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Search of human proteins with 239751665
BLASTP 2.2.11 [Jun-05-2005]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= gi|239751665 PREDICTED: hypothetical protein XP_002347963 [Homo
sapiens]
(379 letters)
Database: hs.faa
37,866 sequences; 18,247,518 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
gi|239751665 PREDICTED: hypothetical protein XP_002347963 [Homo ... 785 0.0
gi|239746171 PREDICTED: hypothetical protein XP_002343683 [Homo ... 785 0.0
gi|239757142 PREDICTED: hypothetical protein [Homo sapiens] 397 e-111
gi|119508426 alpha 3 type IX collagen [Homo sapiens] 34 0.25
gi|116268127 kinase non-catalytic C-lobe domain (KIND) containin... 32 0.72
gi|13899253 uridine-cytidine kinase 1 isoform a [Homo sapiens] 32 1.2
gi|7662236 TSC22 domain family, member 2 [Homo sapiens] 31 1.6
gi|146219843 Snf2-related CBP activator protein [Homo sapiens] 31 1.6
gi|115392133 collagen, type XXIV, alpha 1 [Homo sapiens] 31 1.6
gi|169206171 PREDICTED: hypothetical protein [Homo sapiens] 30 2.7
gi|239753928 PREDICTED: hypothetical protein [Homo sapiens] 30 2.7
gi|169206489 PREDICTED: hypothetical protein [Homo sapiens] 30 2.7
gi|239748470 PREDICTED: hypothetical protein [Homo sapiens] 30 2.7
gi|169205942 PREDICTED: hypothetical protein [Homo sapiens] 30 2.7
gi|239742434 PREDICTED: hypothetical protein XP_002342514 [Homo ... 30 2.7
gi|188536004 zinc finger protein 469 [Homo sapiens] 30 2.7
gi|18104993 protein tyrosine phosphatase, non-receptor type 6 is... 30 2.7
gi|18104989 protein tyrosine phosphatase, non-receptor type 6 is... 30 2.7
gi|18104991 protein tyrosine phosphatase, non-receptor type 6 is... 30 2.7
gi|157427675 ADAM metallopeptidase with thrombospondin type 1 mo... 30 2.7
gi|153792764 hypothetical protein LOC57624 [Homo sapiens] 30 3.6
gi|188595687 gamma filamin isoform b [Homo sapiens] 30 3.6
gi|116805322 gamma filamin isoform a [Homo sapiens] 30 3.6
gi|239755634 PREDICTED: hypothetical protein [Homo sapiens] 30 3.6
gi|239753409 PREDICTED: similar to hCG1811893 [Homo sapiens] 30 3.6
gi|239750121 PREDICTED: hypothetical protein XP_002347280 [Homo ... 30 3.6
gi|239744429 PREDICTED: hypothetical protein XP_002343157 [Homo ... 30 3.6
gi|126352608 elastin isoform e precursor [Homo sapiens] 30 4.7
gi|126352322 elastin isoform c precursor [Homo sapiens] 30 4.7
gi|126352700 elastin isoform b precursor [Homo sapiens] 30 4.7
>gi|239751665 PREDICTED: hypothetical protein XP_002347963 [Homo
sapiens]
Length = 379
Score = 785 bits (2026), Expect = 0.0
Identities = 379/379 (100%), Positives = 379/379 (100%)
Query: 1 MSPTQVQGPFGDTHHLEWSSVLLKLGPAGPGKAIWFTFRTCQISEQLEGRMPTVLCQNWT 60
MSPTQVQGPFGDTHHLEWSSVLLKLGPAGPGKAIWFTFRTCQISEQLEGRMPTVLCQNWT
Sbjct: 1 MSPTQVQGPFGDTHHLEWSSVLLKLGPAGPGKAIWFTFRTCQISEQLEGRMPTVLCQNWT 60
Query: 61 CRLVPRAAANQPEYRLTISKFAELGKALENSPGLGCECDAAVPGFLANVVALDHILQVGE 120
CRLVPRAAANQPEYRLTISKFAELGKALENSPGLGCECDAAVPGFLANVVALDHILQVGE
Sbjct: 61 CRLVPRAAANQPEYRLTISKFAELGKALENSPGLGCECDAAVPGFLANVVALDHILQVGE 120
Query: 121 FLGKDPFQLVVIDPGVGVGQLLAWRTRGGGNARSFQVLVSKPRTHPVSLTRLTHLRELSE 180
FLGKDPFQLVVIDPGVGVGQLLAWRTRGGGNARSFQVLVSKPRTHPVSLTRLTHLRELSE
Sbjct: 121 FLGKDPFQLVVIDPGVGVGQLLAWRTRGGGNARSFQVLVSKPRTHPVSLTRLTHLRELSE 180
Query: 181 GKRHTEQGLPLARGPLHLAGVAPVQRLQASAHGPLRAVDECPAVPPASGALVQILVLQPS 240
GKRHTEQGLPLARGPLHLAGVAPVQRLQASAHGPLRAVDECPAVPPASGALVQILVLQPS
Sbjct: 181 GKRHTEQGLPLARGPLHLAGVAPVQRLQASAHGPLRAVDECPAVPPASGALVQILVLQPS 240
Query: 241 LRRLPGPSKSWQLVDHEPGVYRLPGVPVAGQGPGGDAQQRCQQQRDHSCYGAEIQESVSG 300
LRRLPGPSKSWQLVDHEPGVYRLPGVPVAGQGPGGDAQQRCQQQRDHSCYGAEIQESVSG
Sbjct: 241 LRRLPGPSKSWQLVDHEPGVYRLPGVPVAGQGPGGDAQQRCQQQRDHSCYGAEIQESVSG 300
Query: 301 LRGAGLHQRPGLAPGAFHFPKLAWEPGRGHHEGTDSSPETRCCVLERQKATLSLPRPRPR 360
LRGAGLHQRPGLAPGAFHFPKLAWEPGRGHHEGTDSSPETRCCVLERQKATLSLPRPRPR
Sbjct: 301 LRGAGLHQRPGLAPGAFHFPKLAWEPGRGHHEGTDSSPETRCCVLERQKATLSLPRPRPR 360
Query: 361 RARRSSVSWSLATVPFRGS 379
RARRSSVSWSLATVPFRGS
Sbjct: 361 RARRSSVSWSLATVPFRGS 379
>gi|239746171 PREDICTED: hypothetical protein XP_002343683 [Homo
sapiens]
Length = 379
Score = 785 bits (2026), Expect = 0.0
Identities = 379/379 (100%), Positives = 379/379 (100%)
Query: 1 MSPTQVQGPFGDTHHLEWSSVLLKLGPAGPGKAIWFTFRTCQISEQLEGRMPTVLCQNWT 60
MSPTQVQGPFGDTHHLEWSSVLLKLGPAGPGKAIWFTFRTCQISEQLEGRMPTVLCQNWT
Sbjct: 1 MSPTQVQGPFGDTHHLEWSSVLLKLGPAGPGKAIWFTFRTCQISEQLEGRMPTVLCQNWT 60
Query: 61 CRLVPRAAANQPEYRLTISKFAELGKALENSPGLGCECDAAVPGFLANVVALDHILQVGE 120
CRLVPRAAANQPEYRLTISKFAELGKALENSPGLGCECDAAVPGFLANVVALDHILQVGE
Sbjct: 61 CRLVPRAAANQPEYRLTISKFAELGKALENSPGLGCECDAAVPGFLANVVALDHILQVGE 120
Query: 121 FLGKDPFQLVVIDPGVGVGQLLAWRTRGGGNARSFQVLVSKPRTHPVSLTRLTHLRELSE 180
FLGKDPFQLVVIDPGVGVGQLLAWRTRGGGNARSFQVLVSKPRTHPVSLTRLTHLRELSE
Sbjct: 121 FLGKDPFQLVVIDPGVGVGQLLAWRTRGGGNARSFQVLVSKPRTHPVSLTRLTHLRELSE 180
Query: 181 GKRHTEQGLPLARGPLHLAGVAPVQRLQASAHGPLRAVDECPAVPPASGALVQILVLQPS 240
GKRHTEQGLPLARGPLHLAGVAPVQRLQASAHGPLRAVDECPAVPPASGALVQILVLQPS
Sbjct: 181 GKRHTEQGLPLARGPLHLAGVAPVQRLQASAHGPLRAVDECPAVPPASGALVQILVLQPS 240
Query: 241 LRRLPGPSKSWQLVDHEPGVYRLPGVPVAGQGPGGDAQQRCQQQRDHSCYGAEIQESVSG 300
LRRLPGPSKSWQLVDHEPGVYRLPGVPVAGQGPGGDAQQRCQQQRDHSCYGAEIQESVSG
Sbjct: 241 LRRLPGPSKSWQLVDHEPGVYRLPGVPVAGQGPGGDAQQRCQQQRDHSCYGAEIQESVSG 300
Query: 301 LRGAGLHQRPGLAPGAFHFPKLAWEPGRGHHEGTDSSPETRCCVLERQKATLSLPRPRPR 360
LRGAGLHQRPGLAPGAFHFPKLAWEPGRGHHEGTDSSPETRCCVLERQKATLSLPRPRPR
Sbjct: 301 LRGAGLHQRPGLAPGAFHFPKLAWEPGRGHHEGTDSSPETRCCVLERQKATLSLPRPRPR 360
Query: 361 RARRSSVSWSLATVPFRGS 379
RARRSSVSWSLATVPFRGS
Sbjct: 361 RARRSSVSWSLATVPFRGS 379
>gi|239757142 PREDICTED: hypothetical protein [Homo sapiens]
Length = 275
Score = 397 bits (1021), Expect = e-111
Identities = 207/244 (84%), Positives = 213/244 (87%), Gaps = 9/244 (3%)
Query: 1 MSPTQVQGPFGDTHHLEWSSVLLKLGPAGPGKAIWFTFRTCQISEQLEGRMPTVLCQNWT 60
MSPTQVQGPFGDTHHLEWSSVLLKLGPAGPGKAIWFTFRTCQISEQLEGRMPTVLCQNWT
Sbjct: 1 MSPTQVQGPFGDTHHLEWSSVLLKLGPAGPGKAIWFTFRTCQISEQLEGRMPTVLCQNWT 60
Query: 61 CRLVPRAAANQPEYRLTISKFAELGKALENSPGLGCECDAAVPGFLANVVALDHILQVGE 120
CRLVPRAAANQPEYRLTISKFAELGKALENSPGLGCECDAAVPGFLANVVALDHILQVGE
Sbjct: 61 CRLVPRAAANQPEYRLTISKFAELGKALENSPGLGCECDAAVPGFLANVVALDHILQVGE 120
Query: 121 FLGKDPFQLVVIDPGVGVGQLLAWRTRGGGNARSFQVLVSKPRTHPVSLTRLTHLRELSE 180
FLGKDPFQLVVIDPGVGVGQLLAWRTRGGGNARSFQVLVSKPRTHPVSLTRLTHLRELSE
Sbjct: 121 FLGKDPFQLVVIDPGVGVGQLLAWRTRGGGNARSFQVLVSKPRTHPVSLTRLTHLRELSE 180
Query: 181 GKRHTEQGLPLA---RGPLH--LAGVAPVQRLQ-ASAHGPLRAVDE--CPAVPPA-SGAL 231
GKRHTEQGLP+ R P H + +A ++RL G LRA C P A SG L
Sbjct: 181 GKRHTEQGLPVGLTLRVPTHGRVLSLAGLRRLVIVEQEGELRADKRSGCRLRPTAPSGLL 240
Query: 232 VQIL 235
+ L
Sbjct: 241 MSAL 244
>gi|119508426 alpha 3 type IX collagen [Homo sapiens]
Length = 684
Score = 33.9 bits (76), Expect = 0.25
Identities = 26/83 (31%), Positives = 36/83 (43%), Gaps = 4/83 (4%)
Query: 259 GVYRLPGVPVAGQGPGGDAQQRCQQQRDHSCYGAEIQESVSGLRGAGLHQRPGLAPGAFH 318
G+ +PGVP PG ++ +Q+ C G I E ++ L H R LAPG+
Sbjct: 499 GLQGVPGVPGITGKPGVPGKEASEQRIRELC-GGMISEQIAQLAA---HLRKPLAPGSIG 554
Query: 319 FPKLAWEPGRGHHEGTDSSPETR 341
P A PG G+ P R
Sbjct: 555 RPGPAGPPGPPGPPGSIGHPGAR 577
>gi|116268127 kinase non-catalytic C-lobe domain (KIND) containing 1
isoform a [Homo sapiens]
Length = 1749
Score = 32.3 bits (72), Expect = 0.72
Identities = 37/125 (29%), Positives = 55/125 (44%), Gaps = 13/125 (10%)
Query: 160 SKPRTHPVSLTRLTHLRELSEGKRHTEQGLPLARGPLHLAGVAPVQRLQAS----AHGPL 215
S PR H ++L R L +R + P A + + G +QR S AH L
Sbjct: 542 SVPRNHKLALPRRLKTLLLDMARRSAPER-PSAAEAIKVCGSYLLQRGMDSRKILAH--L 598
Query: 216 RAVDECPAVPPASGALVQ----ILVLQPSLRRLPGPSKSWQLVDHEPGVYRLPGVPVAGQ 271
RA C +Q ++ L+PS+ P PS + V+ + G+ +PG PV GQ
Sbjct: 599 RA-SICQVYQEEETISLQNAFSVVELKPSVAPAPEPSPGFLPVNSDTGLVAVPG-PVPGQ 656
Query: 272 GPGGD 276
P G+
Sbjct: 657 HPCGE 661
>gi|13899253 uridine-cytidine kinase 1 isoform a [Homo sapiens]
Length = 277
Score = 31.6 bits (70), Expect = 1.2
Identities = 25/84 (29%), Positives = 39/84 (46%), Gaps = 19/84 (22%)
Query: 99 DAAVPGFLANVVALDHILQ-VGEFLGKDPFQLVVIDPGVGVGQLLAWRTRGGGNARSFQV 157
D +P + N+VA++ I+Q + + L G + W RGG N RS++
Sbjct: 207 DVIIPRGVDNMVAINLIVQHIQDILN---------------GDICKWH-RGGSNGRSYKR 250
Query: 158 LVSKPRTHPVSLT--RLTHLRELS 179
S+P HP LT + +HL S
Sbjct: 251 TFSEPGDHPGMLTSGKRSHLESSS 274
>gi|7662236 TSC22 domain family, member 2 [Homo sapiens]
Length = 780
Score = 31.2 bits (69), Expect = 1.6
Identities = 28/117 (23%), Positives = 48/117 (41%), Gaps = 10/117 (8%)
Query: 188 GLPLARGPLHLAGVAPVQRLQASAHGPLRAVDECPAVPPASGALVQILVLQPSLRRLPGP 247
G P + P + G P+ + H + V PA PA ++ + ++ +P P
Sbjct: 476 GQPQSVPPPQMGGSGPLSAVPGGPHAVVPGVPNVPAAVPAP-SVPSVSTTSVTMPNVPAP 534
Query: 248 -SKSWQLVDHEP-----GVYRLPGVPVAGQGPGGDAQQRCQQQRDHSCYGAEIQESV 298
++S QL H P + + G+P+A PG + Q D S + + Q V
Sbjct: 535 LAQSQQLSSHTPVSRSSSIIQHVGLPLA---PGTHSAPTSLPQSDLSQFQTQTQPLV 588
>gi|146219843 Snf2-related CBP activator protein [Homo sapiens]
Length = 3230
Score = 31.2 bits (69), Expect = 1.6
Identities = 32/124 (25%), Positives = 48/124 (38%), Gaps = 23/124 (18%)
Query: 260 VYRLPGV----PVAGQ----GPGGDAQQRCQQQRDHSCYGAEIQESVSGLRGAGLHQRPG 311
V+RLP P AG G GG +R ++ + G + E + G R
Sbjct: 2353 VFRLPQEEEEGPGAGDESSCGTGGGTHRRSKKAKAPERPGTRVSERLRGARAE------- 2405
Query: 312 LAPGAFHFPKLAWEPGRGHHEGTDSSPETRCCVLERQKATLSLPRPRPRRARRSSVSWSL 371
GA H P ++ H + ++P C R++ PRPRP A + +L
Sbjct: 2406 -TQGANHTPVIS-----AHQTRSTTTPPR--CSPARERVPRPAPRPRPTPASAPAAIPAL 2457
Query: 372 ATVP 375
VP
Sbjct: 2458 VPVP 2461
>gi|115392133 collagen, type XXIV, alpha 1 [Homo sapiens]
Length = 1714
Score = 31.2 bits (69), Expect = 1.6
Identities = 31/101 (30%), Positives = 39/101 (38%), Gaps = 5/101 (4%)
Query: 238 QPSLRRLPGPSKSWQLVDHEPGVYRLPGVPVAGQGPGGDAQQRCQQQRDHSCYGAEIQES 297
QP LPGP + V PG P GP GD +R + + G +
Sbjct: 1177 QPGPSGLPGPKGEKGYPGEDSTVLGPPG-PRGEPGPVGDQGERGEPGAE----GYKGHVG 1231
Query: 298 VSGLRGAGLHQRPGLAPGAFHFPKLAWEPGRGHHEGTDSSP 338
V GLRGA Q P PG L E G ++G +P
Sbjct: 1232 VPGLRGATGQQGPPGEPGDQGEQGLKGERGSEGNKGKKGAP 1272
>gi|169206171 PREDICTED: hypothetical protein [Homo sapiens]
Length = 466
Score = 30.4 bits (67), Expect = 2.7
Identities = 34/114 (29%), Positives = 42/114 (36%), Gaps = 14/114 (12%)
Query: 145 RTRGGGNARSFQVLVSKPRTHPVSLTRLTHLRELSEGKRHTE-----QGLPLARGPLHLA 199
R RGGG LV R V+ + TH G R +G+P R A
Sbjct: 304 RLRGGGGGSGLTQLVGSGRGSGVTHSVGTHALATRRGSRAPRPVGVLRGVPHFRPLSSPA 363
Query: 200 GVAPVQRLQASAHGPLRAVD--ECPAVPPASGALVQILVLQPSLRRLPGPSKSW 251
+P + A GP CP P A+ AL I VL PS P+ W
Sbjct: 364 PQSPPRSPSVRAFGPRLGAGRLSCPQAPRAA-ALPGIAVLAPS------PAHDW 410
>gi|239753928 PREDICTED: hypothetical protein [Homo sapiens]
Length = 1179
Score = 30.4 bits (67), Expect = 2.7
Identities = 31/112 (27%), Positives = 40/112 (35%), Gaps = 28/112 (25%)
Query: 162 PRTHPVSLTRLTHLRELSEGKRHTEQGLPLARGPLHLAGVAPVQRLQASAHGP------- 214
P P L L + G Q LP++RG AG A V+ A G
Sbjct: 590 PGAAPGQAVELIGLLRAAGGALQEGQQLPVSRGTQGEAGAAGVRGPVGGAGGADGPGVQE 649
Query: 215 -----------------LRAVDECPAVPPASGALVQILVLQ----PSLRRLP 245
A +CP +P GAL+ +L+LQ P L RLP
Sbjct: 650 REQALCTLLGQQLHIILTAAPAKCPQLPSCPGALLLLLLLQPLQLPQLLRLP 701
>gi|169206489 PREDICTED: hypothetical protein [Homo sapiens]
Length = 564
Score = 30.4 bits (67), Expect = 2.7
Identities = 34/114 (29%), Positives = 42/114 (36%), Gaps = 14/114 (12%)
Query: 145 RTRGGGNARSFQVLVSKPRTHPVSLTRLTHLRELSEGKRHTE-----QGLPLARGPLHLA 199
R RGGG LV R V+ + TH G R +G+P R A
Sbjct: 402 RLRGGGGGSGLTQLVGSGRGSGVTHSVGTHALATRRGSRAPRPVGVLRGVPHFRPLSSPA 461
Query: 200 GVAPVQRLQASAHGPLRAVD--ECPAVPPASGALVQILVLQPSLRRLPGPSKSW 251
+P + A GP CP P A+ AL I VL PS P+ W
Sbjct: 462 PQSPPRSPSVRAFGPRLGAGRLSCPQAPRAA-ALPGIAVLAPS------PAHDW 508
>gi|239748470 PREDICTED: hypothetical protein [Homo sapiens]
Length = 889
Score = 30.4 bits (67), Expect = 2.7
Identities = 31/112 (27%), Positives = 40/112 (35%), Gaps = 28/112 (25%)
Query: 162 PRTHPVSLTRLTHLRELSEGKRHTEQGLPLARGPLHLAGVAPVQRLQASAHGP------- 214
P P L L + G Q LP++RG AG A V+ A G
Sbjct: 590 PGAAPGQAVELIGLLRAAGGALQEGQQLPVSRGTQGEAGAAGVRGPVGGAGGADGPGVQE 649
Query: 215 -----------------LRAVDECPAVPPASGALVQILVLQ----PSLRRLP 245
A +CP +P GAL+ +L+LQ P L RLP
Sbjct: 650 REQALCTLLGQQLHIILTAAPAKCPQLPSCPGALLLLLLLQPLQLPQLLRLP 701
>gi|169205942 PREDICTED: hypothetical protein [Homo sapiens]
Length = 564
Score = 30.4 bits (67), Expect = 2.7
Identities = 34/114 (29%), Positives = 42/114 (36%), Gaps = 14/114 (12%)
Query: 145 RTRGGGNARSFQVLVSKPRTHPVSLTRLTHLRELSEGKRHTE-----QGLPLARGPLHLA 199
R RGGG LV R V+ + TH G R +G+P R A
Sbjct: 402 RLRGGGGGSGLTQLVGSGRGSGVTHSVGTHALATRRGSRAPRPVGVLRGVPHFRPLSSPA 461
Query: 200 GVAPVQRLQASAHGPLRAVD--ECPAVPPASGALVQILVLQPSLRRLPGPSKSW 251
+P + A GP CP P A+ AL I VL PS P+ W
Sbjct: 462 PQSPPRSPSVRAFGPRLGAGRLSCPQAPRAA-ALPGIAVLAPS------PAHDW 508
>gi|239742434 PREDICTED: hypothetical protein XP_002342514 [Homo
sapiens]
Length = 889
Score = 30.4 bits (67), Expect = 2.7
Identities = 31/112 (27%), Positives = 40/112 (35%), Gaps = 28/112 (25%)
Query: 162 PRTHPVSLTRLTHLRELSEGKRHTEQGLPLARGPLHLAGVAPVQRLQASAHGP------- 214
P P L L + G Q LP++RG AG A V+ A G
Sbjct: 590 PGAAPGQAVELIGLLRAAGGALQEGQQLPVSRGTQGEAGAAGVRGPVGGAGGADGPGVQE 649
Query: 215 -----------------LRAVDECPAVPPASGALVQILVLQ----PSLRRLP 245
A +CP +P GAL+ +L+LQ P L RLP
Sbjct: 650 REQALCTLLGQQLHIILTAAPAKCPQLPSCPGALLLLLLLQPLQLPQLLRLP 701
>gi|188536004 zinc finger protein 469 [Homo sapiens]
Length = 3925
Score = 30.4 bits (67), Expect = 2.7
Identities = 40/151 (26%), Positives = 54/151 (35%), Gaps = 30/151 (19%)
Query: 139 GQLLAWRTRGGGNARSFQVLVSKPRTHPVSLTR--------LTHLRELSEGKRHTEQGLP 190
G +L + +G A S Q ++P P S R H R SEG+ P
Sbjct: 2004 GAVLLEKCKGSRAAMSLQE-EAEPTPSPPSPNRESLALALTAAHSRSGSEGRTPERASSP 2062
Query: 191 LARGPLHLAGVAPVQRL----------QASAH-----GPLRAVDECPAVPPASGALVQIL 235
PL G +P + ++AH GPL D + A G L L
Sbjct: 2063 GLNKPLLATGDSPAPSVGDLAACAPSPTSAAHMPCSLGPLPREDPLTSPSRAQGGLGGQL 2122
Query: 236 VLQPSLRRLPGP------SKSWQLVDHEPGV 260
PS R PGP S +W ++ GV
Sbjct: 2123 PASPSCRDPPGPQQLLACSPAWAPLEEADGV 2153
>gi|18104993 protein tyrosine phosphatase, non-receptor type 6
isoform 3 [Homo sapiens]
Length = 624
Score = 30.4 bits (67), Expect = 2.7
Identities = 14/33 (42%), Positives = 21/33 (63%)
Query: 157 VLVSKPRTHPVSLTRLTHLRELSEGKRHTEQGL 189
VL +P+ P S R+TH++ + EG R+T GL
Sbjct: 149 VLSDQPKAGPGSPLRVTHIKVMCEGGRYTVGGL 181
>gi|18104989 protein tyrosine phosphatase, non-receptor type 6
isoform 1 [Homo sapiens]
Length = 595
Score = 30.4 bits (67), Expect = 2.7
Identities = 14/33 (42%), Positives = 21/33 (63%)
Query: 157 VLVSKPRTHPVSLTRLTHLRELSEGKRHTEQGL 189
VL +P+ P S R+TH++ + EG R+T GL
Sbjct: 149 VLSDQPKAGPGSPLRVTHIKVMCEGGRYTVGGL 181
>gi|18104991 protein tyrosine phosphatase, non-receptor type 6
isoform 2 [Homo sapiens]
Length = 597
Score = 30.4 bits (67), Expect = 2.7
Identities = 14/33 (42%), Positives = 21/33 (63%)
Query: 157 VLVSKPRTHPVSLTRLTHLRELSEGKRHTEQGL 189
VL +P+ P S R+TH++ + EG R+T GL
Sbjct: 151 VLSDQPKAGPGSPLRVTHIKVMCEGGRYTVGGL 183
>gi|157427675 ADAM metallopeptidase with thrombospondin type 1
motif, 4 preproprotein [Homo sapiens]
Length = 837
Score = 30.4 bits (67), Expect = 2.7
Identities = 26/63 (41%), Positives = 30/63 (47%), Gaps = 6/63 (9%)
Query: 302 RGAGLHQRPGLAPGAFHFPKLAWEPGRGHHEGTDSSPETRCCVLERQKATLSLPRPRPRR 361
RGA LH +P L G P A PG H SP + + KA L P PRPRR
Sbjct: 156 RGAELHLQP-LEGGT---PNSAGGPGA--HILRRKSPASGQGPMCNVKAPLGSPSPRPRR 209
Query: 362 ARR 364
A+R
Sbjct: 210 AKR 212
>gi|153792764 hypothetical protein LOC57624 [Homo sapiens]
Length = 653
Score = 30.0 bits (66), Expect = 3.6
Identities = 20/66 (30%), Positives = 32/66 (48%), Gaps = 2/66 (3%)
Query: 166 PVSLTRLTHLRELSEGKRHTEQGLPLARGPLHLAGVAPVQRLQASAHGPLRAVDECPAVP 225
P+ +T+L L +S K+ G + P H+ G A +++ QA+A GP A + P
Sbjct: 357 PLEVTKLPVLENVSYMKQPA--GASPSTLPSHVPGHAKLEKEQAAALGPASATPALSSSP 414
Query: 226 PASGAL 231
P L
Sbjct: 415 PPPSTL 420
>gi|188595687 gamma filamin isoform b [Homo sapiens]
Length = 2692
Score = 30.0 bits (66), Expect = 3.6
Identities = 46/203 (22%), Positives = 72/203 (35%), Gaps = 40/203 (19%)
Query: 74 YRLTISKFAELGKALENSPGLGCECDAAVPGFLANVVALDHILQVGEFLGKDPFQLVVID 133
+R+ + + GK + PGLG A VP +D G+ P Q+ V+
Sbjct: 1433 FRVPVKDVVDPGKVKCSGPGLGAGVRARVP----QTFTVD-----CSQAGRAPLQVAVLG 1483
Query: 134 PGVGVGQLLAWRTRGGGNARSFQVLVSKPRTHPVSLTRLTHLRELSEGKRHTEQGLPLAR 193
P GV + + R G G TH V T T + ++ +Q +P R
Sbjct: 1484 P-TGVAEPVEVRDNGDG-------------THTVHYTPATD-GPYTVAVKYADQEVP--R 1526
Query: 194 GPLHLAGVAPVQRLQASAHGPLRAVDECPAVPP---------ASGALVQILVLQPSLRRL 244
P + + + A GP PA P A L+ + +L P
Sbjct: 1527 SPFKIKVLPAHDASKVRASGPGLNASGIPASLPVEFTIDARDAGEGLLTVQILDPE---- 1582
Query: 245 PGPSKSWQLVDHEPGVYRLPGVP 267
G K + D+ G Y + +P
Sbjct: 1583 -GKPKKANIRDNGDGTYTVSYLP 1604
>gi|116805322 gamma filamin isoform a [Homo sapiens]
Length = 2725
Score = 30.0 bits (66), Expect = 3.6
Identities = 46/203 (22%), Positives = 72/203 (35%), Gaps = 40/203 (19%)
Query: 74 YRLTISKFAELGKALENSPGLGCECDAAVPGFLANVVALDHILQVGEFLGKDPFQLVVID 133
+R+ + + GK + PGLG A VP +D G+ P Q+ V+
Sbjct: 1433 FRVPVKDVVDPGKVKCSGPGLGAGVRARVP----QTFTVD-----CSQAGRAPLQVAVLG 1483
Query: 134 PGVGVGQLLAWRTRGGGNARSFQVLVSKPRTHPVSLTRLTHLRELSEGKRHTEQGLPLAR 193
P GV + + R G G TH V T T + ++ +Q +P R
Sbjct: 1484 P-TGVAEPVEVRDNGDG-------------THTVHYTPATD-GPYTVAVKYADQEVP--R 1526
Query: 194 GPLHLAGVAPVQRLQASAHGPLRAVDECPAVPP---------ASGALVQILVLQPSLRRL 244
P + + + A GP PA P A L+ + +L P
Sbjct: 1527 SPFKIKVLPAHDASKVRASGPGLNASGIPASLPVEFTIDARDAGEGLLTVQILDPE---- 1582
Query: 245 PGPSKSWQLVDHEPGVYRLPGVP 267
G K + D+ G Y + +P
Sbjct: 1583 -GKPKKANIRDNGDGTYTVSYLP 1604
>gi|239755634 PREDICTED: hypothetical protein [Homo sapiens]
Length = 449
Score = 30.0 bits (66), Expect = 3.6
Identities = 31/99 (31%), Positives = 41/99 (41%), Gaps = 10/99 (10%)
Query: 135 GVGVGQLLAWRTRGG---GNARSFQVLVSKPRTHPVSLTRLTHLRELSEGKRHTEQGLPL 191
GVG G+ AW RGG G +R + L+ +T L RE+ + + P
Sbjct: 343 GVGSGRARAWEPRGGRESGRSRRRKSLLEDLQTE----ATLWPSREVP--REPSRPSCPQ 396
Query: 192 ARGPLH-LAGVAPVQRLQASAHGPLRAVDECPAVPPASG 229
H A A ++RL A A P RA PPA G
Sbjct: 397 GVAETHTTAERAQLRRLAARAPRPPRATSLRAETPPAQG 435
>gi|239753409 PREDICTED: similar to hCG1811893 [Homo sapiens]
Length = 669
Score = 30.0 bits (66), Expect = 3.6
Identities = 20/66 (30%), Positives = 32/66 (48%), Gaps = 2/66 (3%)
Query: 166 PVSLTRLTHLRELSEGKRHTEQGLPLARGPLHLAGVAPVQRLQASAHGPLRAVDECPAVP 225
P+ +T+L L +S K+ G + P H+ G A +++ QA+A GP A + P
Sbjct: 357 PLEVTKLPVLENVSYMKQPA--GASPSTLPSHVPGHAKLEKEQAAALGPASATPALSSSP 414
Query: 226 PASGAL 231
P L
Sbjct: 415 PPPSTL 420
>gi|239750121 PREDICTED: hypothetical protein XP_002347280 [Homo
sapiens]
Length = 402
Score = 30.0 bits (66), Expect = 3.6
Identities = 31/99 (31%), Positives = 41/99 (41%), Gaps = 10/99 (10%)
Query: 135 GVGVGQLLAWRTRGG---GNARSFQVLVSKPRTHPVSLTRLTHLRELSEGKRHTEQGLPL 191
GVG G+ AW RGG G +R + L+ +T L RE+ + + P
Sbjct: 296 GVGSGRARAWEPRGGRESGRSRRRKSLLEDLQTE----ATLWPSREVP--REPSRPSCPQ 349
Query: 192 ARGPLH-LAGVAPVQRLQASAHGPLRAVDECPAVPPASG 229
H A A ++RL A A P RA PPA G
Sbjct: 350 GVAETHTTAERAQLRRLAARAPRPPRATSLRAETPPAQG 388
>gi|239744429 PREDICTED: hypothetical protein XP_002343157 [Homo
sapiens]
Length = 449
Score = 30.0 bits (66), Expect = 3.6
Identities = 31/99 (31%), Positives = 41/99 (41%), Gaps = 10/99 (10%)
Query: 135 GVGVGQLLAWRTRGG---GNARSFQVLVSKPRTHPVSLTRLTHLRELSEGKRHTEQGLPL 191
GVG G+ AW RGG G +R + L+ +T L RE+ + + P
Sbjct: 343 GVGSGRARAWEPRGGRESGRSRRRKSLLEDLQTE----ATLWPSREVP--REPSRPSCPQ 396
Query: 192 ARGPLH-LAGVAPVQRLQASAHGPLRAVDECPAVPPASG 229
H A A ++RL A A P RA PPA G
Sbjct: 397 GVAETHTTAERAQLRRLAARAPRPPRATSLRAETPPAQG 435
>gi|126352608 elastin isoform e precursor [Homo sapiens]
Length = 705
Score = 29.6 bits (65), Expect = 4.7
Identities = 23/75 (30%), Positives = 29/75 (38%), Gaps = 3/75 (4%)
Query: 258 PGVYRLPGV---PVAGQGPGGDAQQRCQQQRDHSCYGAEIQESVSGLRGAGLHQRPGLAP 314
PGV +PGV P G P A + + G + V G G+ GLAP
Sbjct: 421 PGVGGVPGVGGVPGVGISPEAQAAAAAKAAKYGLVPGVGVAPGVGVAPGVGVAPGVGLAP 480
Query: 315 GAFHFPKLAWEPGRG 329
G P + PG G
Sbjct: 481 GVGVAPGVGVAPGVG 495
>gi|126352322 elastin isoform c precursor [Homo sapiens]
Length = 692
Score = 29.6 bits (65), Expect = 4.7
Identities = 23/75 (30%), Positives = 29/75 (38%), Gaps = 3/75 (4%)
Query: 258 PGVYRLPGV---PVAGQGPGGDAQQRCQQQRDHSCYGAEIQESVSGLRGAGLHQRPGLAP 314
PGV +PGV P G P A + + G + V G G+ GLAP
Sbjct: 426 PGVGGVPGVGGVPGVGISPEAQAAAAAKAAKYGLVPGVGVAPGVGVAPGVGVAPGVGLAP 485
Query: 315 GAFHFPKLAWEPGRG 329
G P + PG G
Sbjct: 486 GVGVAPGVGVAPGVG 500
>gi|126352700 elastin isoform b precursor [Homo sapiens]
Length = 677
Score = 29.6 bits (65), Expect = 4.7
Identities = 23/75 (30%), Positives = 29/75 (38%), Gaps = 3/75 (4%)
Query: 258 PGVYRLPGV---PVAGQGPGGDAQQRCQQQRDHSCYGAEIQESVSGLRGAGLHQRPGLAP 314
PGV +PGV P G P A + + G + V G G+ GLAP
Sbjct: 411 PGVGGVPGVGGVPGVGISPEAQAAAAAKAAKYGLVPGVGVAPGVGVAPGVGVAPGVGLAP 470
Query: 315 GAFHFPKLAWEPGRG 329
G P + PG G
Sbjct: 471 GVGVAPGVGVAPGVG 485
Database: hs.faa
Posted date: Aug 4, 2009 4:42 PM
Number of letters in database: 18,247,518
Number of sequences in database: 37,866
Lambda K H
0.319 0.137 0.436
Gapped
Lambda K H
0.267 0.0410 0.140
Matrix: BLOSUM62
Gap Penalties: Existence: 11, Extension: 1
Number of Hits to DB: 18,747,488
Number of Sequences: 37866
Number of extensions: 1017691
Number of successful extensions: 2500
Number of sequences better than 10.0: 30
Number of HSP's better than 10.0 without gapping: 12
Number of HSP's successfully gapped in prelim test: 33
Number of HSP's that attempted gapping in prelim test: 2442
Number of HSP's gapped (non-prelim): 87
length of query: 379
length of database: 18,247,518
effective HSP length: 104
effective length of query: 275
effective length of database: 14,309,454
effective search space: 3935099850
effective search space used: 3935099850
T: 11
A: 40
X1: 16 ( 7.4 bits)
X2: 38 (14.6 bits)
X3: 64 (24.7 bits)
S1: 41 (21.8 bits)
S2: 63 (28.9 bits)
Search results were obtained with NCBI BLAST and RefSeq entries.
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Guide to the Human Genome
Copyright © 2010 by Stewart Scherer. All rights reserved.