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Search of human proteins with 118572588
BLASTP 2.2.11 [Jun-05-2005]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= gi|118572588 cyclin F [Homo sapiens]
(786 letters)
Database: hs.faa
37,866 sequences; 18,247,518 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
gi|118572588 cyclin F [Homo sapiens] 1593 0.0
gi|161377472 cyclin A1 isoform c [Homo sapiens] 112 1e-24
gi|161377470 cyclin A1 isoform c [Homo sapiens] 112 1e-24
gi|161377468 cyclin A1 isoform b [Homo sapiens] 112 1e-24
gi|4502611 cyclin A1 isoform a [Homo sapiens] 112 1e-24
gi|4502613 cyclin A [Homo sapiens] 107 4e-23
gi|90669307 cyclin B3 isoform 3 [Homo sapiens] 90 7e-18
gi|14327896 cyclin B1 [Homo sapiens] 89 2e-17
gi|4757930 cyclin B2 [Homo sapiens] 82 2e-15
gi|16306525 cyclin B3 isoform 1 [Homo sapiens] 71 3e-12
gi|242247025 cyclin N-terminal domain containing 2 isoform 2 [Ho... 71 4e-12
gi|4502617 cyclin D2 [Homo sapiens] 62 3e-09
gi|16950655 cyclin D1 [Homo sapiens] 60 1e-08
gi|17318565 cyclin E2 [Homo sapiens] 52 2e-06
gi|153791755 cyclin domain containing [Homo sapiens] 50 8e-06
gi|17318559 cyclin E1 isoform 1 [Homo sapiens] 49 2e-05
gi|17318561 cyclin E1 isoform 2 [Homo sapiens] 49 2e-05
gi|197276674 cyclin J isoform 1 [Homo sapiens] 49 2e-05
gi|4502619 cyclin D3 isoform 2 [Homo sapiens] 42 0.002
gi|40254889 cyclin J isoform 2 [Homo sapiens] 40 0.008
gi|197276676 cyclin J isoform 3 [Homo sapiens] 40 0.011
gi|6005926 U2 (RNU2) small nuclear RNA auxiliary factor 2 isofor... 39 0.014
gi|61966703 NHS-like 2 [Homo sapiens] 39 0.019
gi|222418647 mucin 7, secreted precursor [Homo sapiens] 37 0.054
gi|222418649 mucin 7, secreted precursor [Homo sapiens] 37 0.054
gi|222418645 mucin 7, secreted precursor [Homo sapiens] 37 0.054
gi|187608312 cyclin N-terminal domain containing 1 [Homo sapiens] 37 0.071
gi|5031767 heat shock transcription factor 1 [Homo sapiens] 36 0.12
gi|5031703 Ras-GTPase-activating protein SH3-domain-binding prot... 36 0.16
gi|38327552 Ras-GTPase-activating protein SH3-domain-binding pro... 36 0.16
>gi|118572588 cyclin F [Homo sapiens]
Length = 786
Score = 1593 bits (4124), Expect = 0.0
Identities = 786/786 (100%), Positives = 786/786 (100%)
Query: 1 MGSGGVVHCRCAKCFCYPTKRRIRRRPRNLTILSLPEDVLFHILKWLSVEDILAVRAVHS 60
MGSGGVVHCRCAKCFCYPTKRRIRRRPRNLTILSLPEDVLFHILKWLSVEDILAVRAVHS
Sbjct: 1 MGSGGVVHCRCAKCFCYPTKRRIRRRPRNLTILSLPEDVLFHILKWLSVEDILAVRAVHS 60
Query: 61 QLKDLVDNHASVWACASFQELWPSPGNLKLFERAAEKGNFEAAVKLGIAYLYNEGLSVSD 120
QLKDLVDNHASVWACASFQELWPSPGNLKLFERAAEKGNFEAAVKLGIAYLYNEGLSVSD
Sbjct: 61 QLKDLVDNHASVWACASFQELWPSPGNLKLFERAAEKGNFEAAVKLGIAYLYNEGLSVSD 120
Query: 121 EARAEVNGLKASRFFSLAERLNVGAAPFIWLFIRPPWSVSGSCCKAVVHESLRAECQLQR 180
EARAEVNGLKASRFFSLAERLNVGAAPFIWLFIRPPWSVSGSCCKAVVHESLRAECQLQR
Sbjct: 121 EARAEVNGLKASRFFSLAERLNVGAAPFIWLFIRPPWSVSGSCCKAVVHESLRAECQLQR 180
Query: 181 THKASILHCLGRVLSLFEDEEKQQQAHDLFEEAAHQGCLTSSYLLWESDRRTDVSDPGRC 240
THKASILHCLGRVLSLFEDEEKQQQAHDLFEEAAHQGCLTSSYLLWESDRRTDVSDPGRC
Sbjct: 181 THKASILHCLGRVLSLFEDEEKQQQAHDLFEEAAHQGCLTSSYLLWESDRRTDVSDPGRC 240
Query: 241 LHSFRKLRDYAAKGCWEAQLSLAKACANANQLGLEVRASSEIVCQLFQASQAVSKQQVFS 300
LHSFRKLRDYAAKGCWEAQLSLAKACANANQLGLEVRASSEIVCQLFQASQAVSKQQVFS
Sbjct: 241 LHSFRKLRDYAAKGCWEAQLSLAKACANANQLGLEVRASSEIVCQLFQASQAVSKQQVFS 300
Query: 301 VQKGLNDTMRYILIDWLVEVATMKDFTSLCLHLTVECVDRYLRRRLVPRYRLQLLGIACM 360
VQKGLNDTMRYILIDWLVEVATMKDFTSLCLHLTVECVDRYLRRRLVPRYRLQLLGIACM
Sbjct: 301 VQKGLNDTMRYILIDWLVEVATMKDFTSLCLHLTVECVDRYLRRRLVPRYRLQLLGIACM 360
Query: 361 VICTRFISKEILTIREAVWLTDNTYKYEDLVRMMGEIVSALEGKIRVPTVVDYKEVLLTL 420
VICTRFISKEILTIREAVWLTDNTYKYEDLVRMMGEIVSALEGKIRVPTVVDYKEVLLTL
Sbjct: 361 VICTRFISKEILTIREAVWLTDNTYKYEDLVRMMGEIVSALEGKIRVPTVVDYKEVLLTL 420
Query: 421 VPVELRTQHLCSFLCELSLLHTSLSAYAPARLAAAALLLARLTHGQTQPWTTQLWDLTGF 480
VPVELRTQHLCSFLCELSLLHTSLSAYAPARLAAAALLLARLTHGQTQPWTTQLWDLTGF
Sbjct: 421 VPVELRTQHLCSFLCELSLLHTSLSAYAPARLAAAALLLARLTHGQTQPWTTQLWDLTGF 480
Query: 481 SYEDLIPCVLSLHKKCFHDDAPKDYRQVSLTAVKQRFEDKRYGEISQEEVLSYSQLCAAL 540
SYEDLIPCVLSLHKKCFHDDAPKDYRQVSLTAVKQRFEDKRYGEISQEEVLSYSQLCAAL
Sbjct: 481 SYEDLIPCVLSLHKKCFHDDAPKDYRQVSLTAVKQRFEDKRYGEISQEEVLSYSQLCAAL 540
Query: 541 GVTQDSPDPPTFLSTGEIHAFLSSPSGRRTKRKRENSLQEDRGSFVTTPTAELSSQEETL 600
GVTQDSPDPPTFLSTGEIHAFLSSPSGRRTKRKRENSLQEDRGSFVTTPTAELSSQEETL
Sbjct: 541 GVTQDSPDPPTFLSTGEIHAFLSSPSGRRTKRKRENSLQEDRGSFVTTPTAELSSQEETL 600
Query: 601 LGSFLDWSLDCCSGYEGDQESEGEKEGDVTAPSGILDVTVVYLNPEQHCCQESSDEEACP 660
LGSFLDWSLDCCSGYEGDQESEGEKEGDVTAPSGILDVTVVYLNPEQHCCQESSDEEACP
Sbjct: 601 LGSFLDWSLDCCSGYEGDQESEGEKEGDVTAPSGILDVTVVYLNPEQHCCQESSDEEACP 660
Query: 661 EDKGPQDPQALALDTQIPATPGPKPLVRTSREPGKDVTTSGYSSVSTASPTSSVDGGLGA 720
EDKGPQDPQALALDTQIPATPGPKPLVRTSREPGKDVTTSGYSSVSTASPTSSVDGGLGA
Sbjct: 661 EDKGPQDPQALALDTQIPATPGPKPLVRTSREPGKDVTTSGYSSVSTASPTSSVDGGLGA 720
Query: 721 LPQPTSVLSLDSDSHTQPCHHQARKSCLQCRPPSPPESSVPQQQVKRINLCIHSEEEDMN 780
LPQPTSVLSLDSDSHTQPCHHQARKSCLQCRPPSPPESSVPQQQVKRINLCIHSEEEDMN
Sbjct: 721 LPQPTSVLSLDSDSHTQPCHHQARKSCLQCRPPSPPESSVPQQQVKRINLCIHSEEEDMN 780
Query: 781 LGLVRL 786
LGLVRL
Sbjct: 781 LGLVRL 786
>gi|161377472 cyclin A1 isoform c [Homo sapiens]
Length = 421
Score = 112 bits (281), Expect = 1e-24
Identities = 91/333 (27%), Positives = 153/333 (45%), Gaps = 20/333 (6%)
Query: 200 EEKQQQAHDLFEEAAHQG----CLTSSYLLWESDRRTDVSDPGRCLHSFRKLRDYAAKGC 255
+E +Q D++ + QG C + +E D LH L D+
Sbjct: 84 QEPPKQGFDIYMDELEQGDRDSCSVREGMAFEDVYEVDTGTLKSDLHF---LLDFNTVSP 140
Query: 256 WEAQLSLAKACANANQLGLEVRASSEIVCQLFQASQAVS-----KQQVFSVQKGLNDTMR 310
SL + + LG +V +E +++Q + K Q + + MR
Sbjct: 141 MLVDSSLLSQSEDISSLGTDVINVTEYAEEIYQYLREAEIRHRPKAHYMKKQPDITEGMR 200
Query: 311 YILIDWLVEVATMKDFTSLCLHLTVECVDRYLRRRLVPRYRLQLLGIACMVICTRFISKE 370
IL+DWLVEV + L+L V +DR+L V R +LQL+G A M++ +++
Sbjct: 201 TILVDWLVEVGEEYKLRAETLYLAVNFLDRFLSCMSVLRGKLQLVGTAAMLLASKYEEIY 260
Query: 371 ILTIREAVWLTDNTYKYEDLVRMMGEIVSALEGKIRVPTVVDYKEVLLTLVPVELRTQHL 430
+ E V++TD+TY L++M ++ L + VPT + L V +RT++L
Sbjct: 261 PPEVDEFVYITDDTYTKRQLLKMEHLLLKVLAFDLTVPTTNQFLLQYLRRQGVCVRTENL 320
Query: 431 CSFLCELSLLHTS-LSAYAPARLAAAALLLARLTHGQTQPWTTQLWDLTGFSYEDLIPCV 489
++ ELSLL Y P+ +AAAA LA T + W L TG+S +++PC+
Sbjct: 321 AKYVAELSLLEADPFLKYLPSLIAAAAFCLANYTVNK-HFWPETLAAFTGYSLSEIVPCL 379
Query: 490 LSLHKKCFHDDAPKDYRQVSLTAVKQRFEDKRY 522
LHK + D P +Q A++++++ +Y
Sbjct: 380 SELHKA--YLDIPHRPQQ----AIREKYKASKY 406
>gi|161377470 cyclin A1 isoform c [Homo sapiens]
Length = 421
Score = 112 bits (281), Expect = 1e-24
Identities = 91/333 (27%), Positives = 153/333 (45%), Gaps = 20/333 (6%)
Query: 200 EEKQQQAHDLFEEAAHQG----CLTSSYLLWESDRRTDVSDPGRCLHSFRKLRDYAAKGC 255
+E +Q D++ + QG C + +E D LH L D+
Sbjct: 84 QEPPKQGFDIYMDELEQGDRDSCSVREGMAFEDVYEVDTGTLKSDLHF---LLDFNTVSP 140
Query: 256 WEAQLSLAKACANANQLGLEVRASSEIVCQLFQASQAVS-----KQQVFSVQKGLNDTMR 310
SL + + LG +V +E +++Q + K Q + + MR
Sbjct: 141 MLVDSSLLSQSEDISSLGTDVINVTEYAEEIYQYLREAEIRHRPKAHYMKKQPDITEGMR 200
Query: 311 YILIDWLVEVATMKDFTSLCLHLTVECVDRYLRRRLVPRYRLQLLGIACMVICTRFISKE 370
IL+DWLVEV + L+L V +DR+L V R +LQL+G A M++ +++
Sbjct: 201 TILVDWLVEVGEEYKLRAETLYLAVNFLDRFLSCMSVLRGKLQLVGTAAMLLASKYEEIY 260
Query: 371 ILTIREAVWLTDNTYKYEDLVRMMGEIVSALEGKIRVPTVVDYKEVLLTLVPVELRTQHL 430
+ E V++TD+TY L++M ++ L + VPT + L V +RT++L
Sbjct: 261 PPEVDEFVYITDDTYTKRQLLKMEHLLLKVLAFDLTVPTTNQFLLQYLRRQGVCVRTENL 320
Query: 431 CSFLCELSLLHTS-LSAYAPARLAAAALLLARLTHGQTQPWTTQLWDLTGFSYEDLIPCV 489
++ ELSLL Y P+ +AAAA LA T + W L TG+S +++PC+
Sbjct: 321 AKYVAELSLLEADPFLKYLPSLIAAAAFCLANYTVNK-HFWPETLAAFTGYSLSEIVPCL 379
Query: 490 LSLHKKCFHDDAPKDYRQVSLTAVKQRFEDKRY 522
LHK + D P +Q A++++++ +Y
Sbjct: 380 SELHKA--YLDIPHRPQQ----AIREKYKASKY 406
>gi|161377468 cyclin A1 isoform b [Homo sapiens]
Length = 464
Score = 112 bits (281), Expect = 1e-24
Identities = 91/333 (27%), Positives = 153/333 (45%), Gaps = 20/333 (6%)
Query: 200 EEKQQQAHDLFEEAAHQG----CLTSSYLLWESDRRTDVSDPGRCLHSFRKLRDYAAKGC 255
+E +Q D++ + QG C + +E D LH L D+
Sbjct: 127 QEPPKQGFDIYMDELEQGDRDSCSVREGMAFEDVYEVDTGTLKSDLHF---LLDFNTVSP 183
Query: 256 WEAQLSLAKACANANQLGLEVRASSEIVCQLFQASQAVS-----KQQVFSVQKGLNDTMR 310
SL + + LG +V +E +++Q + K Q + + MR
Sbjct: 184 MLVDSSLLSQSEDISSLGTDVINVTEYAEEIYQYLREAEIRHRPKAHYMKKQPDITEGMR 243
Query: 311 YILIDWLVEVATMKDFTSLCLHLTVECVDRYLRRRLVPRYRLQLLGIACMVICTRFISKE 370
IL+DWLVEV + L+L V +DR+L V R +LQL+G A M++ +++
Sbjct: 244 TILVDWLVEVGEEYKLRAETLYLAVNFLDRFLSCMSVLRGKLQLVGTAAMLLASKYEEIY 303
Query: 371 ILTIREAVWLTDNTYKYEDLVRMMGEIVSALEGKIRVPTVVDYKEVLLTLVPVELRTQHL 430
+ E V++TD+TY L++M ++ L + VPT + L V +RT++L
Sbjct: 304 PPEVDEFVYITDDTYTKRQLLKMEHLLLKVLAFDLTVPTTNQFLLQYLRRQGVCVRTENL 363
Query: 431 CSFLCELSLLHTS-LSAYAPARLAAAALLLARLTHGQTQPWTTQLWDLTGFSYEDLIPCV 489
++ ELSLL Y P+ +AAAA LA T + W L TG+S +++PC+
Sbjct: 364 AKYVAELSLLEADPFLKYLPSLIAAAAFCLANYTVNK-HFWPETLAAFTGYSLSEIVPCL 422
Query: 490 LSLHKKCFHDDAPKDYRQVSLTAVKQRFEDKRY 522
LHK + D P +Q A++++++ +Y
Sbjct: 423 SELHKA--YLDIPHRPQQ----AIREKYKASKY 449
>gi|4502611 cyclin A1 isoform a [Homo sapiens]
Length = 465
Score = 112 bits (281), Expect = 1e-24
Identities = 91/333 (27%), Positives = 153/333 (45%), Gaps = 20/333 (6%)
Query: 200 EEKQQQAHDLFEEAAHQG----CLTSSYLLWESDRRTDVSDPGRCLHSFRKLRDYAAKGC 255
+E +Q D++ + QG C + +E D LH L D+
Sbjct: 128 QEPPKQGFDIYMDELEQGDRDSCSVREGMAFEDVYEVDTGTLKSDLHF---LLDFNTVSP 184
Query: 256 WEAQLSLAKACANANQLGLEVRASSEIVCQLFQASQAVS-----KQQVFSVQKGLNDTMR 310
SL + + LG +V +E +++Q + K Q + + MR
Sbjct: 185 MLVDSSLLSQSEDISSLGTDVINVTEYAEEIYQYLREAEIRHRPKAHYMKKQPDITEGMR 244
Query: 311 YILIDWLVEVATMKDFTSLCLHLTVECVDRYLRRRLVPRYRLQLLGIACMVICTRFISKE 370
IL+DWLVEV + L+L V +DR+L V R +LQL+G A M++ +++
Sbjct: 245 TILVDWLVEVGEEYKLRAETLYLAVNFLDRFLSCMSVLRGKLQLVGTAAMLLASKYEEIY 304
Query: 371 ILTIREAVWLTDNTYKYEDLVRMMGEIVSALEGKIRVPTVVDYKEVLLTLVPVELRTQHL 430
+ E V++TD+TY L++M ++ L + VPT + L V +RT++L
Sbjct: 305 PPEVDEFVYITDDTYTKRQLLKMEHLLLKVLAFDLTVPTTNQFLLQYLRRQGVCVRTENL 364
Query: 431 CSFLCELSLLHTS-LSAYAPARLAAAALLLARLTHGQTQPWTTQLWDLTGFSYEDLIPCV 489
++ ELSLL Y P+ +AAAA LA T + W L TG+S +++PC+
Sbjct: 365 AKYVAELSLLEADPFLKYLPSLIAAAAFCLANYTVNK-HFWPETLAAFTGYSLSEIVPCL 423
Query: 490 LSLHKKCFHDDAPKDYRQVSLTAVKQRFEDKRY 522
LHK + D P +Q A++++++ +Y
Sbjct: 424 SELHKA--YLDIPHRPQQ----AIREKYKASKY 450
>gi|4502613 cyclin A [Homo sapiens]
Length = 432
Score = 107 bits (267), Expect = 4e-23
Identities = 72/227 (31%), Positives = 120/227 (52%), Gaps = 9/227 (3%)
Query: 302 QKGLNDTMRYILIDWLVEVATMKDFTSLCLHLTVECVDRYLRRRLVPRYRLQLLGIACMV 361
Q + ++MR IL+DWLVEV + LHL V +DR+L V R +LQL+G A M+
Sbjct: 203 QPDITNSMRAILVDWLVEVGEEYKLQNETLHLAVNYIDRFLSSMSVLRGKLQLVGTAAML 262
Query: 362 ICTRFISKEILTIREAVWLTDNTYKYEDLVRMMGEIVSALEGKIRVPTVVDY-KEVLLTL 420
+ ++F + E V++TD+TY + ++RM ++ L + PTV + + L
Sbjct: 263 LASKFEEIYPPEVAEFVYITDDTYTKKQVLRMEHLVLKVLTFDLAAPTVNQFLTQYFLHQ 322
Query: 421 VPVELRTQHLCSFLCELSLLHTS-LSAYAPARLAAAALLLARLTHGQTQPWTTQLWDLTG 479
P + + L FL ELSL+ Y P+ +A AA LA T Q W L TG
Sbjct: 323 QPANCKVESLAMFLGELSLIDADPYLKYLPSVIAGAAFHLALYT-VTGQSWPESLIRKTG 381
Query: 480 FSYEDLIPCVLSLHKKCFHDDAPKDYRQVSLTAVKQRFEDKRYGEIS 526
++ E L PC++ LH+ + AP+ +Q ++++++++ +Y +S
Sbjct: 382 YTLESLKPCLMDLHQT--YLKAPQHAQQ----SIREKYKNSKYHGVS 422
>gi|90669307 cyclin B3 isoform 3 [Homo sapiens]
Length = 1395
Score = 90.1 bits (222), Expect = 7e-18
Identities = 56/190 (29%), Positives = 96/190 (50%), Gaps = 1/190 (0%)
Query: 305 LNDTMRYILIDWLVEVATMKDFTSLCLHLTVECVDRYLRRRLVPRYRLQLLGIACMVICT 364
+ MR IL+DWLVEV + T L+L V+ VD YL + + + +LQLLG +I
Sbjct: 1156 ITSDMRAILVDWLVEVQVSFEMTHETLYLAVKLVDLYLMKAVCKKDKLQLLGATAFMIAA 1215
Query: 365 RFISKEILTIREAVWLTDNTYKYEDLVRMMGEIVSALEGKIRVPTVVDYKEVLLTLVPVE 424
+F + + V++ D+ Y+ +++ M I++ L+ I +P + +
Sbjct: 1216 KFEEHNSPRVDDFVYICDDNYQRSEVLSMEINILNVLKCDINIPIAYHFLRRYARCIHTN 1275
Query: 425 LRTQHLCSFLCELSLLHTSLSAYAPARLAAAALLLARLTHGQTQPWTTQLWDLTGFSYED 484
++T L ++CE++L ++LAAA+LLLA L + W L +G+S +
Sbjct: 1276 MKTLTLSRYICEMTLQEYHYVQEKASKLAAASLLLA-LYMKKLGYWVPFLEHYSGYSISE 1334
Query: 485 LIPCVLSLHK 494
L P V L+K
Sbjct: 1335 LHPLVRQLNK 1344
>gi|14327896 cyclin B1 [Homo sapiens]
Length = 433
Score = 89.0 bits (219), Expect = 2e-17
Identities = 60/228 (26%), Positives = 112/228 (49%), Gaps = 9/228 (3%)
Query: 273 GLEVRASSEIVCQLFQASQAVSKQQV----FSVQKGLNDTMRYILIDWLVEVATMKDFTS 328
G + SE V ++ + + ++Q + + + + MR ILIDWLV+V
Sbjct: 161 GADPNLCSEYVKDIYAYLRQLEEEQAVRPKYLLGREVTGNMRAILIDWLVQVQMKFRLLQ 220
Query: 329 LCLHLTVECVDRYLRRRLVPRYRLQLLGIACMVICTRFISKEILTIREAVWLTDNTYKYE 388
+++TV +DR+++ VP+ LQL+G+ M I +++ I + ++TDNTY
Sbjct: 221 ETMYMTVSIIDRFMQNNCVPKKMLQLVGVTAMFIASKYEEMYPPEIGDFAFVTDNTYTKH 280
Query: 389 DLVRMMGEIVSALEGKIRVPTVVDYKEVLLTLVPVELRTQHLCSFLCELSLLHTSLSAYA 448
+ +M +I+ AL + P + + + V++ L +L EL++L + +
Sbjct: 281 QIRQMEMKILRALNFGLGRPLPLHFLRRASKIGEVDVEQHTLAKYLMELTMLDYDMVHFP 340
Query: 449 PARLAAAALLLAR--LTHGQTQPWTTQLWDLTGFSYEDLIPCVLSLHK 494
P+++AA A LA L +G+ WT L ++ E L+P + L K
Sbjct: 341 PSQIAAGAFCLALKILDNGE---WTPTLQHYLSYTEESLLPVMQHLAK 385
>gi|4757930 cyclin B2 [Homo sapiens]
Length = 398
Score = 82.0 bits (201), Expect = 2e-15
Identities = 51/192 (26%), Positives = 100/192 (52%), Gaps = 1/192 (0%)
Query: 303 KGLNDTMRYILIDWLVEVATMKDFTSLCLHLTVECVDRYLRRRLVPRYRLQLLGIACMVI 362
+ +N MR IL+DWLV+V + L++ V +DR+L+ + V R +LQL+GI +++
Sbjct: 159 RDINGRMRAILVDWLVQVHSKFRLLQETLYMCVGIMDRFLQVQPVSRKKLQLVGITALLL 218
Query: 363 CTRFISKEILTIREAVWLTDNTYKYEDLVRMMGEIVSALEGKIRVPTVVDYKEVLLTLVP 422
+++ I + V++TDN Y + M I+ L+ ++ P + +
Sbjct: 219 ASKYEEMFSPNIEDFVYITDNAYTSSQIREMETLILKELKFELGRPLPLHFLRRASKAGE 278
Query: 423 VELRTQHLCSFLCELSLLHTSLSAYAPARLAAAALLLARLTHGQTQPWTTQLWDLTGFSY 482
V++ L +L EL+L+ + Y P+++AAAA L++ GQ + W + TG++
Sbjct: 279 VDVEQHTLAKYLMELTLIDYDMVHYHPSKVAAAASCLSQKVLGQGK-WNLKQQYYTGYTE 337
Query: 483 EDLIPCVLSLHK 494
+++ + + K
Sbjct: 338 NEVLEVMQHMAK 349
>gi|16306525 cyclin B3 isoform 1 [Homo sapiens]
Length = 291
Score = 71.2 bits (173), Expect = 3e-12
Identities = 46/170 (27%), Positives = 84/170 (49%), Gaps = 1/170 (0%)
Query: 325 DFTSLCLHLTVECVDRYLRRRLVPRYRLQLLGIACMVICTRFISKEILTIREAVWLTDNT 384
+ T L+L V+ VD YL + + + +LQLLG +I +F + + V++ D+
Sbjct: 72 EMTHETLYLAVKLVDLYLMKAVCKKDKLQLLGATAFMIAAKFEEHNSPRVDDFVYICDDN 131
Query: 385 YKYEDLVRMMGEIVSALEGKIRVPTVVDYKEVLLTLVPVELRTQHLCSFLCELSLLHTSL 444
Y+ +++ M I++ L+ I +P + + ++T L ++CE++L
Sbjct: 132 YQRSEVLSMEINILNVLKCDINIPIAYHFLRRYARCIHTNMKTLTLSRYICEMTLQEYHY 191
Query: 445 SAYAPARLAAAALLLARLTHGQTQPWTTQLWDLTGFSYEDLIPCVLSLHK 494
++LAAA+LLLA L + W L +G+S +L P V L+K
Sbjct: 192 VQEKASKLAAASLLLA-LYMKKLGYWVPFLEHYSGYSISELHPLVRQLNK 240
>gi|242247025 cyclin N-terminal domain containing 2 isoform 2 [Homo
sapiens]
Length = 307
Score = 70.9 bits (172), Expect = 4e-12
Identities = 49/167 (29%), Positives = 82/167 (49%), Gaps = 1/167 (0%)
Query: 300 SVQKGLNDTMRYILIDWLVEVATMKDFTSLCLHLTVECVDRYLRRRLVPRYRLQLLGIAC 359
++ + + MR +++DWLV+V L+L V +D YL V +RLQLLG+AC
Sbjct: 98 ALPRAVTPEMRALVVDWLVQVHEYLGLAGDTLYLAVHLLDSYLSAGRVRLHRLQLLGVAC 157
Query: 360 MVICTRFISKEILTIREAVWLTDNTYKYEDLVRMMGEIVSALEGKIRVPTVVDYKEVLLT 419
+ + + + L+ +++ +L+R I+S L+ ++ P + +L
Sbjct: 158 LFVACKMEECVLPEPAFLCLLSADSFSRAELLRAERRILSRLDFRLHHPGPLLCLGLLAA 217
Query: 420 LVPVELRTQHLCSFLCELSLLHTSLSAYAPARLAAAALLLA-RLTHG 465
L + L ++ ELSLL + + P R AAAAL LA RL G
Sbjct: 218 LAGSSPQVMLLATYFLELSLLEAEAAGWEPGRRAAAALSLAHRLLDG 264
>gi|4502617 cyclin D2 [Homo sapiens]
Length = 289
Score = 61.6 bits (148), Expect = 3e-09
Identities = 54/235 (22%), Positives = 105/235 (44%), Gaps = 11/235 (4%)
Query: 301 VQKGLNDTMRYILIDWLVEVATMKDFTSLCLHLTVECVDRYLRRRLVPRYRLQLLGIACM 360
VQK + MR ++ W++EV + L + +DR+L P+ LQLLG CM
Sbjct: 47 VQKDIQPYMRRMVATWMLEVCEEQKCEEEVFPLAMNYLDRFLAGVPTPKSHLQLLGAVCM 106
Query: 361 VICTRFISKEILTIREAVWLTDNTYKYEDLVRMMGEIVSALEGKIRVPTVVDYKEVLLTL 420
+ ++ LT + TDN+ K ++L+ ++ L+ + T D+ E +L
Sbjct: 107 FLASKLKETSPLTAEKLCIYTDNSIKPQELLEWELVVLGKLKWNLAAVTPHDFIEHILRK 166
Query: 421 VP-----VELRTQHLCSFLCELSLLHTSLSAYAPARLAAAALLLARLTHGQTQPWTTQLW 475
+P + L +H +F+ L + Y P+ +A ++ A Q + ++
Sbjct: 167 LPQQREKLSLIRKHAQTFIA-LCATDFKFAMYPPSMIATGSVGAAICGLQQDE----EVS 221
Query: 476 DLTGFSYEDLIPCVLSLHKKCFHDDAPKDYRQVSLTAVKQRFEDKRYGEISQEEV 530
LT + +L+ + + C + V L +++Q +D+R G S++E+
Sbjct: 222 SLTCDALTELLAKITNTDVDCL-KACQEQIEAVLLNSLQQYRQDQRDGSKSEDEL 275
>gi|16950655 cyclin D1 [Homo sapiens]
Length = 295
Score = 59.7 bits (143), Expect = 1e-08
Identities = 44/165 (26%), Positives = 81/165 (49%), Gaps = 6/165 (3%)
Query: 301 VQKGLNDTMRYILIDWLVEVATMKDFTSLCLHLTVECVDRYLRRRLVPRYRLQLLGIACM 360
VQK + +MR I+ W++EV + L + +DR+L V + RLQLLG CM
Sbjct: 48 VQKEVLPSMRKIVATWMLEVCEEQKCEEEVFPLAMNYLDRFLSLEPVKKSRLQLLGATCM 107
Query: 361 VICTRFISKEILTIREAVWLTDNTYKYEDLVRMMGEIVSALEGKIRVPTVVDYKEVLLTL 420
+ ++ LT + TDN+ + E+L++M +V+ L+ + T D+ E L+
Sbjct: 108 FVASKMKETIPLTAEKLCIYTDNSIRPEELLQMELLLVNKLKWNLAAMTPHDFIEHFLSK 167
Query: 421 VP-----VELRTQHLCSFLCELSLLHTSLSAYAPARLAAAALLLA 460
+P ++ +H +F+ L + P+ +AA +++ A
Sbjct: 168 MPEAEENKQIIRKHAQTFVA-LCATDVKFISNPPSMVAAGSVVAA 211
>gi|17318565 cyclin E2 [Homo sapiens]
Length = 404
Score = 52.0 bits (123), Expect = 2e-06
Identities = 35/134 (26%), Positives = 67/134 (50%), Gaps = 1/134 (0%)
Query: 286 LFQASQAVSKQQVFSVQKGLNDTMRYILIDWLVEVATMKDFTSLCLHLTVECVDRY-LRR 344
L + S+ V + + L MR IL+DWL+EV + +L + DR+ L +
Sbjct: 118 LKKESRYVHDKHFEVLHSDLEPQMRSILLDWLLEVCEVYTLHRETFYLAQDFFDRFMLTQ 177
Query: 345 RLVPRYRLQLLGIACMVICTRFISKEILTIREAVWLTDNTYKYEDLVRMMGEIVSALEGK 404
+ + + LQL+GI + I ++ ++E ++TD ED++RM I+ AL+ +
Sbjct: 178 KDINKNMLQLIGITSLFIASKLEEIYAPKLQEFAYVTDGACSEEDILRMELIILKALKWE 237
Query: 405 IRVPTVVDYKEVLL 418
+ T++ + + L
Sbjct: 238 LCPVTIISWLNLFL 251
>gi|153791755 cyclin domain containing [Homo sapiens]
Length = 350
Score = 50.1 bits (118), Expect = 8e-06
Identities = 56/227 (24%), Positives = 94/227 (41%), Gaps = 16/227 (7%)
Query: 271 QLGLEVRASSEIVCQLFQASQA--VSKQQVFSVQKGLNDTMRYILIDWLVEVATM--KDF 326
QL L+ C F+ +Q ++ + Q + R L+ WL+ V F
Sbjct: 92 QLDLQTFRDYGQSCYAFRKAQESHFHPREALARQPQVTAESRCKLLSWLIPVHRQFGLSF 151
Query: 327 TSLCLHLTVECVDRYLRRRLVPRYRLQLLGIACMVICTRFISKEILTIREAVWLTDNTYK 386
SLCL TV +DR+L V QLLG+ ++I + + +++ + L +
Sbjct: 152 ESLCL--TVNTLDRFLTTTPVAADCFQLLGVTSLLIACKQVEVHPPRVKQLLALCCGAFS 209
Query: 387 YEDLVRMMGEIVSALEGKIRVPTVVDYKEVLLTLVPVE---------LRTQHLCSFLCEL 437
+ L + ++ L + PT+ + E T VE L Q L + EL
Sbjct: 210 RQQLCNLECIVLHKLHFTLGAPTISFFLE-HFTHARVEAGQAEASEALEAQALARGVAEL 268
Query: 438 SLLHTSLSAYAPARLAAAALLLARLTHGQTQPWTTQLWDLTGFSYED 484
SL + ++Y+P+ LA L LA ++P +L D + ED
Sbjct: 269 SLADYAFTSYSPSLLAICCLALADRMLRVSRPVDLRLGDHPEAALED 315
>gi|17318559 cyclin E1 isoform 1 [Homo sapiens]
Length = 410
Score = 48.5 bits (114), Expect = 2e-05
Identities = 44/167 (26%), Positives = 76/167 (45%), Gaps = 16/167 (9%)
Query: 305 LNDTMRYILIDWLVEVATMKDFTSLCLHLTVECVDRYL-RRRLVPRYRLQLLGIACMVIC 363
L MR IL+DWL+EV + +L + DRY+ + V + LQL+GI+ + I
Sbjct: 140 LQPKMRAILLDWLMEVCEVYKLHRETFYLAQDFFDRYMATQENVVKTLLQLIGISSLFIA 199
Query: 364 TRFISKEILTIREAVWLTDNTYKYEDLVRMMGEIVSALEGKIRVPTVV------------ 411
+ + + ++TD ++++ M I+ AL+ ++ T+V
Sbjct: 200 AKLEEIYPPKLHQFAYVTDGACSGDEILTMELMIMKALKWRLSPLTIVSWLNVYMQVAYL 259
Query: 412 -DYKEVLLTLVPVELRTQHLCSFLCELSLLHTSLSAYAPARLAAAAL 457
D EVLL P ++ Q + L +L +L + LAA+AL
Sbjct: 260 NDLHEVLLPQYPQQIFIQ--IAELLDLCVLDVDCLEFPYGILAASAL 304
>gi|17318561 cyclin E1 isoform 2 [Homo sapiens]
Length = 395
Score = 48.5 bits (114), Expect = 2e-05
Identities = 44/167 (26%), Positives = 76/167 (45%), Gaps = 16/167 (9%)
Query: 305 LNDTMRYILIDWLVEVATMKDFTSLCLHLTVECVDRYL-RRRLVPRYRLQLLGIACMVIC 363
L MR IL+DWL+EV + +L + DRY+ + V + LQL+GI+ + I
Sbjct: 125 LQPKMRAILLDWLMEVCEVYKLHRETFYLAQDFFDRYMATQENVVKTLLQLIGISSLFIA 184
Query: 364 TRFISKEILTIREAVWLTDNTYKYEDLVRMMGEIVSALEGKIRVPTVV------------ 411
+ + + ++TD ++++ M I+ AL+ ++ T+V
Sbjct: 185 AKLEEIYPPKLHQFAYVTDGACSGDEILTMELMIMKALKWRLSPLTIVSWLNVYMQVAYL 244
Query: 412 -DYKEVLLTLVPVELRTQHLCSFLCELSLLHTSLSAYAPARLAAAAL 457
D EVLL P ++ Q + L +L +L + LAA+AL
Sbjct: 245 NDLHEVLLPQYPQQIFIQ--IAELLDLCVLDVDCLEFPYGILAASAL 289
>gi|197276674 cyclin J isoform 1 [Homo sapiens]
Length = 383
Score = 48.5 bits (114), Expect = 2e-05
Identities = 41/196 (20%), Positives = 88/196 (44%), Gaps = 26/196 (13%)
Query: 320 VATMKDFTSLC---LHLTVECVDRYLRRRLVPRYRLQLLGIACMVICTRFISKE-----I 371
+A + + +LC HL V +D ++ R + +L L+ ++C+++ ++F KE +
Sbjct: 47 IAIVSNRFTLCPSARHLAVYLLDLFMDRYDISIQQLHLVALSCLLLASKFEEKEDSVPKL 106
Query: 372 LTIREAVWLTDNTYKY--EDLVRMMGEIVSALEGKIRVPTVVDYKEVLLT---------- 419
+ +T+ ++L+ M ++ + + +PT + E L+
Sbjct: 107 EQLNSLGCMTNMNLVLTKQNLLHMELLLLETFQWNLCLPTAAHFIEYYLSEAVHETDLHD 166
Query: 420 ------LVPVELRTQHLCSFLCELSLLHTSLSAYAPARLAAAALLLARLTHGQTQPWTTQ 473
L +L + E+SL + YAP+ +AAA + +R+ + W T+
Sbjct: 167 GWPMICLEKTKLYMAKYADYFLEVSLQDYAFLNYAPSLVAAACVASSRIILRLSPTWPTR 226
Query: 474 LWDLTGFSYEDLIPCV 489
L LT +S++ L+ C+
Sbjct: 227 LHRLTAYSWDFLVQCI 242
>gi|4502619 cyclin D3 isoform 2 [Homo sapiens]
Length = 292
Score = 42.4 bits (98), Expect = 0.002
Identities = 37/162 (22%), Positives = 69/162 (42%), Gaps = 6/162 (3%)
Query: 301 VQKGLNDTMRYILIDWLVEVATMKDFTSLCLHLTVECVDRYLRRRLVPRYRLQLLGIACM 360
VQ+ + MR +L W++EV + L + +DRYL + +LQLLG CM
Sbjct: 48 VQREIKPHMRKMLAYWMLEVCEEQRCEEEVFPLAMNYLDRYLSCVPTRKAQLQLLGAVCM 107
Query: 361 VICTRFISKEILTIREAVWLTDNTYKYEDLVRMMGEIVSALEGKIRVPTVVDYKEVLLTL 420
++ ++ LTI + TD+ L ++ L+ + D+ +L
Sbjct: 108 LLASKLRETTPLTIEKLCIYTDHAVSPRQLRDWEVLVLGKLKWDLAAVIAHDFLAFILHR 167
Query: 421 VPV-----ELRTQHLCSFLCELSLLHTSLSAYAPARLAAAAL 457
+ + L +H +FL L + + Y P+ +A ++
Sbjct: 168 LSLPRDRQALVKKHAQTFLA-LCATDYTFAMYPPSMIATGSI 208
>gi|40254889 cyclin J isoform 2 [Homo sapiens]
Length = 372
Score = 40.0 bits (92), Expect = 0.008
Identities = 38/186 (20%), Positives = 84/186 (45%), Gaps = 17/186 (9%)
Query: 320 VATMKDFTSLC---LHLTVECVDRYLRRRLVPRYRLQLLGIACMVICTRFISKE-----I 371
+A + + +LC HL V +D ++ R + +L L+ ++C+++ ++F KE +
Sbjct: 47 IAIVSNRFTLCPSARHLAVYLLDLFMDRYDISIQQLHLVALSCLLLASKFEEKEDSVPKL 106
Query: 372 LTIREAVWLTDN--TYKYEDLVRMMGEIVSALEGKIRVPTVVDYKEVLLTLVPVELRTQH 429
+ +T+ ++L+ M ++ + + +PT + E L+ E
Sbjct: 107 EQLNSLGCMTNMNLVLTKQNLLHMELLLLETFQWNLCLPTAAHFIEYYLSEAVHETDLHD 166
Query: 430 LCSFLCELSLLHTSLSAYA------PARLAAAALLLARLTHGQTQPWTTQLWDLTGFSYE 483
+C L ++ YA ++AAA + +R+ + W T+L LT +S++
Sbjct: 167 GWPMIC-LEKTKLYMAKYADYFLEVSLQVAAACVASSRIILRLSPTWPTRLHRLTAYSWD 225
Query: 484 DLIPCV 489
L+ C+
Sbjct: 226 FLVQCI 231
>gi|197276676 cyclin J isoform 3 [Homo sapiens]
Length = 371
Score = 39.7 bits (91), Expect = 0.011
Identities = 39/185 (21%), Positives = 83/185 (44%), Gaps = 16/185 (8%)
Query: 320 VATMKDFTSLC---LHLTVECVDRYLRRRLVPRYRLQLLGIACMVICTRFISKE-----I 371
+A + + +LC HL V +D ++ R + +L L+ ++C+++ ++F KE +
Sbjct: 47 IAIVSNRFTLCPSARHLAVYLLDLFMDRYDISIQQLHLVALSCLLLASKFEEKEDSVPKL 106
Query: 372 LTIREAVWLTDN--TYKYEDLVRMMGEIVSALEGKIRVPTVVDYKEVLLTLVPVELRTQH 429
+ +T+ ++L+ M ++ + + +PT + E L+ E
Sbjct: 107 EQLNSLGCMTNMNLVLTKQNLLHMELLLLETFQWNLCLPTAAHFIEYYLSEAVHETDLHD 166
Query: 430 LCSFLCELSLLHTSLSAYAPARL-----AAAALLLARLTHGQTQPWTTQLWDLTGFSYED 484
+C L ++ YA L AAA + +R+ + W T+L LT +S++
Sbjct: 167 GWPMIC-LEKTKLYMAKYADYFLEVSLQAAACVASSRIILRLSPTWPTRLHRLTAYSWDF 225
Query: 485 LIPCV 489
L+ C+
Sbjct: 226 LVQCI 230
>gi|6005926 U2 (RNU2) small nuclear RNA auxiliary factor 2 isoform a
[Homo sapiens]
Length = 475
Score = 39.3 bits (90), Expect = 0.014
Identities = 36/145 (24%), Positives = 67/145 (46%), Gaps = 8/145 (5%)
Query: 79 QELWPSPGNLKLFERAAEKGNFEAAVKLGIAYLYNEGLSVSDEARAEVNGLKASRFFSLA 138
+EL S G LK F + + G A+ ++V+D+A A +NG++ L
Sbjct: 276 KELLTSFGPLKAFNLVKDSAT---GLSKGYAFCEYVDINVTDQAIAGLNGMQLGDKKLLV 332
Query: 139 ERLNVGAAPFIWLFIRPPWSVSGSCCKAVVHESLRAECQLQRTHKASILHCLGRVL--SL 196
+R +VGA + PP +++ + V + ++ Q+ H +L + VL L
Sbjct: 333 QRASVGAKNA--TLVSPPSTINQTPVTLQVPGLMSSQVQM-GGHPTEVLCLMNMVLPEEL 389
Query: 197 FEDEEKQQQAHDLFEEAAHQGCLTS 221
+DEE ++ D+ +E + G + S
Sbjct: 390 LDDEEYEEIVEDVRDECSKYGLVKS 414
>gi|61966703 NHS-like 2 [Homo sapiens]
Length = 709
Score = 38.9 bits (89), Expect = 0.019
Identities = 36/116 (31%), Positives = 52/116 (44%), Gaps = 17/116 (14%)
Query: 651 QESSDEEACPEDKGPQDPQALALDTQIPATPGPKPLVRTSREPGKDVTTSGYSSVS-TAS 709
Q SS+ A P P L+++ + P R PG +SGYSS S T +
Sbjct: 304 QGSSESLASPSTSRATTPSQLSIEVEAREISSP------GRPPGLMSPSSGYSSQSETPT 357
Query: 710 PTSSVDGGLGALPQPTSVLSLDSDSHTQPCHHQARKSCLQCRPPSPPESSVPQQQV 765
PT S+ LG LP P+S + +P + RKS L PP+ P P+ ++
Sbjct: 358 PTVSMSLTLGHLPPPSSSV------RVRPVVPE-RKSSL---PPTSPMEKFPKSRL 403
>gi|222418647 mucin 7, secreted precursor [Homo sapiens]
Length = 377
Score = 37.4 bits (85), Expect = 0.054
Identities = 29/112 (25%), Positives = 42/112 (37%), Gaps = 6/112 (5%)
Query: 653 SSDEEACPEDKGPQDPQALALDTQIPATPGPKPLVRTSREPGKDVTTSGYSSVSTASP-T 711
S+ +A P P + A P P P +S P + S +T +P +
Sbjct: 196 SATTQAPPSSSAPPETTAAP-----PTPPATTPAPPSSSAPPETTAAPPTPSATTPAPLS 250
Query: 712 SSVDGGLGALPQPTSVLSLDSDSHTQPCHHQARKSCLQCRPPSPPESSVPQQ 763
SS A+P S +LD S + P A P+PP S PQ+
Sbjct: 251 SSAPPETTAVPPTPSATTLDPSSASAPPETTAAPPTPSATTPAPPSSPAPQE 302
>gi|222418649 mucin 7, secreted precursor [Homo sapiens]
Length = 377
Score = 37.4 bits (85), Expect = 0.054
Identities = 29/112 (25%), Positives = 42/112 (37%), Gaps = 6/112 (5%)
Query: 653 SSDEEACPEDKGPQDPQALALDTQIPATPGPKPLVRTSREPGKDVTTSGYSSVSTASP-T 711
S+ +A P P + A P P P +S P + S +T +P +
Sbjct: 196 SATTQAPPSSSAPPETTAAP-----PTPPATTPAPPSSSAPPETTAAPPTPSATTPAPLS 250
Query: 712 SSVDGGLGALPQPTSVLSLDSDSHTQPCHHQARKSCLQCRPPSPPESSVPQQ 763
SS A+P S +LD S + P A P+PP S PQ+
Sbjct: 251 SSAPPETTAVPPTPSATTLDPSSASAPPETTAAPPTPSATTPAPPSSPAPQE 302
>gi|222418645 mucin 7, secreted precursor [Homo sapiens]
Length = 377
Score = 37.4 bits (85), Expect = 0.054
Identities = 29/112 (25%), Positives = 42/112 (37%), Gaps = 6/112 (5%)
Query: 653 SSDEEACPEDKGPQDPQALALDTQIPATPGPKPLVRTSREPGKDVTTSGYSSVSTASP-T 711
S+ +A P P + A P P P +S P + S +T +P +
Sbjct: 196 SATTQAPPSSSAPPETTAAP-----PTPPATTPAPPSSSAPPETTAAPPTPSATTPAPLS 250
Query: 712 SSVDGGLGALPQPTSVLSLDSDSHTQPCHHQARKSCLQCRPPSPPESSVPQQ 763
SS A+P S +LD S + P A P+PP S PQ+
Sbjct: 251 SSAPPETTAVPPTPSATTLDPSSASAPPETTAAPPTPSATTPAPPSSPAPQE 302
>gi|187608312 cyclin N-terminal domain containing 1 [Homo sapiens]
Length = 330
Score = 37.0 bits (84), Expect = 0.071
Identities = 47/193 (24%), Positives = 85/193 (44%), Gaps = 29/193 (15%)
Query: 287 FQASQAVSKQQVFSVQKGLNDTMRYILIDWLVEVATMKDFTSLCLHLTVECVD------- 339
F+ Q V + S Q L ++ Y ++ ++E +K ++C T++ D
Sbjct: 50 FREPQIVEFVFLLSEQWCLEKSVSYQAVE-ILERFMVKQAENICRQATIQPRDNKRESQN 108
Query: 340 -RYLRRRLVPRYRLQLLGIACMVICTRFISKEILTIREAVWLTDNTYKY--EDLVRMMGE 396
R L+++LV ++ L+L+ + F +K I I +L Y + E+L+ +
Sbjct: 109 WRALKQQLVNKFTLRLVSCVQLASKLSFRNKIISNITVLNFLQALGYLHTKEELLESELD 168
Query: 397 IVSALEGKIRVPTVVDYKEVLL-------TLVPVELRTQHLCSFLCEL----------SL 439
++ +L +I +PT + Y E LL LVP +R C L +L SL
Sbjct: 169 VLKSLNFRINLPTPLAYVETLLEVLGYNGCLVPA-MRLHATCLTLLDLVYLLHEPIYESL 227
Query: 440 LHTSLSAYAPARL 452
L S+ P++L
Sbjct: 228 LRASIENSTPSQL 240
>gi|5031767 heat shock transcription factor 1 [Homo sapiens]
Length = 529
Score = 36.2 bits (82), Expect = 0.12
Identities = 39/128 (30%), Positives = 56/128 (43%), Gaps = 25/128 (19%)
Query: 662 DKGPQDPQALALDTQIPATPGPKPLVRTSREPGKDVTTSGYSSVSTA-SPTSSVDGGLG- 719
D+ P L + P +P P V + PG+ SSV T SPT+ +D L
Sbjct: 285 DERPLSSSPLVRVKEEPPSPPQSPRVEEA-SPGRP------SSVDTLLSPTALIDSILRE 337
Query: 720 ALPQPTSVLSL-DSDSHTQPCHHQARKSCLQCRPPSPPESSVPQQQVK-----RINLCIH 773
+ P P SV +L D+ HT + RPPSPP +S P++ + + L H
Sbjct: 338 SEPAPASVTALTDARGHTDT----------EGRPPSPPPTSTPEKCLSVACLDKNELSDH 387
Query: 774 SEEEDMNL 781
+ D NL
Sbjct: 388 LDAMDSNL 395
>gi|5031703 Ras-GTPase-activating protein SH3-domain-binding protein
[Homo sapiens]
Length = 466
Score = 35.8 bits (81), Expect = 0.16
Identities = 48/199 (24%), Positives = 75/199 (37%), Gaps = 52/199 (26%)
Query: 583 GSFVTTPTAELSSQEETLLGSFLDWSLDCCSGYEGDQESEGEKEGDVTAPSGILDVTVVY 642
G FVT P E S+EE E +E + E D VV
Sbjct: 139 GGFVTEPQEE--SEEEV----------------EEPEERQQTPEVVPDDSGTFYDQAVVS 180
Query: 643 LNPEQHCCQESSDEEACPEDKGPQDP--------------QALALDTQIPATPGPKPLVR 688
+ E+H + ++ E PE + Q+P + D Q ++P P + +
Sbjct: 181 NDMEEHLEEPVAEPEPDPEPEPEQEPVSEIQEEKPEPVLEETAPEDAQKSSSPAPADIAQ 240
Query: 689 TSREPGKDVTTSGYSSVSTASPTSSVDGGLGALPQPTSVLSLDSDSHTQPCHHQARKSCL 748
T +E D+ T ++SV++ + S GA+P T H +
Sbjct: 241 TVQE---DLRTFSWASVTSKNLPPS-----GAVPV------------TGIPPHVVKVPAS 280
Query: 749 QCRPPSPPESSVPQQQVKR 767
Q RP S PES +P Q+ +R
Sbjct: 281 QPRPESKPESQIPPQRPQR 299
>gi|38327552 Ras-GTPase-activating protein SH3-domain-binding
protein [Homo sapiens]
Length = 466
Score = 35.8 bits (81), Expect = 0.16
Identities = 48/199 (24%), Positives = 75/199 (37%), Gaps = 52/199 (26%)
Query: 583 GSFVTTPTAELSSQEETLLGSFLDWSLDCCSGYEGDQESEGEKEGDVTAPSGILDVTVVY 642
G FVT P E S+EE E +E + E D VV
Sbjct: 139 GGFVTEPQEE--SEEEV----------------EEPEERQQTPEVVPDDSGTFYDQAVVS 180
Query: 643 LNPEQHCCQESSDEEACPEDKGPQDP--------------QALALDTQIPATPGPKPLVR 688
+ E+H + ++ E PE + Q+P + D Q ++P P + +
Sbjct: 181 NDMEEHLEEPVAEPEPDPEPEPEQEPVSEIQEEKPEPVLEETAPEDAQKSSSPAPADIAQ 240
Query: 689 TSREPGKDVTTSGYSSVSTASPTSSVDGGLGALPQPTSVLSLDSDSHTQPCHHQARKSCL 748
T +E D+ T ++SV++ + S GA+P T H +
Sbjct: 241 TVQE---DLRTFSWASVTSKNLPPS-----GAVPV------------TGIPPHVVKVPAS 280
Query: 749 QCRPPSPPESSVPQQQVKR 767
Q RP S PES +P Q+ +R
Sbjct: 281 QPRPESKPESQIPPQRPQR 299
Database: hs.faa
Posted date: Aug 4, 2009 4:42 PM
Number of letters in database: 18,247,518
Number of sequences in database: 37,866
Lambda K H
0.319 0.133 0.406
Gapped
Lambda K H
0.267 0.0410 0.140
Matrix: BLOSUM62
Gap Penalties: Existence: 11, Extension: 1
Number of Hits to DB: 32,236,477
Number of Sequences: 37866
Number of extensions: 1526431
Number of successful extensions: 5672
Number of sequences better than 10.0: 30
Number of HSP's better than 10.0 without gapping: 25
Number of HSP's successfully gapped in prelim test: 89
Number of HSP's that attempted gapping in prelim test: 5532
Number of HSP's gapped (non-prelim): 310
length of query: 786
length of database: 18,247,518
effective HSP length: 110
effective length of query: 676
effective length of database: 14,082,258
effective search space: 9519606408
effective search space used: 9519606408
T: 11
A: 40
X1: 16 ( 7.4 bits)
X2: 38 (14.6 bits)
X3: 64 (24.7 bits)
S1: 41 (21.8 bits)
S2: 66 (30.0 bits)
Search results were obtained with NCBI BLAST and RefSeq entries.
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Guide to the Human Genome
Copyright © 2010 by Stewart Scherer. All rights reserved.