPSP 938
Score = 32.0 bits (71), Expect = 2.8
Identities = 30/165 (18%), Positives = 60/165 (36%), Gaps = 1/165 (0%)
Query: 703 EDAAGEAERRHPPPCHKSPALKLPGMTTGATTQTATLPDGQTDRARPWSPPAPGESRDRA 762
++A E P P + ++ +++ +++ + + S + S +
Sbjct: 2587 KEAVREGRPPEPTPAKRKRRSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSS 2646
Query: 763 RGAGQPGPGSGSGAERAGPERRARDTQTRTRRDKLTDSARGGRARLTAGRRVRRESGRRR 822
PG + + A P++ + K DS R R+ + RR S +
Sbjct: 2647 SSPSPAKPGPQALPKPASPKKPPPGERRSRSPRKPIDSLRDSRSLSYSPVERRRPSPQPS 2706
Query: 823 AGATSQGAIRRAASRARKGESRRPLPANSAGRPALPSPAAARSAR 867
+ R + R ++G+SR P P+ P P RS+R
Sbjct: 2707 PRDQQSSSSERGSRRGQRGDSRSPSHKRRRETPS-PRPMRHRSSR 2750
Score = 30.8 bits (68), Expect = 6.2
Identities = 32/132 (24%), Positives = 50/132 (37%), Gaps = 18/132 (13%)
Query: 761 RARGAGQPGPGSGSGAERAGPERRARDTQTRTRRDKLTDSARGGRARLTAGRRVRRESGR 820
RAR A QP P E P R++ + T + + + GRR S R
Sbjct: 156 RAREAKQPAP------EPPKPYSLVRESSSSRSP---TPKQKKKKKKKDRGRRSESSSPR 206
Query: 821 RRAGATSQGAIRRAASRARKGESRRPLPAN---------SAGRPALPSPAAARSARGSWG 871
R +S+ R+ S ++K + R P P + R P+P + R+ R +
Sbjct: 207 RERKKSSKKKKHRSESESKKRKHRSPTPKSKRKSKDKKRKRSRSTTPAPKSRRAHRSTSA 266
Query: 872 LRASRPSRAAPR 883
AS + R
Sbjct: 267 DSASSSDTSRSR 278
Score = 30.8 bits (68), Expect = 6.2
Identities = 55/227 (24%), Positives = 80/227 (35%), Gaps = 20/227 (8%)
Query: 712 RHPPPCHKSPALKLPGMTTGATTQTATLPDGQTDRARPWSPPAPGESRDRA------RGA 765
R PP + + P +T + + + R+R SP SR R R
Sbjct: 1949 RTPPVTRRRSRSRTPPVTRRRSRSRTSPITRRRSRSRT-SPVTRRRSRSRTSPVTRRRSR 2007
Query: 766 GQPGPGSGSGAERAGPERRARDTQTRT----RRDKLTDSARGGRARLTAGRRVRRESGRR 821
+ P + + P R +++RT R+ + S R R + R R G+R
Sbjct: 2008 SRTSPVTRRRSRSRTPPAIRRRSRSRTPLLPRKRSRSRSPLAIRRR-SRSRTPRTARGKR 2066
Query: 822 RAGATSQGAIRRAASRARKGESRRPL-PANSAGRPALPSPAAARSARGSWGLRASRPSRA 880
+ RR+AS + SR PA + P A S+R S SRPS +
Sbjct: 2067 SLTRSPPAIRRRSASGSSSDRSRSATPPATRNHSGSRTPPVALNSSRMSC---FSRPSMS 2123
Query: 881 APRGPPNFQRCPAPRPRRRLGVSIVGPGRAHSAGRSSYSPKVPPVKD 927
P RC +P LG S AG S P + D
Sbjct: 2124 ----PTPLDRCRSPGMLEPLGSSRTPMSVLQQAGGSMMDGPGPRIPD 2166
Score = 30.4 bits (67), Expect = 8.0
Identities = 66/261 (25%), Positives = 85/261 (32%), Gaps = 54/261 (20%)
Query: 711 RRHPPPCHKSPALKLPGMTTGATTQTATLPDGQTDRARPWSPPAPGESRDRA-----RGA 765
R P P +S + P + ++T + + R+R SP + SR R R
Sbjct: 1855 RTSPAPWKRSRSRASPATHRRSRSRTPLI-SRRRSRSRT-SPVSRRRSRSRTSVTRRRSR 1912
Query: 766 GQPGPGSGSGAERAGP-----ERRARDTQTRTRRDKLTDSARGGRARLTAGRRVRRES-- 818
+ P S + P R+R TR R T R+R RR S
Sbjct: 1913 SRASPVSRRRSRSRTPPVTRRRSRSRTPTTRRRSRSRTPPVTRRRSRSRTPPVTRRRSRS 1972
Query: 819 ------GRRRAGATSQGAIRRAASRA-----------------RKGESRRPLPANSAGR- 854
RR TS RR+ SR R+ SR P R
Sbjct: 1973 RTSPITRRRSRSRTSPVTRRRSRSRTSPVTRRRSRSRTSPVTRRRSRSRTPPAIRRRSRS 2032
Query: 855 --PALP-------SPAAARSARGSWGLRASRPSRAAPRGPPNFQRCPAPRPRRRLGVSIV 905
P LP SP A R S R +R R+ R PP +R A S
Sbjct: 2033 RTPLLPRKRSRSRSPLAIRRRSRSRTPRTARGKRSLTRSPPAIRRRSASGSSSDRSRSAT 2092
Query: 906 GPG-RAHSAGRSSYSPKVPPV 925
P R HS R+ PPV
Sbjct: 2093 PPATRNHSGSRT------PPV 2107
>gi|145309302 cell division cycle 2-like 5 isoform 1 [Homo sapiens]
Length = 1512
Score = 50.8 bits (120), Expect = 6e-06
Identities = 52/179 (29%), Positives = 75/179 (41%), Gaps = 22/179 (12%)
Query: 762 ARGAGQPGPGSGSGAERAGPERRARDTQTRTRRDKLTDSARGGRARLTAGRRVRRESGRR 821
A AG G GS A +G +RR ++ R RRD+ + S R R RR G+R
Sbjct: 168 ATAAGGTGGSGGSPASSSGTQRRGEGSERRPRRDRRSSSGRSKERH----REHRRRDGQR 223
Query: 822 RAGATSQGAIRRAASRARKGESRRPLPANSAG-----RPALPSPAAARSARGSWGLRASR 876
S+ R + S + E + ++S+G A S +++R R S R+
Sbjct: 224 GGSEASKSRSRHSHSGEERAEVAKSGSSSSSGGRRKSASATSSSSSSRKDRDSKAHRSRT 283
Query: 877 PSRAAP----RGPPNFQRCPAPRP---RRRLGVSIVGPGR-----AHSAGRSSYSPKVP 923
S P + PP R P RRR +S +G GR +H A +S S K P
Sbjct: 284 KSSKEPPSAYKEPPKAYREDKTEPKAYRRRRSLSPLG-GRDDSPVSHRASQSLRSRKSP 341
>gi|145309300 cell division cycle 2-like 5 isoform 2 [Homo sapiens]
Length = 1452
Score = 50.8 bits (120), Expect = 6e-06
Identities = 52/179 (29%), Positives = 75/179 (41%), Gaps = 22/179 (12%)
Query: 762 ARGAGQPGPGSGSGAERAGPERRARDTQTRTRRDKLTDSARGGRARLTAGRRVRRESGRR 821
A AG G GS A +G +RR ++ R RRD+ + S R R RR G+R
Sbjct: 168 ATAAGGTGGSGGSPASSSGTQRRGEGSERRPRRDRRSSSGRSKERH----REHRRRDGQR 223
Query: 822 RAGATSQGAIRRAASRARKGESRRPLPANSAG-----RPALPSPAAARSARGSWGLRASR 876
S+ R + S + E + ++S+G A S +++R R S R+
Sbjct: 224 GGSEASKSRSRHSHSGEERAEVAKSGSSSSSGGRRKSASATSSSSSSRKDRDSKAHRSRT 283
Query: 877 PSRAAP----RGPPNFQRCPAPRP---RRRLGVSIVGPGR-----AHSAGRSSYSPKVP 923
S P + PP R P RRR +S +G GR +H A +S S K P
Sbjct: 284 KSSKEPPSAYKEPPKAYREDKTEPKAYRRRRSLSPLG-GRDDSPVSHRASQSLRSRKSP 341
>gi|239753839 PREDICTED: hypothetical protein [Homo sapiens]
Length = 257
Score = 49.3 bits (116), Expect = 2e-05
Identities = 56/169 (33%), Positives = 68/169 (40%), Gaps = 8/169 (4%)
Query: 746 RARPWSPPAPGESRDRARGAGQPGPG-SGSGAERAGPERRARDTQTRTRRDKLTDSARGG 804
R+ W PPA SR R AG GP G RA RR+ T + A G
Sbjct: 80 RSAAWGPPARA-SRAAGRRAGPAGPPCRAPGRGRAAATRRSPAPGTARGSPAGVERAGGA 138
Query: 805 RARLTAG-RRVRRESGRRRAGATSQGAIRRAASRARKGESRRPLPANSAGRPALPSPAAA 863
A +AG R V G TS GA RA R R P++S A+P P A
Sbjct: 139 TAASSAGTRSVPARRLPPPCGGTSLGAGSRALRRPGSAALPRS-PSSSRRWAAMPGPGAP 197
Query: 864 R-SARGSWGLR---ASRPSRAAPRGPPNFQRCPAPRPRRRLGVSIVGPG 908
R A G+W + A+ P+ AA PP AP R V+ PG
Sbjct: 198 RPGAPGTWPVGFAVAAPPAAAASVAPPPPAVAGAPAAAFRGWVAAPDPG 246
Score = 31.6 bits (70), Expect = 3.6
Identities = 35/109 (32%), Positives = 46/109 (42%), Gaps = 22/109 (20%)
Query: 838 ARKGESRRPL-PANSAG---RPALPSPAAARSARGSWG--LRASRPS--RAAPRGPP--- 886
AR+G S + PA SAG P P + +WG RASR + RA P GPP
Sbjct: 48 ARRGHSPPTVAPAASAGSQEHPGAGGPLCFPARSAAWGPPARASRAAGRRAGPAGPPCRA 107
Query: 887 -------NFQRCPAPRPRRRLGVSIVGPGRAHSAG----RSSYSPKVPP 924
+R PAP R + G A +A RS + ++PP
Sbjct: 108 PGRGRAAATRRSPAPGTARGSPAGVERAGGATAASSAGTRSVPARRLPP 156
>gi|239743069 PREDICTED: hypothetical protein XP_002342750 [Homo
sapiens]
Length = 231
Score = 48.9 bits (115), Expect = 2e-05
Identities = 57/178 (32%), Positives = 66/178 (37%), Gaps = 40/178 (22%)
Query: 731 GATTQTATLPDGQTDRARPWSPPAPGESRDRARGAGQPGPGSGSGAERAGPERRARDTQ- 789
GA TA PD + P PAP + G G G G GA+ RRA+ Q
Sbjct: 57 GAAPATAESPDTPEE---PPEEPAPAIAP-----GGSGGGGGGCGAQHWAAGRRAQREQG 108
Query: 790 ----------------TRTRRDKLTDSARGGRARLTAGRRVRRESGRRRAGATSQGAIRR 833
+ RR +L RGGR AGR R+ G RAGA R
Sbjct: 109 AGAAVLADFGHVRAAPSGLRRRRL-QRRRGGRGGRGAGRA--RKPGPDRAGAERSLPAHR 165
Query: 834 AASRARKGESRRPLPAN-------SAGRPALPSPAAARSARGSWGLRASRPSRAAPRG 884
A AR P+P + SAG A P P R SW R S P R A G
Sbjct: 166 APRLARP-----PVPPSVAHVARASAGLGARPVPGGPAGPRESWARRTSSPPRGAAGG 218
>gi|239508715 PREDICTED: hypothetical protein [Homo sapiens]
Length = 231
Score = 48.9 bits (115), Expect = 2e-05
Identities = 57/178 (32%), Positives = 66/178 (37%), Gaps = 40/178 (22%)
Query: 731 GATTQTATLPDGQTDRARPWSPPAPGESRDRARGAGQPGPGSGSGAERAGPERRARDTQ- 789
GA TA PD + P PAP + G G G G GA+ RRA+ Q
Sbjct: 57 GAAPATAESPDTPEE---PPEEPAPAIAP-----GGSGGGGGGCGAQHWAAGRRAQREQG 108
Query: 790 ----------------TRTRRDKLTDSARGGRARLTAGRRVRRESGRRRAGATSQGAIRR 833
+ RR +L RGGR AGR R+ G RAGA R
Sbjct: 109 AGAAVLADFGHVRAAPSGLRRRRL-QRRRGGRGGRGAGRA--RKPGPDRAGAERSLPAHR 165
Query: 834 AASRARKGESRRPLPAN-------SAGRPALPSPAAARSARGSWGLRASRPSRAAPRG 884
A AR P+P + SAG A P P R SW R S P R A G
Sbjct: 166 APRLARP-----PVPPSVAHVARASAGLGARPVPGGPAGPRESWARRTSSPPRGAAGG 218
>gi|226509740 SR-related CTD-associated factor 1 [Homo sapiens]
Length = 1312
Score = 48.9 bits (115), Expect = 2e-05
Identities = 59/206 (28%), Positives = 81/206 (39%), Gaps = 20/206 (9%)
Query: 690 ERGLRADHRAICNEDAAGEAERRHPPPCHKSPALKLPGMTTGATTQTATLPDGQTDRARP 749
+R R R+ A A PP KS + +G + A+ G + P
Sbjct: 489 QRRERYRQRSPSPAPAPAPAAAAGPPTRKKS---RRERKRSGEAKEAASSSSGT--QPAP 543
Query: 750 WSPPAPGESRDRARGAGQPGPGSGSGAERAGPERRARDTQTRTRRDKLTDSARGG--RAR 807
+P +P +S+ +PG + S A R R+R TR RR + TD RGG R+R
Sbjct: 544 PAPASPWDSKKHRSRDRKPGSHASSSARRRS-RSRSRSRSTR-RRSRSTDRRRGGSRRSR 601
Query: 808 LTAGRRVRRESGRRRAGATSQGAIRR----------AASRARKGESR-RPLPANSAGRPA 856
RR RR S +S + RR S+ +K SR R + G
Sbjct: 602 SREKRRRRRRSASPPPATSSSSSSRRERHRGKHRDGGGSKKKKKRSRSRGEKRSGDGSEK 661
Query: 857 LPSPAAARSARGSWGLRASRPSRAAP 882
P+PA S S G R SR A P
Sbjct: 662 APAPAPPPSGSTSCGDRDSRRRGAVP 687
Score = 46.2 bits (108), Expect = 1e-04
Identities = 49/188 (26%), Positives = 76/188 (40%), Gaps = 17/188 (9%)
Query: 752 PPAPGESRDRARGAGQP--GPGSGSGAERAGPERRAR-DTQTRTRRDKLTDSARGGRARL 808
PP +SR + +G+ S SG + A P + D++ RD+ S AR
Sbjct: 513 PPTRKKSRRERKRSGEAKEAASSSSGTQPAPPAPASPWDSKKHRSRDRKPGSHASSSARR 572
Query: 809 TAGRRVRRESGRRRAGATSQGAIRRAASRARKGESRRPLPANSAGRPALPSPAAARSAR- 867
+ R R S RRR+ +T + R + R+R E RR +++ PA S +++R R
Sbjct: 573 RSRSRSRSRSTRRRSRSTDRR--RGGSRRSRSREKRRRRRRSASPPPATSSSSSSRRERH 630
Query: 868 --------GSWGLRASRPSRAAPRGPPNFQRCPAPRPRRRLGVSIVGPGRAHSAGRSSYS 919
GS + SR R ++ PAP P S G S R +
Sbjct: 631 RGKHRDGGGSKKKKKRSRSRGEKRSGDGSEKAPAPAPPPSGSTSC---GDRDSRRRGAVP 687
Query: 920 PKVPPVKD 927
P + + D
Sbjct: 688 PSIQDLTD 695
>gi|239757130 PREDICTED: hypothetical protein FLJ22184 [Homo
sapiens]
Length = 855
Score = 48.5 bits (114), Expect = 3e-05
Identities = 72/232 (31%), Positives = 95/232 (40%), Gaps = 28/232 (12%)
Query: 719 KSPALKLPGMTTGATTQTATLPDGQTDRARPWS------PPAPGESRDRARGAG--QPG- 769
+ P + G GAT + G T A S PPA G +RA A PG
Sbjct: 55 RKPLAERAGGIGGATIPESAPRAGPTRSAGTSSRNPASRPPASGRG-ERAPPAKNTSPGP 113
Query: 770 ---PGSGSGAERAGP--ERRARDTQTRT-RRDKLTDSARGGRARLTAGRRVRRESGRRRA 823
PG SG R GP ++ R + T R K T++ + R+ L+AG RR++
Sbjct: 114 VSSPGRASGTTRPGPLGQKGLRISAEETVARGKATEAPK--RSALSAG--ARRDTSGPTP 169
Query: 824 GATSQGAIRRAASRARKGESRRPLPANSAGRPALPSPAAARSARGSWGLRASRPSRAAPR 883
G S RR SRA E P PA SA RP P+ +S + + PS AA R
Sbjct: 170 GTPSPAMARR--SRAAGTEVGLPRPAPSA-RPRPPTEGPRKSVSSASEHSTTEPSPAARR 226
Query: 884 GPP---NFQRCPAPRPRRRLGVSIVGPGRAHSAGRSS-YSPKVPPVKDPKHL 931
P QR PA R + P R+ + R + +P P PK L
Sbjct: 227 RPSAGGGLQR-PASRSLSSSATPLSSPARSGPSARGTPRAPAHPSQPKPKGL 277
Score = 40.8 bits (94), Expect = 0.006
Identities = 64/258 (24%), Positives = 93/258 (36%), Gaps = 52/258 (20%)
Query: 705 AAGEAERRHPPPCHKSPA-LKLPGMTTGAT------------TQTATLPDGQTDRARPWS 751
A+G ER PP + SP + PG +G T + T+ G+ A S
Sbjct: 96 ASGRGERA-PPAKNTSPGPVSSPGRASGTTRPGPLGQKGLRISAEETVARGKATEAPKRS 154
Query: 752 PPAPGESRDRARGA-GQPGP---------GSGSGAERAGPERRARDTQTRTRRD------ 795
+ G RD + G P P G+ G R P R R R+
Sbjct: 155 ALSAGARRDTSGPTPGTPSPAMARRSRAAGTEVGLPRPAPSARPRPPTEGPRKSVSSASE 214
Query: 796 -KLTDSARGGRARLTAGRRVRRESGRRRAGATSQGAIRRAASRARKGESRRPLPANSAGR 854
T+ + R R +AG ++R + R + + + +S AR G S R P +
Sbjct: 215 HSTTEPSPAARRRPSAGGGLQRPASRSLSSSATP-----LSSPARSGPSARGTP-RAPAH 268
Query: 855 PALPSPAAARSARGSWGLRASRPSRAAPRGPPNFQRCPAPRPRRRLGVSIVGPGRAHSAG 914
P+ P P GL+A RP + PP PA P L S + +A
Sbjct: 269 PSQPKPK---------GLQALRPPQVT---PPRKDAAPALGP---LSSSPLATPSPSAAL 313
Query: 915 RSSYSPKVPPVKDPKHLT 932
+S P +P LT
Sbjct: 314 QSQAPPTLPATPHSSSLT 331
Score = 30.4 bits (67), Expect = 8.0
Identities = 60/243 (24%), Positives = 76/243 (31%), Gaps = 54/243 (22%)
Query: 714 PPPCHKSPALKLPGMTTGATTQTATL---------------------PDGQTDRARP--W 750
PPP +SP+ L G + +AT PD + P W
Sbjct: 612 PPPPSRSPSSTLSGPDLAGHSSSATSTPEELRGYDSGPEGGAAASPPPDAELAACHPAAW 671
Query: 751 S-PPAPGESRDRARGAGQP-----GPGSGSGA----ERAGPERRARDTQTRTRRDKLTDS 800
S PAP + A GA P GPGS G E GPE S
Sbjct: 672 SRGPAPPLAFRGAPGAPLPWPPATGPGSADGLCTIYETEGPE-----------------S 714
Query: 801 ARGGRARLTAGRRVRRESGRRRAGATSQGAIRRAASRARKGESRRPLPANSAGRPALPSP 860
A L G G+ AGA GA R+ +AR GE S + L
Sbjct: 715 ATPAPGALDPGPSPGTSGGKAAAGA-GAGASSRSPKQARLGELPLGALQASVVQHLLSRT 773
Query: 861 AAARSARGSWGLRASRPSRAAPRGPPNFQRCPAPRPRRRLGVSIVGP---GRAHSAGRSS 917
+A G+ G P A G R ++ P RA +S
Sbjct: 774 LLLAAAEGAAGGSGGGPGGAEGGGVTGGARAALSDAELGRWAELLSPLDESRASITSVTS 833
Query: 918 YSP 920
+SP
Sbjct: 834 FSP 836
>gi|239751637 PREDICTED: hypothetical protein FLJ22184 [Homo
sapiens]
Length = 1124
Score = 48.5 bits (114), Expect = 3e-05
Identities = 72/232 (31%), Positives = 95/232 (40%), Gaps = 28/232 (12%)
Query: 719 KSPALKLPGMTTGATTQTATLPDGQTDRARPWS------PPAPGESRDRARGAG--QPG- 769
+ P + G GAT + G T A S PPA G +RA A PG
Sbjct: 55 RKPLAERAGGIGGATIPESAPRAGPTRSAGTSSRNPASRPPASGRG-ERAPPAKNTSPGP 113
Query: 770 ---PGSGSGAERAGP--ERRARDTQTRT-RRDKLTDSARGGRARLTAGRRVRRESGRRRA 823
PG SG R GP ++ R + T R K T++ + R+ L+AG RR++
Sbjct: 114 VSSPGRASGTTRPGPLGQKGLRISAEETVARGKATEAPK--RSALSAG--ARRDTSGPTP 169
Query: 824 GATSQGAIRRAASRARKGESRRPLPANSAGRPALPSPAAARSARGSWGLRASRPSRAAPR 883
G S RR SRA E P PA SA RP P+ +S + + PS AA R
Sbjct: 170 GTPSPAMARR--SRAAGTEVGLPRPAPSA-RPRPPTEGPRKSVSSASEHSTTEPSPAARR 226
Query: 884 GPP---NFQRCPAPRPRRRLGVSIVGPGRAHSAGRSS-YSPKVPPVKDPKHL 931
P QR PA R + P R+ + R + +P P PK L
Sbjct: 227 RPSAGGGLQR-PASRSLSSSATPLSSPARSGPSARGTPRAPAHPSQPKPKGL 277
Score = 39.3 bits (90), Expect = 0.017
Identities = 62/262 (23%), Positives = 93/262 (35%), Gaps = 55/262 (20%)
Query: 705 AAGEAERRHPPPCHKSPA-LKLPGMTTGAT------------TQTATLPDGQTDRARPWS 751
A+G ER PP + SP + PG +G T + T+ G+ A S
Sbjct: 96 ASGRGERA-PPAKNTSPGPVSSPGRASGTTRPGPLGQKGLRISAEETVARGKATEAPKRS 154
Query: 752 PPAPGESRDRARGA-GQPGP---------GSGSGAERAGPERRARDTQTRTRRD------ 795
+ G RD + G P P G+ G R P R R R+
Sbjct: 155 ALSAGARRDTSGPTPGTPSPAMARRSRAAGTEVGLPRPAPSARPRPPTEGPRKSVSSASE 214
Query: 796 -KLTDSARGGRARLTAGRRVRRESGRRRAGATSQGAIRRAASRARKGESRRPLPANSAGR 854
T+ + R R +AG ++R + R + + + +S AR G S R P +
Sbjct: 215 HSTTEPSPAARRRPSAGGGLQRPASRSLSSSATP-----LSSPARSGPSARGTP-RAPAH 268
Query: 855 PALPSPAAARSARGSWGLRASRPSRAAP--------RGPPNFQRCPAPRPRRRLGVSIVG 906
P+ P P GL+A RP + P GP + P P +
Sbjct: 269 PSQPKPK---------GLQALRPPQVTPPRKDAAPALGPLSSSPLATPSPSGTKARPVPP 319
Query: 907 PGRAHSAGRSSYSPKVPPVKDP 928
P A + ++ P PP+ P
Sbjct: 320 PDNAATPLPATLPPS-PPLATP 340
Score = 30.4 bits (67), Expect = 8.0
Identities = 60/243 (24%), Positives = 76/243 (31%), Gaps = 54/243 (22%)
Query: 714 PPPCHKSPALKLPGMTTGATTQTATL---------------------PDGQTDRARP--W 750
PPP +SP+ L G + +AT PD + P W
Sbjct: 881 PPPPSRSPSSTLSGPDLAGHSSSATSTPEELRGYDSGPEGGAAASPPPDAELAACHPAAW 940
Query: 751 S-PPAPGESRDRARGAGQP-----GPGSGSGA----ERAGPERRARDTQTRTRRDKLTDS 800
S PAP + A GA P GPGS G E GPE S
Sbjct: 941 SRGPAPPLAFRGAPGAPLPWPPATGPGSADGLCTIYETEGPE-----------------S 983
Query: 801 ARGGRARLTAGRRVRRESGRRRAGATSQGAIRRAASRARKGESRRPLPANSAGRPALPSP 860
A L G G+ AGA GA R+ +AR GE S + L
Sbjct: 984 ATPAPGALDPGPSPGTSGGKAAAGA-GAGASSRSPKQARLGELPLGALQASVVQHLLSRT 1042
Query: 861 AAARSARGSWGLRASRPSRAAPRGPPNFQRCPAPRPRRRLGVSIVGP---GRAHSAGRSS 917
+A G+ G P A G R ++ P RA +S
Sbjct: 1043 LLLAAAEGAAGGSGGGPGGAEGGGVTGGARAALSDAELGRWAELLSPLDESRASITSVTS 1102
Query: 918 YSP 920
+SP
Sbjct: 1103 FSP 1105
>gi|239748099 PREDICTED: hypothetical protein [Homo sapiens]
Length = 295
Score = 48.5 bits (114), Expect = 3e-05
Identities = 55/186 (29%), Positives = 66/186 (35%), Gaps = 46/186 (24%)
Query: 762 ARGAGQPGPGSGSGAERAGPERRARDTQTRTRRDKLTDSARGGRARLTAGRRVRRESGRR 821
ARG G+ G G GA RA +T + RGG +R AG R + RR
Sbjct: 107 ARGGGRGWEGGGLGARRA-----------------VTAARRGGASRPLAGEPWREAARRR 149
Query: 822 RAGATSQGAIRRAASRARKGESRRPLPANSAGR-PALPSPA--AARSARGSWGLRASRPS 878
G R + S A P A R P L + + R A G G RA P
Sbjct: 150 PQQCPQWGRARESRSAALASPRVSNAPTTPASRNPGLRAQERQSGRRAAGGGGARAEPPR 209
Query: 879 ----------------RAAPRGPPNFQRCPAPRPRRRLGVSIVGPGRAHSAGRSSYSPKV 922
RAA GP +R P PRP PG A +AG S
Sbjct: 210 VPPCRPAGCSGGNRSRRAAGAGPRTTRRKPPPRP----------PGTAPAAGLRSVHLLR 259
Query: 923 PPVKDP 928
P K+P
Sbjct: 260 IPYKEP 265
>gi|239746609 PREDICTED: hypothetical protein XP_002343799 [Homo
sapiens]
Length = 245
Score = 48.5 bits (114), Expect = 3e-05
Identities = 51/169 (30%), Positives = 68/169 (40%), Gaps = 17/169 (10%)
Query: 746 RARPWSPPAPGESRDRARGAGQPGPGSGSGAERAGPERRARDTQTRTRRDKLTDSARGGR 805
R + S G R R G+ Q PG + A P R D R RR L+ S
Sbjct: 28 REKDGSASLEGARRQRRVGSRQRTPGPDG--QDASPRAREEDGG-RERRGGLSHSKDCNA 84
Query: 806 ARLTAGRRVRRESGRRRAGATSQGAIRRAASRARK----GESRRPLPANSAGRPALPSPA 861
AR G+ +RR RR G + R R R+ ++ +PA RP P P
Sbjct: 85 ARNARGKHLRRTRRRRTLGRRCRPPAPRPRPRPRRKLALDQAATRIPA---ARPRPPGPG 141
Query: 862 AARSARGS-WGLRASRPSRAAPRGPPNFQRCPAPRPRRRLGVSIVGPGR 909
RGS W ++ + PR P+ Q P P RRR ++G GR
Sbjct: 142 G----RGSHWKIQPG--VQRLPRPTPSAQPRPGPPERRRASRPLIGCGR 184
>gi|42542379 serine/arginine repetitive matrix 1 [Homo sapiens]
Length = 904
Score = 48.5 bits (114), Expect = 3e-05
Identities = 68/276 (24%), Positives = 96/276 (34%), Gaps = 34/276 (12%)
Query: 659 ATKQRHQPSEQPSRMRMRVCLCLCLSMHAQAERGLRADHRAICNEDAAGEAERRHPPPCH 718
+++++ + S P R + R S + ER + H + P
Sbjct: 161 SSREKRERSRSPRRRKSRSPSPRRRSSPVRRER--KRSHSRSPRHRTKSRSPSPAPEKKE 218
Query: 719 KSPALKLPGMTTGA-TTQTATLPDGQTDRARPWSPPAPGESRDRARGAGQPGPGSGSGAE 777
K+P L P + + Q AT +P P P E P P S E
Sbjct: 219 KTPELPEPSVKVKEPSVQEATSTSDILKVPKPEPIPEPKE----------PSPEKNSKKE 268
Query: 778 RAGPERRARD-------TQTRTRRDKLTDSARGGRARLTAGRRVRRESGRRRAGATSQGA 830
+ + R R ++TR+R T R R+R + RR S RRR +
Sbjct: 269 KEKEKTRPRSRSRSKSRSRTRSRSPSHTRPRRRHRSRSRSYSPRRRPSPRRRPSPRRRTP 328
Query: 831 IRRAASRARKGESRRPLPANSAGRPALPSPAAARSARGSWGLRASRPSRAAPRGPPNFQR 890
RR R SR P+ ++ S GS +S SR+ P+ PP
Sbjct: 329 PRRMPPPPRHRRSRSPVRRRR---------RSSASLSGSSSSSSSSRSRSPPKKPPKRTS 379
Query: 891 CPAPRPRRRLGVSIVGPGRAHSAGRSSYSPKVPPVK 926
P PR RRL S P R H P PP K
Sbjct: 380 SP-PRKTRRLSPSASPPRRRHRPS----PPATPPPK 410
Score = 41.2 bits (95), Expect = 0.005
Identities = 68/300 (22%), Positives = 101/300 (33%), Gaps = 57/300 (19%)
Query: 651 PENTALTPATKQRHQPSEQPSRMRMRVCLCLCLSMHAQAERGLRADHRAICNEDAAGEAE 710
P+ T+ P +R PS P R R R + A +
Sbjct: 375 PKRTSSPPRKTRRLSPSASPPRRRHRP------------------------SPPATPPPK 410
Query: 711 RRHPPP------CHKSPALKLPGMTTGATTQTATLPDGQTDRARPWSPPAPGESRDRARG 764
RH P KS PG T+G T+ G R P P P +
Sbjct: 411 TRHSPTPQQSNRTRKSRVSVSPGRTSGKVTKHK----GTEKRESPSPAPKPRKVELSESE 466
Query: 765 AGQPGPGSGSGAERAGPERRARDTQT-------------RTRRDKLTDSARGGRARLTAG 811
+ G + + + + + R ++ Q+ R +R + + G R R +
Sbjct: 467 EDKGGKMAAADSVQQRRQYRRQNQQSSSDSGSSSSSEDERPKRSHVKNGEVGRRRRHSPS 526
Query: 812 RRVRRESGRRRAGATSQGAIRRAASRARKGESRRPLPANSAGRPALPSPAAARSARGSWG 871
R +R+ + +G RR+ S R P PA R P+P R
Sbjct: 527 RSASPSPRKRQKETSPRGRRRRSPSPPPTRRRRSPSPAPPPRRRRTPTPPPRRRTPSPPP 586
Query: 872 LRAS-RPSRAAPRGPPNFQRCPAPRPRRRLGVSIVGPGRAHSAGRSSYSPKVPPVKDPKH 930
R S P R +P P + P+P P+RR P R R+S SP PP + H
Sbjct: 587 RRRSPSPRRYSP--PIQRRYSPSPPPKRRTASPPPPPKR-----RASPSP--PPKRRVSH 637
Score = 40.0 bits (92), Expect = 0.010
Identities = 92/392 (23%), Positives = 135/392 (34%), Gaps = 52/392 (13%)
Query: 543 PQRQHSLPRPTSPLASTVQPDGDMVYPSPRCLPDSPQQGCEGQWIPEASLFQNNRSSLSG 602
P+R S PR T L+ + P PSP P P + +++ + +R S+S
Sbjct: 375 PKRTSSPPRKTRRLSPSASPPRRRHRPSPPATP--PPKTRHSPTPQQSNRTRKSRVSVSP 432
Query: 603 GRW-GFNTPLPGWGFHSVTMDCTLAVGQTQALDSASLCKSWRDTLWMQYPENTALTPATK 661
GR G T G T+ +S S R + E+ A
Sbjct: 433 GRTSGKVTKHKG----------------TEKRESPSPAPKPRKVELSESEEDKGGKMAAA 476
Query: 662 QRHQPSEQPSRMRMRVCLCLCLSMHAQAERGLRADHRAICNEDAAGEAERRHPPPCHKSP 721
Q Q R + S ++ ER R+ + N + RRH P SP
Sbjct: 477 DSVQQRRQYRRQNQQSSSDSGSSSSSEDERPKRSH---VKNGEVG--RRRRHSPSRSASP 531
Query: 722 ALKLPGMTTGATTQTATLPDGQTDRARPWSPPAPGESRDRARGAGQPGPGSGSGAERAGP 781
+ + Q T P G+ R+ P PP R R + P P P
Sbjct: 532 SPR--------KRQKETSPRGRRRRS-PSPPPT------RRRRSPSPAPPPRRRRTPTPP 576
Query: 782 ERRARDTQTRTRRDKLTDSARGGRARLTAGRRVRRESGRRRAGATSQGAIRRAASRA--- 838
RR + RR S R RR +R A+ +R AS +
Sbjct: 577 PRRRTPSPPPRRR-----SPSPRRYSPPIQRRYSPSPPPKRRTASPPPPPKRRASPSPPP 631
Query: 839 RKGESRRPLPANSAGRPALPSPAAARSARGSWGLRASRPSRAAPRGPPNFQRCPAPRPRR 898
++ S P P P + + S++ G SR +R A PN + P+PRPR
Sbjct: 632 KRRVSHSP-PPKQRSSPVTKRRSPSLSSKHRKGSSPSRSTREARSPQPNKRHSPSPRPRA 690
Query: 899 RLGVSIVGPGRAHSAG----RSSYSPKVPPVK 926
S P R ++ R S SP P++
Sbjct: 691 PQTSSSPPPVRRGASSSPQRRQSPSPSTRPIR 722
Score = 33.5 bits (75), Expect = 0.95
Identities = 27/121 (22%), Positives = 44/121 (36%), Gaps = 13/121 (10%)
Query: 779 AGPERRARDTQTRTRRDKLTDSARGGRARLTAGRRVRRESGRRRAGATSQGAIR---RAA 835
A +++ D R + +K + + R+R R+ R S RRR+ + R R+
Sbjct: 142 ASMKKQDEDKDKRDKEEKESSREKRERSRSPRRRKSRSPSPRRRSSPVRRERKRSHSRSP 201
Query: 836 SRARKGESRRPLPANSAGRPALPSPAAARSARGSWGLRASRPSRAAPRGPPNFQRCPAPR 895
K S P P P LP P+ ++ PS + + P P
Sbjct: 202 RHRTKSRSPSPAPEKKEKTPELPEPS----------VKVKEPSVQEATSTSDILKVPKPE 251
Query: 896 P 896
P
Sbjct: 252 P 252
>gi|169210256 PREDICTED: hypothetical protein [Homo sapiens]
Length = 447
Score = 48.1 bits (113), Expect = 4e-05
Identities = 58/192 (30%), Positives = 65/192 (33%), Gaps = 59/192 (30%)
Query: 742 GQTDRARPWSP------------PAPGESRDRARGAGQPGPGSGSGAERAGPERRARDTQ 789
G RA+P P P P +R AG G GSG+ E A P
Sbjct: 249 GSGARAQPGGPCWAQGPPGRLPDPIPLPTRAPRTSAGLAGVGSGAPGEPAEP-------- 300
Query: 790 TRTRRDKLTDSARGGRARLTAGRRVRRESGRRRAGATSQGAIRRAASRARKGESRRPLPA 849
GRAR RE + + RR SRAR G
Sbjct: 301 --------------GRARAPRSAPSSREPRQTK---------RRVGSRARAG-------- 329
Query: 850 NSAGRPALPSPAAARSARGSWGLRASRPSRAAPRGPPNFQRCPAPRPRRRLGVSIVGPGR 909
AG P PAAA+ ARGSW PS R P AP PRR G P
Sbjct: 330 --AGAVTGPCPAAAQGARGSWPSPRCLPSDGGAREAP---PTSAPHPRRPAGSP---PAL 381
Query: 910 AHSAGRSSYSPK 921
A GR S P+
Sbjct: 382 ADREGRRSLVPQ 393
>gi|61966741 TMF regulated nuclear protein [Homo sapiens]
Length = 227
Score = 48.1 bits (113), Expect = 4e-05
Identities = 69/212 (32%), Positives = 83/212 (39%), Gaps = 28/212 (13%)
Query: 707 GEAERRHPPPCHKSPALKLPGMTTGATTQTAT------LPDGQTDRARPWSPPAPGESRD 760
G AE+R PPP P T T T T LPD A R
Sbjct: 16 GTAEQRSPPPPRDPMPSSQPPPPTPTLTPTPTPGQSPPLPDAAGASAGAAEDQELQRWRQ 75
Query: 761 RARG-AGQPGPGSGSGA---------ERAGPERRARDTQTRTRRDKLTDS--ARGGRARL 808
A G AG GPG GSGA E A RR + + R R +S + R L
Sbjct: 76 GASGIAGLAGPGGGSGAAAGAGGRALELAEARRRLLEVEGRRRLVSELESRVLQLHRVFL 135
Query: 809 TAGRRV--RRESGRRRAGATSQGAIRRAA--SRARKGESR----RP--LPANSAGRPALP 858
A R+ R ES R +G +Q + AA SR +KG R RP L A++ G
Sbjct: 136 AAELRLAHRAESLSRLSGGVAQAELYLAAHGSRLKKGPRRGRRGRPPALLASALGLGGCV 195
Query: 859 SPAAARSARGSWGLRASRPSRAAPRGPPNFQR 890
A R RG S R+ PRGP + QR
Sbjct: 196 PWGAGRLRRGHGPEPDSPFRRSPPRGPASPQR 227
>gi|239754081 PREDICTED: hypothetical protein XP_002345876 [Homo
sapiens]
Length = 355
Score = 47.8 bits (112), Expect = 5e-05
Identities = 74/278 (26%), Positives = 103/278 (37%), Gaps = 38/278 (13%)
Query: 651 PENTALTPATKQRHQPSEQP-SRMRMRVCLCLCLSMHAQAERGLRADHRAICNEDAAGEA 709
P + TP HQP P S R+ + + A RG + A AG
Sbjct: 77 PAHPWTTPQPGPPHQPGFNPASSPRLPLPADSEPDAYTSAPRGSGPTYCAGAGNSRAGGG 136
Query: 710 ERRHPPPCHKS--PALKLPGMTTGATTQTATLPDGQTDRARPWSPPAPGESRDRARGAGQ 767
++ S P +LP GA+ P+ + R A +R +
Sbjct: 137 LTKYNSAHSSSRVPRPRLPSQRRGASCGLGPGPESRAARQGLGGRSARARTRRGPHRTRR 196
Query: 768 PGPGSG-SGAERAGPERRARDTQTRTRRDKLTDSARGGRARLTAGRRVRRESGRRRAGAT 826
P PG +GA +AGP T+ RTR +ARG L R G+
Sbjct: 197 PEPGPHHTGARQAGP---LPGTRGRTRAAGTGSAARGPARHL-------------RGGSV 240
Query: 827 SQGAIRRAASRARKGESRRPLPANSAGRPALP--------SPAAARSARGSWGLRASRP- 877
+ A R + G SR P +S RP L SP+A R R +W ++SRP
Sbjct: 241 AAAAAARCLGLSPPGRSRLFSPRSSLARPPLRFPPARPALSPSARRRCRVNWN-QSSRPA 299
Query: 878 ---SRAAPRGPPNFQRCPAPRPR--RRLGVSIVGPGRA 910
++ A R P+ R R R RR G+ PG A
Sbjct: 300 SHNAQRAARHIPSRPRASGLRARAARRPGLD---PGPA 334
>gi|239748667 PREDICTED: hypothetical protein XP_002346761 [Homo
sapiens]
Length = 355
Score = 47.8 bits (112), Expect = 5e-05
Identities = 74/278 (26%), Positives = 103/278 (37%), Gaps = 38/278 (13%)
Query: 651 PENTALTPATKQRHQPSEQP-SRMRMRVCLCLCLSMHAQAERGLRADHRAICNEDAAGEA 709
P + TP HQP P S R+ + + A RG + A AG
Sbjct: 77 PAHPWTTPQPGPPHQPGFNPASSPRLPLPADSEPDAYTSAPRGSGPTYCAGAGNSRAGGG 136
Query: 710 ERRHPPPCHKS--PALKLPGMTTGATTQTATLPDGQTDRARPWSPPAPGESRDRARGAGQ 767
++ S P +LP GA+ P+ + R A +R +
Sbjct: 137 LTKYNSAHSSSRVPRPRLPSQRRGASCGLGPGPESRAARQGLGGRSARARTRRGPHRTRR 196
Query: 768 PGPGSG-SGAERAGPERRARDTQTRTRRDKLTDSARGGRARLTAGRRVRRESGRRRAGAT 826
P PG +GA +AGP T+ RTR +ARG L R G+
Sbjct: 197 PEPGPHHTGARQAGP---LPGTRGRTRAAGTGSAARGPARHL-------------RGGSV 240
Query: 827 SQGAIRRAASRARKGESRRPLPANSAGRPALP--------SPAAARSARGSWGLRASRP- 877
+ A R + G SR P +S RP L SP+A R R +W ++SRP
Sbjct: 241 AAAAAARCLGLSPPGRSRLFSPRSSLARPPLRFPPARPALSPSARRRCRVNWN-QSSRPA 299
Query: 878 ---SRAAPRGPPNFQRCPAPRPR--RRLGVSIVGPGRA 910
++ A R P+ R R R RR G+ PG A
Sbjct: 300 SHNAQRAARHIPSRPRASGLRARAARRPGLD---PGPA 334
>gi|239742692 PREDICTED: hypothetical protein XP_002342583 [Homo
sapiens]
Length = 355
Score = 47.8 bits (112), Expect = 5e-05
Identities = 74/278 (26%), Positives = 103/278 (37%), Gaps = 38/278 (13%)
Query: 651 PENTALTPATKQRHQPSEQP-SRMRMRVCLCLCLSMHAQAERGLRADHRAICNEDAAGEA 709
P + TP HQP P S R+ + + A RG + A AG
Sbjct: 77 PAHPWTTPQPGPPHQPGFNPASSPRLPLPADSEPDAYTSAPRGSGPTYCAGAGNSRAGGG 136
Query: 710 ERRHPPPCHKS--PALKLPGMTTGATTQTATLPDGQTDRARPWSPPAPGESRDRARGAGQ 767
++ S P +LP GA+ P+ + R A +R +
Sbjct: 137 LTKYNSAHSSSRVPRPRLPSQRRGASCGLGPGPESRAARQGLGGRSARARTRRGPHRTRR 196
Query: 768 PGPGSG-SGAERAGPERRARDTQTRTRRDKLTDSARGGRARLTAGRRVRRESGRRRAGAT 826
P PG +GA +AGP T+ RTR +ARG L R G+
Sbjct: 197 PEPGPHHTGARQAGP---LPGTRGRTRAAGTGSAARGPARHL-------------RGGSV 240
Query: 827 SQGAIRRAASRARKGESRRPLPANSAGRPALP--------SPAAARSARGSWGLRASRP- 877
+ A R + G SR P +S RP L SP+A R R +W ++SRP
Sbjct: 241 AAAAAARCLGLSPPGRSRLFSPRSSLARPPLRFPPARPALSPSARRRCRVNWN-QSSRPA 299
Query: 878 ---SRAAPRGPPNFQRCPAPRPR--RRLGVSIVGPGRA 910
++ A R P+ R R R RR G+ PG A
Sbjct: 300 SHNAQRAARHIPSRPRASGLRARAARRPGLD---PGPA 334
>gi|239754489 PREDICTED: hypothetical protein [Homo sapiens]
Length = 228
Score = 47.0 bits (110), Expect = 8e-05
Identities = 52/159 (32%), Positives = 60/159 (37%), Gaps = 33/159 (20%)
Query: 751 SPPAPGESRDRARGAGQPGPGSGS-GAERAGPERRARDTQ-----------------TRT 792
SP P E + A PG G G GA+ RRA+ Q +
Sbjct: 65 SPDTPEEPPEEPAPAIAPGGGGGGCGAQHWAAGRRAQREQGAGAAVLADFGHVRAAPSGL 124
Query: 793 RRDKLTDSARGGRARLTAGRRVRRESGRRRAGATSQGAIRRAASRARKGESRRPLPAN-- 850
RR +L RGGR AGR R+ G RAGA RA AR P+P +
Sbjct: 125 RRRRL-QRRRGGRGGRGAGRA--RKPGPDRAGAERSLPAHRAPRLARP-----PVPPSVA 176
Query: 851 -----SAGRPALPSPAAARSARGSWGLRASRPSRAAPRG 884
SAG A P P R SW R S P R A G
Sbjct: 177 HVARASAGLGARPVPGGPAGPRESWARRTSSPPRGAAGG 215
>gi|239744552 PREDICTED: hypothetical protein [Homo sapiens]
Length = 221
Score = 47.0 bits (110), Expect = 8e-05
Identities = 53/184 (28%), Positives = 72/184 (39%), Gaps = 30/184 (16%)
Query: 755 PGESRDRARGAGQPGPGSGSGAERAGPERRARDTQTRTR-----RDKLTDSARGGRARLT 809
PG + +G + G +G G GP R R Q R R R++ + ARG RA
Sbjct: 23 PGWGGEEVQGLARAGLATGKGQRPPGP-GRVRAAQARARRGGGARERPAEGARGPRAARG 81
Query: 810 AGRRVRRESGRRRAGATSQGAIRRAASRARKGESRRPLPANSAGRP--ALPSPAAARSAR 867
R S R ++ A+RR +S A + ++ P + S GR A+ SP+ + A
Sbjct: 82 GARAAPMPSSAPR--GPTEPALRRPSS-AERPLAQAPSSSASVGRAPGAMASPSRSSEAT 138
Query: 868 GSWGLRASRPSRAAPRGPPNFQRC------------------PAPRPRR-RLGVSIVGPG 908
G R RP R PP +R APRP R G G G
Sbjct: 139 GKPRGRDGRPRREEDDVPPEEKRLRLLLEGGSAQPQDGEDGEDAPRPGRVETGTQTGGDG 198
Query: 909 RAHS 912
R S
Sbjct: 199 RGVS 202
Score = 41.6 bits (96), Expect = 0.003
Identities = 46/130 (35%), Positives = 58/130 (44%), Gaps = 26/130 (20%)
Query: 805 RARLTAGRRVRRESGRRRAGATSQGAIRRAASRARKGESRRPLPANSAGRPALPSPAAAR 864
RA L G+ G+R G G +R A +RAR+G R PA A P R
Sbjct: 35 RAGLATGK------GQRPPGP---GRVRAAQARARRGGGARERPAEGARGP--------R 77
Query: 865 SARGSWGLRASRPSRAAPRGP--PNFQR-CPAPRPRRRLGVSIVGPGRAHSA----GRSS 917
+ARG G RA+ +APRGP P +R A RP + S GRA A RSS
Sbjct: 78 AARG--GARAAPMPSSAPRGPTEPALRRPSSAERPLAQAPSSSASVGRAPGAMASPSRSS 135
Query: 918 YSPKVPPVKD 927
+ P +D
Sbjct: 136 EATGKPRGRD 145
>gi|27436957 membrane associated guanylate kinase, WW and PDZ domain
containing 2 [Homo sapiens]
Length = 1455
Score = 46.6 bits (109), Expect = 1e-04
Identities = 70/254 (27%), Positives = 96/254 (37%), Gaps = 29/254 (11%)
Query: 686 HAQAERGLRADHRAI--CNEDAAGEAERRHPPPCHKSPALKLPGMT-TGATTQTATLPDG 742
HA+A +++ R + + G+ P SPA PG+ G + P
Sbjct: 1207 HARAIELIKSGGRRVRLLLKRGTGQVPEYDEPAPWSSPAAAAPGLPEVGVSLDDGLAPFS 1266
Query: 743 QTDRARPWSPP---APGESRDRARGAGQPGP----GSGSGAERAGPERRARDTQTRTRRD 795
+ A P P +PG + D R P G +R G +R + R R
Sbjct: 1267 PSHPAPPSDPSHQISPGPTWDIKREHDVRKPKELSACGQKKQRLGEQRERSASPQRAARP 1326
Query: 796 KLTDSARGGRARLTAGRRVRRESGRRRAGATSQGAIR---RAASRARKGES--RRPLPAN 850
+L + A GG+ R AGR A A + A R + A RA G RR P
Sbjct: 1327 RL-EEAPGGQGRPEAGRPASEARAPGLAAADAADAARAGGKEAPRAAAGSELCRREGP-- 1383
Query: 851 SAGRPALPSP----AAARSARGSWGLRAS-RPSRAAPRGPPNFQRCPAPRPRRRLG---- 901
PA P + A A G G RA RP P G P + AP P + G
Sbjct: 1384 -GAAPAFAGPGGGGSGALEAEGRAGARAGPRPGPRPPGGAPARKAAVAPGPWKVPGSDKL 1442
Query: 902 VSIVGPGRAHSAGR 915
S++ PG A +A R
Sbjct: 1443 PSVLKPG-ASAASR 1455
>gi|169210481 PREDICTED: hypothetical protein [Homo sapiens]
Length = 143
Score = 46.2 bits (108), Expect = 1e-04
Identities = 36/89 (40%), Positives = 40/89 (44%), Gaps = 8/89 (8%)
Query: 833 RAASRARKGESRRPLPANSAGRPALPSPAAARSARGSWGLRASRPSRAAPRGPPNFQRCP 892
R ASRAR+G + P AG P PAAA+ ARGSW PS R P
Sbjct: 9 RRASRARRGLA--PWDGAGAGAVTGPCPAAAQGARGSWPSPRCLPSDGGAREAP---PTS 63
Query: 893 APRPRRRLGVSIVGPGRAHSAGRSSYSPK 921
AP PRR G P A GR S P+
Sbjct: 64 APHPRRPAGSP---PALADREGRRSLVPQ 89
>gi|169210045 PREDICTED: hypothetical protein [Homo sapiens]
Length = 143
Score = 46.2 bits (108), Expect = 1e-04
Identities = 36/89 (40%), Positives = 40/89 (44%), Gaps = 8/89 (8%)
Query: 833 RAASRARKGESRRPLPANSAGRPALPSPAAARSARGSWGLRASRPSRAAPRGPPNFQRCP 892
R ASRAR+G + P AG P PAAA+ ARGSW PS R P
Sbjct: 9 RRASRARRGLA--PWDGAGAGAVTGPCPAAAQGARGSWPSPRCLPSDGGAREAP---PTS 63
Query: 893 APRPRRRLGVSIVGPGRAHSAGRSSYSPK 921
AP PRR G P A GR S P+
Sbjct: 64 APHPRRPAGSP---PALADREGRRSLVPQ 89
>gi|51094101 DEAD (Asp-Glu-Ala-Asp) box polypeptide 54 isoform 2
[Homo sapiens]
Length = 881
Score = 46.2 bits (108), Expect = 1e-04
Identities = 36/106 (33%), Positives = 52/106 (49%), Gaps = 12/106 (11%)
Query: 741 DGQTDRARPWSPPAPGESRDRARGAGQP-GPGSGSGAERAGPERRARDTQTRTRRDKLTD 799
+G +DR P G RDR +GA +P PG+ +G R + + + + R R KL
Sbjct: 785 EGASDRR---GPERRGGKRDRGQGASRPHAPGTPAGRVRPELKTKQQILKQRRRAQKLHF 841
Query: 800 SARGGRARLTAGRRVRRESGRRRAGATSQGAIRRAASRARKGESRR 845
RGG +L+A RRR QGA R A R++KG+ R+
Sbjct: 842 LQRGGLKQLSA-------RNRRRVQELQQGAFGRGA-RSKKGKMRK 879
>gi|239741995 PREDICTED: hypothetical protein XP_002342368 [Homo
sapiens]
Length = 224
Score = 45.4 bits (106), Expect = 2e-04
Identities = 52/167 (31%), Positives = 64/167 (38%), Gaps = 31/167 (18%)
Query: 762 ARGAGQPGPGSGSGAERAGPERRARDTQTRTRRDKLTDSARGGRARLTAGRRVRRESGRR 821
ARG G+ G G GA RA T RR + AR R+ A RV
Sbjct: 59 ARGGGRGWEGGGLGARRA---------VTAARRGEW-GRARESRSAALASPRV------- 101
Query: 822 RAGATSQGAIRRAASRARKGESRRPLPANSAGRPALPSPAAARSARGSWGLRASRPSRAA 881
+ A + A R RA++ +S R R P R A S G +R RAA
Sbjct: 102 -SNAPTTPASRNPGLRAQERQSGRRAAGGGGARAEPPRVPPCRPAGCSGG---NRSRRAA 157
Query: 882 PRGPPNFQRCPAPRPRRRLGVSIVGPGRAHSAGRSSYSPKVPPVKDP 928
GP +R P PRP PG A +AG S P K+P
Sbjct: 158 GAGPRTTRRKPPPRP----------PGTAPAAGLRSVHLLRIPYKEP 194
Database: hs.faa
Posted date: Aug 4, 2009 4:42 PM
Number of letters in database: 18,247,518
Number of sequences in database: 37,866
Lambda K H
0.317 0.133 0.418
Gapped
Lambda K H
0.267 0.0410 0.140
Matrix: BLOSUM62
Gap Penalties: Existence: 11, Extension: 1
Number of Hits to DB: 44,286,475
Number of Sequences: 37866
Number of extensions: 2543404
Number of successful extensions: 16547
Number of sequences better than 10.0: 30
Number of HSP's better than 10.0 without gapping: 85
Number of HSP's successfully gapped in prelim test: 824
Number of HSP's that attempted gapping in prelim test: 13934
Number of HSP's gapped (non-prelim): 3052
length of query: 935
length of database: 18,247,518
effective HSP length: 112
effective length of query: 823
effective length of database: 14,006,526
effective search space: 11527370898
effective search space used: 11527370898
T: 11
A: 40
X1: 16 ( 7.3 bits)
X2: 38 (14.6 bits)
X3: 64 (24.7 bits)
S1: 41 (21.7 bits)
S2: 67 (30.4 bits)
Search results were obtained with NCBI BLAST and RefSeq entries.
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Guide to the Human Genome
Copyright © 2010 by Stewart Scherer. All rights reserved.