Home |
Table of Contents |
Search text |
Search genes |
Search sequences |
Purchase |
FAQ |
Blog |
Help
Search of human proteins with 239750699
BLASTP 2.2.11 [Jun-05-2005]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= gi|239750699 PREDICTED: hypothetical protein XP_002347487 [Homo
sapiens]
(155 letters)
Database: hs.faa
37,866 sequences; 18,247,518 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
gi|239750699 PREDICTED: hypothetical protein XP_002347487 [Homo ... 310 4e-85
gi|239756144 PREDICTED: hypothetical protein [Homo sapiens] 305 1e-83
gi|239745007 PREDICTED: hypothetical protein XP_002343295 [Homo ... 305 1e-83
gi|239757942 PREDICTED: hypothetical protein XP_002346387 [Homo ... 37 0.009
gi|239756183 PREDICTED: hypothetical protein [Homo sapiens] 35 0.026
gi|239750714 PREDICTED: hypothetical protein [Homo sapiens] 35 0.026
gi|239745020 PREDICTED: hypothetical protein XP_002343333 [Homo ... 35 0.026
gi|239750574 PREDICTED: hypothetical protein [Homo sapiens] 35 0.034
gi|169205732 PREDICTED: hypothetical protein [Homo sapiens] 35 0.034
gi|239751471 PREDICTED: hypothetical protein XP_002347846 [Homo ... 34 0.044
gi|47419907 T-box 3 protein isoform 2 [Homo sapiens] 34 0.058
gi|47419905 T-box 3 protein isoform 1 [Homo sapiens] 34 0.058
gi|47271406 bin3, bicoid-interacting 3 [Homo sapiens] 33 0.13
gi|169161029 PREDICTED: hypothetical protein [Homo sapiens] 32 0.17
gi|169210192 PREDICTED: hypothetical protein [Homo sapiens] 32 0.29
gi|113425957 PREDICTED: hypothetical protein [Homo sapiens] 32 0.29
gi|239754657 PREDICTED: hypothetical protein XP_002346062 [Homo ... 31 0.37
gi|239743279 PREDICTED: hypothetical protein XP_002342816 [Homo ... 31 0.37
gi|239508962 PREDICTED: hypothetical protein [Homo sapiens] 31 0.37
gi|157694497 zinc finger and BTB domain containing 10 isoform b ... 31 0.37
gi|157694499 zinc finger and BTB domain containing 10 isoform a ... 31 0.37
gi|134142824 forkhead box D2 [Homo sapiens] 31 0.49
gi|239755255 PREDICTED: hypothetical protein [Homo sapiens] 30 0.83
gi|239754489 PREDICTED: hypothetical protein [Homo sapiens] 30 0.83
gi|239754110 PREDICTED: hypothetical protein XP_002345881 [Homo ... 30 0.83
gi|239749748 PREDICTED: hypothetical protein XP_002347156 [Homo ... 30 0.83
gi|239744003 PREDICTED: hypothetical protein XP_002343004 [Homo ... 30 0.83
gi|239743069 PREDICTED: hypothetical protein XP_002342750 [Homo ... 30 0.83
gi|239508715 PREDICTED: hypothetical protein [Homo sapiens] 30 0.83
gi|51317366 myosin XVIIIB [Homo sapiens] 30 0.83
>gi|239750699 PREDICTED: hypothetical protein XP_002347487 [Homo
sapiens]
Length = 155
Score = 310 bits (793), Expect = 4e-85
Identities = 155/155 (100%), Positives = 155/155 (100%)
Query: 1 MAHVPLLRGRRGRECAARGGARRAPGGEGRRPGRASQEVGLPHHQAGRAPAAAATTVQGP 60
MAHVPLLRGRRGRECAARGGARRAPGGEGRRPGRASQEVGLPHHQAGRAPAAAATTVQGP
Sbjct: 1 MAHVPLLRGRRGRECAARGGARRAPGGEGRRPGRASQEVGLPHHQAGRAPAAAATTVQGP 60
Query: 61 VDKVEVALGLAAQQVALDAVRQRVVRQLEAAPVHQHEQPVRLRPLHRELLRALRAQRLGL 120
VDKVEVALGLAAQQVALDAVRQRVVRQLEAAPVHQHEQPVRLRPLHRELLRALRAQRLGL
Sbjct: 61 VDKVEVALGLAAQQVALDAVRQRVVRQLEAAPVHQHEQPVRLRPLHRELLRALRAQRLGL 120
Query: 121 GVRPRRQRPRLLLGLQVRHADEASPVRRSGRPGPC 155
GVRPRRQRPRLLLGLQVRHADEASPVRRSGRPGPC
Sbjct: 121 GVRPRRQRPRLLLGLQVRHADEASPVRRSGRPGPC 155
>gi|239756144 PREDICTED: hypothetical protein [Homo sapiens]
Length = 156
Score = 305 bits (781), Expect = 1e-83
Identities = 155/156 (99%), Positives = 155/156 (99%), Gaps = 1/156 (0%)
Query: 1 MAHVPLLRGRRGRECAARGGARRAPGGEGRRPGRASQEVGLPHHQAGRAPAAAATT-VQG 59
MAHVPLLRGRRGRECAARGGARRAPGGEGRRPGRASQEVGLPHHQAGRAPAAAATT VQG
Sbjct: 1 MAHVPLLRGRRGRECAARGGARRAPGGEGRRPGRASQEVGLPHHQAGRAPAAAATTTVQG 60
Query: 60 PVDKVEVALGLAAQQVALDAVRQRVVRQLEAAPVHQHEQPVRLRPLHRELLRALRAQRLG 119
PVDKVEVALGLAAQQVALDAVRQRVVRQLEAAPVHQHEQPVRLRPLHRELLRALRAQRLG
Sbjct: 61 PVDKVEVALGLAAQQVALDAVRQRVVRQLEAAPVHQHEQPVRLRPLHRELLRALRAQRLG 120
Query: 120 LGVRPRRQRPRLLLGLQVRHADEASPVRRSGRPGPC 155
LGVRPRRQRPRLLLGLQVRHADEASPVRRSGRPGPC
Sbjct: 121 LGVRPRRQRPRLLLGLQVRHADEASPVRRSGRPGPC 156
>gi|239745007 PREDICTED: hypothetical protein XP_002343295 [Homo
sapiens]
Length = 156
Score = 305 bits (781), Expect = 1e-83
Identities = 155/156 (99%), Positives = 155/156 (99%), Gaps = 1/156 (0%)
Query: 1 MAHVPLLRGRRGRECAARGGARRAPGGEGRRPGRASQEVGLPHHQAGRAPAAAA-TTVQG 59
MAHVPLLRGRRGRECAARGGARRAPGGEGRRPGRASQEVGLPHHQAGRAPAAAA TTVQG
Sbjct: 1 MAHVPLLRGRRGRECAARGGARRAPGGEGRRPGRASQEVGLPHHQAGRAPAAAAATTVQG 60
Query: 60 PVDKVEVALGLAAQQVALDAVRQRVVRQLEAAPVHQHEQPVRLRPLHRELLRALRAQRLG 119
PVDKVEVALGLAAQQVALDAVRQRVVRQLEAAPVHQHEQPVRLRPLHRELLRALRAQRLG
Sbjct: 61 PVDKVEVALGLAAQQVALDAVRQRVVRQLEAAPVHQHEQPVRLRPLHRELLRALRAQRLG 120
Query: 120 LGVRPRRQRPRLLLGLQVRHADEASPVRRSGRPGPC 155
LGVRPRRQRPRLLLGLQVRHADEASPVRRSGRPGPC
Sbjct: 121 LGVRPRRQRPRLLLGLQVRHADEASPVRRSGRPGPC 156
>gi|239757942 PREDICTED: hypothetical protein XP_002346387 [Homo
sapiens]
Length = 239
Score = 36.6 bits (83), Expect = 0.009
Identities = 36/122 (29%), Positives = 45/122 (36%), Gaps = 7/122 (5%)
Query: 8 RGRRGRECAARGGARRAPGGEGRRPGRASQEVGLPHHQAGRAPAAAATTVQGPVDKVEVA 67
R R+ + GG PG GR GR+ VG GR P+ + Q P +
Sbjct: 101 RPRQASQTRGGGGGPSLPGPAGRPSGRSRSRVG----ARGRLPSGGSHLPQPPRSLAAAS 156
Query: 68 LGLA-AQQVALDAVRQRVVRQLEAAPVHQHEQPVRLRPLHRELLRALRAQRLGLGVRPRR 126
A A+++ L R A V P RP LL LR LGV RR
Sbjct: 157 AWQAVARELGLSGPRPTEAPPFPAPRVRAPPPP--QRPAQLRLLAGLRPVVTSLGVTRRR 214
Query: 127 QR 128
R
Sbjct: 215 GR 216
>gi|239756183 PREDICTED: hypothetical protein [Homo sapiens]
Length = 229
Score = 35.0 bits (79), Expect = 0.026
Identities = 42/154 (27%), Positives = 55/154 (35%), Gaps = 18/154 (11%)
Query: 9 GRRGRECAARGGARRAPGGEGRRPGRASQEVGLPHHQAGRAPAAAATTVQGPVDKVEVAL 68
GRR C A P G R PG A G + A + G E
Sbjct: 42 GRRAGLCGASAALGTRPAGRLRPPGSA---------HPGVICSCRAPPIPGTSATPEDLA 92
Query: 69 GLAAQQVALDAVRQRVVRQLEAAPVHQHEQPVRLRPLHRELL--------RALRAQRLGL 120
G A ++ L R E +HQH +R+R LL R R +RL
Sbjct: 93 GPAFREAWLWRPCPPRPRTFERGALHQHRVDLRVRKELAHLLQGALLLQRRLQRGRRLAA 152
Query: 121 GVRPRRQRPRLLLGLQVRHADEASPVRRSGRPGP 154
++ +R + +L LQ RH P RS R P
Sbjct: 153 VLQQQRHQLAQVL-LQHRHVAPPRPAGRSRRSHP 185
>gi|239750714 PREDICTED: hypothetical protein [Homo sapiens]
Length = 229
Score = 35.0 bits (79), Expect = 0.026
Identities = 42/154 (27%), Positives = 55/154 (35%), Gaps = 18/154 (11%)
Query: 9 GRRGRECAARGGARRAPGGEGRRPGRASQEVGLPHHQAGRAPAAAATTVQGPVDKVEVAL 68
GRR C A P G R PG A G + A + G E
Sbjct: 42 GRRAGLCGASAALGTRPAGRLRPPGSA---------HPGVICSCRAPPIPGTSATPEDLA 92
Query: 69 GLAAQQVALDAVRQRVVRQLEAAPVHQHEQPVRLRPLHRELL--------RALRAQRLGL 120
G A ++ L R E +HQH +R+R LL R R +RL
Sbjct: 93 GPAFREAWLWRPCPPRPRTFERGALHQHRVDLRVRKELAHLLQGALLLQRRLQRGRRLAA 152
Query: 121 GVRPRRQRPRLLLGLQVRHADEASPVRRSGRPGP 154
++ +R + +L LQ RH P RS R P
Sbjct: 153 VLQQQRHQLAQVL-LQHRHVAPPRPAGRSRRSHP 185
>gi|239745020 PREDICTED: hypothetical protein XP_002343333 [Homo
sapiens]
Length = 229
Score = 35.0 bits (79), Expect = 0.026
Identities = 42/154 (27%), Positives = 55/154 (35%), Gaps = 18/154 (11%)
Query: 9 GRRGRECAARGGARRAPGGEGRRPGRASQEVGLPHHQAGRAPAAAATTVQGPVDKVEVAL 68
GRR C A P G R PG A G + A + G E
Sbjct: 42 GRRAGLCGASAALGTRPAGRLRPPGSA---------HPGVICSCRAPPIPGTSATPEDLA 92
Query: 69 GLAAQQVALDAVRQRVVRQLEAAPVHQHEQPVRLRPLHRELL--------RALRAQRLGL 120
G A ++ L R E +HQH +R+R LL R R +RL
Sbjct: 93 GPAFREAWLWRPCPPRPRTFERGALHQHRVDLRVRKELAHLLQGALLLQRRLQRGRRLAA 152
Query: 121 GVRPRRQRPRLLLGLQVRHADEASPVRRSGRPGP 154
++ +R + +L LQ RH P RS R P
Sbjct: 153 VLQQQRHQLAQVL-LQHRHVAPPRPAGRSRRSHP 185
>gi|239750574 PREDICTED: hypothetical protein [Homo sapiens]
Length = 1297
Score = 34.7 bits (78), Expect = 0.034
Identities = 53/149 (35%), Positives = 62/149 (41%), Gaps = 20/149 (13%)
Query: 3 HVPLLRGRRGRE---CAARGGARRAPGGEGRRPGRASQEVGLPHHQAGRAPAAAATTVQG 59
H P RGRR R A GGA A GRR G Q VG RA A A G
Sbjct: 935 HRPGARGRRSRRRAAVALAGGAHPARAALGRRRG-GGQAVG------ARA-AHQARLAGG 986
Query: 60 PVDKVEVALGLAAQQVALDAVRQRVVRQLEAAPVHQHEQPV-RLRPLHRELLRALRAQRL 118
VD+V V AA+ D VR R R+L + E+ + RL L L+ LR R+
Sbjct: 987 QVDQVVV----AARAGDADGVRGRRPRRLALTARPELEELLERLHGLQDGLVDVLRHHRV 1042
Query: 119 GLGVRPRRQRPRLLLGLQVRHADEASPVR 147
VR Q G + H DE VR
Sbjct: 1043 ---VRLHPQLAGACDG-RAAHLDEEEAVR 1067
Score = 29.6 bits (65), Expect = 1.1
Identities = 38/116 (32%), Positives = 48/116 (41%), Gaps = 21/116 (18%)
Query: 4 VPLLRGRRGRECAARGGARRAPGGEGRRPGRASQEVGLPHHQAGRAPAAAATTVQGPVDK 63
V ++ GRRGR A GG R G R+ GR + QAG A VD
Sbjct: 355 VTIVPGRRGR---AAGGQERGGRGRRRQQGRRGR------RQAGPGLAKV------DVDV 399
Query: 64 VEVALGLAAQQVALDAVRQRVVRQLEAAPVHQHEQPVRLRPLHRELLRALRAQRLG 119
+ ALGL Q V + A + Q +A H R L +E LRA A+ G
Sbjct: 400 LAGALGLRWQWVLVHAGQAGQPLQGQARGPH------RPAALAQEALRAAAARPHG 449
Score = 27.3 bits (59), Expect = 5.4
Identities = 31/82 (37%), Positives = 34/82 (41%), Gaps = 25/82 (30%)
Query: 2 AHVPL-----LRGRRG-------RECAAR--GGA-----RRAPGGEGRRPGRASQEV--- 39
AHVP L GR G REC AR GG RR GG G G Q++
Sbjct: 574 AHVPTVLGGALGGRAGLVAAPARRECPARRRGGCWPRRPRRRHGGGGGGGGPGLQDLLGG 633
Query: 40 ---GLPHHQAGRAPAAAATTVQ 58
G H APAAAA T +
Sbjct: 634 GHAGGAHGHVVVAPAAAAPTAR 655
>gi|169205732 PREDICTED: hypothetical protein [Homo sapiens]
Length = 1297
Score = 34.7 bits (78), Expect = 0.034
Identities = 53/149 (35%), Positives = 62/149 (41%), Gaps = 20/149 (13%)
Query: 3 HVPLLRGRRGRE---CAARGGARRAPGGEGRRPGRASQEVGLPHHQAGRAPAAAATTVQG 59
H P RGRR R A GGA A GRR G Q VG RA A A G
Sbjct: 935 HRPGARGRRSRRRAAVALAGGAHPARAALGRRRG-GGQAVG------ARA-AHQARLAGG 986
Query: 60 PVDKVEVALGLAAQQVALDAVRQRVVRQLEAAPVHQHEQPV-RLRPLHRELLRALRAQRL 118
VD+V V AA+ D VR R R+L + E+ + RL L L+ LR R+
Sbjct: 987 QVDQVVV----AARAGDADGVRGRRPRRLALTARPELEELLERLHGLQDGLVDVLRHHRV 1042
Query: 119 GLGVRPRRQRPRLLLGLQVRHADEASPVR 147
VR Q G + H DE VR
Sbjct: 1043 ---VRLHPQLAGACDG-RAAHLDEEEAVR 1067
Score = 29.6 bits (65), Expect = 1.1
Identities = 38/116 (32%), Positives = 48/116 (41%), Gaps = 21/116 (18%)
Query: 4 VPLLRGRRGRECAARGGARRAPGGEGRRPGRASQEVGLPHHQAGRAPAAAATTVQGPVDK 63
V ++ GRRGR A GG R G R+ GR + QAG A VD
Sbjct: 355 VTIVPGRRGR---AAGGQERGGRGRRRQQGRRGR------RQAGPGLAKV------DVDV 399
Query: 64 VEVALGLAAQQVALDAVRQRVVRQLEAAPVHQHEQPVRLRPLHRELLRALRAQRLG 119
+ ALGL Q V + A + Q +A H R L +E LRA A+ G
Sbjct: 400 LAGALGLRWQWVLVHAGQAGQPLQGQARGPH------RPAALAQEALRAAAARPHG 449
Score = 27.3 bits (59), Expect = 5.4
Identities = 31/82 (37%), Positives = 34/82 (41%), Gaps = 25/82 (30%)
Query: 2 AHVPL-----LRGRRG-------RECAAR--GGA-----RRAPGGEGRRPGRASQEV--- 39
AHVP L GR G REC AR GG RR GG G G Q++
Sbjct: 574 AHVPTVLGGALGGRAGLVAAPARRECPARRRGGCWPRRPRRRHGGGGGGGGPGLQDLLGG 633
Query: 40 ---GLPHHQAGRAPAAAATTVQ 58
G H APAAAA T +
Sbjct: 634 GHAGGAHGHVVVAPAAAAPTAR 655
>gi|239751471 PREDICTED: hypothetical protein XP_002347846 [Homo
sapiens]
Length = 870
Score = 34.3 bits (77), Expect = 0.044
Identities = 19/38 (50%), Positives = 22/38 (57%), Gaps = 2/38 (5%)
Query: 7 LRGRRGRECAARG--GARRAPGGEGRRPGRASQEVGLP 42
LRGR GR A G GA +A GG GR P R + G+P
Sbjct: 469 LRGRPGRVAGASGRRGASQARGGTGRAPARLRRGRGMP 506
>gi|47419907 T-box 3 protein isoform 2 [Homo sapiens]
Length = 743
Score = 33.9 bits (76), Expect = 0.058
Identities = 22/58 (37%), Positives = 29/58 (50%), Gaps = 5/58 (8%)
Query: 22 RRAPGGEGRRPGRASQEVGLPHHQAG-----RAPAAAATTVQGPVDKVEVALGLAAQQ 74
RR+P EG P + + LP +A + AAAA QGP+ + A GLA QQ
Sbjct: 454 RRSPVREGTAPAKVEEARALPGKEAFAPLTVQTDAAAAHLAQGPLPGLGFAPGLAGQQ 511
>gi|47419905 T-box 3 protein isoform 1 [Homo sapiens]
Length = 723
Score = 33.9 bits (76), Expect = 0.058
Identities = 22/58 (37%), Positives = 29/58 (50%), Gaps = 5/58 (8%)
Query: 22 RRAPGGEGRRPGRASQEVGLPHHQAG-----RAPAAAATTVQGPVDKVEVALGLAAQQ 74
RR+P EG P + + LP +A + AAAA QGP+ + A GLA QQ
Sbjct: 434 RRSPVREGTAPAKVEEARALPGKEAFAPLTVQTDAAAAHLAQGPLPGLGFAPGLAGQQ 491
>gi|47271406 bin3, bicoid-interacting 3 [Homo sapiens]
Length = 689
Score = 32.7 bits (73), Expect = 0.13
Identities = 21/46 (45%), Positives = 24/46 (52%), Gaps = 4/46 (8%)
Query: 16 AARGGARRAPGGEGRRPGRASQEVGLPHHQAGR-APAAAATTVQGP 60
AA G R GG R PGR + G P GR +P AAAT+ GP
Sbjct: 38 AASGELR---GGTERGPGRCAPSAGSPAAAVGRESPGAAATSSSGP 80
>gi|169161029 PREDICTED: hypothetical protein [Homo sapiens]
Length = 268
Score = 32.3 bits (72), Expect = 0.17
Identities = 25/52 (48%), Positives = 26/52 (50%), Gaps = 5/52 (9%)
Query: 7 LRGRR----GRECA-ARGGARRAPGGEGRRPGRASQEVGLPHHQAGRAPAAA 53
LR RR G CA ARG RRAPG GR PG + G APAAA
Sbjct: 97 LRRRRAKVGGWGCARARGLDRRAPGEGGRSPGGGLEPSPGARGAVGAAPAAA 148
>gi|169210192 PREDICTED: hypothetical protein [Homo sapiens]
Length = 194
Score = 31.6 bits (70), Expect = 0.29
Identities = 22/46 (47%), Positives = 24/46 (52%), Gaps = 3/46 (6%)
Query: 15 CAARGGARRAPGGEGRRPGRASQEVGLPHHQAGRAPAAAATTVQGP 60
C +R G RRA GEG RPGRA + LP QA AP T P
Sbjct: 113 CGSRLGRRRA--GEGPRPGRALPFLSLP-CQAVPAPTLTPTPPDPP 155
>gi|113425957 PREDICTED: hypothetical protein [Homo sapiens]
Length = 194
Score = 31.6 bits (70), Expect = 0.29
Identities = 22/46 (47%), Positives = 24/46 (52%), Gaps = 3/46 (6%)
Query: 15 CAARGGARRAPGGEGRRPGRASQEVGLPHHQAGRAPAAAATTVQGP 60
C +R G RRA GEG RPGRA + LP QA AP T P
Sbjct: 113 CGSRLGRRRA--GEGPRPGRALPFLSLP-CQAVPAPTLTPTPPDPP 155
>gi|239754657 PREDICTED: hypothetical protein XP_002346062 [Homo
sapiens]
Length = 384
Score = 31.2 bits (69), Expect = 0.37
Identities = 28/98 (28%), Positives = 39/98 (39%), Gaps = 11/98 (11%)
Query: 18 RGGARRAPGGEGRRPG----RASQEVGLPHHQAGRAPAAAATTVQGPVDKVEVALGLAA- 72
+ G+R P G RPG RAS P A AP AA+ GP + + + + A
Sbjct: 114 QSGSRLRPAAPGPRPGCSSARASPAPAAPQAAARTAPGRAASGGSGPGSRGQGSDQVGAR 173
Query: 73 ------QQVALDAVRQRVVRQLEAAPVHQHEQPVRLRP 104
Q L R R + A P + P++ RP
Sbjct: 174 PSRAGGQPPPLTCRRCRAAPRRSARPFRRPGLPLKSRP 211
>gi|239743279 PREDICTED: hypothetical protein XP_002342816 [Homo
sapiens]
Length = 384
Score = 31.2 bits (69), Expect = 0.37
Identities = 28/98 (28%), Positives = 39/98 (39%), Gaps = 11/98 (11%)
Query: 18 RGGARRAPGGEGRRPG----RASQEVGLPHHQAGRAPAAAATTVQGPVDKVEVALGLAA- 72
+ G+R P G RPG RAS P A AP AA+ GP + + + + A
Sbjct: 114 QSGSRLRPAAPGPRPGCSSARASPAPAAPQAAARTAPGRAASGGSGPGSRGQGSDQVGAR 173
Query: 73 ------QQVALDAVRQRVVRQLEAAPVHQHEQPVRLRP 104
Q L R R + A P + P++ RP
Sbjct: 174 PSRAGGQPPPLTCRRCRAAPRRSARPFRRPGLPLKSRP 211
>gi|239508962 PREDICTED: hypothetical protein [Homo sapiens]
Length = 384
Score = 31.2 bits (69), Expect = 0.37
Identities = 28/98 (28%), Positives = 39/98 (39%), Gaps = 11/98 (11%)
Query: 18 RGGARRAPGGEGRRPG----RASQEVGLPHHQAGRAPAAAATTVQGPVDKVEVALGLAA- 72
+ G+R P G RPG RAS P A AP AA+ GP + + + + A
Sbjct: 114 QSGSRLRPAAPGPRPGCSSARASPAPAAPQAAARTAPGRAASGGSGPGSRGQGSDQVGAR 173
Query: 73 ------QQVALDAVRQRVVRQLEAAPVHQHEQPVRLRP 104
Q L R R + A P + P++ RP
Sbjct: 174 PSRAGGQPPPLTCRRCRAAPRRSARPFRRPGLPLKSRP 211
>gi|157694497 zinc finger and BTB domain containing 10 isoform b
[Homo sapiens]
Length = 847
Score = 31.2 bits (69), Expect = 0.37
Identities = 23/61 (37%), Positives = 25/61 (40%), Gaps = 4/61 (6%)
Query: 5 PLLRGRRGRECAARGGARRAPGGEGRRPGRASQEVGLPHHQAGRAPAAAATTVQGPVDKV 64
PLL R R A RGG G G GR V H GR PA TV +D +
Sbjct: 113 PLLAERNRRTLAFRGGGGGGLGNNGSSRGRPETSVWPLRHFNGRGPA----TVDLELDAL 168
Query: 65 E 65
E
Sbjct: 169 E 169
>gi|157694499 zinc finger and BTB domain containing 10 isoform a
[Homo sapiens]
Length = 871
Score = 31.2 bits (69), Expect = 0.37
Identities = 23/61 (37%), Positives = 25/61 (40%), Gaps = 4/61 (6%)
Query: 5 PLLRGRRGRECAARGGARRAPGGEGRRPGRASQEVGLPHHQAGRAPAAAATTVQGPVDKV 64
PLL R R A RGG G G GR V H GR PA TV +D +
Sbjct: 113 PLLAERNRRTLAFRGGGGGGLGNNGSSRGRPETSVWPLRHFNGRGPA----TVDLELDAL 168
Query: 65 E 65
E
Sbjct: 169 E 169
>gi|134142824 forkhead box D2 [Homo sapiens]
Length = 495
Score = 30.8 bits (68), Expect = 0.49
Identities = 23/76 (30%), Positives = 32/76 (42%), Gaps = 1/76 (1%)
Query: 2 AHVPLLRGRRGRECAARGGARRAPGGEGRRPGRASQEVGLPHHQAGRAPAAAATTVQGPV 61
A +P R+G + A GGA G G+RP + + + H G AP A GP
Sbjct: 380 AGLPTALLRQGLKTDAGGGAGGGGAGAGQRPSFSIDHI-MGHGGGGAAPPGAGEGSPGPP 438
Query: 62 DKVEVALGLAAQQVAL 77
G AQ +A+
Sbjct: 439 FAAAAGPGGQAQVLAM 454
>gi|239755255 PREDICTED: hypothetical protein [Homo sapiens]
Length = 297
Score = 30.0 bits (66), Expect = 0.83
Identities = 31/108 (28%), Positives = 41/108 (37%), Gaps = 17/108 (15%)
Query: 8 RGRRGRECAARGGARRAPGGEG----RRPGRASQEVGLPHHQAGRAP------AAAATTV 57
RG R E A GG PGG G R PGR P +A +AAA+
Sbjct: 195 RGARAAEHPAVGGRGHGPGGHGCGGWRWPGRRRWRGLAPGEEANEGAVGVGGGSAAASLA 254
Query: 58 QGPVDKVEVALGLAAQQVALDAVRQRVVRQLEAAPVHQHEQPVRLRPL 105
+GP + L A V + + +RV P H H +P+
Sbjct: 255 RGPRSESGRGLDPAEGAVFITPLGKRV-------PSHCHPSRGARQPI 295
>gi|239754489 PREDICTED: hypothetical protein [Homo sapiens]
Length = 228
Score = 30.0 bits (66), Expect = 0.83
Identities = 27/69 (39%), Positives = 30/69 (43%), Gaps = 6/69 (8%)
Query: 10 RRGRECAARGGARRAPGGEGRRPG--RASQEVGLPHHQAGRAPAAAATTVQGPVDKV-EV 66
RR R RGG G R+PG RA E LP H RAP A V V V
Sbjct: 125 RRRRLQRRRGGRGGRGAGRARKPGPDRAGAERSLPAH---RAPRLARPPVPPSVAHVARA 181
Query: 67 ALGLAAQQV 75
+ GL A+ V
Sbjct: 182 SAGLGARPV 190
>gi|239754110 PREDICTED: hypothetical protein XP_002345881 [Homo
sapiens]
Length = 284
Score = 30.0 bits (66), Expect = 0.83
Identities = 32/101 (31%), Positives = 42/101 (41%), Gaps = 18/101 (17%)
Query: 8 RGRRGRECAARGGARRAPGG-EGRRPGRASQEVGLPHHQAGRAPAAAATTVQG------- 59
RG GR A GG GG G R GR E G P QA R +A ++G
Sbjct: 165 RGGSGRSSAGGGGGGGGGGGGRGSRRGRGGGERGGPRAQAVRRRLSA---LRGRGRRRRL 221
Query: 60 -PVDKVEVALGLAAQQVALDAVRQRVVRQLEAAPVHQHEQP 99
+ + + G AA + A +VR+ E PV Q +P
Sbjct: 222 KRLRRAQETSGAAALERACASVRE------ELLPVLQFSEP 256
>gi|239749748 PREDICTED: hypothetical protein XP_002347156 [Homo
sapiens]
Length = 446
Score = 30.0 bits (66), Expect = 0.83
Identities = 31/108 (28%), Positives = 41/108 (37%), Gaps = 17/108 (15%)
Query: 8 RGRRGRECAARGGARRAPGGEG----RRPGRASQEVGLPHHQAGRAP------AAAATTV 57
RG R E A GG PGG G R PGR P +A +AAA+
Sbjct: 344 RGARAAEHPAVGGRGHGPGGHGCGGWRWPGRRRWRGLAPGEEANEGAVGVGGGSAAASLA 403
Query: 58 QGPVDKVEVALGLAAQQVALDAVRQRVVRQLEAAPVHQHEQPVRLRPL 105
+GP + L A V + + +RV P H H +P+
Sbjct: 404 RGPRSESGRGLDPAEGAVFITPLGKRV-------PSHCHPSRGARQPI 444
>gi|239744003 PREDICTED: hypothetical protein XP_002343004 [Homo
sapiens]
Length = 446
Score = 30.0 bits (66), Expect = 0.83
Identities = 31/108 (28%), Positives = 41/108 (37%), Gaps = 17/108 (15%)
Query: 8 RGRRGRECAARGGARRAPGGEG----RRPGRASQEVGLPHHQAGRAP------AAAATTV 57
RG R E A GG PGG G R PGR P +A +AAA+
Sbjct: 344 RGARAAEHPAVGGRGHGPGGHGCGGWRWPGRRRWRGLAPGEEANEGAVGVGGGSAAASLA 403
Query: 58 QGPVDKVEVALGLAAQQVALDAVRQRVVRQLEAAPVHQHEQPVRLRPL 105
+GP + L A V + + +RV P H H +P+
Sbjct: 404 RGPRSESGRGLDPAEGAVFITPLGKRV-------PSHCHPSRGARQPI 444
>gi|239743069 PREDICTED: hypothetical protein XP_002342750 [Homo
sapiens]
Length = 231
Score = 30.0 bits (66), Expect = 0.83
Identities = 27/69 (39%), Positives = 30/69 (43%), Gaps = 6/69 (8%)
Query: 10 RRGRECAARGGARRAPGGEGRRPG--RASQEVGLPHHQAGRAPAAAATTVQGPVDKV-EV 66
RR R RGG G R+PG RA E LP H RAP A V V V
Sbjct: 128 RRRRLQRRRGGRGGRGAGRARKPGPDRAGAERSLPAH---RAPRLARPPVPPSVAHVARA 184
Query: 67 ALGLAAQQV 75
+ GL A+ V
Sbjct: 185 SAGLGARPV 193
>gi|239508715 PREDICTED: hypothetical protein [Homo sapiens]
Length = 231
Score = 30.0 bits (66), Expect = 0.83
Identities = 27/69 (39%), Positives = 30/69 (43%), Gaps = 6/69 (8%)
Query: 10 RRGRECAARGGARRAPGGEGRRPG--RASQEVGLPHHQAGRAPAAAATTVQGPVDKV-EV 66
RR R RGG G R+PG RA E LP H RAP A V V V
Sbjct: 128 RRRRLQRRRGGRGGRGAGRARKPGPDRAGAERSLPAH---RAPRLARPPVPPSVAHVARA 184
Query: 67 ALGLAAQQV 75
+ GL A+ V
Sbjct: 185 SAGLGARPV 193
>gi|51317366 myosin XVIIIB [Homo sapiens]
Length = 2567
Score = 30.0 bits (66), Expect = 0.83
Identities = 21/74 (28%), Positives = 31/74 (41%), Gaps = 10/74 (13%)
Query: 24 APGGEGRRPGRASQEVGLPHHQAGRAPAAAATTVQGPVDKVEVALGLAAQQVALDAVRQR 83
A G+G PG QE P +AG A T ++GP + + DA R R
Sbjct: 430 AAPGKGGWPGSRGQEAEEPCSRAGDGAGALETELEGP----------SQPALEKDAERPR 479
Query: 84 VVRQLEAAPVHQHE 97
+ ++ + P Q E
Sbjct: 480 IRKENQDGPAPQEE 493
Database: hs.faa
Posted date: Aug 4, 2009 4:42 PM
Number of letters in database: 18,247,518
Number of sequences in database: 37,866
Lambda K H
0.322 0.137 0.411
Gapped
Lambda K H
0.267 0.0410 0.140
Matrix: BLOSUM62
Gap Penalties: Existence: 11, Extension: 1
Number of Hits to DB: 6,649,434
Number of Sequences: 37866
Number of extensions: 318872
Number of successful extensions: 1916
Number of sequences better than 10.0: 30
Number of HSP's better than 10.0 without gapping: 36
Number of HSP's successfully gapped in prelim test: 106
Number of HSP's that attempted gapping in prelim test: 1818
Number of HSP's gapped (non-prelim): 194
length of query: 155
length of database: 18,247,518
effective HSP length: 93
effective length of query: 62
effective length of database: 14,725,980
effective search space: 913010760
effective search space used: 913010760
T: 11
A: 40
X1: 16 ( 7.4 bits)
X2: 38 (14.6 bits)
X3: 64 (24.7 bits)
S1: 41 (21.9 bits)
S2: 57 (26.6 bits)
Search results were obtained with NCBI BLAST and RefSeq entries.
Home |
Table of Contents |
Search text |
Search genes |
Search sequences |
Purchase |
FAQ |
Blog |
Help
Guide to the Human Genome
Copyright © 2010 by Stewart Scherer. All rights reserved.