Guide to the Human Genome
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Search of human proteins with 239751927

BLASTP 2.2.11 [Jun-05-2005]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= gi|239751927 PREDICTED: similar to signal-regulatory protein
beta 1 [Homo sapiens]
         (136 letters)

Database: hs.faa 
           37,866 sequences; 18,247,518 total letters

Searching..................................................done

                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

gi|239751927 PREDICTED: similar to signal-regulatory protein bet...   278   1e-75
gi|169217521 PREDICTED: similar to signal-regulatory protein bet...   257   2e-69
gi|144953876 signal-regulatory protein beta 1 isoform 1 precurso...   244   2e-65
gi|144953878 signal-regulatory protein beta 1 isoform 2 precurso...   239   4e-64
gi|18426911 signal-regulatory protein alpha precursor [Homo sapi...   230   3e-61
gi|91105767 signal-regulatory protein alpha precursor [Homo sapi...   230   3e-61
gi|91105764 signal-regulatory protein alpha precursor [Homo sapi...   230   3e-61
gi|209529703 signal-regulatory protein beta 1 isoform 3 precurso...   225   8e-60
gi|94538339 signal-regulatory protein gamma isoform 3 precursor ...   200   3e-52
gi|94538335 signal-regulatory protein gamma isoform 1 precursor ...   200   3e-52
gi|94538337 signal-regulatory protein gamma isoform 2 precursor ...   197   3e-51
gi|239757417 PREDICTED: similar to hCG2019710 [Homo sapiens]          154   3e-38
gi|239751934 PREDICTED: hypothetical protein XP_002348043 [Homo ...   154   3e-38
gi|239746419 PREDICTED: hypothetical protein XP_002344218 [Homo ...   113   5e-26
gi|30425382 signal-regulatory protein delta [Homo sapiens]            111   2e-25
gi|198386341 signal-regulatory protein beta 2 isoform 2 [Homo sa...    90   6e-19
gi|171906611 signal-regulatory protein beta 2 isoform 1 [Homo sa...    90   6e-19
gi|239753214 PREDICTED: similar to hCG2043206 [Homo sapiens]           46   1e-05
gi|169163270 PREDICTED: similar to hCG2043206 [Homo sapiens]           46   1e-05
gi|239753212 PREDICTED: similar to hCG1686089 [Homo sapiens]           45   2e-05
gi|239749464 PREDICTED: hypothetical protein XP_002347049 [Homo ...    45   2e-05
gi|239747814 PREDICTED: hypothetical protein XP_002348323 [Homo ...    43   7e-05
gi|169163724 PREDICTED: similar to hCG26659 [Homo sapiens]             42   2e-04
gi|239747852 PREDICTED: hypothetical protein XP_002346449 [Homo ...    42   2e-04
gi|169163023 PREDICTED: similar to hCG26659 [Homo sapiens]             42   2e-04
gi|6453813 butyrophilin, subfamily 2, member A2 isoform a [Homo ...    39   0.001
gi|5921461 butyrophilin, subfamily 2, member A1 isoform 1 precur...    39   0.002
gi|17975772 butyrophilin, subfamily 2, member A1 isoform 2 precu...    39   0.002
gi|239755286 PREDICTED: similar to hCG1742442 [Homo sapiens]           38   0.002
gi|169194776 PREDICTED: similar to hCG1742442 [Homo sapiens]           38   0.002

>gi|239751927 PREDICTED: similar to signal-regulatory protein beta 1
           [Homo sapiens]
          Length = 136

 Score =  278 bits (710), Expect = 1e-75
 Identities = 136/136 (100%), Positives = 136/136 (100%)

Query: 1   MTALCSFPGVAGEDELQVIQPEKSVSVAAGESATLRCAMTSLIPVGPIMWFRGAGAGREL 60
           MTALCSFPGVAGEDELQVIQPEKSVSVAAGESATLRCAMTSLIPVGPIMWFRGAGAGREL
Sbjct: 1   MTALCSFPGVAGEDELQVIQPEKSVSVAAGESATLRCAMTSLIPVGPIMWFRGAGAGREL 60

Query: 61  IYNQKEGHFPRVTTVSELTKRNNLDFSISISNITPADAGTYYCVKFRKGSPDDVEFKSGA 120
           IYNQKEGHFPRVTTVSELTKRNNLDFSISISNITPADAGTYYCVKFRKGSPDDVEFKSGA
Sbjct: 61  IYNQKEGHFPRVTTVSELTKRNNLDFSISISNITPADAGTYYCVKFRKGSPDDVEFKSGA 120

Query: 121 GTELSVRADPALWFHR 136
           GTELSVRADPALWFHR
Sbjct: 121 GTELSVRADPALWFHR 136


>gi|169217521 PREDICTED: similar to signal-regulatory protein beta 1
           [Homo sapiens]
          Length = 160

 Score =  257 bits (657), Expect = 2e-69
 Identities = 127/129 (98%), Positives = 128/129 (99%)

Query: 1   MTALCSFPGVAGEDELQVIQPEKSVSVAAGESATLRCAMTSLIPVGPIMWFRGAGAGREL 60
           MTALCSFPGVAGEDELQVIQPEKSVSVAAGESATLRCAMTSLIPVGPIMWFRGAGAGREL
Sbjct: 1   MTALCSFPGVAGEDELQVIQPEKSVSVAAGESATLRCAMTSLIPVGPIMWFRGAGAGREL 60

Query: 61  IYNQKEGHFPRVTTVSELTKRNNLDFSISISNITPADAGTYYCVKFRKGSPDDVEFKSGA 120
           IYNQKEGHFPRVTTVSELTKRNNLDFSISISNITPADAGTYYCVKFRKGSPDDVEFKSGA
Sbjct: 61  IYNQKEGHFPRVTTVSELTKRNNLDFSISISNITPADAGTYYCVKFRKGSPDDVEFKSGA 120

Query: 121 GTELSVRAD 129
           GTELSVR +
Sbjct: 121 GTELSVRGE 129


>gi|144953876 signal-regulatory protein beta 1 isoform 1 precursor
           [Homo sapiens]
          Length = 398

 Score =  244 bits (622), Expect = 2e-65
 Identities = 121/123 (98%), Positives = 122/123 (99%)

Query: 9   GVAGEDELQVIQPEKSVSVAAGESATLRCAMTSLIPVGPIMWFRGAGAGRELIYNQKEGH 68
           GVAGEDELQVIQPEKSVSVAAGESATLRCAMTSLIPVGPIMWFRGAGAGRELIYNQKEGH
Sbjct: 26  GVAGEDELQVIQPEKSVSVAAGESATLRCAMTSLIPVGPIMWFRGAGAGRELIYNQKEGH 85

Query: 69  FPRVTTVSELTKRNNLDFSISISNITPADAGTYYCVKFRKGSPDDVEFKSGAGTELSVRA 128
           FPRVTTVSELTKRNNLDFSISISNITPADAGTYYCVKFRKGSPDDVEFKSGAGTELSVRA
Sbjct: 86  FPRVTTVSELTKRNNLDFSISISNITPADAGTYYCVKFRKGSPDDVEFKSGAGTELSVRA 145

Query: 129 DPA 131
            P+
Sbjct: 146 KPS 148


>gi|144953878 signal-regulatory protein beta 1 isoform 2 precursor
           [Homo sapiens]
          Length = 181

 Score =  239 bits (611), Expect = 4e-64
 Identities = 119/119 (100%), Positives = 119/119 (100%)

Query: 9   GVAGEDELQVIQPEKSVSVAAGESATLRCAMTSLIPVGPIMWFRGAGAGRELIYNQKEGH 68
           GVAGEDELQVIQPEKSVSVAAGESATLRCAMTSLIPVGPIMWFRGAGAGRELIYNQKEGH
Sbjct: 26  GVAGEDELQVIQPEKSVSVAAGESATLRCAMTSLIPVGPIMWFRGAGAGRELIYNQKEGH 85

Query: 69  FPRVTTVSELTKRNNLDFSISISNITPADAGTYYCVKFRKGSPDDVEFKSGAGTELSVR 127
           FPRVTTVSELTKRNNLDFSISISNITPADAGTYYCVKFRKGSPDDVEFKSGAGTELSVR
Sbjct: 86  FPRVTTVSELTKRNNLDFSISISNITPADAGTYYCVKFRKGSPDDVEFKSGAGTELSVR 144


>gi|18426911 signal-regulatory protein alpha precursor [Homo
           sapiens]
          Length = 504

 Score =  230 bits (586), Expect = 3e-61
 Identities = 111/131 (84%), Positives = 120/131 (91%)

Query: 1   MTALCSFPGVAGEDELQVIQPEKSVSVAAGESATLRCAMTSLIPVGPIMWFRGAGAGREL 60
           + A C++ GVAGE+ELQVIQP+KSV VAAGE+ATLRC  TSLIPVGPI WFRGAG GREL
Sbjct: 19  LAASCAWSGVAGEEELQVIQPDKSVLVAAGETATLRCTATSLIPVGPIQWFRGAGPGREL 78

Query: 61  IYNQKEGHFPRVTTVSELTKRNNLDFSISISNITPADAGTYYCVKFRKGSPDDVEFKSGA 120
           IYNQKEGHFPRVTTVS+LTKRNN+DFSI I NITPADAGTYYCVKFRKGSPDDVEFKSGA
Sbjct: 79  IYNQKEGHFPRVTTVSDLTKRNNMDFSIRIGNITPADAGTYYCVKFRKGSPDDVEFKSGA 138

Query: 121 GTELSVRADPA 131
           GTELSVRA P+
Sbjct: 139 GTELSVRAKPS 149


>gi|91105767 signal-regulatory protein alpha precursor [Homo
           sapiens]
          Length = 504

 Score =  230 bits (586), Expect = 3e-61
 Identities = 111/131 (84%), Positives = 120/131 (91%)

Query: 1   MTALCSFPGVAGEDELQVIQPEKSVSVAAGESATLRCAMTSLIPVGPIMWFRGAGAGREL 60
           + A C++ GVAGE+ELQVIQP+KSV VAAGE+ATLRC  TSLIPVGPI WFRGAG GREL
Sbjct: 19  LAASCAWSGVAGEEELQVIQPDKSVLVAAGETATLRCTATSLIPVGPIQWFRGAGPGREL 78

Query: 61  IYNQKEGHFPRVTTVSELTKRNNLDFSISISNITPADAGTYYCVKFRKGSPDDVEFKSGA 120
           IYNQKEGHFPRVTTVS+LTKRNN+DFSI I NITPADAGTYYCVKFRKGSPDDVEFKSGA
Sbjct: 79  IYNQKEGHFPRVTTVSDLTKRNNMDFSIRIGNITPADAGTYYCVKFRKGSPDDVEFKSGA 138

Query: 121 GTELSVRADPA 131
           GTELSVRA P+
Sbjct: 139 GTELSVRAKPS 149


>gi|91105764 signal-regulatory protein alpha precursor [Homo
           sapiens]
          Length = 504

 Score =  230 bits (586), Expect = 3e-61
 Identities = 111/131 (84%), Positives = 120/131 (91%)

Query: 1   MTALCSFPGVAGEDELQVIQPEKSVSVAAGESATLRCAMTSLIPVGPIMWFRGAGAGREL 60
           + A C++ GVAGE+ELQVIQP+KSV VAAGE+ATLRC  TSLIPVGPI WFRGAG GREL
Sbjct: 19  LAASCAWSGVAGEEELQVIQPDKSVLVAAGETATLRCTATSLIPVGPIQWFRGAGPGREL 78

Query: 61  IYNQKEGHFPRVTTVSELTKRNNLDFSISISNITPADAGTYYCVKFRKGSPDDVEFKSGA 120
           IYNQKEGHFPRVTTVS+LTKRNN+DFSI I NITPADAGTYYCVKFRKGSPDDVEFKSGA
Sbjct: 79  IYNQKEGHFPRVTTVSDLTKRNNMDFSIRIGNITPADAGTYYCVKFRKGSPDDVEFKSGA 138

Query: 121 GTELSVRADPA 131
           GTELSVRA P+
Sbjct: 139 GTELSVRAKPS 149


>gi|209529703 signal-regulatory protein beta 1 isoform 3 precursor
           [Homo sapiens]
          Length = 398

 Score =  225 bits (574), Expect = 8e-60
 Identities = 109/123 (88%), Positives = 116/123 (94%)

Query: 9   GVAGEDELQVIQPEKSVSVAAGESATLRCAMTSLIPVGPIMWFRGAGAGRELIYNQKEGH 68
           GVAGE+ELQVIQP+KS+SVAAGESATL C +TSLIPVGPI WFRGAG GRELIYNQKEGH
Sbjct: 26  GVAGEEELQVIQPDKSISVAAGESATLHCTVTSLIPVGPIQWFRGAGPGRELIYNQKEGH 85

Query: 69  FPRVTTVSELTKRNNLDFSISISNITPADAGTYYCVKFRKGSPDDVEFKSGAGTELSVRA 128
           FPRVTTVS+LTKRNN+DFSI ISNITPADAGTYYCVKFRKGSPD VEFKSGAGTELSVRA
Sbjct: 86  FPRVTTVSDLTKRNNMDFSIRISNITPADAGTYYCVKFRKGSPDHVEFKSGAGTELSVRA 145

Query: 129 DPA 131
            P+
Sbjct: 146 KPS 148


>gi|94538339 signal-regulatory protein gamma isoform 3 precursor
           [Homo sapiens]
          Length = 276

 Score =  200 bits (509), Expect = 3e-52
 Identities = 93/131 (70%), Positives = 112/131 (85%)

Query: 1   MTALCSFPGVAGEDELQVIQPEKSVSVAAGESATLRCAMTSLIPVGPIMWFRGAGAGREL 60
           +T L     VAGE+ELQ+IQPEK + V  G++ATL C +TSL+PVGP++WFRG G GREL
Sbjct: 17  LTLLLGLTEVAGEEELQMIQPEKLLLVTVGKTATLHCTVTSLLPVGPVLWFRGVGPGREL 76

Query: 61  IYNQKEGHFPRVTTVSELTKRNNLDFSISISNITPADAGTYYCVKFRKGSPDDVEFKSGA 120
           IYNQKEGHFPRVTTVS+LTKRNN+DFSI IS+ITPAD GTYYCVKFRKGSP++VEFKSG 
Sbjct: 77  IYNQKEGHFPRVTTVSDLTKRNNMDFSIRISSITPADVGTYYCVKFRKGSPENVEFKSGP 136

Query: 121 GTELSVRADPA 131
           GTE+++ A P+
Sbjct: 137 GTEMALGAKPS 147


>gi|94538335 signal-regulatory protein gamma isoform 1 precursor
           [Homo sapiens]
          Length = 387

 Score =  200 bits (509), Expect = 3e-52
 Identities = 93/131 (70%), Positives = 112/131 (85%)

Query: 1   MTALCSFPGVAGEDELQVIQPEKSVSVAAGESATLRCAMTSLIPVGPIMWFRGAGAGREL 60
           +T L     VAGE+ELQ+IQPEK + V  G++ATL C +TSL+PVGP++WFRG G GREL
Sbjct: 17  LTLLLGLTEVAGEEELQMIQPEKLLLVTVGKTATLHCTVTSLLPVGPVLWFRGVGPGREL 76

Query: 61  IYNQKEGHFPRVTTVSELTKRNNLDFSISISNITPADAGTYYCVKFRKGSPDDVEFKSGA 120
           IYNQKEGHFPRVTTVS+LTKRNN+DFSI IS+ITPAD GTYYCVKFRKGSP++VEFKSG 
Sbjct: 77  IYNQKEGHFPRVTTVSDLTKRNNMDFSIRISSITPADVGTYYCVKFRKGSPENVEFKSGP 136

Query: 121 GTELSVRADPA 131
           GTE+++ A P+
Sbjct: 137 GTEMALGAKPS 147


>gi|94538337 signal-regulatory protein gamma isoform 2 precursor
           [Homo sapiens]
          Length = 170

 Score =  197 bits (500), Expect = 3e-51
 Identities = 91/126 (72%), Positives = 109/126 (86%)

Query: 1   MTALCSFPGVAGEDELQVIQPEKSVSVAAGESATLRCAMTSLIPVGPIMWFRGAGAGREL 60
           +T L     VAGE+ELQ+IQPEK + V  G++ATL C +TSL+PVGP++WFRG G GREL
Sbjct: 17  LTLLLGLTEVAGEEELQMIQPEKLLLVTVGKTATLHCTVTSLLPVGPVLWFRGVGPGREL 76

Query: 61  IYNQKEGHFPRVTTVSELTKRNNLDFSISISNITPADAGTYYCVKFRKGSPDDVEFKSGA 120
           IYNQKEGHFPRVTTVS+LTKRNN+DFSI IS+ITPAD GTYYCVKFRKGSP++VEFKSG 
Sbjct: 77  IYNQKEGHFPRVTTVSDLTKRNNMDFSIRISSITPADVGTYYCVKFRKGSPENVEFKSGP 136

Query: 121 GTELSV 126
           GTE+++
Sbjct: 137 GTEMAL 142


>gi|239757417 PREDICTED: similar to hCG2019710 [Homo sapiens]
          Length = 651

 Score =  154 bits (388), Expect = 3e-38
 Identities = 78/118 (66%), Positives = 93/118 (78%), Gaps = 1/118 (0%)

Query: 10  VAGEDELQVIQPEKSVSVAAGESATLRCAMTSLIPVGPIMWFRGAGAGRELIYNQKEGHF 69
           VAGE ELQVIQPE  VSVAAGE ATL C +TSL+PVGPI WFRGA  G++LIY+ K  H 
Sbjct: 510 VAGE-ELQVIQPEAFVSVAAGEMATLNCTVTSLLPVGPIQWFRGACPGQKLIYSPKRCHS 568

Query: 70  PRVTTVSELTKRNNLDFSISISNITPADAGTYYCVKFRKGSPDDVEFKSGAGTELSVR 127
           PRVTT+S+  KRN+ D+SI IS+IT  DAGTYYC+K R+  P +VE KSG GT++SVR
Sbjct: 569 PRVTTISDQRKRNSTDYSIRISSITLEDAGTYYCMKLRRAIPANVEIKSGPGTQMSVR 626



 Score =  113 bits (283), Expect = 4e-26
 Identities = 60/118 (50%), Positives = 74/118 (62%), Gaps = 27/118 (22%)

Query: 9   GVAGEDELQVIQPEKSVSVAAGESATLRCAMTSLIPVGPIMWFRGAGAGRELIYNQKEGH 68
           G AGE+ELQVIQPEK                          WF+G   G+ELIY+ K GH
Sbjct: 417 GAAGEEELQVIQPEK--------------------------WFKGTETGQELIYSSKGGH 450

Query: 69  FPRVTTVSELTKRNNLDFSISISNITPADAGTYYCVKFRKGSPDDVEFKSGAGTELSV 126
           FP++  +S++TKRNN DFS+ I++IT A+ GTY CVKF KG P D+E KSG GTELSV
Sbjct: 451 FPKIACISDITKRNNTDFSMCITSITRANTGTYNCVKFWKGGP-DMELKSGPGTELSV 507


>gi|239751934 PREDICTED: hypothetical protein XP_002348043 [Homo
           sapiens]
          Length = 651

 Score =  154 bits (388), Expect = 3e-38
 Identities = 78/118 (66%), Positives = 93/118 (78%), Gaps = 1/118 (0%)

Query: 10  VAGEDELQVIQPEKSVSVAAGESATLRCAMTSLIPVGPIMWFRGAGAGRELIYNQKEGHF 69
           VAGE ELQVIQPE  VSVAAGE ATL C +TSL+PVGPI WFRGA  G++LIY+ K  H 
Sbjct: 510 VAGE-ELQVIQPEAFVSVAAGEMATLNCTVTSLLPVGPIQWFRGACPGQKLIYSPKRCHS 568

Query: 70  PRVTTVSELTKRNNLDFSISISNITPADAGTYYCVKFRKGSPDDVEFKSGAGTELSVR 127
           PRVTT+S+  KRN+ D+SI IS+IT  DAGTYYC+K R+  P +VE KSG GT++SVR
Sbjct: 569 PRVTTISDQRKRNSTDYSIRISSITLEDAGTYYCMKLRRAIPANVEIKSGPGTQMSVR 626



 Score =  113 bits (283), Expect = 4e-26
 Identities = 60/118 (50%), Positives = 74/118 (62%), Gaps = 27/118 (22%)

Query: 9   GVAGEDELQVIQPEKSVSVAAGESATLRCAMTSLIPVGPIMWFRGAGAGRELIYNQKEGH 68
           G AGE+ELQVIQPEK                          WF+G   G+ELIY+ K GH
Sbjct: 417 GAAGEEELQVIQPEK--------------------------WFKGTETGQELIYSSKGGH 450

Query: 69  FPRVTTVSELTKRNNLDFSISISNITPADAGTYYCVKFRKGSPDDVEFKSGAGTELSV 126
           FP++  +S++TKRNN DFS+ I++IT A+ GTY CVKF KG P D+E KSG GTELSV
Sbjct: 451 FPKIACISDITKRNNTDFSMCITSITRANTGTYNCVKFWKGGP-DMELKSGPGTELSV 507


>gi|239746419 PREDICTED: hypothetical protein XP_002344218 [Homo
           sapiens]
          Length = 532

 Score =  113 bits (282), Expect = 5e-26
 Identities = 59/121 (48%), Positives = 76/121 (62%), Gaps = 27/121 (22%)

Query: 9   GVAGEDELQVIQPEKSVSVAAGESATLRCAMTSLIPVGPIMWFRGAGAGRELIYNQKEGH 68
           G AGE+EL+VIQPEK                          WF+G   G+ELIY+ K GH
Sbjct: 417 GAAGEEELRVIQPEK--------------------------WFKGTETGQELIYSSKGGH 450

Query: 69  FPRVTTVSELTKRNNLDFSISISNITPADAGTYYCVKFRKGSPDDVEFKSGAGTELSVRA 128
           FP++  +S++TKRNN DFS+ I++IT A+ GTY CVKF KG P D+E KSG GTELSV +
Sbjct: 451 FPKIACISDITKRNNTDFSMCITSITRANTGTYNCVKFWKGGP-DMELKSGPGTELSVHS 509

Query: 129 D 129
           +
Sbjct: 510 E 510


>gi|30425382 signal-regulatory protein delta [Homo sapiens]
          Length = 197

 Score =  111 bits (277), Expect = 2e-25
 Identities = 55/109 (50%), Positives = 73/109 (66%), Gaps = 1/109 (0%)

Query: 18  VIQPEKSVSVAAGESATLRCAMTSLIPVGPIMWFRGAGAGRELIYNQKEGHFPRVTTVSE 77
           V Q E S +V+ GES  L C++   +P GP++WF+G G  R+LIYN K+G+FPRV  + +
Sbjct: 32  VQQTEMSQTVSTGESIILSCSVPDTLPNGPVLWFKGTGPNRKLIYNFKQGNFPRVKEIGD 91

Query: 78  LTKRNNLDFSISISNITPADAGTYYCVKFRKGSPDDVEFKSGAGTELSV 126
            TK  N DFS  I  I+ ADAGTYYCVKF KG     E++SG GT++ V
Sbjct: 92  TTKPGNTDFSTRIREISLADAGTYYCVKFIKGRAIK-EYQSGRGTQVFV 139


>gi|198386341 signal-regulatory protein beta 2 isoform 2 [Homo
           sapiens]
          Length = 244

 Score = 89.7 bits (221), Expect = 6e-19
 Identities = 49/116 (42%), Positives = 69/116 (59%), Gaps = 6/116 (5%)

Query: 13  EDELQVIQPEKSVSVAAGESATLRCAMTSLIPVGPIMWFRGAGAGRELIYNQKEGHFPRV 72
           E +L +IQP++ V    G++  L C +    P GPI WF+GAG  RE IYN      P+ 
Sbjct: 58  EPDLWIIQPQELVLGTTGDTVFLNCTVLGDGPPGPIRWFQGAGLSREAIYNFGGISHPKE 117

Query: 73  TTVSELTKRNNLDFSISISNITPADAGTYYCVKFRKGSPDDVEFKSGAGTELSVRA 128
           T V    + +N DFSI + N++  DAGTYYCVKF++    + ++ SG GT L V+A
Sbjct: 118 TAV----QASNNDFSILLQNVSSEDAGTYYCVKFQR--KPNRQYLSGQGTSLKVKA 167


>gi|171906611 signal-regulatory protein beta 2 isoform 1 [Homo
           sapiens]
          Length = 342

 Score = 89.7 bits (221), Expect = 6e-19
 Identities = 49/116 (42%), Positives = 69/116 (59%), Gaps = 6/116 (5%)

Query: 13  EDELQVIQPEKSVSVAAGESATLRCAMTSLIPVGPIMWFRGAGAGRELIYNQKEGHFPRV 72
           E +L +IQP++ V    G++  L C +    P GPI WF+GAG  RE IYN      P+ 
Sbjct: 156 EPDLWIIQPQELVLGTTGDTVFLNCTVLGDGPPGPIRWFQGAGLSREAIYNFGGISHPKE 215

Query: 73  TTVSELTKRNNLDFSISISNITPADAGTYYCVKFRKGSPDDVEFKSGAGTELSVRA 128
           T V    + +N DFSI + N++  DAGTYYCVKF++    + ++ SG GT L V+A
Sbjct: 216 TAV----QASNNDFSILLQNVSSEDAGTYYCVKFQR--KPNRQYLSGQGTSLKVKA 265



 Score = 80.1 bits (196), Expect = 5e-16
 Identities = 48/130 (36%), Positives = 69/130 (53%), Gaps = 6/130 (4%)

Query: 9   GVAGEDELQVIQPEKSVSVAAGESATLRCAMTSLIPVGPIMWFRGAGAGRELIYNQKEGH 68
           G +  ++ QV+QPE  + VA GE+  LRC +      G I W + +   ++ IYN K G 
Sbjct: 32  GQSSRNDWQVLQPEGPMLVAEGETLLLRCMVVGSCTDGMIKWVKVSTQDQQEIYNFKRGS 91

Query: 69  FPRVTTVSELTKRN-NLDFSISISNITPADAGTYYCVKFRKGSPDDVEFKSGAGTELSVR 127
           FP V  + + T    N D+SI I N+T    GTY+CV+F  G  +  E KS  GT + V+
Sbjct: 92  FPGVMPMIQRTSEPLNCDYSIYIHNVTREHTGTYHCVRF-DGLSEHSEMKSDEGTSVLVK 150

Query: 128 A----DPALW 133
                +P LW
Sbjct: 151 GAGDPEPDLW 160


>gi|239753214 PREDICTED: similar to hCG2043206 [Homo sapiens]
          Length = 157

 Score = 45.8 bits (107), Expect = 1e-05
 Identities = 30/123 (24%), Positives = 52/123 (42%), Gaps = 22/123 (17%)

Query: 15  ELQVIQPEKSVSVAAGESATLRCAMTSLIPVGPIMWFRGAGAGRELIYNQKEGHFPRVTT 74
           E+ + Q   ++S++ GE ATL C  +  +    + W           Y QK G  PR+  
Sbjct: 26  EIVMTQSPATLSLSPGERATLSCRASQSVSSSYLSW-----------YQQKPGQAPRLLI 74

Query: 75  VSELTKRNNL-----------DFSISISNITPADAGTYYCVKFRKGSPDDVEFKSGAGTE 123
               T+   +           DF+++IS++ P D   YYC +     P  ++ ++   T 
Sbjct: 75  YGASTRATGIPARFSGSGSGTDFTLTISSLQPEDFAVYYCQQDYNLPPTVIQHETKTSTR 134

Query: 124 LSV 126
            SV
Sbjct: 135 PSV 137


>gi|169163270 PREDICTED: similar to hCG2043206 [Homo sapiens]
          Length = 151

 Score = 45.8 bits (107), Expect = 1e-05
 Identities = 30/123 (24%), Positives = 52/123 (42%), Gaps = 22/123 (17%)

Query: 15  ELQVIQPEKSVSVAAGESATLRCAMTSLIPVGPIMWFRGAGAGRELIYNQKEGHFPRVTT 74
           E+ + Q   ++S++ GE ATL C  +  +    + W           Y QK G  PR+  
Sbjct: 21  EIVMTQSPATLSLSPGERATLSCRASQSVSSSYLSW-----------YQQKPGQAPRLLI 69

Query: 75  VSELTKRNNL-----------DFSISISNITPADAGTYYCVKFRKGSPDDVEFKSGAGTE 123
               T+   +           DF+++IS++ P D   YYC +     P  ++ ++   T 
Sbjct: 70  YGASTRATGIPARFSGSGSGTDFTLTISSLQPEDFAVYYCQQDYNLPPTVIQHETKTSTR 129

Query: 124 LSV 126
            SV
Sbjct: 130 PSV 132


>gi|239753212 PREDICTED: similar to hCG1686089 [Homo sapiens]
          Length = 152

 Score = 44.7 bits (104), Expect = 2e-05
 Identities = 31/126 (24%), Positives = 52/126 (41%), Gaps = 24/126 (19%)

Query: 15  ELQVIQPEKSVSVAAGESATLRCAMTSLIPVGPIMWFRGAGAGRELIYNQKEGHFPRVTT 74
           E+ + Q   ++S++ GE ATL C  +  +    + W           Y QK G  PR+  
Sbjct: 21  EIVLTQSPATLSLSPGERATLSCGASQSVSSSYLAW-----------YQQKPGLAPRLLI 69

Query: 75  VSELTKRNNL-----------DFSISISNITPADAGTYYCVKFRKGSPD--DVEFKSGAG 121
               ++   +           DF+++IS + P D   YYC ++    P    +E K+ A 
Sbjct: 70  YDASSRATGIPDRFSGSGSGTDFTLTISRLEPEDFAVYYCQQYGSSPPTVIQLETKTSAR 129

Query: 122 TELSVR 127
             L  R
Sbjct: 130 PSLFTR 135


>gi|239749464 PREDICTED: hypothetical protein XP_002347049 [Homo
           sapiens]
          Length = 152

 Score = 44.7 bits (104), Expect = 2e-05
 Identities = 31/126 (24%), Positives = 52/126 (41%), Gaps = 24/126 (19%)

Query: 15  ELQVIQPEKSVSVAAGESATLRCAMTSLIPVGPIMWFRGAGAGRELIYNQKEGHFPRVTT 74
           E+ + Q   ++S++ GE ATL C  +  +    + W           Y QK G  PR+  
Sbjct: 21  EIVLTQSPATLSLSPGERATLSCGASQSVSSSYLAW-----------YQQKPGLAPRLLI 69

Query: 75  VSELTKRNNL-----------DFSISISNITPADAGTYYCVKFRKGSPD--DVEFKSGAG 121
               ++   +           DF+++IS + P D   YYC ++    P    +E K+ A 
Sbjct: 70  YDASSRATGIPDRFSGSGSGTDFTLTISRLEPEDFAVYYCQQYGSSPPTVIQLETKTSAR 129

Query: 122 TELSVR 127
             L  R
Sbjct: 130 PSLFTR 135


>gi|239747814 PREDICTED: hypothetical protein XP_002348323 [Homo
           sapiens]
          Length = 162

 Score = 43.1 bits (100), Expect = 7e-05
 Identities = 27/92 (29%), Positives = 48/92 (52%), Gaps = 9/92 (9%)

Query: 16  LQVIQPEKSVSVAAGESATLRCAMTSLIPVGPIMWF--RGAGAGRELIY--NQKEGHFPR 71
           +Q+ QP  S+S + G+S T+ C  +       + W+  +   A + LIY  +  +   P 
Sbjct: 74  IQMTQPPSSLSASVGDSVTITCRASQSF-TNQLAWYQQKPGKAPKLLIYRVSSLQTGVPS 132

Query: 72  VTTVSELTKRNNLDFSISISNITPADAGTYYC 103
           + + SE    +  DF+++IS++ P D  TYYC
Sbjct: 133 LFSGSE----SGTDFTLTISSLQPDDVATYYC 160


>gi|169163724 PREDICTED: similar to hCG26659 [Homo sapiens]
          Length = 191

 Score = 41.6 bits (96), Expect = 2e-04
 Identities = 26/102 (25%), Positives = 47/102 (46%), Gaps = 23/102 (22%)

Query: 15  ELQVIQPEKSVSVAAGESATLRCAMTSLIPVGPIMWFRGAGAGRELIYNQKEGHFPRVTT 74
           ++QV Q   S+S + G+  T+ C  +  I  G + W           Y QK G  P +  
Sbjct: 23  DIQVTQSPSSLSASVGDRVTITCRASQGISNG-LSW-----------YQQKPGQAPTLLI 70

Query: 75  VSELTKRNNL-----------DFSISISNITPADAGTYYCVK 105
            +  + ++ +           DF+++IS++ P D  TYYC++
Sbjct: 71  YAASSLQSGVPSRFSGSGSGTDFTLTISSLQPEDVATYYCLQ 112


>gi|239747852 PREDICTED: hypothetical protein XP_002346449 [Homo
           sapiens]
          Length = 155

 Score = 41.6 bits (96), Expect = 2e-04
 Identities = 26/102 (25%), Positives = 47/102 (46%), Gaps = 23/102 (22%)

Query: 15  ELQVIQPEKSVSVAAGESATLRCAMTSLIPVGPIMWFRGAGAGRELIYNQKEGHFPRVTT 74
           ++QV Q   S+S + G+  T+ C  +  I  G + W           Y QK G  P +  
Sbjct: 23  DIQVTQSPSSLSASVGDRVTITCRASQGISNG-LSW-----------YQQKPGQAPTLLI 70

Query: 75  VSELTKRNNL-----------DFSISISNITPADAGTYYCVK 105
            +  + ++ +           DF+++IS++ P D  TYYC++
Sbjct: 71  YAASSLQSGVPSRFSGSGSGTDFTLTISSLQPEDVATYYCLQ 112


>gi|169163023 PREDICTED: similar to hCG26659 [Homo sapiens]
          Length = 191

 Score = 41.6 bits (96), Expect = 2e-04
 Identities = 26/102 (25%), Positives = 47/102 (46%), Gaps = 23/102 (22%)

Query: 15  ELQVIQPEKSVSVAAGESATLRCAMTSLIPVGPIMWFRGAGAGRELIYNQKEGHFPRVTT 74
           ++QV Q   S+S + G+  T+ C  +  I  G + W           Y QK G  P +  
Sbjct: 23  DIQVTQSPSSLSASVGDRVTITCRASQGISNG-LSW-----------YQQKPGQAPTLLI 70

Query: 75  VSELTKRNNL-----------DFSISISNITPADAGTYYCVK 105
            +  + ++ +           DF+++IS++ P D  TYYC++
Sbjct: 71  YAASSLQSGVPSRFSGSGSGTDFTLTISSLQPEDVATYYCLQ 112


>gi|6453813 butyrophilin, subfamily 2, member A2 isoform a [Homo
           sapiens]
          Length = 523

 Score = 38.9 bits (89), Expect = 0.001
 Identities = 34/136 (25%), Positives = 58/136 (42%), Gaps = 19/136 (13%)

Query: 15  ELQVIQPEKSVSVAAGESATLRCAMT--SLIPVGPIMWFRGA--------GAGRELIYNQ 64
           +  V+ P   +    GE+ TLRC ++         + WFR            GRE    Q
Sbjct: 33  QFTVVGPANPILAMVGENTTLRCHLSPEKNAEDMEVRWFRSQFSPAVFVYKGGRERTEEQ 92

Query: 65  KEGHFPRVTTVSELTKRNNLDFSISISNITPADAGTYYCVKFRKGSPDDVEFK---SGAG 121
            E +  R+T VS+   R ++  ++ I N+T  + G Y C      S D+   +   +G G
Sbjct: 93  MEEYRGRITFVSKDINRGSV--ALVIHNVTAQENGIYRCYFQEGRSYDEAILRLVVAGLG 150

Query: 122 T----ELSVRADPALW 133
           +    E+  + D ++W
Sbjct: 151 SKPLIEIKAQEDGSIW 166


>gi|5921461 butyrophilin, subfamily 2, member A1 isoform 1 precursor
           [Homo sapiens]
          Length = 527

 Score = 38.5 bits (88), Expect = 0.002
 Identities = 32/106 (30%), Positives = 47/106 (44%), Gaps = 13/106 (12%)

Query: 18  VIQPEKSVSVAAGESATLRCAMT--SLIPVGPIMWFRGA--------GAGRELIYNQKEG 67
           V+ P   +    GE+ TLRC ++         + WFR            GRE    Q E 
Sbjct: 32  VVGPTDPILATVGENTTLRCHLSPEKNAEDMEVRWFRSQFSPAVFVYKGGRERTEEQMEE 91

Query: 68  HFPRVTTVSELTKRNNLDFSISISNITPADAGTYYCVKFRKGSPDD 113
           +  R T VS+   R ++  ++ I NIT  + GTY C  F++G   D
Sbjct: 92  YRGRTTFVSKDISRGSV--ALVIHNITAQENGTYRCY-FQEGRSYD 134


>gi|17975772 butyrophilin, subfamily 2, member A1 isoform 2
           precursor [Homo sapiens]
          Length = 334

 Score = 38.5 bits (88), Expect = 0.002
 Identities = 32/106 (30%), Positives = 47/106 (44%), Gaps = 13/106 (12%)

Query: 18  VIQPEKSVSVAAGESATLRCAMT--SLIPVGPIMWFRGA--------GAGRELIYNQKEG 67
           V+ P   +    GE+ TLRC ++         + WFR            GRE    Q E 
Sbjct: 32  VVGPTDPILATVGENTTLRCHLSPEKNAEDMEVRWFRSQFSPAVFVYKGGRERTEEQMEE 91

Query: 68  HFPRVTTVSELTKRNNLDFSISISNITPADAGTYYCVKFRKGSPDD 113
           +  R T VS+   R ++  ++ I NIT  + GTY C  F++G   D
Sbjct: 92  YRGRTTFVSKDISRGSV--ALVIHNITAQENGTYRCY-FQEGRSYD 134


>gi|239755286 PREDICTED: similar to hCG1742442 [Homo sapiens]
          Length = 296

 Score = 38.1 bits (87), Expect = 0.002
 Identities = 25/108 (23%), Positives = 48/108 (44%), Gaps = 23/108 (21%)

Query: 15  ELQVIQPEKSVSVAAGESATLRCAMTSLIPVGPIMWFRGAGAGRELIYNQKEGHFPRVTT 74
           ++Q+ Q   S+S + G+  T+ C  +  I    + W           Y QK G  P++  
Sbjct: 194 DIQMTQSPSSLSASVGDRVTITCRASQGIS-NNLNW-----------YQQKPGKTPKLLI 241

Query: 75  VSELTKRNNL-----------DFSISISNITPADAGTYYCVKFRKGSP 111
            +  + ++ +           D++++IS++ P D  TYYC +    SP
Sbjct: 242 YAASSLQSGIPSRFSDSGSGTDYTLTISSLQPEDFATYYCQQSDSTSP 289


>gi|169194776 PREDICTED: similar to hCG1742442 [Homo sapiens]
          Length = 242

 Score = 38.1 bits (87), Expect = 0.002
 Identities = 25/108 (23%), Positives = 48/108 (44%), Gaps = 23/108 (21%)

Query: 15  ELQVIQPEKSVSVAAGESATLRCAMTSLIPVGPIMWFRGAGAGRELIYNQKEGHFPRVTT 74
           ++Q+ Q   S+S + G+  T+ C  +  I    + W           Y QK G  P++  
Sbjct: 140 DIQMTQSPSSLSASVGDRVTITCRASQGIS-NNLNW-----------YQQKPGKTPKLLI 187

Query: 75  VSELTKRNNL-----------DFSISISNITPADAGTYYCVKFRKGSP 111
            +  + ++ +           D++++IS++ P D  TYYC +    SP
Sbjct: 188 YAASSLQSGIPSRFSDSGSGTDYTLTISSLQPEDFATYYCQQSDSTSP 235


  Database: hs.faa
    Posted date:  Aug 4, 2009  4:42 PM
  Number of letters in database: 18,247,518
  Number of sequences in database:  37,866
  
Lambda     K      H
   0.318    0.134    0.404 

Gapped
Lambda     K      H
   0.267   0.0410    0.140 


Matrix: BLOSUM62
Gap Penalties: Existence: 11, Extension: 1
Number of Hits to DB: 5,345,767
Number of Sequences: 37866
Number of extensions: 209641
Number of successful extensions: 1217
Number of sequences better than 10.0: 30
Number of HSP's better than 10.0 without gapping: 85
Number of HSP's successfully gapped in prelim test: 133
Number of HSP's that attempted gapping in prelim test: 896
Number of HSP's gapped (non-prelim): 434
length of query: 136
length of database: 18,247,518
effective HSP length: 91
effective length of query: 45
effective length of database: 14,801,712
effective search space: 666077040
effective search space used: 666077040
T: 11
A: 40
X1: 16 ( 7.3 bits)
X2: 38 (14.6 bits)
X3: 64 (24.7 bits)
S1: 41 (21.7 bits)
S2: 56 (26.2 bits)

Search results were obtained with NCBI BLAST and RefSeq entries.


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Guide to the Human Genome
Copyright © 2010 by Stewart Scherer. All rights reserved.

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