BLASTP 2.2.11 [Jun-05-2005] Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Query= gi|239752154 PREDICTED: hypothetical protein XP_002348155 [Homo sapiens] (112 letters) Database: hs.faa 37,866 sequences; 18,247,518 total letters Searching..................................................done Score E Sequences producing significant alignments: (bits) Value gi|239752154 PREDICTED: hypothetical protein XP_002348155 [Homo ... 244 1e-65 gi|239752152 PREDICTED: hypothetical protein XP_002348153 [Homo ... 96 6e-21 gi|239757668 PREDICTED: similar to Ig lambda chain [Homo sapiens] 83 4e-17 gi|239757666 PREDICTED: similar to hCG2040021 [Homo sapiens] 59 1e-09 gi|239753214 PREDICTED: similar to hCG2043206 [Homo sapiens] 53 6e-08 gi|169163270 PREDICTED: similar to hCG2043206 [Homo sapiens] 52 8e-08 gi|239753212 PREDICTED: similar to hCG1686089 [Homo sapiens] 52 1e-07 gi|239749464 PREDICTED: hypothetical protein XP_002347049 [Homo ... 52 1e-07 gi|169217719 PREDICTED: similar to hCG96018 [Homo sapiens] 51 2e-07 gi|89062025 PREDICTED: similar to hCG96018 [Homo sapiens] 51 2e-07 gi|239755286 PREDICTED: similar to hCG1742442 [Homo sapiens] 48 1e-06 gi|169194776 PREDICTED: similar to hCG1742442 [Homo sapiens] 48 1e-06 gi|169190399 PREDICTED: similar to hCG1742442 [Homo sapiens] 48 1e-06 gi|239741653 PREDICTED: hypothetical protein XP_002342271 [Homo ... 48 1e-06 gi|239757664 PREDICTED: similar to hCG2040019 [Homo sapiens] 48 2e-06 gi|169218204 PREDICTED: similar to pre-B lymphocyte gene 1 [Homo... 48 2e-06 gi|239753235 PREDICTED: similar to hCG36857 [Homo sapiens] 47 3e-06 gi|169167318 PREDICTED: similar to hCG2042707 [Homo sapiens] 47 3e-06 gi|239747814 PREDICTED: hypothetical protein XP_002348323 [Homo ... 47 3e-06 gi|239747808 PREDICTED: hypothetical protein XP_002348319 [Homo ... 47 3e-06 gi|169163335 PREDICTED: similar to hCG1742442 [Homo sapiens] 47 3e-06 gi|9507239 immunoglobulin iota chain precursor [Homo sapiens] 47 3e-06 gi|169163724 PREDICTED: similar to hCG26659 [Homo sapiens] 47 4e-06 gi|239747852 PREDICTED: hypothetical protein XP_002346449 [Homo ... 47 4e-06 gi|169163023 PREDICTED: similar to hCG26659 [Homo sapiens] 47 4e-06 gi|169217390 PREDICTED: similar to hCG1742442 [Homo sapiens] 46 7e-06 gi|169217347 PREDICTED: similar to hCG1742442 [Homo sapiens] 46 7e-06 gi|169174843 PREDICTED: similar to hCG1742442 [Homo sapiens] 44 2e-05 gi|239743839 PREDICTED: hypothetical protein XP_002342967 [Homo ... 44 2e-05 gi|7019567 pre-B lymphocyte 3 [Homo sapiens] 43 6e-05 >gi|239752154 PREDICTED: hypothetical protein XP_002348155 [Homo sapiens] Length = 112 Score = 244 bits (622), Expect = 1e-65 Identities = 112/112 (100%), Positives = 112/112 (100%) Query: 1 MKIDQNNPLGMCPGPPRGKSFPSIQRCRIHRGRRALATREEPHERTRCPHKWERSWAQSV 60 MKIDQNNPLGMCPGPPRGKSFPSIQRCRIHRGRRALATREEPHERTRCPHKWERSWAQSV Sbjct: 1 MKIDQNNPLGMCPGPPRGKSFPSIQRCRIHRGRRALATREEPHERTRCPHKWERSWAQSV 60 Query: 61 LTQPPSVSGAPGQRVTISCTGSSSNIGAGYDVHWYQQLPGTAPKLLIYGSRP 112 LTQPPSVSGAPGQRVTISCTGSSSNIGAGYDVHWYQQLPGTAPKLLIYGSRP Sbjct: 61 LTQPPSVSGAPGQRVTISCTGSSSNIGAGYDVHWYQQLPGTAPKLLIYGSRP 112 >gi|239752152 PREDICTED: hypothetical protein XP_002348153 [Homo sapiens] Length = 264 Score = 95.9 bits (237), Expect = 6e-21 Identities = 46/56 (82%), Positives = 50/56 (89%), Gaps = 1/56 (1%) Query: 55 SWAQSVLTQPPSVSGAPGQRVTISCTGSSSNIGAGYDVHWYQQLPGTAPKLLIYGS 110 SWAQSVLTQPPS SG PGQRVTISC+GSSSNIG+ V+WYQQLPGTAPKLLIY + Sbjct: 43 SWAQSVLTQPPSASGTPGQRVTISCSGSSSNIGSN-TVNWYQQLPGTAPKLLIYSN 97 >gi|239757668 PREDICTED: similar to Ig lambda chain [Homo sapiens] Length = 288 Score = 83.2 bits (204), Expect = 4e-17 Identities = 38/54 (70%), Positives = 44/54 (81%) Query: 55 SWAQSVLTQPPSVSGAPGQRVTISCTGSSSNIGAGYDVHWYQQLPGTAPKLLIY 108 SWAQS LTQP SVSG+PGQ +TISCTG+SS++G V WYQQ PG APKL+IY Sbjct: 17 SWAQSALTQPASVSGSPGQSITISCTGTSSDVGGYNYVSWYQQHPGKAPKLMIY 70 Score = 49.3 bits (116), Expect = 7e-07 Identities = 29/60 (48%), Positives = 35/60 (58%), Gaps = 5/60 (8%) Query: 55 SWAQSVLTQPPSVSGAPGQRVTISCTGSSSNIGAGYDVHWYQQLPGTAPKLLIY--GSRP 112 S A LTQPP+VS +PGQ ISC+G ++ WY Q PG AP L+IY G RP Sbjct: 195 SVASYELTQPPAVSVSPGQTARISCSG---DVLRDNYADWYPQKPGQAPVLVIYKDGERP 251 >gi|239757666 PREDICTED: similar to hCG2040021 [Homo sapiens] Length = 137 Score = 58.5 bits (140), Expect = 1e-09 Identities = 30/49 (61%), Positives = 36/49 (73%), Gaps = 3/49 (6%) Query: 60 VLTQPPSVSGAPGQRVTISCTGSSSNIGAGYDVHWYQQLPGTAPKLLIY 108 VLTQPPSVS APG+ I+C G +NIG+ VHWYQQ PG AP L++Y Sbjct: 22 VLTQPPSVSVAPGKTARITCGG--NNIGS-KSVHWYQQKPGQAPVLVVY 67 >gi|239753214 PREDICTED: similar to hCG2043206 [Homo sapiens] Length = 157 Score = 52.8 bits (125), Expect = 6e-08 Identities = 28/58 (48%), Positives = 40/58 (68%), Gaps = 3/58 (5%) Query: 54 RSWAQSVLTQPPS-VSGAPGQRVTISCTGSSSNIGAGYDVHWYQQLPGTAPKLLIYGS 110 R + V+TQ P+ +S +PG+R T+SC S S + + Y + WYQQ PG AP+LLIYG+ Sbjct: 22 RYHGEIVMTQSPATLSLSPGERATLSCRASQS-VSSSY-LSWYQQKPGQAPRLLIYGA 77 >gi|169163270 PREDICTED: similar to hCG2043206 [Homo sapiens] Length = 151 Score = 52.4 bits (124), Expect = 8e-08 Identities = 27/52 (51%), Positives = 38/52 (73%), Gaps = 3/52 (5%) Query: 60 VLTQPPS-VSGAPGQRVTISCTGSSSNIGAGYDVHWYQQLPGTAPKLLIYGS 110 V+TQ P+ +S +PG+R T+SC S S + + Y + WYQQ PG AP+LLIYG+ Sbjct: 23 VMTQSPATLSLSPGERATLSCRASQS-VSSSY-LSWYQQKPGQAPRLLIYGA 72 >gi|239753212 PREDICTED: similar to hCG1686089 [Homo sapiens] Length = 152 Score = 52.0 bits (123), Expect = 1e-07 Identities = 27/50 (54%), Positives = 38/50 (76%), Gaps = 3/50 (6%) Query: 60 VLTQPPS-VSGAPGQRVTISCTGSSSNIGAGYDVHWYQQLPGTAPKLLIY 108 VLTQ P+ +S +PG+R T+SC G+S ++ + Y + WYQQ PG AP+LLIY Sbjct: 23 VLTQSPATLSLSPGERATLSC-GASQSVSSSY-LAWYQQKPGLAPRLLIY 70 >gi|239749464 PREDICTED: hypothetical protein XP_002347049 [Homo sapiens] Length = 152 Score = 52.0 bits (123), Expect = 1e-07 Identities = 27/50 (54%), Positives = 38/50 (76%), Gaps = 3/50 (6%) Query: 60 VLTQPPS-VSGAPGQRVTISCTGSSSNIGAGYDVHWYQQLPGTAPKLLIY 108 VLTQ P+ +S +PG+R T+SC G+S ++ + Y + WYQQ PG AP+LLIY Sbjct: 23 VLTQSPATLSLSPGERATLSC-GASQSVSSSY-LAWYQQKPGLAPRLLIY 70 >gi|169217719 PREDICTED: similar to hCG96018 [Homo sapiens] Length = 150 Score = 50.8 bits (120), Expect = 2e-07 Identities = 25/54 (46%), Positives = 35/54 (64%), Gaps = 2/54 (3%) Query: 55 SWAQSVLTQPPSVSGAPGQRVTISCT-GSSSNIGAGYDVHWYQQLPGTAPKLLI 107 S +Q VLTQP S+S +PG +CT S N+G Y ++WYQQ PG+ P+ L+ Sbjct: 17 SLSQPVLTQPTSLSASPGASARFTCTLRSGINVGT-YRIYWYQQKPGSLPRYLL 69 >gi|89062025 PREDICTED: similar to hCG96018 [Homo sapiens] Length = 150 Score = 50.8 bits (120), Expect = 2e-07 Identities = 25/54 (46%), Positives = 35/54 (64%), Gaps = 2/54 (3%) Query: 55 SWAQSVLTQPPSVSGAPGQRVTISCT-GSSSNIGAGYDVHWYQQLPGTAPKLLI 107 S +Q VLTQP S+S +PG +CT S N+G Y ++WYQQ PG+ P+ L+ Sbjct: 17 SLSQPVLTQPTSLSASPGASARFTCTLRSGINVGT-YRIYWYQQKPGSLPRYLL 69 >gi|239755286 PREDICTED: similar to hCG1742442 [Homo sapiens] Length = 296 Score = 48.1 bits (113), Expect = 1e-06 Identities = 23/47 (48%), Positives = 30/47 (63%), Gaps = 3/47 (6%) Query: 64 PPSVSGAPGQRVTISCTGSSSNIGAGYDVHWYQQLPGTAPKLLIYGS 110 P S+S + G RVTI+C S G +++WYQQ PG PKLLIY + Sbjct: 201 PSSLSASVGDRVTITCRASQ---GISNNLNWYQQKPGKTPKLLIYAA 244 >gi|169194776 PREDICTED: similar to hCG1742442 [Homo sapiens] Length = 242 Score = 48.1 bits (113), Expect = 1e-06 Identities = 23/47 (48%), Positives = 30/47 (63%), Gaps = 3/47 (6%) Query: 64 PPSVSGAPGQRVTISCTGSSSNIGAGYDVHWYQQLPGTAPKLLIYGS 110 P S+S + G RVTI+C S G +++WYQQ PG PKLLIY + Sbjct: 147 PSSLSASVGDRVTITCRASQ---GISNNLNWYQQKPGKTPKLLIYAA 190 >gi|169190399 PREDICTED: similar to hCG1742442 [Homo sapiens] Length = 242 Score = 48.1 bits (113), Expect = 1e-06 Identities = 23/47 (48%), Positives = 30/47 (63%), Gaps = 3/47 (6%) Query: 64 PPSVSGAPGQRVTISCTGSSSNIGAGYDVHWYQQLPGTAPKLLIYGS 110 P S+S + G RVTI+C S G +++WYQQ PG PKLLIY + Sbjct: 147 PSSLSASVGDRVTITCRASQ---GISNNLNWYQQKPGKTPKLLIYAA 190 >gi|239741653 PREDICTED: hypothetical protein XP_002342271 [Homo sapiens] Length = 636 Score = 48.1 bits (113), Expect = 1e-06 Identities = 23/47 (48%), Positives = 30/47 (63%), Gaps = 3/47 (6%) Query: 64 PPSVSGAPGQRVTISCTGSSSNIGAGYDVHWYQQLPGTAPKLLIYGS 110 P S+S + G RVTI+C S G +++WYQQ PG PKLLIY + Sbjct: 541 PSSLSASVGDRVTITCRASQ---GISNNLNWYQQKPGKTPKLLIYAA 584 >gi|239757664 PREDICTED: similar to hCG2040019 [Homo sapiens] Length = 645 Score = 47.8 bits (112), Expect = 2e-06 Identities = 22/35 (62%), Positives = 28/35 (80%) Query: 53 ERSWAQSVLTQPPSVSGAPGQRVTISCTGSSSNIG 87 + S +S LTQP SV G+PGQ VTISCTG+SS++G Sbjct: 357 DASAPRSALTQPHSVPGSPGQSVTISCTGTSSDVG 391 Score = 47.0 bits (110), Expect = 3e-06 Identities = 26/54 (48%), Positives = 33/54 (61%), Gaps = 3/54 (5%) Query: 55 SWAQSVLTQPPSVSGAPGQRVTISCTGSSSNIGAGYDVHWYQQLPGTAPKLLIY 108 S A LTQP SVS +PGQ I+C+G ++ A W+QQ PG AP L+IY Sbjct: 486 SVASYELTQPSSVSVSPGQTARITCSG---DVLAKKYARWFQQKPGQAPVLVIY 536 >gi|169218204 PREDICTED: similar to pre-B lymphocyte gene 1 [Homo sapiens] Length = 123 Score = 47.8 bits (112), Expect = 2e-06 Identities = 27/51 (52%), Positives = 32/51 (62%), Gaps = 4/51 (7%) Query: 61 LTQPPS-VSGAPGQRVTISCTGSSSNIGAGYDVHWYQQLPGTAPKLLIYGS 110 LTQ PS +S + G RVTI+C S G + WYQQ PG APKLLIY + Sbjct: 26 LTQSPSFLSASVGDRVTITCRASQ---GISSYLAWYQQKPGKAPKLLIYAA 73 >gi|239753235 PREDICTED: similar to hCG36857 [Homo sapiens] Length = 108 Score = 47.4 bits (111), Expect = 3e-06 Identities = 25/49 (51%), Positives = 31/49 (63%), Gaps = 4/49 (8%) Query: 61 LTQPPS-VSGAPGQRVTISCTGSSSNIGAGYDVHWYQQLPGTAPKLLIY 108 +TQPPS +S + G RVT+SC S S ++WYQQ PG APK L Y Sbjct: 26 MTQPPSSLSASVGDRVTVSCQASQSIYNY---LNWYQQKPGKAPKFLTY 71 >gi|169167318 PREDICTED: similar to hCG2042707 [Homo sapiens] Length = 142 Score = 47.4 bits (111), Expect = 3e-06 Identities = 23/47 (48%), Positives = 29/47 (61%), Gaps = 3/47 (6%) Query: 64 PPSVSGAPGQRVTISCTGSSSNIGAGYDVHWYQQLPGTAPKLLIYGS 110 P S+S + G RVTI+C S G + WYQQ PG APKLL+Y + Sbjct: 39 PSSLSASVGDRVTITCRASQ---GISNSLAWYQQKPGKAPKLLLYAA 82 >gi|239747814 PREDICTED: hypothetical protein XP_002348323 [Homo sapiens] Length = 162 Score = 47.4 bits (111), Expect = 3e-06 Identities = 26/49 (53%), Positives = 31/49 (63%), Gaps = 4/49 (8%) Query: 61 LTQPPS-VSGAPGQRVTISCTGSSSNIGAGYDVHWYQQLPGTAPKLLIY 108 +TQPPS +S + G VTI+C S S + WYQQ PG APKLLIY Sbjct: 76 MTQPPSSLSASVGDSVTITCRASQSFTN---QLAWYQQKPGKAPKLLIY 121 >gi|239747808 PREDICTED: hypothetical protein XP_002348319 [Homo sapiens] Length = 108 Score = 47.4 bits (111), Expect = 3e-06 Identities = 25/49 (51%), Positives = 31/49 (63%), Gaps = 4/49 (8%) Query: 61 LTQPPS-VSGAPGQRVTISCTGSSSNIGAGYDVHWYQQLPGTAPKLLIY 108 +TQPPS +S + G RVT+SC S S ++WYQQ PG APK L Y Sbjct: 26 MTQPPSSLSASVGDRVTVSCQASQSIYNY---LNWYQQKPGKAPKFLTY 71 >gi|169163335 PREDICTED: similar to hCG1742442 [Homo sapiens] Length = 295 Score = 47.4 bits (111), Expect = 3e-06 Identities = 23/47 (48%), Positives = 30/47 (63%), Gaps = 3/47 (6%) Query: 64 PPSVSGAPGQRVTISCTGSSSNIGAGYDVHWYQQLPGTAPKLLIYGS 110 P S+S + G RVTI+C S G +++WYQQ PG PKLLIY + Sbjct: 200 PSSLSASVGGRVTITCRASQ---GISNNLNWYQQKPGKTPKLLIYAA 243 >gi|9507239 immunoglobulin iota chain precursor [Homo sapiens] Length = 145 Score = 47.0 bits (110), Expect = 3e-06 Identities = 21/50 (42%), Positives = 31/50 (62%) Query: 58 QSVLTQPPSVSGAPGQRVTISCTGSSSNIGAGYDVHWYQQLPGTAPKLLI 107 Q VL QPP++S A G + ++CT + + Y V+WYQQ PG P+ L+ Sbjct: 20 QPVLHQPPAMSSALGTTIRLTCTLRNDHDIGVYSVYWYQQRPGHPPRFLL 69 >gi|169163724 PREDICTED: similar to hCG26659 [Homo sapiens] Length = 191 Score = 46.6 bits (109), Expect = 4e-06 Identities = 24/51 (47%), Positives = 29/51 (56%), Gaps = 3/51 (5%) Query: 60 VLTQPPSVSGAPGQRVTISCTGSSSNIGAGYDVHWYQQLPGTAPKLLIYGS 110 V P S+S + G RVTI+C S G + WYQQ PG AP LLIY + Sbjct: 26 VTQSPSSLSASVGDRVTITCRASQ---GISNGLSWYQQKPGQAPTLLIYAA 73 >gi|239747852 PREDICTED: hypothetical protein XP_002346449 [Homo sapiens] Length = 155 Score = 46.6 bits (109), Expect = 4e-06 Identities = 24/51 (47%), Positives = 29/51 (56%), Gaps = 3/51 (5%) Query: 60 VLTQPPSVSGAPGQRVTISCTGSSSNIGAGYDVHWYQQLPGTAPKLLIYGS 110 V P S+S + G RVTI+C S G + WYQQ PG AP LLIY + Sbjct: 26 VTQSPSSLSASVGDRVTITCRASQ---GISNGLSWYQQKPGQAPTLLIYAA 73 >gi|169163023 PREDICTED: similar to hCG26659 [Homo sapiens] Length = 191 Score = 46.6 bits (109), Expect = 4e-06 Identities = 24/51 (47%), Positives = 29/51 (56%), Gaps = 3/51 (5%) Query: 60 VLTQPPSVSGAPGQRVTISCTGSSSNIGAGYDVHWYQQLPGTAPKLLIYGS 110 V P S+S + G RVTI+C S G + WYQQ PG AP LLIY + Sbjct: 26 VTQSPSSLSASVGDRVTITCRASQ---GISNGLSWYQQKPGQAPTLLIYAA 73 >gi|169217390 PREDICTED: similar to hCG1742442 [Homo sapiens] Length = 205 Score = 45.8 bits (107), Expect = 7e-06 Identities = 22/47 (46%), Positives = 30/47 (63%), Gaps = 3/47 (6%) Query: 64 PPSVSGAPGQRVTISCTGSSSNIGAGYDVHWYQQLPGTAPKLLIYGS 110 P S+S + G RVTI+C S I +++WYQ+ PG PKLLIY + Sbjct: 110 PSSLSASVGDRVTITCRASQGIIN---NLNWYQKKPGKTPKLLIYAA 153 >gi|169217347 PREDICTED: similar to hCG1742442 [Homo sapiens] Length = 205 Score = 45.8 bits (107), Expect = 7e-06 Identities = 22/47 (46%), Positives = 30/47 (63%), Gaps = 3/47 (6%) Query: 64 PPSVSGAPGQRVTISCTGSSSNIGAGYDVHWYQQLPGTAPKLLIYGS 110 P S+S + G RVTI+C S I +++WYQ+ PG PKLLIY + Sbjct: 110 PSSLSASVGDRVTITCRASQGIIN---NLNWYQKKPGKTPKLLIYAA 153 >gi|169174843 PREDICTED: similar to hCG1742442 [Homo sapiens] Length = 276 Score = 44.3 bits (103), Expect = 2e-05 Identities = 22/47 (46%), Positives = 29/47 (61%), Gaps = 3/47 (6%) Query: 64 PPSVSGAPGQRVTISCTGSSSNIGAGYDVHWYQQLPGTAPKLLIYGS 110 P S+S + G RVTI+C S G +++WYQQ P PKLLIY + Sbjct: 181 PSSLSASVGGRVTITCRASQ---GISNNLNWYQQKPRKTPKLLIYAA 224 >gi|239743839 PREDICTED: hypothetical protein XP_002342967 [Homo sapiens] Length = 761 Score = 44.3 bits (103), Expect = 2e-05 Identities = 22/47 (46%), Positives = 29/47 (61%), Gaps = 3/47 (6%) Query: 64 PPSVSGAPGQRVTISCTGSSSNIGAGYDVHWYQQLPGTAPKLLIYGS 110 P S+S + G RVTI+C S G +++WYQQ P PKLLIY + Sbjct: 666 PSSLSASVGGRVTITCRASQ---GISNNLNWYQQKPRKTPKLLIYAA 709 >gi|7019567 pre-B lymphocyte 3 [Homo sapiens] Length = 123 Score = 42.7 bits (99), Expect = 6e-05 Identities = 23/55 (41%), Positives = 33/55 (60%), Gaps = 1/55 (1%) Query: 55 SWAQSVLTQPPSVSGAPGQRVTISCTGSSSNIGA-GYDVHWYQQLPGTAPKLLIY 108 S +Q+VL Q ++ PGQ +SCT S ++ Y V WYQQ G+AP+ L+Y Sbjct: 16 SVSQTVLAQLDALLVFPGQVAQLSCTLSPQHVTIRDYGVSWYQQRAGSAPRYLLY 70 Database: hs.faa Posted date: Aug 4, 2009 4:42 PM Number of letters in database: 18,247,518 Number of sequences in database: 37,866 Lambda K H 0.318 0.135 0.447 Gapped Lambda K H 0.267 0.0410 0.140 Matrix: BLOSUM62 Gap Penalties: Existence: 11, Extension: 1 Number of Hits to DB: 6,017,766 Number of Sequences: 37866 Number of extensions: 285411 Number of successful extensions: 1087 Number of sequences better than 10.0: 30 Number of HSP's better than 10.0 without gapping: 43 Number of HSP's successfully gapped in prelim test: 66 Number of HSP's that attempted gapping in prelim test: 1010 Number of HSP's gapped (non-prelim): 117 length of query: 112 length of database: 18,247,518 effective HSP length: 82 effective length of query: 30 effective length of database: 15,142,506 effective search space: 454275180 effective search space used: 454275180 T: 11 A: 40 X1: 16 ( 7.3 bits) X2: 38 (14.6 bits) X3: 64 (24.7 bits) S1: 41 (21.7 bits) S2: 55 (25.8 bits)
Search results were obtained with NCBI BLAST and RefSeq entries.
Guide to the Human Genome
Copyright © 2010 by Stewart Scherer. All rights reserved.