Guide to the Human Genome
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Name: NLGN4X Sequence: fasta or formatted (816aa) NCBI GI: 24308209
Description:

X-linked neuroligin 4

Referenced in:

Neurons

Other entries for this name:
alt mRNA [816aa] X-linked neuroligin 4
Composition:

amino acid map
 Amino acid        Percentage    Count  Longest homopolymer
 A alanine             5.6         46           2
 C cysteine            1.2         10           1
 D aspartate           6.1         50           2
 E glutamate           4.5         37           2
 F phenylalanine       3.9         32           1
 G glycine             6.1         50           2
 H histidine           3.3         27           2
 I isoleucine          5.6         46           2
 K lysine              4.4         36           2
 L leucine             9.2         75           2
 M methionine          2.7         22           1
 N asparagine          5.5         45           2
 P proline             7.5         61           3
 Q glutamine           4.3         35           2
 R arginine            3.9         32           2
 S serine              5.4         44           2
 T threonine           8.8         72           3
 V valine              5.8         47           2
 W tryptophan          1.6         13           1
 Y tyrosine            4.4         36           2
Comparative genomics:

Search single species RefSeq proteins at NCBI
   H. sapiens
   M. musculus
   D. rerio
   C. intestinalis
   S. purpuratus
   D. melanogaster
   C. elegans
   A. thaliana
   S. cerevisiae
   E. coli W3110
   A. pernix K1

Search summary

comparative genomics plot

   Figure data

Additional searches of
RefSeq proteins at NCBI

   All
   Eukaryotes
   Bacteria
   Archaea
   Viruses
   Primates
   Mammals
   Vertebrates

Related human proteins:
Protein          Relative score         Description

Self-match            1.000   X-linked neuroligin 4 
NLGN4X                1.000   X-linked neuroligin 4 
NLGN4Y                0.976   neuroligin 4, Y-linked 
NLGN3                 0.722   neuroligin 3 
NLGN1                 0.716   neuroligin 1 
NLGN2                 0.603   neuroligin 2 
BCHE                  0.178   butyrylcholinesterase precursor 
ACHE                  0.177   acetylcholinesterase isoform E4-E5 precursor 
ACHE                  0.176   acetylcholinesterase isoform E4-E6 precursor 
CES2                  0.161   carboxylesterase 2 isoform 1 
CES1                  0.160   carboxylesterase 1 isoform c precursor 
CES1                  0.159   carboxylesterase 1 isoform b precursor 
CES1                  0.159   carboxylesterase 1 isoform a precursor 
CES7                  0.157   carboxylesterase 7 isoform 1 
CEL                   0.154   carboxyl ester lipase precursor 
CES3                  0.154   carboxylesterase 3 
CES2                  0.153   carboxylesterase 2 isoform 2 
CES7                  0.128   carboxylesterase 7 isoform 2 
CES8                  0.123   carboxylesterase 8 (putative) 
TG                    0.101   thyroglobulin 
LOC649264             0.078   PREDICTED: similar to hCG40360 
LOC649264             0.078   PREDICTED: similar to hCG40360 
LOC649264             0.040   PREDICTED: similar to hCG40360 
CHST6                 0.005   carbohydrate (N-acetylglucosamine 6-O) sulfotransfer...
SEMA6D                0.005   semaphorin 6D isoform 1 precursor 
SEMA6D                0.005   semaphorin 6D isoform 4 precursor 
SEMA6D                0.005   semaphorin 6D isoform 3 precursor 
SEMA6D                0.005   semaphorin 6D isoform 2 precursor 
SMN2                  0.004   survival of motor neuron 2, centromeric isoform d [H...
SMN1                  0.004   survival of motor neuron 1, telomeric isoform d [Homo...
Human BLASTP results (used to prepare the table)

Gene descriptions are from NCBI RefSeq. Search results were obtained with NCBI BLAST and RefSeq entries. When identical proteins are present, the self-match may not be listed first in BLASTP output. In such cases, the table above has been reordered to place it first.

See About the Figures for the scoring system used in the figure above right. The same scoring system was used in the table of BLASTP results.


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Guide to the Human Genome
Copyright © 2010 by Stewart Scherer. All rights reserved.

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