Home |
Table of Contents |
Search text |
Search genes |
Search sequences |
Purchase |
FAQ |
Blog |
Help
Search of human proteins with 239750752
BLASTP 2.2.11 [Jun-05-2005]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= gi|239750752 PREDICTED: hypothetical protein XP_002347494 [Homo
sapiens]
(120 letters)
Database: hs.faa
37,866 sequences; 18,247,518 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
gi|239756211 PREDICTED: similar to pre-B lymphocyte gene 2 [Homo... 248 8e-67
gi|239750752 PREDICTED: hypothetical protein XP_002347494 [Homo ... 248 8e-67
gi|239756207 PREDICTED: similar to pre-B lymphocyte gene 2 [Homo... 210 2e-55
gi|239750745 PREDICTED: hypothetical protein XP_002347495 [Homo ... 210 2e-55
gi|169217837 PREDICTED: similar to hCG1773549 [Homo sapiens] 199 5e-52
gi|239750758 PREDICTED: hypothetical protein XP_002347493 [Homo ... 190 2e-49
gi|169217835 PREDICTED: similar to hCG2038921 [Homo sapiens] 187 2e-48
gi|169207803 PREDICTED: similar to hCG2038921 [Homo sapiens] 187 2e-48
gi|239756219 PREDICTED: similar to hCG2029980 [Homo sapiens] 166 4e-42
gi|239750765 PREDICTED: hypothetical protein XP_002347528 [Homo ... 166 4e-42
gi|239750750 PREDICTED: hypothetical protein XP_002347524 [Homo ... 145 9e-36
gi|169207532 PREDICTED: similar to hCG2042717 [Homo sapiens] 138 1e-33
gi|239758119 PREDICTED: similar to hCG2042717 [Homo sapiens] 133 3e-32
gi|239745542 PREDICTED: similar to hCG1793095 [Homo sapiens] 132 6e-32
gi|239756213 PREDICTED: similar to hCG2042717 [Homo sapiens] 131 1e-31
gi|239750755 PREDICTED: hypothetical protein XP_002347525 [Homo ... 131 1e-31
gi|239750763 PREDICTED: hypothetical protein XP_002347527 [Homo ... 130 2e-31
gi|239745527 PREDICTED: hypothetical protein XP_002343511 [Homo ... 128 9e-31
gi|239745538 PREDICTED: similar to Ig heavy chain [Homo sapiens] 127 1e-30
gi|239750767 PREDICTED: hypothetical protein XP_002347529 [Homo ... 127 2e-30
gi|239752583 PREDICTED: hypothetical protein XP_002348171 [Homo ... 127 3e-30
gi|239750743 PREDICTED: hypothetical protein XP_002347522 [Homo ... 127 3e-30
gi|239745544 PREDICTED: hypothetical protein XP_002343513 [Homo ... 127 3e-30
gi|239758153 PREDICTED: similar to Ig heavy chain [Homo sapiens] 126 4e-30
gi|239756209 PREDICTED: hypothetical protein [Homo sapiens] 121 1e-28
gi|239750748 PREDICTED: hypothetical protein XP_002347523 [Homo ... 120 3e-28
gi|239756221 PREDICTED: similar to hCG2003024 [Homo sapiens] 117 2e-27
gi|239750773 PREDICTED: similar to hCG2003024 [Homo sapiens] 117 2e-27
gi|239745042 PREDICTED: similar to hCG2003024 [Homo sapiens] 116 3e-27
gi|239756205 PREDICTED: similar to hCG2029977 [Homo sapiens] 103 2e-23
>gi|239756211 PREDICTED: similar to pre-B lymphocyte gene 2 [Homo
sapiens]
Length = 120
Score = 248 bits (633), Expect = 8e-67
Identities = 120/120 (100%), Positives = 120/120 (100%)
Query: 1 MDWTWSILFLVAAATGAHSQVQLVQSGAEVKKPGASVKVSCKASGYTFTSYGISWVRQAP 60
MDWTWSILFLVAAATGAHSQVQLVQSGAEVKKPGASVKVSCKASGYTFTSYGISWVRQAP
Sbjct: 1 MDWTWSILFLVAAATGAHSQVQLVQSGAEVKKPGASVKVSCKASGYTFTSYGISWVRQAP 60
Query: 61 GQGLEWMGWISAYNGNTNYAQKLQGRVTMTTDTSTSTAYMELRSLRSDDTAVYYCARDTV 120
GQGLEWMGWISAYNGNTNYAQKLQGRVTMTTDTSTSTAYMELRSLRSDDTAVYYCARDTV
Sbjct: 61 GQGLEWMGWISAYNGNTNYAQKLQGRVTMTTDTSTSTAYMELRSLRSDDTAVYYCARDTV 120
>gi|239750752 PREDICTED: hypothetical protein XP_002347494 [Homo
sapiens]
Length = 120
Score = 248 bits (633), Expect = 8e-67
Identities = 120/120 (100%), Positives = 120/120 (100%)
Query: 1 MDWTWSILFLVAAATGAHSQVQLVQSGAEVKKPGASVKVSCKASGYTFTSYGISWVRQAP 60
MDWTWSILFLVAAATGAHSQVQLVQSGAEVKKPGASVKVSCKASGYTFTSYGISWVRQAP
Sbjct: 1 MDWTWSILFLVAAATGAHSQVQLVQSGAEVKKPGASVKVSCKASGYTFTSYGISWVRQAP 60
Query: 61 GQGLEWMGWISAYNGNTNYAQKLQGRVTMTTDTSTSTAYMELRSLRSDDTAVYYCARDTV 120
GQGLEWMGWISAYNGNTNYAQKLQGRVTMTTDTSTSTAYMELRSLRSDDTAVYYCARDTV
Sbjct: 61 GQGLEWMGWISAYNGNTNYAQKLQGRVTMTTDTSTSTAYMELRSLRSDDTAVYYCARDTV 120
>gi|239756207 PREDICTED: similar to pre-B lymphocyte gene 2 [Homo
sapiens]
Length = 120
Score = 210 bits (535), Expect = 2e-55
Identities = 102/120 (85%), Positives = 108/120 (90%)
Query: 1 MDWTWSILFLVAAATGAHSQVQLVQSGAEVKKPGASVKVSCKASGYTFTSYGISWVRQAP 60
MDWTW ILFLVAAAT AHSQVQLVQSGAEVKKPGASVKVSCKASGYTFTSY I+WVRQA
Sbjct: 1 MDWTWRILFLVAAATSAHSQVQLVQSGAEVKKPGASVKVSCKASGYTFTSYDINWVRQAT 60
Query: 61 GQGLEWMGWISAYNGNTNYAQKLQGRVTMTTDTSTSTAYMELRSLRSDDTAVYYCARDTV 120
GQGLEWMGW++ +GNT YAQK QGRVTMT +TS STAYMEL SLRS+DTAVYYCAR TV
Sbjct: 61 GQGLEWMGWMNPNSGNTGYAQKFQGRVTMTRNTSISTAYMELSSLRSEDTAVYYCARGTV 120
>gi|239750745 PREDICTED: hypothetical protein XP_002347495 [Homo
sapiens]
Length = 120
Score = 210 bits (535), Expect = 2e-55
Identities = 102/120 (85%), Positives = 108/120 (90%)
Query: 1 MDWTWSILFLVAAATGAHSQVQLVQSGAEVKKPGASVKVSCKASGYTFTSYGISWVRQAP 60
MDWTW ILFLVAAAT AHSQVQLVQSGAEVKKPGASVKVSCKASGYTFTSY I+WVRQA
Sbjct: 1 MDWTWRILFLVAAATSAHSQVQLVQSGAEVKKPGASVKVSCKASGYTFTSYDINWVRQAT 60
Query: 61 GQGLEWMGWISAYNGNTNYAQKLQGRVTMTTDTSTSTAYMELRSLRSDDTAVYYCARDTV 120
GQGLEWMGW++ +GNT YAQK QGRVTMT +TS STAYMEL SLRS+DTAVYYCAR TV
Sbjct: 61 GQGLEWMGWMNPNSGNTGYAQKFQGRVTMTRNTSISTAYMELSSLRSEDTAVYYCARGTV 120
>gi|169217837 PREDICTED: similar to hCG1773549 [Homo sapiens]
Length = 120
Score = 199 bits (505), Expect = 5e-52
Identities = 98/120 (81%), Positives = 103/120 (85%)
Query: 1 MDWTWSILFLVAAATGAHSQVQLVQSGAEVKKPGASVKVSCKASGYTFTSYGISWVRQAP 60
MDWTW LF+VAAATG SQVQLVQSGAEVKKPG+SVKVSCKASG TF+SY ISWVRQAP
Sbjct: 1 MDWTWRFLFVVAAATGVQSQVQLVQSGAEVKKPGSSVKVSCKASGGTFSSYAISWVRQAP 60
Query: 61 GQGLEWMGWISAYNGNTNYAQKLQGRVTMTTDTSTSTAYMELRSLRSDDTAVYYCARDTV 120
GQGLEWMG I G NYAQK QGRVT+T D STSTAYMEL SLRS+DTAVYYCARDTV
Sbjct: 61 GQGLEWMGGIIPIFGTANYAQKFQGRVTITADKSTSTAYMELSSLRSEDTAVYYCARDTV 120
>gi|239750758 PREDICTED: hypothetical protein XP_002347493 [Homo
sapiens]
Length = 120
Score = 190 bits (483), Expect = 2e-49
Identities = 94/120 (78%), Positives = 99/120 (82%)
Query: 1 MDWTWSILFLVAAATGAHSQVQLVQSGAEVKKPGASVKVSCKASGYTFTSYGISWVRQAP 60
MD TW ILFLVAAATG H+QVQLVQSGAEVKKPGASVKVSCK SGYT T + WVRQAP
Sbjct: 1 MDCTWRILFLVAAATGTHAQVQLVQSGAEVKKPGASVKVSCKVSGYTLTELSMHWVRQAP 60
Query: 61 GQGLEWMGWISAYNGNTNYAQKLQGRVTMTTDTSTSTAYMELRSLRSDDTAVYYCARDTV 120
G+GLEWMG +G T YAQK QGRVTMT DTST TAYMEL SLRS+DTAVYYCA DTV
Sbjct: 61 GKGLEWMGGFDPEDGETIYAQKFQGRVTMTEDTSTDTAYMELSSLRSEDTAVYYCATDTV 120
>gi|169217835 PREDICTED: similar to hCG2038921 [Homo sapiens]
Length = 120
Score = 187 bits (474), Expect = 2e-48
Identities = 89/120 (74%), Positives = 101/120 (84%)
Query: 1 MDWTWSILFLVAAATGAHSQVQLVQSGAEVKKPGASVKVSCKASGYTFTSYGISWVRQAP 60
MD TW IL LVAAATG H++VQLVQSGAEVKKPGA+VK+SCK SGYTFT Y + WV+QAP
Sbjct: 1 MDCTWRILLLVAAATGTHAEVQLVQSGAEVKKPGATVKISCKVSGYTFTDYYMHWVQQAP 60
Query: 61 GQGLEWMGWISAYNGNTNYAQKLQGRVTMTTDTSTSTAYMELRSLRSDDTAVYYCARDTV 120
G+GLEWMG + +G T YA+K QGRVT+T DTST TAYMEL SLRS+DTAVYYCA DTV
Sbjct: 61 GKGLEWMGLVDPEDGETIYAEKFQGRVTITADTSTDTAYMELSSLRSEDTAVYYCATDTV 120
>gi|169207803 PREDICTED: similar to hCG2038921 [Homo sapiens]
Length = 120
Score = 187 bits (474), Expect = 2e-48
Identities = 89/120 (74%), Positives = 101/120 (84%)
Query: 1 MDWTWSILFLVAAATGAHSQVQLVQSGAEVKKPGASVKVSCKASGYTFTSYGISWVRQAP 60
MD TW IL LVAAATG H++VQLVQSGAEVKKPGA+VK+SCK SGYTFT Y + WV+QAP
Sbjct: 1 MDCTWRILLLVAAATGTHAEVQLVQSGAEVKKPGATVKISCKVSGYTFTDYYMHWVQQAP 60
Query: 61 GQGLEWMGWISAYNGNTNYAQKLQGRVTMTTDTSTSTAYMELRSLRSDDTAVYYCARDTV 120
G+GLEWMG + +G T YA+K QGRVT+T DTST TAYMEL SLRS+DTAVYYCA DTV
Sbjct: 61 GKGLEWMGLVDPEDGETIYAEKFQGRVTITADTSTDTAYMELSSLRSEDTAVYYCATDTV 120
>gi|239756219 PREDICTED: similar to hCG2029980 [Homo sapiens]
Length = 129
Score = 166 bits (420), Expect = 4e-42
Identities = 84/114 (73%), Positives = 95/114 (83%)
Query: 7 ILFLVAAATGAHSQVQLVQSGAEVKKPGASVKVSCKASGYTFTSYGISWVRQAPGQGLEW 66
++FLVAAATG SQVQL QS AEVKKPGASVKVSCKASGYTFT + W++QAPGQGLE
Sbjct: 11 LIFLVAAATGVCSQVQLGQSEAEVKKPGASVKVSCKASGYTFTCCSLHWLQQAPGQGLER 70
Query: 67 MGWISAYNGNTNYAQKLQGRVTMTTDTSTSTAYMELRSLRSDDTAVYYCARDTV 120
M WI+ YNGNTNYA+K QGRVT+T D S TAY+EL SLRS+D+AVYY AR TV
Sbjct: 71 MRWITLYNGNTNYAKKFQGRVTITRDMSLRTAYIELSSLRSEDSAVYYWARYTV 124
>gi|239750765 PREDICTED: hypothetical protein XP_002347528 [Homo
sapiens]
Length = 129
Score = 166 bits (420), Expect = 4e-42
Identities = 84/114 (73%), Positives = 95/114 (83%)
Query: 7 ILFLVAAATGAHSQVQLVQSGAEVKKPGASVKVSCKASGYTFTSYGISWVRQAPGQGLEW 66
++FLVAAATG SQVQL QS AEVKKPGASVKVSCKASGYTFT + W++QAPGQGLE
Sbjct: 11 LIFLVAAATGVCSQVQLGQSEAEVKKPGASVKVSCKASGYTFTCCSLHWLQQAPGQGLER 70
Query: 67 MGWISAYNGNTNYAQKLQGRVTMTTDTSTSTAYMELRSLRSDDTAVYYCARDTV 120
M WI+ YNGNTNYA+K QGRVT+T D S TAY+EL SLRS+D+AVYY AR TV
Sbjct: 71 MRWITLYNGNTNYAKKFQGRVTITRDMSLRTAYIELSSLRSEDSAVYYWARYTV 124
>gi|239750750 PREDICTED: hypothetical protein XP_002347524 [Homo
sapiens]
Length = 202
Score = 145 bits (365), Expect = 9e-36
Identities = 73/120 (60%), Positives = 91/120 (75%), Gaps = 1/120 (0%)
Query: 1 MDWTWSILFLVAAATGAHSQVQLVQSGAEVKKPGASVKVSCKASGYTFTSYGISWVRQAP 60
M++ S +FL A G +VQLV+SG + KPG S+++SC ASG+TF++ +SWVRQAP
Sbjct: 1 MEFGLSWIFLAAILKGVQCEVQLVESGGGLVKPGGSLRLSCAASGFTFSNAWMSWVRQAP 60
Query: 61 GQGLEWMGWISAYNGNTNYAQKLQGRVTMTTDTSTSTAYMELRSLRSDDTAVYY-CARDT 119
G+GLEW+G + NGNT YAQK QGRVTMT DTSTSTAYMEL S RS+D VYY CA+DT
Sbjct: 61 GKGLEWVGRSYSGNGNTGYAQKFQGRVTMTRDTSTSTAYMELSSQRSEDIDVYYCCAQDT 120
>gi|169207532 PREDICTED: similar to hCG2042717 [Homo sapiens]
Length = 218
Score = 138 bits (347), Expect = 1e-33
Identities = 65/120 (54%), Positives = 89/120 (74%)
Query: 1 MDWTWSILFLVAAATGAHSQVQLVQSGAEVKKPGASVKVSCKASGYTFTSYGISWVRQAP 60
M++ S +FLVA G QVQLV+SG V +PG S+++SC ASG+TF+SYG+ WVRQAP
Sbjct: 46 MEFGLSWVFLVALLRGVQCQVQLVESGGGVVQPGRSLRLSCAASGFTFSSYGMHWVRQAP 105
Query: 61 GQGLEWMGWISAYNGNTNYAQKLQGRVTMTTDTSTSTAYMELRSLRSDDTAVYYCARDTV 120
G+GLEW+ IS N YA ++GR T++ D S +T Y+++ SLR++DTAVYYCA+DTV
Sbjct: 106 GKGLEWVAVISYDGSNKYYADSVKGRFTISRDNSKNTLYLQMNSLRAEDTAVYYCAKDTV 165
>gi|239758119 PREDICTED: similar to hCG2042717 [Homo sapiens]
Length = 196
Score = 133 bits (335), Expect = 3e-32
Identities = 58/111 (52%), Positives = 86/111 (77%)
Query: 10 LVAAATGAHSQVQLVQSGAEVKKPGASVKVSCKASGYTFTSYGISWVRQAPGQGLEWMGW 69
+V+ G QVQLV+SG + KPG S+++SC ASG+TF+ Y +SW+RQAPG+GLEW+ +
Sbjct: 20 VVSVFAGVQCQVQLVESGGGLVKPGGSLRLSCAASGFTFSDYYMSWIRQAPGKGLEWVSY 79
Query: 70 ISAYNGNTNYAQKLQGRVTMTTDTSTSTAYMELRSLRSDDTAVYYCARDTV 120
IS+ + TNYA ++GR T++ D + ++ Y+++ SLR++DTAVYYCARDTV
Sbjct: 80 ISSSSSYTNYADSVKGRFTISRDNAKNSLYLQMNSLRAEDTAVYYCARDTV 130
>gi|239745542 PREDICTED: similar to hCG1793095 [Homo sapiens]
Length = 148
Score = 132 bits (332), Expect = 6e-32
Identities = 62/120 (51%), Positives = 89/120 (74%)
Query: 1 MDWTWSILFLVAAATGAHSQVQLVQSGAEVKKPGASVKVSCKASGYTFTSYGISWVRQAP 60
M++ S +FLVA G H +VQLV+SG + +PG +K+S ASG+T S+ +SW+ QAP
Sbjct: 1 MEFELSWVFLVAILQGVHCEVQLVESGRGLAQPGGYLKLSGAASGFTVGSWYMSWIHQAP 60
Query: 61 GQGLEWMGWISAYNGNTNYAQKLQGRVTMTTDTSTSTAYMELRSLRSDDTAVYYCARDTV 120
G+GLEW+ +IS+ +TNYA ++GR T++TD S +T Y+++ SLR +DTAVYYCARDTV
Sbjct: 61 GKGLEWVSYISSSGCSTNYADSVKGRFTISTDNSKNTLYLQMNSLRVEDTAVYYCARDTV 120
>gi|239756213 PREDICTED: similar to hCG2042717 [Homo sapiens]
Length = 256
Score = 131 bits (330), Expect = 1e-31
Identities = 59/113 (52%), Positives = 86/113 (76%)
Query: 8 LFLVAAATGAHSQVQLVQSGAEVKKPGASVKVSCKASGYTFTSYGISWVRQAPGQGLEWM 67
+FLVA G +VQLV+SG + KPG S+++SC ASG+TF+SY ++WVRQAPG+GLEW+
Sbjct: 32 VFLVAILEGVQCEVQLVESGGGLVKPGGSLRLSCAASGFTFSSYSMNWVRQAPGKGLEWV 91
Query: 68 GWISAYNGNTNYAQKLQGRVTMTTDTSTSTAYMELRSLRSDDTAVYYCARDTV 120
IS+ + YA ++GR T++ D + ++ Y+++ SLR++DTAVYYCARDTV
Sbjct: 92 SSISSSSSYIYYADSVKGRFTISRDNAKNSLYLQMNSLRAEDTAVYYCARDTV 144
>gi|239750755 PREDICTED: hypothetical protein XP_002347525 [Homo
sapiens]
Length = 232
Score = 131 bits (330), Expect = 1e-31
Identities = 59/113 (52%), Positives = 86/113 (76%)
Query: 8 LFLVAAATGAHSQVQLVQSGAEVKKPGASVKVSCKASGYTFTSYGISWVRQAPGQGLEWM 67
+FLVA G +VQLV+SG + KPG S+++SC ASG+TF+SY ++WVRQAPG+GLEW+
Sbjct: 8 VFLVAILEGVQCEVQLVESGGGLVKPGGSLRLSCAASGFTFSSYSMNWVRQAPGKGLEWV 67
Query: 68 GWISAYNGNTNYAQKLQGRVTMTTDTSTSTAYMELRSLRSDDTAVYYCARDTV 120
IS+ + YA ++GR T++ D + ++ Y+++ SLR++DTAVYYCARDTV
Sbjct: 68 SSISSSSSYIYYADSVKGRFTISRDNAKNSLYLQMNSLRAEDTAVYYCARDTV 120
>gi|239750763 PREDICTED: hypothetical protein XP_002347527 [Homo
sapiens]
Length = 183
Score = 130 bits (327), Expect = 2e-31
Identities = 61/119 (51%), Positives = 89/119 (74%)
Query: 1 MDWTWSILFLVAAATGAHSQVQLVQSGAEVKKPGASVKVSCKASGYTFTSYGISWVRQAP 60
M++ S +FLVA G +VQLV+SG + +PG S+++SC ASG+TF+SY + WVRQAP
Sbjct: 2 MEFGLSWVFLVAIFKGVQCEVQLVESGEGLVQPGGSLRLSCAASGFTFSSYAMHWVRQAP 61
Query: 61 GQGLEWMGWISAYNGNTNYAQKLQGRVTMTTDTSTSTAYMELRSLRSDDTAVYYCARDT 119
G+GLE++ IS+ G+T YA ++GR T++ D S +T Y+++ SLR++D AVYYCARDT
Sbjct: 62 GKGLEYVSAISSNGGSTYYADSVKGRFTISRDNSKNTLYLQMGSLRAEDMAVYYCARDT 120
>gi|239745527 PREDICTED: hypothetical protein XP_002343511 [Homo
sapiens]
Length = 147
Score = 128 bits (322), Expect = 9e-31
Identities = 60/120 (50%), Positives = 86/120 (71%), Gaps = 1/120 (0%)
Query: 1 MDWTWSILFLVAAATGAHSQVQLVQSGAEVKKPGASVKVSCKASGYTFTSYGISWVRQAP 60
M++ S +FLVA G +VQLVQSG + +PG S+++SC SG+TF+SY + WVRQAP
Sbjct: 1 MEFVLSWVFLVAILKGVQCEVQLVQSGGGLVQPGGSLRLSCAGSGFTFSSYAMHWVRQAP 60
Query: 61 GQGLEWMGWISAYNGNTNYAQKLQGRVTMTTDTSTSTAYMELRSLRSDDTAVYYCARDTV 120
G+GLEW+ I G T YA ++GR T++ D + ++ Y+++ SLR++D AVYYCARDTV
Sbjct: 61 GKGLEWVSAIGT-GGGTYYADSVKGRFTISRDNAKNSLYLQMNSLRAEDMAVYYCARDTV 119
>gi|239745538 PREDICTED: similar to Ig heavy chain [Homo sapiens]
Length = 356
Score = 127 bits (320), Expect = 1e-30
Identities = 60/120 (50%), Positives = 85/120 (70%), Gaps = 1/120 (0%)
Query: 1 MDWTWSILFLVAAATGAHSQVQLVQSGAEVKKPGASVKVSCKASGYTFTSYGISWVRQAP 60
M++ S +FLVA G +VQLVQSG + PG S+++SC SG+TF+SY + WVRQAP
Sbjct: 1 MEFVLSWVFLVAILKGVQCEVQLVQSGGGLVHPGGSLRLSCAGSGFTFSSYAMHWVRQAP 60
Query: 61 GQGLEWMGWISAYNGNTNYAQKLQGRVTMTTDTSTSTAYMELRSLRSDDTAVYYCARDTV 120
G+GLEW+ I G T YA ++GR T++ D + ++ Y+++ SLR++D AVYYCARDTV
Sbjct: 61 GKGLEWVSAIGT-GGGTYYADSVKGRFTISRDNAKNSLYLQMNSLRAEDMAVYYCARDTV 119
Score = 67.0 bits (162), Expect = 3e-12
Identities = 36/50 (72%), Positives = 38/50 (76%), Gaps = 2/50 (4%)
Query: 13 AATGAHSQVQLVQSGAEVKKPGASVKVSCKASGYTFTSYGISW--VRQAP 60
A GAH VQLVQSGAEVKKPGASVKVSC+ASGYTFT + W VR P
Sbjct: 245 AEMGAHFLVQLVQSGAEVKKPGASVKVSCQASGYTFTYCYLHWALVRSHP 294
>gi|239750767 PREDICTED: hypothetical protein XP_002347529 [Homo
sapiens]
Length = 184
Score = 127 bits (319), Expect = 2e-30
Identities = 60/115 (52%), Positives = 86/115 (74%), Gaps = 1/115 (0%)
Query: 6 SILFLVAAATGAHSQVQLVQSGAEVKKPGASVKVSCKASGYTFTSYGISWVRQAPGQGLE 65
S LFLVA G +VQLV+SG + KPG S+++SC ASG+TF+ Y ++WVRQAPG+GLE
Sbjct: 27 SWLFLVAILKGVQCEVQLVESGGGLVKPGGSLRLSCAASGFTFSDYYMNWVRQAPGKGLE 86
Query: 66 WMGWISAYNGNTNYAQKLQGRVTMTTDTSTSTAYMELRSLRSDDTAVYYCARDTV 120
W+ IS+ + YA ++GR T++ D + ++ Y+++ SLR++DTAVYYCARDTV
Sbjct: 87 WVSSISS-SSTIYYADSVKGRFTISRDNAKNSLYLQMNSLRAEDTAVYYCARDTV 140
>gi|239752583 PREDICTED: hypothetical protein XP_002348171 [Homo
sapiens]
Length = 146
Score = 127 bits (318), Expect = 3e-30
Identities = 57/120 (47%), Positives = 88/120 (73%)
Query: 1 MDWTWSILFLVAAATGAHSQVQLVQSGAEVKKPGASVKVSCKASGYTFTSYGISWVRQAP 60
M++ S +FLVA G +VQLV+SG + +PG S+++SC ASG+TF+SY + WVRQAP
Sbjct: 1 MEFGLSWVFLVAILKGVQCEVQLVESGGGLVQPGGSLRLSCAASGFTFSSYWMHWVRQAP 60
Query: 61 GQGLEWMGWISAYNGNTNYAQKLQGRVTMTTDTSTSTAYMELRSLRSDDTAVYYCARDTV 120
G+GL W+ I++ +T+YA ++G+ T++ D + +T Y+++ SLR++D AVYYC RDTV
Sbjct: 61 GKGLVWVSRINSDGSSTSYADSMKGQFTISRDNAKNTLYLQMNSLRAEDMAVYYCTRDTV 120
>gi|239750743 PREDICTED: hypothetical protein XP_002347522 [Homo
sapiens]
Length = 172
Score = 127 bits (318), Expect = 3e-30
Identities = 59/120 (49%), Positives = 85/120 (70%)
Query: 1 MDWTWSILFLVAAATGAHSQVQLVQSGAEVKKPGASVKVSCKASGYTFTSYGISWVRQAP 60
M+ S +FLVA G +VQLV+SG + +PG S+++SC ASG+TF+SY +SWVRQAP
Sbjct: 1 MELGLSWVFLVAILEGVQCEVQLVESGGGLVQPGGSLRLSCAASGFTFSSYWMSWVRQAP 60
Query: 61 GQGLEWMGWISAYNGNTNYAQKLQGRVTMTTDTSTSTAYMELRSLRSDDTAVYYCARDTV 120
G+GLEW+ I Y ++GR T++ D + ++ Y+++ SLR++DTAVYYCARDTV
Sbjct: 61 GKGLEWVANIKQDGSEKYYVDSVKGRFTISRDNAKNSLYLQMNSLRAEDTAVYYCARDTV 120
>gi|239745544 PREDICTED: hypothetical protein XP_002343513 [Homo
sapiens]
Length = 146
Score = 127 bits (318), Expect = 3e-30
Identities = 57/120 (47%), Positives = 88/120 (73%)
Query: 1 MDWTWSILFLVAAATGAHSQVQLVQSGAEVKKPGASVKVSCKASGYTFTSYGISWVRQAP 60
M++ S +FLVA G +VQLV+SG + +PG S+++SC ASG+TF+SY + WVRQAP
Sbjct: 1 MEFGLSWVFLVAILKGVQCEVQLVESGGGLVQPGGSLRLSCAASGFTFSSYWMHWVRQAP 60
Query: 61 GQGLEWMGWISAYNGNTNYAQKLQGRVTMTTDTSTSTAYMELRSLRSDDTAVYYCARDTV 120
G+GL W+ I++ +T+YA ++G+ T++ D + +T Y+++ SLR++D AVYYC RDTV
Sbjct: 61 GKGLVWVSRINSDGSSTSYADSMKGQFTISRDNAKNTLYLQMNSLRAEDMAVYYCTRDTV 120
>gi|239758153 PREDICTED: similar to Ig heavy chain [Homo sapiens]
Length = 214
Score = 126 bits (316), Expect = 4e-30
Identities = 59/119 (49%), Positives = 84/119 (70%), Gaps = 1/119 (0%)
Query: 1 MDWTWSILFLVAAATGAHSQVQLVQSGAEVKKPGASVKVSCKASGYTFTSYGISWVRQAP 60
M++ S +FLVA G +VQLVQSG + PG S+++SC SG+TF+SY + WVRQAP
Sbjct: 1 MEFVLSWVFLVAILKGVQCEVQLVQSGGGLVHPGGSLRLSCAGSGFTFSSYAMHWVRQAP 60
Query: 61 GQGLEWMGWISAYNGNTNYAQKLQGRVTMTTDTSTSTAYMELRSLRSDDTAVYYCARDT 119
G+GLEW+ I G T YA ++GR T++ D + ++ Y+++ SLR++D AVYYCARDT
Sbjct: 61 GKGLEWVSAIGT-GGGTYYADSVKGRFTISRDNAKNSLYLQMNSLRAEDMAVYYCARDT 118
>gi|239756209 PREDICTED: hypothetical protein [Homo sapiens]
Length = 147
Score = 121 bits (304), Expect = 1e-28
Identities = 54/119 (45%), Positives = 84/119 (70%)
Query: 1 MDWTWSILFLVAAATGAHSQVQLVQSGAEVKKPGASVKVSCKASGYTFTSYGISWVRQAP 60
M+ S +FL+A G +VQLV+SG + +PG S+++SC ASG+TF Y + WVRQAP
Sbjct: 1 MELGLSWIFLLAILKGVQCEVQLVESGGGLVQPGRSLRLSCAASGFTFDDYAMHWVRQAP 60
Query: 61 GQGLEWMGWISAYNGNTNYAQKLQGRVTMTTDTSTSTAYMELRSLRSDDTAVYYCARDT 119
G+GLEW+ IS +G+ YA ++GR T++ D + ++ Y+++ SLR++DTA+YYC R +
Sbjct: 61 GKGLEWVSGISWNSGSIGYADSVKGRFTISRDNAKNSLYLQMNSLRAEDTALYYCGRSS 119
>gi|239750748 PREDICTED: hypothetical protein XP_002347523 [Homo
sapiens]
Length = 260
Score = 120 bits (300), Expect = 3e-28
Identities = 58/120 (48%), Positives = 85/120 (70%), Gaps = 1/120 (0%)
Query: 1 MDWTWSILFLVAAATGAHSQVQLVQSGAEVKKPGASVKVSCKASGYTFTSYGISWVRQAP 60
M+ S +FLVA G +VQLV+SG + +PG S+++SC ASG+TF+SY + WVRQA
Sbjct: 114 MELGLSWVFLVAILEGVQCEVQLVESGGGLVQPGGSLRLSCAASGFTFSSYDMHWVRQAT 173
Query: 61 GQGLEWMGWISAYNGNTNYAQKLQGRVTMTTDTSTSTAYMELRSLRSDDTAVYYCARDTV 120
G+GLEW+ I G+T Y ++GR T++ + + ++ Y+++ SLR+ DTAVYYCARDTV
Sbjct: 174 GKGLEWVSAIGT-AGDTYYPGSVKGRFTISRENAKNSLYLQMNSLRAGDTAVYYCARDTV 232
>gi|239756221 PREDICTED: similar to hCG2003024 [Homo sapiens]
Length = 135
Score = 117 bits (294), Expect = 2e-27
Identities = 58/122 (47%), Positives = 88/122 (72%), Gaps = 2/122 (1%)
Query: 1 MDWTWSILFLVAAATGAHSQVQLVQSGAEVKKPGASVKVSCKASGYTFTSYGISWVRQAP 60
M++ S +FLVA G +VQLV+SG + +PG S+++SC ASG+TF+ + +SWVRQA
Sbjct: 1 MEFGLSWVFLVAILKGVQCEVQLVESGGGLVQPGGSLRLSCAASGFTFSDHYMSWVRQAQ 60
Query: 61 GQGLEWMGWI--SAYNGNTNYAQKLQGRVTMTTDTSTSTAYMELRSLRSDDTAVYYCARD 118
G+GLE +G I A + T YA ++GR+T++ + S +T Y+++ SL+++D AVYYCARD
Sbjct: 61 GKGLELVGLIRNKANSYTTEYAASVKGRLTISREDSKNTLYLQMSSLKTEDLAVYYCARD 120
Query: 119 TV 120
TV
Sbjct: 121 TV 122
>gi|239750773 PREDICTED: similar to hCG2003024 [Homo sapiens]
Length = 181
Score = 117 bits (294), Expect = 2e-27
Identities = 58/122 (47%), Positives = 88/122 (72%), Gaps = 2/122 (1%)
Query: 1 MDWTWSILFLVAAATGAHSQVQLVQSGAEVKKPGASVKVSCKASGYTFTSYGISWVRQAP 60
M++ S +FLVA G +VQLV+SG + +PG S+++SC ASG+TF+ + +SWVRQA
Sbjct: 1 MEFGLSWVFLVAILKGVQCEVQLVESGGGLVQPGGSLRLSCAASGFTFSDHYMSWVRQAQ 60
Query: 61 GQGLEWMGWI--SAYNGNTNYAQKLQGRVTMTTDTSTSTAYMELRSLRSDDTAVYYCARD 118
G+GLE +G I A + T YA ++GR+T++ + S +T Y+++ SL+++D AVYYCARD
Sbjct: 61 GKGLELVGLIRNKANSYTTEYAASVKGRLTISREDSKNTLYLQMSSLKTEDLAVYYCARD 120
Query: 119 TV 120
TV
Sbjct: 121 TV 122
>gi|239745042 PREDICTED: similar to hCG2003024 [Homo sapiens]
Length = 181
Score = 116 bits (291), Expect = 3e-27
Identities = 57/122 (46%), Positives = 88/122 (72%), Gaps = 2/122 (1%)
Query: 1 MDWTWSILFLVAAATGAHSQVQLVQSGAEVKKPGASVKVSCKASGYTFTSYGISWVRQAP 60
M++ S +FLVA G +VQLV+SG + +PG S+++SC ASG+TF+ + +SWVRQA
Sbjct: 1 MEFGLSWVFLVAILKGVQCEVQLVESGGGLVQPGGSLRLSCAASGFTFSDHYMSWVRQAQ 60
Query: 61 GQGLEWMGWI--SAYNGNTNYAQKLQGRVTMTTDTSTSTAYMELRSLRSDDTAVYYCARD 118
G+GLE +G I A + T YA ++GR+T++ + S +T Y+++ +L+++D AVYYCARD
Sbjct: 61 GKGLELVGLIRNKANSYTTEYAASVKGRLTISREDSKNTLYLQMSNLKTEDLAVYYCARD 120
Query: 119 TV 120
TV
Sbjct: 121 TV 122
>gi|239756205 PREDICTED: similar to hCG2029977 [Homo sapiens]
Length = 259
Score = 103 bits (258), Expect = 2e-23
Identities = 57/121 (47%), Positives = 78/121 (64%), Gaps = 2/121 (1%)
Query: 1 MDWTWSILFLVAAATGAHSQVQLVQSGAEVKKPGASVKVSCKASGYTFTSYGI-SWVRQA 59
M W L LVAA SQVQL +SG + KP ++ ++C SG + +S SWVRQ
Sbjct: 121 MKHLWFFLLLVAAPRWVLSQVQLQESGPGLVKPSGTLSLTCAVSGGSISSSNWWSWVRQP 180
Query: 60 PGQGLEWMGWISAYNGNTNYAQKLQGRVTMTTDTSTSTAYMELRSLRSDDTAVYYCARDT 119
PG+GLEW+G I ++G+TNY L+ RVT++ D S + ++L S+ + DTAVYYCARDT
Sbjct: 181 PGKGLEWIGEIY-HSGSTNYNPSLKSRVTISVDKSKNQFSLKLSSVTAADTAVYYCARDT 239
Query: 120 V 120
V
Sbjct: 240 V 240
Database: hs.faa
Posted date: Aug 4, 2009 4:42 PM
Number of letters in database: 18,247,518
Number of sequences in database: 37,866
Lambda K H
0.316 0.125 0.388
Gapped
Lambda K H
0.267 0.0410 0.140
Matrix: BLOSUM62
Gap Penalties: Existence: 11, Extension: 1
Number of Hits to DB: 4,387,613
Number of Sequences: 37866
Number of extensions: 154849
Number of successful extensions: 505
Number of sequences better than 10.0: 30
Number of HSP's better than 10.0 without gapping: 55
Number of HSP's successfully gapped in prelim test: 40
Number of HSP's that attempted gapping in prelim test: 414
Number of HSP's gapped (non-prelim): 99
length of query: 120
length of database: 18,247,518
effective HSP length: 89
effective length of query: 31
effective length of database: 14,877,444
effective search space: 461200764
effective search space used: 461200764
T: 11
A: 40
X1: 16 ( 7.3 bits)
X2: 38 (14.6 bits)
X3: 64 (24.7 bits)
S1: 41 (21.7 bits)
S2: 55 (25.8 bits)
Search results were obtained with NCBI BLAST and RefSeq entries.
Home |
Table of Contents |
Search text |
Search genes |
Search sequences |
Purchase |
FAQ |
Blog |
Help
Guide to the Human Genome
Copyright © 2010 by Stewart Scherer. All rights reserved.