| Name: LOC643166 | Sequence: fasta or formatted (154aa) | NCBI GI: 239750312 | |
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Description: PREDICTED: similar to hCG1744891
| Not currently referenced in the text | ||
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Composition:
Amino acid Percentage Count Longest homopolymer A alanine 3.2 5 1 C cysteine 2.6 4 1 D aspartate 6.5 10 2 E glutamate 15.6 24 3 F phenylalanine 2.6 4 1 G glycine 0.6 1 1 H histidine 1.9 3 1 I isoleucine 6.5 10 2 K lysine 12.3 19 2 L leucine 11.7 18 2 M methionine 5.2 8 1 N asparagine 5.8 9 2 P proline 1.9 3 1 Q glutamine 7.1 11 2 R arginine 1.9 3 1 S serine 3.9 6 2 T threonine 3.9 6 1 V valine 5.8 9 1 W tryptophan 0.0 0 0 Y tyrosine 0.6 1 1 |
Comparative genomics:
Search single species RefSeq proteins at NCBI
Search summary 
Figure data | ||
Related human proteins:Protein Relative score Description Self-match 1.000 PREDICTED: similar to hCG1744891 LOC728897 0.935 PREDICTED: similar to coiled-coil domain containing... LOC728897 0.871 PREDICTED: similar to coiled-coil domain containing... CCDC29 0.828 coiled-coil domain containing 29 LOC100289454 0.824 PREDICTED: hypothetical protein XP_002342954 LOC100287836 0.774 PREDICTED: hypothetical protein XP_002344496 ANKRD18B 0.703 PREDICTED: ankyrin repeat domain 18B ANKRD18B 0.703 PREDICTED: ankyrin repeat domain 18B ANKRD18B 0.703 PREDICTED: ankyrin repeat domain 18B ANKRD18A 0.695 PREDICTED: ankyrin repeat domain 18A ANKRD18A 0.695 PREDICTED: ankyrin repeat domain 18A ANKRD18A 0.695 PREDICTED: ankyrin repeat domain 18A LOC728384 0.581 PREDICTED: similar to coiled-coil domain containing... LOC100132733 0.513 PREDICTED: similar to FLJ00310 protein ANKRD26 0.437 ankyrin repeat domain 26 LOC100131673 0.280 PREDICTED: hypothetical protein LOC100131673 0.280 PREDICTED: hypothetical protein CCDC144A 0.208 coiled-coil domain containing 144A MYH4 0.079 myosin, heavy polypeptide 4, skeletal muscle CCDC88A 0.079 coiled-coil domain containing 88A isoform 2 CCDC88A 0.079 coiled-coil domain containing 88A isoform 1 MYH8 0.075 myosin, heavy chain 8, skeletal muscle, perinatal [... CALCOCO2 0.075 calcium binding and coiled-coil domain 2 RB1CC1 0.072 Rb1-inducible coiled coil protein 1 isoform 2 [Homo... RB1CC1 0.072 Rb1-inducible coiled coil protein 1 isoform 1 [Homo... CEP135 0.072 centrosome protein 4 CCDC18 0.072 sarcoma antigen NY-SAR-41 MYH3 0.065 myosin, heavy chain 3, skeletal muscle, embryonic [H... MYH1 0.065 myosin, heavy chain 1, skeletal muscle, adult [Homo... MYH13 0.061 myosin, heavy polypeptide 13, skeletal muscle [Homo...Human BLASTP results (used to prepare the table) | |||
Gene descriptions are from NCBI RefSeq. Search results were obtained with NCBI BLAST and RefSeq entries. When identical proteins are present, the self-match may not be listed first in BLASTP output. In such cases, the table above has been reordered to place it first.
See About the Figures for the scoring system used in the figure above right. The same scoring system was used in the table of BLASTP results.
Guide to the Human Genome
Copyright © 2010 by Stewart Scherer. All rights reserved.
