Search of human proteins with 239751426

Search of human proteins with 239751426

BLASTP 2.2.11 [Jun-05-2005]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= gi|239751426 PREDICTED: similar to hCG2038304 [Homo sapiens]
         (165 letters)

Database: hs.faa 
           37,866 sequences; 18,247,518 total letters

Searching..................................................done

                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

gi|239751426 PREDICTED: similar to hCG2038304 [Homo sapiens]          345   1e-95
gi|239745930 PREDICTED: hypothetical protein XP_002343579 [Homo ...   345   1e-95
gi|239754020 PREDICTED: hypothetical protein [Homo sapiens]           126   1e-29
gi|239748551 PREDICTED: hypothetical protein XP_002346721 [Homo ...   126   1e-29
gi|239742535 PREDICTED: hypothetical protein XP_002342535 [Homo ...   126   1e-29
gi|119220552 sidekick 1 [Homo sapiens]                                 34   0.050
gi|34335186 cAMP responsive element modulator isoform a [Homo sa...    31   0.56 
gi|34335222 cAMP responsive element modulator isoform u [Homo sa...    31   0.56 
gi|34335214 cAMP responsive element modulator isoform o [Homo sa...    31   0.56 
gi|34335210 cAMP responsive element modulator isoform m [Homo sa...    31   0.56 
gi|4885375 histone cluster 1, H1c [Homo sapiens]                       30   0.73 
gi|27886590 PTK2B protein tyrosine kinase 2 beta isoform a [Homo...    30   0.95 
gi|27886586 PTK2B protein tyrosine kinase 2 beta isoform a [Homo...    30   0.95 
gi|27886584 PTK2B protein tyrosine kinase 2 beta isoform a [Homo...    30   0.95 
gi|22538461 nuclear receptor co-repressor 1 [Homo sapiens]             30   1.2  
gi|206597543 hypothetical protein LOC118461 isoform 1 [Homo sapi...    30   1.2  
gi|46367787 poly(A) binding protein, cytoplasmic 1 [Homo sapiens]      29   1.6  
gi|38488767 microtubule associated serine/threonine kinase famil...    29   1.6  
gi|150418009 transforming, acidic coiled-coil containing protein...    29   1.6  
gi|40788001 sprouty homolog 1, antagonist of FGF signaling [Homo...    29   1.6  
gi|40538726 sprouty homolog 1, antagonist of FGF signaling [Homo...    29   1.6  
gi|39930517 sterile alpha motif domain containing 1 [Homo sapiens]     29   1.6  
gi|239752594 PREDICTED: hypothetical protein, partial [Homo sapi...    29   2.1  
gi|169213800 PREDICTED: hypothetical protein [Homo sapiens]            28   2.8  
gi|169214229 PREDICTED: hypothetical protein [Homo sapiens]            28   2.8  
gi|169213573 PREDICTED: hypothetical protein [Homo sapiens]            28   2.8  
gi|221139764 PHD and ring finger domains 1 [Homo sapiens]              28   2.8  
gi|239756270 PREDICTED: StAR-related lipid transfer (START) doma...    28   3.6  
gi|239750815 PREDICTED: StAR-related lipid transfer (START) doma...    28   3.6  
gi|239745175 PREDICTED: StAR-related lipid transfer (START) doma...    28   3.6  

>gi|239751426 PREDICTED: similar to hCG2038304 [Homo sapiens]
          Length = 165

 Score =  345 bits (885), Expect = 1e-95
 Identities = 165/165 (100%), Positives = 165/165 (100%)

Query: 1   MSRQKSVAGAKPSWRTSSKAVQRGNVGLEPPYRVPTGALPSGAVKRGPPSSRPRNASSTD 60
           MSRQKSVAGAKPSWRTSSKAVQRGNVGLEPPYRVPTGALPSGAVKRGPPSSRPRNASSTD
Sbjct: 1   MSRQKSVAGAKPSWRTSSKAVQRGNVGLEPPYRVPTGALPSGAVKRGPPSSRPRNASSTD 60

Query: 61  NFHLASEKAAATQCQSMKAAAEAVPCRATVAELPKAVRAHPLHQHAIYMRHGFKGDYFGA 120
           NFHLASEKAAATQCQSMKAAAEAVPCRATVAELPKAVRAHPLHQHAIYMRHGFKGDYFGA
Sbjct: 61  NFHLASEKAAATQCQSMKAAAEAVPCRATVAELPKAVRAHPLHQHAIYMRHGFKGDYFGA 120

Query: 121 LRFNDCPVGFWTCVGPLALFFLPISPFWNGSIYPMLVLPLYLGSN 165
           LRFNDCPVGFWTCVGPLALFFLPISPFWNGSIYPMLVLPLYLGSN
Sbjct: 121 LRFNDCPVGFWTCVGPLALFFLPISPFWNGSIYPMLVLPLYLGSN 165


>gi|239745930 PREDICTED: hypothetical protein XP_002343579 [Homo
           sapiens]
          Length = 165

 Score =  345 bits (885), Expect = 1e-95
 Identities = 165/165 (100%), Positives = 165/165 (100%)

Query: 1   MSRQKSVAGAKPSWRTSSKAVQRGNVGLEPPYRVPTGALPSGAVKRGPPSSRPRNASSTD 60
           MSRQKSVAGAKPSWRTSSKAVQRGNVGLEPPYRVPTGALPSGAVKRGPPSSRPRNASSTD
Sbjct: 1   MSRQKSVAGAKPSWRTSSKAVQRGNVGLEPPYRVPTGALPSGAVKRGPPSSRPRNASSTD 60

Query: 61  NFHLASEKAAATQCQSMKAAAEAVPCRATVAELPKAVRAHPLHQHAIYMRHGFKGDYFGA 120
           NFHLASEKAAATQCQSMKAAAEAVPCRATVAELPKAVRAHPLHQHAIYMRHGFKGDYFGA
Sbjct: 61  NFHLASEKAAATQCQSMKAAAEAVPCRATVAELPKAVRAHPLHQHAIYMRHGFKGDYFGA 120

Query: 121 LRFNDCPVGFWTCVGPLALFFLPISPFWNGSIYPMLVLPLYLGSN 165
           LRFNDCPVGFWTCVGPLALFFLPISPFWNGSIYPMLVLPLYLGSN
Sbjct: 121 LRFNDCPVGFWTCVGPLALFFLPISPFWNGSIYPMLVLPLYLGSN 165


>gi|239754020 PREDICTED: hypothetical protein [Homo sapiens]
          Length = 178

 Score =  126 bits (316), Expect = 1e-29
 Identities = 66/101 (65%), Positives = 74/101 (73%), Gaps = 1/101 (0%)

Query: 1   MSRQKSVAGAKPSWRTSSKAVQRGNVGLEPPYRVPTGALPSGAVKRGPPSSRPRNASSTD 60
           MSRQKS A  +P+WRTS+ A  RGNVGLE P+RVPTGALPSGAVKRGP SSRP    STD
Sbjct: 56  MSRQKSAAWEEPTWRTSTMARHRGNVGLESPHRVPTGALPSGAVKRGPLSSRPLKCRSTD 115

Query: 61  NFHLASEKAAATQCQSMKAAAEAVPCRATVAELPKAVRAHP 101
           + H A    A TQ Q MKAAA A PCRAT  ELP +++ HP
Sbjct: 116 SLHCAPGN-AGTQGQPMKAAAGAAPCRATGVELPNSLKDHP 155


>gi|239748551 PREDICTED: hypothetical protein XP_002346721 [Homo
           sapiens]
          Length = 178

 Score =  126 bits (316), Expect = 1e-29
 Identities = 66/101 (65%), Positives = 74/101 (73%), Gaps = 1/101 (0%)

Query: 1   MSRQKSVAGAKPSWRTSSKAVQRGNVGLEPPYRVPTGALPSGAVKRGPPSSRPRNASSTD 60
           MSRQKS A  +P+WRTS+ A  RGNVGLE P+RVPTGALPSGAVKRGP SSRP    STD
Sbjct: 56  MSRQKSAAWEEPTWRTSTMARHRGNVGLESPHRVPTGALPSGAVKRGPLSSRPLKCRSTD 115

Query: 61  NFHLASEKAAATQCQSMKAAAEAVPCRATVAELPKAVRAHP 101
           + H A    A TQ Q MKAAA A PCRAT  ELP +++ HP
Sbjct: 116 SLHCAPGN-AGTQGQPMKAAAGAAPCRATGVELPNSLKDHP 155


>gi|239742535 PREDICTED: hypothetical protein XP_002342535 [Homo
           sapiens]
          Length = 178

 Score =  126 bits (316), Expect = 1e-29
 Identities = 66/101 (65%), Positives = 74/101 (73%), Gaps = 1/101 (0%)

Query: 1   MSRQKSVAGAKPSWRTSSKAVQRGNVGLEPPYRVPTGALPSGAVKRGPPSSRPRNASSTD 60
           MSRQKS A  +P+WRTS+ A  RGNVGLE P+RVPTGALPSGAVKRGP SSRP    STD
Sbjct: 56  MSRQKSAAWEEPTWRTSTMARHRGNVGLESPHRVPTGALPSGAVKRGPLSSRPLKCRSTD 115

Query: 61  NFHLASEKAAATQCQSMKAAAEAVPCRATVAELPKAVRAHP 101
           + H A    A TQ Q MKAAA A PCRAT  ELP +++ HP
Sbjct: 116 SLHCAPGN-AGTQGQPMKAAAGAAPCRATGVELPNSLKDHP 155


>gi|119220552 sidekick 1 [Homo sapiens]
          Length = 2213

 Score = 34.3 bits (77), Expect = 0.050
 Identities = 29/81 (35%), Positives = 34/81 (41%), Gaps = 19/81 (23%)

Query: 9  GAKPSWRTSSKAVQRGNVGLEPPYRVPTG---------ALPSGAVKRGPPSSRPRNASST 59
          GA+PS      A   G  G EPP R   G         A PS A + GP  SRPR A  T
Sbjct: 4  GARPS------AAGGGGGGAEPPERAGPGRPRGSPPGRARPSLAPRPGPEPSRPRAAPET 57

Query: 60 DNFHLASEKAAATQCQSMKAA 80
                 + A A +C   +AA
Sbjct: 58 S----GGDTAGAGRCGGRRAA 74


>gi|34335186 cAMP responsive element modulator isoform a [Homo
           sapiens]
          Length = 300

 Score = 30.8 bits (68), Expect = 0.56
 Identities = 26/90 (28%), Positives = 35/90 (38%), Gaps = 10/90 (11%)

Query: 5   KSVAGAKPSWRTSSKAVQRGNVGLEPPY--RVPTGALPSGAVKRGPPSS------RPRNA 56
           +S  G +  +   S+ V +   G  P Y  R PT ALP G V    P S          A
Sbjct: 181 QSADGTQQFFVPGSQVVVQAATGDMPTYQIRAPTAALPQGVVMAASPGSLHSPQQLAEEA 240

Query: 57  SSTDNFHLASEKAAATQCQSMKAAAEAVPC 86
           +      L   + AA +C+  K   E V C
Sbjct: 241 TRKRELRLMKNREAAKECRRRK--KEYVKC 268


>gi|34335222 cAMP responsive element modulator isoform u [Homo
           sapiens]
          Length = 299

 Score = 30.8 bits (68), Expect = 0.56
 Identities = 26/90 (28%), Positives = 35/90 (38%), Gaps = 10/90 (11%)

Query: 5   KSVAGAKPSWRTSSKAVQRGNVGLEPPY--RVPTGALPSGAVKRGPPSS------RPRNA 56
           +S  G +  +   S+ V +   G  P Y  R PT ALP G V    P S          A
Sbjct: 181 QSADGTQQFFVPGSQVVVQAATGDMPTYQIRAPTAALPQGVVMAASPGSLHSPQQLAEEA 240

Query: 57  SSTDNFHLASEKAAATQCQSMKAAAEAVPC 86
           +      L   + AA +C+  K   E V C
Sbjct: 241 TRKRELRLMKNREAARECRRKK--KEYVKC 268


>gi|34335214 cAMP responsive element modulator isoform o [Homo
           sapiens]
          Length = 270

 Score = 30.8 bits (68), Expect = 0.56
 Identities = 26/90 (28%), Positives = 35/90 (38%), Gaps = 10/90 (11%)

Query: 5   KSVAGAKPSWRTSSKAVQRGNVGLEPPY--RVPTGALPSGAVKRGPPSS------RPRNA 56
           +S  G +  +   S+ V +   G  P Y  R PT ALP G V    P S          A
Sbjct: 151 QSADGTQQFFVPGSQVVVQAATGDMPTYQIRAPTAALPQGVVMAASPGSLHSPQQLAEEA 210

Query: 57  SSTDNFHLASEKAAATQCQSMKAAAEAVPC 86
           +      L   + AA +C+  K   E V C
Sbjct: 211 TRKRELRLMKNREAAKECRRRK--KEYVKC 238


>gi|34335210 cAMP responsive element modulator isoform m [Homo
           sapiens]
          Length = 245

 Score = 30.8 bits (68), Expect = 0.56
 Identities = 26/90 (28%), Positives = 35/90 (38%), Gaps = 10/90 (11%)

Query: 5   KSVAGAKPSWRTSSKAVQRGNVGLEPPY--RVPTGALPSGAVKRGPPSS------RPRNA 56
           +S  G +  +   S+ V +   G  P Y  R PT ALP G V    P S          A
Sbjct: 126 QSADGTQQFFVPGSQVVVQAATGDMPTYQIRAPTAALPQGVVMAASPGSLHSPQQLAEEA 185

Query: 57  SSTDNFHLASEKAAATQCQSMKAAAEAVPC 86
           +      L   + AA +C+  K   E V C
Sbjct: 186 TRKRELRLMKNREAAKECRRRK--KEYVKC 213


>gi|4885375 histone cluster 1, H1c [Homo sapiens]
          Length = 213

 Score = 30.4 bits (67), Expect = 0.73
 Identities = 26/104 (25%), Positives = 51/104 (49%), Gaps = 3/104 (2%)

Query: 1   MSRQKSVAGAKPSWRTSSKAVQRGNVG-LEPPYRVPTGALPSGAVKRGP-PSSRPRNASS 58
           ++++ +   AKP  + +     +  VG  + P +   GA P  + K+ P  + +P  A+ 
Sbjct: 107 LNKKAASGEAKPKVKKAGGTKPKKPVGAAKKPKKAAGGATPKKSAKKTPKKAKKPAAATV 166

Query: 59  TDNFHLASEKA-AATQCQSMKAAAEAVPCRATVAELPKAVRAHP 101
           T     + +KA  A   ++ K+AA+AV  +A   ++ K  +A P
Sbjct: 167 TKKVAKSPKKAKVAKPKKAAKSAAKAVKPKAAKPKVVKPKKAAP 210


>gi|27886590 PTK2B protein tyrosine kinase 2 beta isoform a [Homo
           sapiens]
          Length = 1009

 Score = 30.0 bits (66), Expect = 0.95
 Identities = 23/90 (25%), Positives = 36/90 (40%), Gaps = 7/90 (7%)

Query: 32  YRVPTGALPSGAVKRGPPSSRPRNASSTDNFHLASEKAAATQCQSMKAAAEAVPCRATVA 91
           YR P    P+   +  P  SRP+         LA +     Q Q  +    + P   +  
Sbjct: 699 YRTPKILEPTAFQEPPPKPSRPKYRPPPQTNLLAPK----LQFQVPEGLCASSPTLTSPM 754

Query: 92  ELPKAVRA---HPLHQHAIYMRHGFKGDYF 118
           E P  V +    PLH+H ++ RH  + + F
Sbjct: 755 EYPSPVNSLHTPPLHRHNVFKRHSMREEDF 784


>gi|27886586 PTK2B protein tyrosine kinase 2 beta isoform a [Homo
           sapiens]
          Length = 1009

 Score = 30.0 bits (66), Expect = 0.95
 Identities = 23/90 (25%), Positives = 36/90 (40%), Gaps = 7/90 (7%)

Query: 32  YRVPTGALPSGAVKRGPPSSRPRNASSTDNFHLASEKAAATQCQSMKAAAEAVPCRATVA 91
           YR P    P+   +  P  SRP+         LA +     Q Q  +    + P   +  
Sbjct: 699 YRTPKILEPTAFQEPPPKPSRPKYRPPPQTNLLAPK----LQFQVPEGLCASSPTLTSPM 754

Query: 92  ELPKAVRA---HPLHQHAIYMRHGFKGDYF 118
           E P  V +    PLH+H ++ RH  + + F
Sbjct: 755 EYPSPVNSLHTPPLHRHNVFKRHSMREEDF 784


>gi|27886584 PTK2B protein tyrosine kinase 2 beta isoform a [Homo
           sapiens]
          Length = 1009

 Score = 30.0 bits (66), Expect = 0.95
 Identities = 23/90 (25%), Positives = 36/90 (40%), Gaps = 7/90 (7%)

Query: 32  YRVPTGALPSGAVKRGPPSSRPRNASSTDNFHLASEKAAATQCQSMKAAAEAVPCRATVA 91
           YR P    P+   +  P  SRP+         LA +     Q Q  +    + P   +  
Sbjct: 699 YRTPKILEPTAFQEPPPKPSRPKYRPPPQTNLLAPK----LQFQVPEGLCASSPTLTSPM 754

Query: 92  ELPKAVRA---HPLHQHAIYMRHGFKGDYF 118
           E P  V +    PLH+H ++ RH  + + F
Sbjct: 755 EYPSPVNSLHTPPLHRHNVFKRHSMREEDF 784


>gi|22538461 nuclear receptor co-repressor 1 [Homo sapiens]
          Length = 2440

 Score = 29.6 bits (65), Expect = 1.2
 Identities = 29/100 (29%), Positives = 41/100 (41%), Gaps = 15/100 (15%)

Query: 7   VAGAKPSWRTSSKAVQRGN----VGLEPPYRVPTGALPSGAVKRGPPSSRPRNASSTD-- 60
           V   KPS  +   A  RGN    V LEP         PS AV    PS++P    S +  
Sbjct: 728 VEAVKPSEDSPENATSRGNTEPAVELEPTTETAPSTSPSLAV----PSTKPAEDESVETQ 783

Query: 61  -NFHLASEKAAATQCQSMKAAAEAVPCRATVAELPKAVRA 99
            N  +++E A        + +AE      +V + P A +A
Sbjct: 784 VNDSISAETAEQMDVDQQEHSAE----EGSVCDPPPATKA 819


>gi|206597543 hypothetical protein LOC118461 isoform 1 [Homo sapiens]
          Length = 1435

 Score = 29.6 bits (65), Expect = 1.2
 Identities = 12/28 (42%), Positives = 17/28 (60%)

Query: 28   LEPPYRVPTGALPSGAVKRGPPSSRPRN 55
            L  P+ +PT ALP G ++  PP  +P N
Sbjct: 995  LAAPWHIPTIALPEGDIEDQPPPWQPEN 1022


>gi|46367787 poly(A) binding protein, cytoplasmic 1 [Homo sapiens]
          Length = 636

 Score = 29.3 bits (64), Expect = 1.6
 Identities = 31/105 (29%), Positives = 47/105 (44%), Gaps = 15/105 (14%)

Query: 7   VAGAKPSWRTSSKAVQRGNVGLEP-PYRVPTGALPSGAVKRGPPSSRPRNASSTDNFHLA 65
           +A  +PS R +++       G  P P++   GA+   A +  PP S  R ASS     ++
Sbjct: 428 IAQLRPSPRWTAQ-------GARPHPFQNMPGAIRPAAPR--PPFSTMRPASSQVPRVMS 478

Query: 66  SEKAAATQCQSM-----KAAAEAVPCRATVAELPKAVRAHPLHQH 105
           +++ A T  Q+M      AAA A P   TV +   A       QH
Sbjct: 479 TQRVANTSTQTMGPRPAAAAAAATPAVRTVPQYKYAAGVRNPQQH 523


>gi|38488767 microtubule associated serine/threonine kinase family
           member 4 isoform b [Homo sapiens]
          Length = 250

 Score = 29.3 bits (64), Expect = 1.6
 Identities = 19/53 (35%), Positives = 27/53 (50%), Gaps = 10/53 (18%)

Query: 8   AGAKPSWRTSSKAVQRGNVGLEPPYRVPTGALPSGAVKRGPPSSRPRNASSTD 60
           A A  +W  +S  ++RG + L PP       LP GAV   PP+ R  +AS  +
Sbjct: 75  ARAPAAWAPASVLLERGVLALPPP-------LPGGAV---PPAPRGSSASQEE 117


>gi|150418009 transforming, acidic coiled-coil containing protein 2
            isoform a [Homo sapiens]
          Length = 2948

 Score = 29.3 bits (64), Expect = 1.6
 Identities = 27/100 (27%), Positives = 43/100 (43%), Gaps = 11/100 (11%)

Query: 9    GAKPSWRTSSKAVQRGNVGLEPPYRVPTGALPSG-----AVKRGPPSSRP-RNASSTDNF 62
            G  P W  S + +  GN G  PP +  + AL        A+    P   P ++A  T+  
Sbjct: 1023 GCSPLWGLSKREMASGNTGEAPPCQPDSVALLDAVPCLPALAPASPGVTPTQDAPETE-- 1080

Query: 63   HLASEKAAATQCQSMKAAAEAVPCRATV-AELPKAVRAHP 101
              A ++    + Q + A  + + C AT  AE PK + + P
Sbjct: 1081 --ACDETQEGRQQPVPAPQQKMECWATSDAESPKLLASFP 1118


>gi|40788001 sprouty homolog 1, antagonist of FGF signaling [Homo
           sapiens]
          Length = 319

 Score = 29.3 bits (64), Expect = 1.6
 Identities = 21/85 (24%), Positives = 30/85 (35%)

Query: 1   MSRQKSVAGAKPSWRTSSKAVQRGNVGLEPPYRVPTGALPSGAVKRGPPSSRPRNASSTD 60
           +SR  S   A  S   SS + ++G +G  PP R   G     A++  P      +   + 
Sbjct: 111 LSRSTSTGSAASSGSNSSASSEQGLLGRSPPTRPVPGHRSERAIRTQPKQLIVDDLKGSL 170

Query: 61  NFHLASEKAAATQCQSMKAAAEAVP 85
              L   K    QC   K      P
Sbjct: 171 KEDLTQHKFICEQCGKCKCGECTAP 195


>gi|40538726 sprouty homolog 1, antagonist of FGF signaling [Homo
           sapiens]
          Length = 319

 Score = 29.3 bits (64), Expect = 1.6
 Identities = 21/85 (24%), Positives = 30/85 (35%)

Query: 1   MSRQKSVAGAKPSWRTSSKAVQRGNVGLEPPYRVPTGALPSGAVKRGPPSSRPRNASSTD 60
           +SR  S   A  S   SS + ++G +G  PP R   G     A++  P      +   + 
Sbjct: 111 LSRSTSTGSAASSGSNSSASSEQGLLGRSPPTRPVPGHRSERAIRTQPKQLIVDDLKGSL 170

Query: 61  NFHLASEKAAATQCQSMKAAAEAVP 85
              L   K    QC   K      P
Sbjct: 171 KEDLTQHKFICEQCGKCKCGECTAP 195


>gi|39930517 sterile alpha motif domain containing 1 [Homo sapiens]
          Length = 538

 Score = 29.3 bits (64), Expect = 1.6
 Identities = 28/92 (30%), Positives = 39/92 (42%), Gaps = 8/92 (8%)

Query: 13  SWRTSSKAVQRGNVGLEPPY--RVPTGALPSGAVKRGPPSSRPRNASSTDNFHLASEKAA 70
           S+R +++ VQ    G  PP   R P GA  + A    PP+  P    +       +  A 
Sbjct: 92  SYRNAAR-VQPPRRGATPPAPPRAPRGAPAAAAAAAPPPTPAPPPPPAP-----VAAAAP 145

Query: 71  ATQCQSMKAAAEAVPCRATVAELPKAVRAHPL 102
           A   ++  AAA A P        P+A RA PL
Sbjct: 146 ARAPRAAAAAATAPPSPGPAQPGPRAQRAAPL 177


>gi|239752594 PREDICTED: hypothetical protein, partial [Homo
           sapiens]
          Length = 673

 Score = 28.9 bits (63), Expect = 2.1
 Identities = 20/68 (29%), Positives = 26/68 (38%), Gaps = 4/68 (5%)

Query: 31  PYRVPTGALPSGAVKRGPPSSRPRNASSTDNFHLA----SEKAAATQCQSMKAAAEAVPC 86
           P R P  A P+G   R  P+  P  AS T     A    S   A+       A+    P 
Sbjct: 430 PTRTPPRASPTGTPPRASPTGTPSRASPTGTQSTASPTGSPSTASPTGSPSTASPTGSPS 489

Query: 87  RATVAELP 94
           RA++   P
Sbjct: 490 RASLTRTP 497



 Score = 27.3 bits (59), Expect = 6.2
 Identities = 20/72 (27%), Positives = 30/72 (41%), Gaps = 3/72 (4%)

Query: 30  PPYRVPTGALPSGAVKRGPPSSRPRNASSTDNFHLASEKAAATQCQSMKAAAEAVPCRAT 89
           PP   PTG   + ++ R PP + P    S  +       A+ T+    +A+    P RA+
Sbjct: 389 PPRASPTGTPSTASLTRKPPRASPTGMLSRTSITKMDSTASPTRTPP-RASPTGTPPRAS 447

Query: 90  VAELPKAVRAHP 101
               P   RA P
Sbjct: 448 PTGTPS--RASP 457


>gi|169213800 PREDICTED: hypothetical protein [Homo sapiens]
          Length = 142

 Score = 28.5 bits (62), Expect = 2.8
 Identities = 19/57 (33%), Positives = 26/57 (45%), Gaps = 2/57 (3%)

Query: 48  PPSSRPRNASSTDNFHLASEKAAATQCQSMKAAAEAVPCRATVAELPKAVRAHPLHQ 104
           PP+S  +NA  T   H A  KA   Q +   +   + PC  T  +    V +HPL Q
Sbjct: 19  PPTSASQNAEITGVSHRAQSKAHNLQRKLRLSHKSSPPC--TYTQHAGGVDSHPLTQ 73


>gi|169214229 PREDICTED: hypothetical protein [Homo sapiens]
          Length = 142

 Score = 28.5 bits (62), Expect = 2.8
 Identities = 19/57 (33%), Positives = 26/57 (45%), Gaps = 2/57 (3%)

Query: 48  PPSSRPRNASSTDNFHLASEKAAATQCQSMKAAAEAVPCRATVAELPKAVRAHPLHQ 104
           PP+S  +NA  T   H A  KA   Q +   +   + PC  T  +    V +HPL Q
Sbjct: 19  PPTSASQNAEITGVSHRAQSKAHNLQRKLRLSHKSSPPC--TYTQHAGGVDSHPLTQ 73


>gi|169213573 PREDICTED: hypothetical protein [Homo sapiens]
          Length = 142

 Score = 28.5 bits (62), Expect = 2.8
 Identities = 19/57 (33%), Positives = 26/57 (45%), Gaps = 2/57 (3%)

Query: 48  PPSSRPRNASSTDNFHLASEKAAATQCQSMKAAAEAVPCRATVAELPKAVRAHPLHQ 104
           PP+S  +NA  T   H A  KA   Q +   +   + PC  T  +    V +HPL Q
Sbjct: 19  PPTSASQNAEITGVSHRAQSKAHNLQRKLRLSHKSSPPC--TYTQHAGGVDSHPLTQ 73


>gi|221139764 PHD and ring finger domains 1 [Homo sapiens]
          Length = 1648

 Score = 28.5 bits (62), Expect = 2.8
 Identities = 25/98 (25%), Positives = 46/98 (46%), Gaps = 13/98 (13%)

Query: 10  AKPSWRTSSKAVQRGNVGLEPPYRVPTGALPSGAVKRGPPSSRPRNASSTDNFHLASEKA 69
           A  S++ +S ++ RG  G +   +    ALPSG+  +GP  +RP++        L+ +  
Sbjct: 536 APVSFQRNSGSLSRGEEGFKGCLQ--PRALPSGSPAQGPSGNRPQSTG------LSCQGR 587

Query: 70  AATQCQSMKAAAEAVPCRATVAELPKAVRAHPLHQHAI 107
           + T  ++  A     P R  +   P AV+A  L   ++
Sbjct: 588 SRTPARTAGA-----PVRLDLPAAPGAVQARNLSNGSV 620


>gi|239756270 PREDICTED: StAR-related lipid transfer (START) domain
            containing 9 [Homo sapiens]
          Length = 4614

 Score = 28.1 bits (61), Expect = 3.6
 Identities = 21/84 (25%), Positives = 27/84 (32%), Gaps = 19/84 (22%)

Query: 24   GNVGLEPPYRVPTGALPSGAVKRGPPSSRPRNASSTDNFHLASEKAAATQCQSMKAAAEA 83
            G +G E P R P  AL      R P  SR                   T   S    +  
Sbjct: 2824 GGIGEEAPCRHPREALDGPVFSRNPEGSR-------------------TLSPSRGKESRT 2864

Query: 84   VPCRATVAELPKAVRAHPLHQHAI 107
            +PCR   +  P A  A+  H   +
Sbjct: 2865 LPCRQPCSSQPVATHAYSSHSSTL 2888


>gi|239750815 PREDICTED: StAR-related lipid transfer (START) domain
            containing 9 [Homo sapiens]
          Length = 4614

 Score = 28.1 bits (61), Expect = 3.6
 Identities = 21/84 (25%), Positives = 27/84 (32%), Gaps = 19/84 (22%)

Query: 24   GNVGLEPPYRVPTGALPSGAVKRGPPSSRPRNASSTDNFHLASEKAAATQCQSMKAAAEA 83
            G +G E P R P  AL      R P  SR                   T   S    +  
Sbjct: 2824 GGIGEEAPCRHPREALDGPVFSRNPEGSR-------------------TLSPSRGKESRT 2864

Query: 84   VPCRATVAELPKAVRAHPLHQHAI 107
            +PCR   +  P A  A+  H   +
Sbjct: 2865 LPCRQPCSSQPVATHAYSSHSSTL 2888


>gi|239745175 PREDICTED: StAR-related lipid transfer (START) domain
            containing 9 [Homo sapiens]
          Length = 4614

 Score = 28.1 bits (61), Expect = 3.6
 Identities = 21/84 (25%), Positives = 27/84 (32%), Gaps = 19/84 (22%)

Query: 24   GNVGLEPPYRVPTGALPSGAVKRGPPSSRPRNASSTDNFHLASEKAAATQCQSMKAAAEA 83
            G +G E P R P  AL      R P  SR                   T   S    +  
Sbjct: 2824 GGIGEEAPCRHPREALDGPVFSRNPEGSR-------------------TLSPSRGKESRT 2864

Query: 84   VPCRATVAELPKAVRAHPLHQHAI 107
            +PCR   +  P A  A+  H   +
Sbjct: 2865 LPCRQPCSSQPVATHAYSSHSSTL 2888


  Database: hs.faa
    Posted date:  Aug 4, 2009  4:42 PM
  Number of letters in database: 18,247,518
  Number of sequences in database:  37,866
  
Lambda     K      H
   0.320    0.134    0.429 

Gapped
Lambda     K      H
   0.267   0.0410    0.140 


Matrix: BLOSUM62
Gap Penalties: Existence: 11, Extension: 1
Number of Hits to DB: 6,891,939
Number of Sequences: 37866
Number of extensions: 309369
Number of successful extensions: 1338
Number of sequences better than 10.0: 30
Number of HSP's better than 10.0 without gapping: 13
Number of HSP's successfully gapped in prelim test: 55
Number of HSP's that attempted gapping in prelim test: 1303
Number of HSP's gapped (non-prelim): 84
length of query: 165
length of database: 18,247,518
effective HSP length: 94
effective length of query: 71
effective length of database: 14,688,114
effective search space: 1042856094
effective search space used: 1042856094
T: 11
A: 40
X1: 16 ( 7.4 bits)
X2: 38 (14.6 bits)
X3: 64 (24.7 bits)
S1: 41 (21.8 bits)
S2: 58 (26.9 bits)
Search results were obtained with NCBI BLAST and RefSeq entries.