Guide to the Human Genome
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Name: SIRPG Sequence: fasta or formatted (170aa) NCBI GI: 94538337
Description:

signal-regulatory protein gamma isoform 2 precursor

Referenced in:

Additional Genes in Development
Receptor Tyrosine Kinases

Other entries for this name:
alt prot [387aa] signal-regulatory protein gamma isoform 1 precursor
alt prot [276aa] signal-regulatory protein gamma isoform 3 precursor
Composition:

amino acid map
 Amino acid        Percentage    Count  Longest homopolymer
 A alanine             4.7          8           1
 C cysteine            1.2          2           1
 D aspartate           1.8          3           1
 E glutamate           5.9         10           3
 F phenylalanine       3.5          6           1
 G glycine             9.4         16           2
 H histidine           1.8          3           1
 I isoleucine          4.1          7           1
 K lysine              5.3          9           1
 L leucine            14.1         24           3
 M methionine          2.4          4           1
 N asparagine          2.4          4           2
 P proline            10.0         17           2
 Q glutamine           2.4          4           1
 R arginine            3.5          6           1
 S serine              5.9         10           2
 T threonine           8.8         15           2
 V valine              8.8         15           1
 W tryptophan          1.8          3           1
 Y tyrosine            2.4          4           2
Comparative genomics:

Search single species RefSeq proteins at NCBI
   H. sapiens
   M. musculus
   D. rerio
   C. intestinalis
   S. purpuratus
   D. melanogaster
   C. elegans
   A. thaliana
   S. cerevisiae
   E. coli W3110
   A. pernix K1

Search summary

comparative genomics plot

   Figure data

Additional searches of
RefSeq proteins at NCBI

   All
   Eukaryotes
   Bacteria
   Archaea
   Viruses
   Primates
   Mammals
   Vertebrates

Related human proteins:
Protein          Relative score         Description

Self-match            1.000   signal-regulatory protein gamma isoform 2 precursor ... 
SIRPG                 0.845   signal-regulatory protein gamma isoform 3 precursor ...
SIRPG                 0.845   signal-regulatory protein gamma isoform 1 precursor ...
SIRPB1                0.709   signal-regulatory protein beta 1 isoform 2 precurso...
SIRPB1                0.687   signal-regulatory protein beta 1 isoform 3 precurso...
SIRPB1                0.647   signal-regulatory protein beta 1 isoform 1 precurso...
SIRPA                 0.563   signal-regulatory protein alpha precursor 
SIRPA                 0.563   signal-regulatory protein alpha precursor 
SIRPA                 0.563   signal-regulatory protein alpha precursor 
LOC654056             0.539   PREDICTED: similar to signal-regulatory protein bet...
LOC654056             0.533   PREDICTED: similar to signal-regulatory protein bet...
LOC100294049          0.430   PREDICTED: similar to hCG2019710 
LOC100291000          0.430   PREDICTED: hypothetical protein XP_002348043 
SIRPD                 0.341   signal-regulatory protein delta 
LOC100289473          0.272   PREDICTED: hypothetical protein XP_002344218 
SIRPB2                0.214   signal-regulatory protein beta 2 isoform 2 
SIRPB2                0.204   signal-regulatory protein beta 2 isoform 1 
LOC100291682          0.068   PREDICTED: similar to hCG1686089 
LOC100290992          0.068   PREDICTED: hypothetical protein XP_002347049 
LOC440871             0.065   PREDICTED: similar to hCG2043206 
LOC100291786          0.062   PREDICTED: similar to hCG2043206 
LOC100291027          0.053   PREDICTED: hypothetical protein XP_002348323 
BTN2A1                0.043   butyrophilin, subfamily 2, member A1 isoform 1 precur...
BTN2A1                0.043   butyrophilin, subfamily 2, member A1 isoform 2 precu...
LOC100130100          0.040   PREDICTED: similar to hCG26659 
LOC100291464          0.040   PREDICTED: hypothetical protein XP_002346449 
LOC100130100          0.040   PREDICTED: similar to hCG26659 
LOC652493             0.034   PREDICTED: similar to pre-B lymphocyte gene 1 [Homo...
VSIG2                 0.034   V-set and immunoglobulin domain containing 2 
LOC642424             0.031   PREDICTED: similar to hCG1742442 
Human BLASTP results (used to prepare the table)

Gene descriptions are from NCBI RefSeq. Search results were obtained with NCBI BLAST and RefSeq entries. When identical proteins are present, the self-match may not be listed first in BLASTP output. In such cases, the table above has been reordered to place it first.

See About the Figures for the scoring system used in the figure above right. The same scoring system was used in the table of BLASTP results.


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Guide to the Human Genome
Copyright © 2010 by Stewart Scherer. All rights reserved.

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