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Search of human proteins with 239752162
BLASTP 2.2.11 [Jun-05-2005]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= gi|239752162 PREDICTED: similar to hCG40360 [Homo sapiens]
(131 letters)
Database: hs.faa
37,866 sequences; 18,247,518 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
gi|239752162 PREDICTED: similar to hCG40360 [Homo sapiens] 285 7e-78
gi|219521907 carboxylesterase 7 isoform 1 [Homo sapiens] 172 9e-44
gi|21450749 carboxylesterase 7 isoform 2 [Homo sapiens] 172 9e-44
gi|169216018 PREDICTED: similar to hCG40360 [Homo sapiens] 164 2e-41
gi|169215613 PREDICTED: similar to hCG40360 [Homo sapiens] 164 2e-41
gi|37622887 carboxylesterase 2 isoform 2 [Homo sapiens] 115 7e-27
gi|37622885 carboxylesterase 2 isoform 1 [Homo sapiens] 115 7e-27
gi|115529439 carboxylesterase 8 (putative) [Homo sapiens] 113 4e-26
gi|33563374 carboxylesterase 3 [Homo sapiens] 111 1e-25
gi|68508967 carboxylesterase 1 isoform a precursor [Homo sapiens] 111 2e-25
gi|68508965 carboxylesterase 1 isoform b precursor [Homo sapiens] 111 2e-25
gi|68508957 carboxylesterase 1 isoform c precursor [Homo sapiens] 111 2e-25
gi|7662470 neuroligin 1 [Homo sapiens] 93 5e-20
gi|30840978 neuroligin 2 [Homo sapiens] 93 5e-20
gi|31317256 X-linked neuroligin 4 [Homo sapiens] 92 1e-19
gi|24308209 X-linked neuroligin 4 [Homo sapiens] 92 1e-19
gi|51593088 neuroligin 3 [Homo sapiens] 92 1e-19
gi|40538788 neuroligin 4, Y-linked [Homo sapiens] 89 1e-18
gi|4557351 butyrylcholinesterase precursor [Homo sapiens] 84 3e-17
gi|4557239 acetylcholinesterase isoform E4-E6 precursor [Homo sa... 82 9e-17
gi|7710112 acetylcholinesterase isoform E4-E5 precursor [Homo sa... 82 9e-17
gi|148536848 carboxyl ester lipase precursor [Homo sapiens] 82 9e-17
gi|55770862 thyroglobulin [Homo sapiens] 73 6e-14
gi|61966717 arylacetamide deacetylase-like 4 [Homo sapiens] 32 0.11
gi|169173226 PREDICTED: hypothetical protein [Homo sapiens] 28 2.7
gi|169172450 PREDICTED: hypothetical protein [Homo sapiens] 28 2.7
gi|169172722 PREDICTED: hypothetical protein [Homo sapiens] 28 2.7
gi|40805858 isthmin 2 homolog isoform 1 [Homo sapiens] 27 3.5
gi|145580590 hepatitis C virus F protein-binding protein 2 [Homo... 26 7.8
>gi|239752162 PREDICTED: similar to hCG40360 [Homo sapiens]
Length = 131
Score = 285 bits (729), Expect = 7e-78
Identities = 131/131 (100%), Positives = 131/131 (100%)
Query: 1 MGRGGGAWWADGTFLSPPRVLLWFPGGAFETGSASIFDGSSLAAYEDMLVVIVQYRLGIF 60
MGRGGGAWWADGTFLSPPRVLLWFPGGAFETGSASIFDGSSLAAYEDMLVVIVQYRLGIF
Sbjct: 1 MGRGGGAWWADGTFLSPPRVLLWFPGGAFETGSASIFDGSSLAAYEDMLVVIVQYRLGIF 60
Query: 61 GFFTTWDQHAPGNWAFKDQVAALSWVQKNIEFFGGDPSSVTIFDAVSHGRRLIPQSRHGE 120
GFFTTWDQHAPGNWAFKDQVAALSWVQKNIEFFGGDPSSVTIFDAVSHGRRLIPQSRHGE
Sbjct: 61 GFFTTWDQHAPGNWAFKDQVAALSWVQKNIEFFGGDPSSVTIFDAVSHGRRLIPQSRHGE 120
Query: 121 WGGHHPLPEGP 131
WGGHHPLPEGP
Sbjct: 121 WGGHHPLPEGP 131
>gi|219521907 carboxylesterase 7 isoform 1 [Homo sapiens]
Length = 575
Score = 172 bits (435), Expect = 9e-44
Identities = 79/84 (94%), Positives = 84/84 (100%)
Query: 20 VLLWFPGGAFETGSASIFDGSSLAAYEDMLVVIVQYRLGIFGFFTTWDQHAPGNWAFKDQ 79
VL+WFPGGAF+TGSASIFDGS+LAAYED+LVV+VQYRLGIFGFFTTWDQHAPGNWAFKDQ
Sbjct: 140 VLVWFPGGAFKTGSASIFDGSALAAYEDVLVVVVQYRLGIFGFFTTWDQHAPGNWAFKDQ 199
Query: 80 VAALSWVQKNIEFFGGDPSSVTIF 103
VAALSWVQKNIEFFGGDPSSVTIF
Sbjct: 200 VAALSWVQKNIEFFGGDPSSVTIF 223
>gi|21450749 carboxylesterase 7 isoform 2 [Homo sapiens]
Length = 525
Score = 172 bits (435), Expect = 9e-44
Identities = 79/84 (94%), Positives = 84/84 (100%)
Query: 20 VLLWFPGGAFETGSASIFDGSSLAAYEDMLVVIVQYRLGIFGFFTTWDQHAPGNWAFKDQ 79
VL+WFPGGAF+TGSASIFDGS+LAAYED+LVV+VQYRLGIFGFFTTWDQHAPGNWAFKDQ
Sbjct: 140 VLVWFPGGAFKTGSASIFDGSALAAYEDVLVVVVQYRLGIFGFFTTWDQHAPGNWAFKDQ 199
Query: 80 VAALSWVQKNIEFFGGDPSSVTIF 103
VAALSWVQKNIEFFGGDPSSVTIF
Sbjct: 200 VAALSWVQKNIEFFGGDPSSVTIF 223
>gi|169216018 PREDICTED: similar to hCG40360 [Homo sapiens]
Length = 327
Score = 164 bits (414), Expect = 2e-41
Identities = 78/78 (100%), Positives = 78/78 (100%)
Query: 26 GGAFETGSASIFDGSSLAAYEDMLVVIVQYRLGIFGFFTTWDQHAPGNWAFKDQVAALSW 85
GGAFETGSASIFDGSSLAAYEDMLVVIVQYRLGIFGFFTTWDQHAPGNWAFKDQVAALSW
Sbjct: 20 GGAFETGSASIFDGSSLAAYEDMLVVIVQYRLGIFGFFTTWDQHAPGNWAFKDQVAALSW 79
Query: 86 VQKNIEFFGGDPSSVTIF 103
VQKNIEFFGGDPSSVTIF
Sbjct: 80 VQKNIEFFGGDPSSVTIF 97
>gi|169215613 PREDICTED: similar to hCG40360 [Homo sapiens]
Length = 327
Score = 164 bits (414), Expect = 2e-41
Identities = 78/78 (100%), Positives = 78/78 (100%)
Query: 26 GGAFETGSASIFDGSSLAAYEDMLVVIVQYRLGIFGFFTTWDQHAPGNWAFKDQVAALSW 85
GGAFETGSASIFDGSSLAAYEDMLVVIVQYRLGIFGFFTTWDQHAPGNWAFKDQVAALSW
Sbjct: 20 GGAFETGSASIFDGSSLAAYEDMLVVIVQYRLGIFGFFTTWDQHAPGNWAFKDQVAALSW 79
Query: 86 VQKNIEFFGGDPSSVTIF 103
VQKNIEFFGGDPSSVTIF
Sbjct: 80 VQKNIEFFGGDPSSVTIF 97
>gi|37622887 carboxylesterase 2 isoform 2 [Homo sapiens]
Length = 607
Score = 115 bits (289), Expect = 7e-27
Identities = 53/90 (58%), Positives = 68/90 (75%)
Query: 20 VLLWFPGGAFETGSASIFDGSSLAAYEDMLVVIVQYRLGIFGFFTTWDQHAPGNWAFKDQ 79
V++W GGA G AS++DGS LAA E+++VVI+QYRLG+ GFF+T D+HA GNW + DQ
Sbjct: 206 VMVWIHGGALVFGMASLYDGSMLAALENVVVVIIQYRLGVLGFFSTGDKHATGNWGYLDQ 265
Query: 80 VAALSWVQKNIEFFGGDPSSVTIFDAVSHG 109
VAAL WVQ+NI FGG+P VTIF + G
Sbjct: 266 VAALRWVQQNIAHFGGNPDRVTIFGESAGG 295
>gi|37622885 carboxylesterase 2 isoform 1 [Homo sapiens]
Length = 623
Score = 115 bits (289), Expect = 7e-27
Identities = 53/90 (58%), Positives = 68/90 (75%)
Query: 20 VLLWFPGGAFETGSASIFDGSSLAAYEDMLVVIVQYRLGIFGFFTTWDQHAPGNWAFKDQ 79
V++W GGA G AS++DGS LAA E+++VVI+QYRLG+ GFF+T D+HA GNW + DQ
Sbjct: 206 VMVWIHGGALVFGMASLYDGSMLAALENVVVVIIQYRLGVLGFFSTGDKHATGNWGYLDQ 265
Query: 80 VAALSWVQKNIEFFGGDPSSVTIFDAVSHG 109
VAAL WVQ+NI FGG+P VTIF + G
Sbjct: 266 VAALRWVQQNIAHFGGNPDRVTIFGESAGG 295
>gi|115529439 carboxylesterase 8 (putative) [Homo sapiens]
Length = 491
Score = 113 bits (283), Expect = 4e-26
Identities = 51/84 (60%), Positives = 66/84 (78%)
Query: 20 VLLWFPGGAFETGSASIFDGSSLAAYEDMLVVIVQYRLGIFGFFTTWDQHAPGNWAFKDQ 79
V++WFPGGAF G+AS ++GS LAA E +++V +Q+RLGIFGF +T D HA GNW DQ
Sbjct: 135 VMVWFPGGAFIVGAASSYEGSDLAAREKVVLVFLQHRLGIFGFLSTDDSHARGNWGLLDQ 194
Query: 80 VAALSWVQKNIEFFGGDPSSVTIF 103
+AAL WVQ+NI FGGDP +VT+F
Sbjct: 195 MAALRWVQENIAAFGGDPGNVTLF 218
>gi|33563374 carboxylesterase 3 [Homo sapiens]
Length = 571
Score = 111 bits (278), Expect = 1e-25
Identities = 53/90 (58%), Positives = 68/90 (75%)
Query: 20 VLLWFPGGAFETGSASIFDGSSLAAYEDMLVVIVQYRLGIFGFFTTWDQHAPGNWAFKDQ 79
V++W GGA TG+A+ +DGS+LAAY D++VV VQYRLG+ GFF+T D+HAPGN F D
Sbjct: 143 VMVWVHGGALITGAATSYDGSALAAYGDVVVVTVQYRLGVLGFFSTGDEHAPGNQGFLDV 202
Query: 80 VAALSWVQKNIEFFGGDPSSVTIFDAVSHG 109
VAAL WVQ+NI FGGD + VT+F + G
Sbjct: 203 VAALRWVQENIAPFGGDLNCVTVFGGSAGG 232
>gi|68508967 carboxylesterase 1 isoform a precursor [Homo sapiens]
Length = 568
Score = 111 bits (277), Expect = 2e-25
Identities = 51/90 (56%), Positives = 67/90 (74%)
Query: 20 VLLWFPGGAFETGSASIFDGSSLAAYEDMLVVIVQYRLGIFGFFTTWDQHAPGNWAFKDQ 79
V++W GG G+AS +DG +LAA+E+++VV +QYRLGI+GFF+T D+H+ GNW DQ
Sbjct: 136 VMVWIHGGGLMVGAASTYDGLALAAHENVVVVTIQYRLGIWGFFSTGDEHSRGNWGHLDQ 195
Query: 80 VAALSWVQKNIEFFGGDPSSVTIFDAVSHG 109
VAAL WVQ NI FGG+P SVTIF + G
Sbjct: 196 VAALRWVQDNIASFGGNPGSVTIFGESAGG 225
>gi|68508965 carboxylesterase 1 isoform b precursor [Homo sapiens]
Length = 567
Score = 111 bits (277), Expect = 2e-25
Identities = 51/90 (56%), Positives = 67/90 (74%)
Query: 20 VLLWFPGGAFETGSASIFDGSSLAAYEDMLVVIVQYRLGIFGFFTTWDQHAPGNWAFKDQ 79
V++W GG G+AS +DG +LAA+E+++VV +QYRLGI+GFF+T D+H+ GNW DQ
Sbjct: 135 VMVWIHGGGLMVGAASTYDGLALAAHENVVVVTIQYRLGIWGFFSTGDEHSRGNWGHLDQ 194
Query: 80 VAALSWVQKNIEFFGGDPSSVTIFDAVSHG 109
VAAL WVQ NI FGG+P SVTIF + G
Sbjct: 195 VAALRWVQDNIASFGGNPGSVTIFGESAGG 224
>gi|68508957 carboxylesterase 1 isoform c precursor [Homo sapiens]
Length = 566
Score = 111 bits (277), Expect = 2e-25
Identities = 51/90 (56%), Positives = 67/90 (74%)
Query: 20 VLLWFPGGAFETGSASIFDGSSLAAYEDMLVVIVQYRLGIFGFFTTWDQHAPGNWAFKDQ 79
V++W GG G+AS +DG +LAA+E+++VV +QYRLGI+GFF+T D+H+ GNW DQ
Sbjct: 135 VMVWIHGGGLMVGAASTYDGLALAAHENVVVVTIQYRLGIWGFFSTGDEHSRGNWGHLDQ 194
Query: 80 VAALSWVQKNIEFFGGDPSSVTIFDAVSHG 109
VAAL WVQ NI FGG+P SVTIF + G
Sbjct: 195 VAALRWVQDNIASFGGNPGSVTIFGESAGG 224
>gi|7662470 neuroligin 1 [Homo sapiens]
Length = 823
Score = 93.2 bits (230), Expect = 5e-20
Identities = 40/93 (43%), Positives = 63/93 (67%)
Query: 17 PPRVLLWFPGGAFETGSASIFDGSSLAAYEDMLVVIVQYRLGIFGFFTTWDQHAPGNWAF 76
P V+++ GG++ G+ +++DGS LA+Y +++V+ V YRLG+ GF +T DQ A GN+
Sbjct: 172 PKPVMVYIHGGSYMEGTGNLYDGSVLASYGNVIVITVNYRLGVLGFLSTGDQAAKGNYGL 231
Query: 77 KDQVAALSWVQKNIEFFGGDPSSVTIFDAVSHG 109
D + AL W +NI FFGGDP +T+F + + G
Sbjct: 232 LDLIQALRWTSENIGFFGGDPLRITVFGSGAGG 264
>gi|30840978 neuroligin 2 [Homo sapiens]
Length = 835
Score = 93.2 bits (230), Expect = 5e-20
Identities = 41/84 (48%), Positives = 59/84 (70%)
Query: 20 VLLWFPGGAFETGSASIFDGSSLAAYEDMLVVIVQYRLGIFGFFTTWDQHAPGNWAFKDQ 79
V+L+ GG++ G+ ++FDGS LAAY +++V + YRLG+ GF +T DQ A GN+ DQ
Sbjct: 179 VMLFLHGGSYMEGTGNMFDGSVLAAYGNVIVATLNYRLGVLGFLSTGDQAAKGNYGLLDQ 238
Query: 80 VAALSWVQKNIEFFGGDPSSVTIF 103
+ AL W+ +NI FGGDP +TIF
Sbjct: 239 IQALRWLSENIAHFGGDPERITIF 262
>gi|31317256 X-linked neuroligin 4 [Homo sapiens]
Length = 816
Score = 92.0 bits (227), Expect = 1e-19
Identities = 39/84 (46%), Positives = 60/84 (71%)
Query: 20 VLLWFPGGAFETGSASIFDGSSLAAYEDMLVVIVQYRLGIFGFFTTWDQHAPGNWAFKDQ 79
V+++ GG++ G+ ++ DGS LA+Y +++V+ + YRLGI GF +T DQ A GN+ DQ
Sbjct: 168 VMVYIHGGSYMEGTGNMIDGSILASYGNVIVITINYRLGILGFLSTGDQAAKGNYGLLDQ 227
Query: 80 VAALSWVQKNIEFFGGDPSSVTIF 103
+ AL W+++N+ FGGDP VTIF
Sbjct: 228 IQALRWIEENVGAFGGDPKRVTIF 251
>gi|24308209 X-linked neuroligin 4 [Homo sapiens]
Length = 816
Score = 92.0 bits (227), Expect = 1e-19
Identities = 39/84 (46%), Positives = 60/84 (71%)
Query: 20 VLLWFPGGAFETGSASIFDGSSLAAYEDMLVVIVQYRLGIFGFFTTWDQHAPGNWAFKDQ 79
V+++ GG++ G+ ++ DGS LA+Y +++V+ + YRLGI GF +T DQ A GN+ DQ
Sbjct: 168 VMVYIHGGSYMEGTGNMIDGSILASYGNVIVITINYRLGILGFLSTGDQAAKGNYGLLDQ 227
Query: 80 VAALSWVQKNIEFFGGDPSSVTIF 103
+ AL W+++N+ FGGDP VTIF
Sbjct: 228 IQALRWIEENVGAFGGDPKRVTIF 251
>gi|51593088 neuroligin 3 [Homo sapiens]
Length = 828
Score = 92.0 bits (227), Expect = 1e-19
Identities = 38/84 (45%), Positives = 60/84 (71%)
Query: 20 VLLWFPGGAFETGSASIFDGSSLAAYEDMLVVIVQYRLGIFGFFTTWDQHAPGNWAFKDQ 79
V+++ GG++ G+ ++ DGS LA+Y +++V+ + YR+G+ GF +T DQ A GN+ DQ
Sbjct: 182 VMVYIHGGSYMEGTGNMIDGSILASYGNVIVITLNYRVGVLGFLSTGDQAAKGNYGLLDQ 241
Query: 80 VAALSWVQKNIEFFGGDPSSVTIF 103
+ AL WV +NI FFGGDP +T+F
Sbjct: 242 IQALRWVSENIAFFGGDPRRITVF 265
>gi|40538788 neuroligin 4, Y-linked [Homo sapiens]
Length = 816
Score = 88.6 bits (218), Expect = 1e-18
Identities = 38/84 (45%), Positives = 59/84 (70%)
Query: 20 VLLWFPGGAFETGSASIFDGSSLAAYEDMLVVIVQYRLGIFGFFTTWDQHAPGNWAFKDQ 79
V+++ GG++ G+ ++ DGS LA+Y +++V+ + RLGI GF +T DQ A GN+ DQ
Sbjct: 168 VMVYIHGGSYMEGTGNMIDGSILASYGNVIVITINCRLGILGFLSTGDQAAKGNYGLLDQ 227
Query: 80 VAALSWVQKNIEFFGGDPSSVTIF 103
+ AL W+++N+ FGGDP VTIF
Sbjct: 228 IQALRWIEENVGAFGGDPKRVTIF 251
>gi|4557351 butyrylcholinesterase precursor [Homo sapiens]
Length = 602
Score = 84.0 bits (206), Expect = 3e-17
Identities = 43/87 (49%), Positives = 56/87 (64%), Gaps = 3/87 (3%)
Query: 20 VLLWFPGGAFETGSAS--IFDGSSLAAYEDMLVVIVQYRLGIFGFFTT-WDQHAPGNWAF 76
VL+W GG F+TG++S ++DG LA E ++VV + YR+G GF + APGN
Sbjct: 137 VLIWIYGGGFQTGTSSLHVYDGKFLARVERVIVVSMNYRVGALGFLALPGNPEAPGNMGL 196
Query: 77 KDQVAALSWVQKNIEFFGGDPSSVTIF 103
DQ AL WVQKNI FGG+P SVT+F
Sbjct: 197 FDQQLALQWVQKNIAAFGGNPKSVTLF 223
>gi|4557239 acetylcholinesterase isoform E4-E6 precursor [Homo
sapiens]
Length = 614
Score = 82.4 bits (202), Expect = 9e-17
Identities = 49/110 (44%), Positives = 65/110 (59%), Gaps = 8/110 (7%)
Query: 16 SPPRVLLWFPGGAFETGSAS--IFDGSSLAAYEDMLVVIVQYRLGIFGFFTT-WDQHAPG 72
SP VL+W GG F +G++S ++DG L E ++V + YR+G FGF + APG
Sbjct: 141 SPTPVLVWIYGGGFYSGASSLDVYDGRFLVQAERTVLVSMNYRVGAFGFLALPGSREAPG 200
Query: 73 NWAFKDQVAALSWVQKNIEFFGGDPSSVTIF----DAVSHGRRLI-PQSR 117
N DQ AL WVQ+N+ FGGDP+SVT+F A S G L+ P SR
Sbjct: 201 NVGLLDQRLALQWVQENVAAFGGDPTSVTLFGESAGAASVGMHLLSPPSR 250
>gi|7710112 acetylcholinesterase isoform E4-E5 precursor [Homo
sapiens]
Length = 617
Score = 82.4 bits (202), Expect = 9e-17
Identities = 49/110 (44%), Positives = 65/110 (59%), Gaps = 8/110 (7%)
Query: 16 SPPRVLLWFPGGAFETGSAS--IFDGSSLAAYEDMLVVIVQYRLGIFGFFTT-WDQHAPG 72
SP VL+W GG F +G++S ++DG L E ++V + YR+G FGF + APG
Sbjct: 141 SPTPVLVWIYGGGFYSGASSLDVYDGRFLVQAERTVLVSMNYRVGAFGFLALPGSREAPG 200
Query: 73 NWAFKDQVAALSWVQKNIEFFGGDPSSVTIF----DAVSHGRRLI-PQSR 117
N DQ AL WVQ+N+ FGGDP+SVT+F A S G L+ P SR
Sbjct: 201 NVGLLDQRLALQWVQENVAAFGGDPTSVTLFGESAGAASVGMHLLSPPSR 250
>gi|148536848 carboxyl ester lipase precursor [Homo sapiens]
Length = 756
Score = 82.4 bits (202), Expect = 9e-17
Identities = 38/98 (38%), Positives = 60/98 (61%), Gaps = 8/98 (8%)
Query: 20 VLLWFPGGAFETGSAS--------IFDGSSLAAYEDMLVVIVQYRLGIFGFFTTWDQHAP 71
V++W GGAF GS ++DG +A +++VV YR+G GF +T D + P
Sbjct: 123 VMIWIYGGAFLMGSGHGANFLNNYLYDGEEIATRGNVIVVTFNYRVGPLGFLSTGDANLP 182
Query: 72 GNWAFKDQVAALSWVQKNIEFFGGDPSSVTIFDAVSHG 109
GN+ +DQ A++WV++NI FGGDP+++T+F + G
Sbjct: 183 GNYGLRDQHMAIAWVKRNIAAFGGDPNNITLFGESAGG 220
>gi|55770862 thyroglobulin [Homo sapiens]
Length = 2768
Score = 73.2 bits (178), Expect = 6e-14
Identities = 33/65 (50%), Positives = 44/65 (67%)
Query: 38 DGSSLAAYEDMLVVIVQYRLGIFGFFTTWDQHAPGNWAFKDQVAALSWVQKNIEFFGGDP 97
DGS LAA +++VV YR+G+FGF ++ GNW DQVAAL+WVQ +I FGGDP
Sbjct: 2318 DGSFLAAVGNLIVVTASYRVGVFGFLSSGSGEVSGNWGLLDQVAALTWVQTHIRGFGGDP 2377
Query: 98 SSVTI 102
V++
Sbjct: 2378 RRVSL 2382
>gi|61966717 arylacetamide deacetylase-like 4 [Homo sapiens]
Length = 407
Score = 32.3 bits (72), Expect = 0.11
Identities = 25/88 (28%), Positives = 43/88 (48%), Gaps = 11/88 (12%)
Query: 17 PPRVLLWFPGGAFETGSASIFDG--SSLAAYEDMLVVIVQYRLGIFGFFTTWDQHAPGNW 74
P R ++++ GGA GS + G + LA + +++++ YR D H+P
Sbjct: 111 PRRGIIFYHGGATVFGSLDCYHGLCNYLARETESVLLMIGYR-------KLPDHHSPA-- 161
Query: 75 AFKDQVAALSWVQKNIEFFGGDPSSVTI 102
F+D + A K +E +G DPS V +
Sbjct: 162 LFQDCMNASIHFLKALETYGVDPSRVVV 189
>gi|169173226 PREDICTED: hypothetical protein [Homo sapiens]
Length = 227
Score = 27.7 bits (60), Expect = 2.7
Identities = 11/21 (52%), Positives = 12/21 (57%)
Query: 111 RLIPQSRHGEWGGHHPLPEGP 131
RL+ SRH WGG LP P
Sbjct: 106 RLVESSRHMLWGGRAELPRAP 126
>gi|169172450 PREDICTED: hypothetical protein [Homo sapiens]
Length = 227
Score = 27.7 bits (60), Expect = 2.7
Identities = 11/21 (52%), Positives = 12/21 (57%)
Query: 111 RLIPQSRHGEWGGHHPLPEGP 131
RL+ SRH WGG LP P
Sbjct: 106 RLVESSRHMLWGGRAELPRAP 126
>gi|169172722 PREDICTED: hypothetical protein [Homo sapiens]
Length = 227
Score = 27.7 bits (60), Expect = 2.7
Identities = 11/21 (52%), Positives = 12/21 (57%)
Query: 111 RLIPQSRHGEWGGHHPLPEGP 131
RL+ SRH WGG LP P
Sbjct: 106 RLVESSRHMLWGGRAELPRAP 126
>gi|40805858 isthmin 2 homolog isoform 1 [Homo sapiens]
Length = 571
Score = 27.3 bits (59), Expect = 3.5
Identities = 12/23 (52%), Positives = 14/23 (60%), Gaps = 2/23 (8%)
Query: 61 GFFTTWDQH--APGNWAFKDQVA 81
G WDQ APG+W FKD V+
Sbjct: 301 GTTDNWDQGWLAPGDWVFKDSVS 323
>gi|145580590 hepatitis C virus F protein-binding protein 2 [Homo
sapiens]
Length = 938
Score = 26.2 bits (56), Expect = 7.8
Identities = 15/45 (33%), Positives = 22/45 (48%), Gaps = 4/45 (8%)
Query: 9 WADGTFLSPPRVLLWFPGGAFETGSASIFDGSSLAAYEDMLVVIV 53
WA GT P +LLW E G GSS++ + +LV+ +
Sbjct: 22 WALGTLPPPDALLLWAMEQVLEFG----LGGSSMSTHLRLLVMFI 62
Database: hs.faa
Posted date: Aug 4, 2009 4:42 PM
Number of letters in database: 18,247,518
Number of sequences in database: 37,866
Lambda K H
0.322 0.141 0.488
Gapped
Lambda K H
0.267 0.0410 0.140
Matrix: BLOSUM62
Gap Penalties: Existence: 11, Extension: 1
Number of Hits to DB: 6,233,941
Number of Sequences: 37866
Number of extensions: 261315
Number of successful extensions: 441
Number of sequences better than 10.0: 29
Number of HSP's better than 10.0 without gapping: 26
Number of HSP's successfully gapped in prelim test: 3
Number of HSP's that attempted gapping in prelim test: 408
Number of HSP's gapped (non-prelim): 29
length of query: 131
length of database: 18,247,518
effective HSP length: 91
effective length of query: 40
effective length of database: 14,801,712
effective search space: 592068480
effective search space used: 592068480
T: 11
A: 40
X1: 16 ( 7.4 bits)
X2: 38 (14.6 bits)
X3: 64 (24.7 bits)
S1: 41 (21.9 bits)
S2: 56 (26.2 bits)
Search results were obtained with NCBI BLAST and RefSeq entries.
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Guide to the Human Genome
Copyright © 2010 by Stewart Scherer. All rights reserved.