LOC390561 20544

Name: LOC390561	Sequence: fasta or formatted (691aa)		NCBI GI: 239750798
Description: PREDICTED: similar to hect domain and RLD 2		Referenced in: Ubiquitin and Related Protein Modifications
Other entries for this name: alt prot [1052aa] PREDICTED: similar to hect domain and RLD 2 alt prot [1102aa] PREDICTED: similar to hect domain and RLD 2
Composition: Amino acid Percentage Count Longest homopolymer A alanine 8.0 55 3 C cysteine 1.7 12 1 D aspartate 3.5 24 2 E glutamate 10.3 71 2 F phenylalanine 1.9 13 1 G glycine 7.1 49 2 H histidine 3.0 21 2 I isoleucine 2.6 18 1 K lysine 7.5 52 3 L leucine 10.9 75 2 M methionine 0.9 6 1 N asparagine 3.2 22 2 P proline 6.2 43 2 Q glutamine 7.5 52 2 R arginine 5.8 40 2 S serine 8.2 57 3 T threonine 4.1 28 3 V valine 3.9 27 2 W tryptophan 1.2 8 1 X unknown 0.6 4 1 Y tyrosine 2.0 14 1			Comparative genomics: Search single species RefSeq proteins at NCBI H. sapiens M. musculus D. rerio C. intestinalis S. purpuratus D. melanogaster C. elegans A. thaliana S. cerevisiae E. coli W3110 A. pernix K1 Search summary Figure data Additional searches of RefSeq proteins at NCBI All Eukaryotes Bacteria Archaea Viruses Primates Mammals Vertebrates
Related human proteins: Protein Relative score Description Self-match 1.000 PREDICTED: similar to hect domain and RLD 2 LOC390561 0.962 PREDICTED: similar to hect domain and RLD 2 LOC390561 0.675 PREDICTED: similar to hect domain and RLD 2 LOC728498 0.574 PREDICTED: similar to Golgin subfamily A member 8-l... LOC653073 0.573 PREDICTED: Golgin subfamily A member 8-like protein... LOC653720 0.562 PREDICTED: similar to Golgin subfamily A member 8-l... LOC653125 0.560 PREDICTED: similar to Golgin subfamily A member 8-l... LOC728080 0.554 PREDICTED: similar to Golgin subfamily A member 8-l... LOC728047 0.554 PREDICTED: similar to Golgin subfamily A member 8-l... LOC727909 0.554 PREDICTED: similar to Golgin subfamily A member 8-l... LOC643699 0.544 PREDICTED: similar to golgi autoantigen, golgin sub... LOC653061 0.542 PREDICTED: similar to Golgin subfamily A member 8-l... LOC653061 0.536 PREDICTED: similar to Golgin subfamily A member 8-l... LOC728498 0.504 PREDICTED: similar to Golgin subfamily A member 8-l... LOC653073 0.502 PREDICTED: Golgin subfamily A member 8-like protein... LOC653061 0.501 PREDICTED: similar to Golgin subfamily A member 8-l... LOC643699 0.499 PREDICTED: similar to golgi autoantigen, golgin sub... LOC653720 0.493 PREDICTED: similar to Golgin subfamily A member 8-l... LOC653125 0.490 PREDICTED: similar to Golgin subfamily A member 8-l... LOC728080 0.489 PREDICTED: similar to Golgin subfamily A member 8-l... LOC728047 0.489 PREDICTED: similar to Golgin subfamily A member 8-l... LOC727909 0.489 PREDICTED: similar to Golgin subfamily A member 8-l... GOLGA8B 0.464 golgi autoantigen, golgin subfamily a, 8B GOLGA8A 0.464 golgi autoantigen, golgin subfamily a, 8A LOC653073 0.443 PREDICTED: Golgin subfamily A member 8-like protein... LOC653061 0.390 PREDICTED: similar to Golgin subfamily A member 8-l... GOLGA8G 0.339 golgi autoantigen, golgin subfamily a, 8G GOLGA8E 0.334 golgi autoantigen, golgin subfamily a, 8E LOC100292334 0.239 PREDICTED: similar to GOLGA8B protein, partial [Hom... GOLGA6C 0.195 PREDICTED: golgi autoantigen, golgin subfamily a, 6C... Human BLASTP results (used to prepare the table)

Gene descriptions are from NCBI RefSeq. Search results were obtained with NCBI BLAST and RefSeq entries. When identical proteins are present, the self-match may not be listed first in BLASTP output. In such cases, the table above has been reordered to place it first.

See About the Figures for the scoring system used in the figure above right. The same scoring system was used in the table of BLASTP results.