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Search of human proteins with 239750077
BLASTP 2.2.11 [Jun-05-2005]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= gi|239750077 PREDICTED: hypothetical protein [Homo sapiens]
(903 letters)
Database: hs.faa
37,866 sequences; 18,247,518 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
gi|239750077 PREDICTED: hypothetical protein [Homo sapiens] 1824 0.0
gi|239757130 PREDICTED: hypothetical protein FLJ22184 [Homo sapi... 38 0.037
gi|239751637 PREDICTED: hypothetical protein FLJ22184 [Homo sapi... 38 0.037
gi|239746149 PREDICTED: hypothetical protein LOC80164 [Homo sapi... 38 0.037
gi|140161498 hypothetical protein LOC23281 isoform a [Homo sapiens] 38 0.049
gi|21359935 Down syndrome cell adhesion molecule like 1 [Homo sa... 36 0.14
gi|239758021 PREDICTED: hypothetical protein [Homo sapiens] 36 0.18
gi|239741335 PREDICTED: hypothetical protein XP_002342177 [Homo ... 36 0.18
gi|239753500 PREDICTED: hypothetical protein [Homo sapiens] 35 0.32
gi|239748051 PREDICTED: hypothetical protein XP_002346521 [Homo ... 35 0.32
gi|239741944 PREDICTED: hypothetical protein XP_002342359 [Homo ... 35 0.32
gi|11641239 hypothetical protein LOC53838 [Homo sapiens] 34 0.54
gi|224458284 Rho GTPase activating protein 23 [Homo sapiens] 33 0.92
gi|239742065 PREDICTED: hypothetical protein XP_002342402 [Homo ... 33 0.92
gi|23510333 pygopus homolog 2 [Homo sapiens] 33 0.92
gi|4501989 alpha-fetoprotein precursor [Homo sapiens] 33 1.2
gi|239750109 PREDICTED: similar to unc-93 homolog B1 (C. elegans... 33 1.2
gi|239744415 PREDICTED: similar to unc-93 homolog B1 (C. elegans... 33 1.2
gi|7656967 cadherin EGF LAG seven-pass G-type receptor 1 [Homo s... 33 1.2
gi|63175652 CREBBP/EP300 inhibitor 2 [Homo sapiens] 33 1.2
gi|33667117 MICAL-like 2 isoform 1 [Homo sapiens] 33 1.2
gi|10190682 chromobox homolog 8 [Homo sapiens] 33 1.2
gi|111185957 downstream of tyrosine kinase 7 [Homo sapiens] 33 1.6
gi|239757360 PREDICTED: hypothetical protein [Homo sapiens] 33 1.6
gi|239752594 PREDICTED: hypothetical protein, partial [Homo sapi... 33 1.6
gi|194097354 G1 to S phase transition 1 isoform 2 [Homo sapiens] 33 1.6
gi|194018520 G1 to S phase transition 1 isoform 1 [Homo sapiens] 33 1.6
gi|32307126 nuclear receptor coactivator 3 isoform a [Homo sapiens] 32 2.0
gi|32307124 nuclear receptor coactivator 3 isoform b [Homo sapiens] 32 2.0
gi|119395758 diaphanous 1 isoform 1 [Homo sapiens] 32 2.0
>gi|239750077 PREDICTED: hypothetical protein [Homo sapiens]
Length = 903
Score = 1824 bits (4725), Expect = 0.0
Identities = 903/903 (100%), Positives = 903/903 (100%)
Query: 1 MLGVWVISGHRKRGREGFLKQRPEPQKRENRESLGETKVMGMGEQEQRLGGRGHKQKATE 60
MLGVWVISGHRKRGREGFLKQRPEPQKRENRESLGETKVMGMGEQEQRLGGRGHKQKATE
Sbjct: 1 MLGVWVISGHRKRGREGFLKQRPEPQKRENRESLGETKVMGMGEQEQRLGGRGHKQKATE 60
Query: 61 AQQTRQAPALALWPPRSASSELRVLLLALRVSARQVPAAPGCVTVAGTGHQRPVPQPLRH 120
AQQTRQAPALALWPPRSASSELRVLLLALRVSARQVPAAPGCVTVAGTGHQRPVPQPLRH
Sbjct: 61 AQQTRQAPALALWPPRSASSELRVLLLALRVSARQVPAAPGCVTVAGTGHQRPVPQPLRH 120
Query: 121 LAQQAPADLLGEPCPLLLTLLGQLGQQLWEKDGHHRRGLAALHPVCPPVRPWPHLGLLFC 180
LAQQAPADLLGEPCPLLLTLLGQLGQQLWEKDGHHRRGLAALHPVCPPVRPWPHLGLLFC
Sbjct: 121 LAQQAPADLLGEPCPLLLTLLGQLGQQLWEKDGHHRRGLAALHPVCPPVRPWPHLGLLFC 180
Query: 181 QLLQDLLLPSHKTVMPLLLGLLQLQGSLHGSNAGWLGAQTPALPPQYPDGPRSRCPYASF 240
QLLQDLLLPSHKTVMPLLLGLLQLQGSLHGSNAGWLGAQTPALPPQYPDGPRSRCPYASF
Sbjct: 181 QLLQDLLLPSHKTVMPLLLGLLQLQGSLHGSNAGWLGAQTPALPPQYPDGPRSRCPYASF 240
Query: 241 LCLSLILASEMLLWRFLSRIFCSSFFSLEKPAGEEEGSAAEAQTLPSFCLCLSQAIQQAA 300
LCLSLILASEMLLWRFLSRIFCSSFFSLEKPAGEEEGSAAEAQTLPSFCLCLSQAIQQAA
Sbjct: 241 LCLSLILASEMLLWRFLSRIFCSSFFSLEKPAGEEEGSAAEAQTLPSFCLCLSQAIQQAA 300
Query: 301 GEGDCLPLMLLAQLPQVSLLPAPELDQSLVTSELIQRGGGHLWERQSKASVASHCPDEVA 360
GEGDCLPLMLLAQLPQVSLLPAPELDQSLVTSELIQRGGGHLWERQSKASVASHCPDEVA
Sbjct: 301 GEGDCLPLMLLAQLPQVSLLPAPELDQSLVTSELIQRGGGHLWERQSKASVASHCPDEVA 360
Query: 361 ETPVPPLQAYMELEEFQPSEPEPCPAPAHLTLPNEGGQLPGPLVHQADVLNGVDQGLRIA 420
ETPVPPLQAYMELEEFQPSEPEPCPAPAHLTLPNEGGQLPGPLVHQADVLNGVDQGLRIA
Sbjct: 361 ETPVPPLQAYMELEEFQPSEPEPCPAPAHLTLPNEGGQLPGPLVHQADVLNGVDQGLRIA 420
Query: 421 GPAHPQLTLVVVRNVVRGFGVDEQGRQAQRLVGLVPQADVVALATMPSTMTSVKGSKDLS 480
GPAHPQLTLVVVRNVVRGFGVDEQGRQAQRLVGLVPQADVVALATMPSTMTSVKGSKDLS
Sbjct: 421 GPAHPQLTLVVVRNVVRGFGVDEQGRQAQRLVGLVPQADVVALATMPSTMTSVKGSKDLS 480
Query: 481 GRRMNSGLSRYPLRPLYSKTPALSCIATSGGLEVERNKLAPYVPEELGHVVGGVHAGALG 540
GRRMNSGLSRYPLRPLYSKTPALSCIATSGGLEVERNKLAPYVPEELGHVVGGVHAGALG
Sbjct: 481 GRRMNSGLSRYPLRPLYSKTPALSCIATSGGLEVERNKLAPYVPEELGHVVGGVHAGALG 540
Query: 541 VDAAELLLVDTPQTPWGSWSRYSHLTLPSVMRGVDEVGTQWLGHVRAQIQGFQGQDAILL 600
VDAAELLLVDTPQTPWGSWSRYSHLTLPSVMRGVDEVGTQWLGHVRAQIQGFQGQDAILL
Sbjct: 541 VDAAELLLVDTPQTPWGSWSRYSHLTLPSVMRGVDEVGTQWLGHVRAQIQGFQGQDAILL 600
Query: 601 ASQKLLVGLILFDEQPGLGGPQGRVQHFVESRVALLLVDEVHELLQRQRHAKQKLNTEHR 660
ASQKLLVGLILFDEQPGLGGPQGRVQHFVESRVALLLVDEVHELLQRQRHAKQKLNTEHR
Sbjct: 601 ASQKLLVGLILFDEQPGLGGPQGRVQHFVESRVALLLVDEVHELLQRQRHAKQKLNTEHR 660
Query: 661 GCEAGRAHSHLQQDLVNVRPQTQLVQEPLKDFQGKLIRPDGLTLEVEECGDSSAVSTRFL 720
GCEAGRAHSHLQQDLVNVRPQTQLVQEPLKDFQGKLIRPDGLTLEVEECGDSSAVSTRFL
Sbjct: 661 GCEAGRAHSHLQQDLVNVRPQTQLVQEPLKDFQGKLIRPDGLTLEVEECGDSSAVSTRFL 720
Query: 721 SAENIFRMLMRAGGVQGQWRTKVTKPTLAVSSCTAMKFKNTVFTGSGPDTTVISFSSSRA 780
SAENIFRMLMRAGGVQGQWRTKVTKPTLAVSSCTAMKFKNTVFTGSGPDTTVISFSSSRA
Sbjct: 721 SAENIFRMLMRAGGVQGQWRTKVTKPTLAVSSCTAMKFKNTVFTGSGPDTTVISFSSSRA 780
Query: 781 SGPPKPRTSRILGFPLCAHSGREAQRTPQTTLRFPAWPQGGGGAAPGADSVSHKPEPRAI 840
SGPPKPRTSRILGFPLCAHSGREAQRTPQTTLRFPAWPQGGGGAAPGADSVSHKPEPRAI
Sbjct: 781 SGPPKPRTSRILGFPLCAHSGREAQRTPQTTLRFPAWPQGGGGAAPGADSVSHKPEPRAI 840
Query: 841 LPEPSPRVGPCGGARSLLAGRGLEDLDIGDRSVSSPDSLSAHDVHSPAFSDSPYSQMASM 900
LPEPSPRVGPCGGARSLLAGRGLEDLDIGDRSVSSPDSLSAHDVHSPAFSDSPYSQMASM
Sbjct: 841 LPEPSPRVGPCGGARSLLAGRGLEDLDIGDRSVSSPDSLSAHDVHSPAFSDSPYSQMASM 900
Query: 901 RTE 903
RTE
Sbjct: 901 RTE 903
>gi|239757130 PREDICTED: hypothetical protein FLJ22184 [Homo
sapiens]
Length = 855
Score = 38.1 bits (87), Expect = 0.037
Identities = 28/86 (32%), Positives = 40/86 (46%), Gaps = 7/86 (8%)
Query: 767 GPDTTVIS--FSSSRASGPPKPRT----SRILGFPLCAHSGREAQRTPQTTLRFPAWPQG 820
GPDT+V + + A GPP P + S + G L HS A TP+ + + P+G
Sbjct: 593 GPDTSVSGPRLTLALAPGPPPPPSRSPSSTLSGPDLAGHSS-SATSTPEELRGYDSGPEG 651
Query: 821 GGGAAPGADSVSHKPEPRAILPEPSP 846
G A+P D+ P A P+P
Sbjct: 652 GAAASPPPDAELAACHPAAWSRGPAP 677
>gi|239751637 PREDICTED: hypothetical protein FLJ22184 [Homo
sapiens]
Length = 1124
Score = 38.1 bits (87), Expect = 0.037
Identities = 28/86 (32%), Positives = 40/86 (46%), Gaps = 7/86 (8%)
Query: 767 GPDTTVIS--FSSSRASGPPKPRT----SRILGFPLCAHSGREAQRTPQTTLRFPAWPQG 820
GPDT+V + + A GPP P + S + G L HS A TP+ + + P+G
Sbjct: 862 GPDTSVSGPRLTLALAPGPPPPPSRSPSSTLSGPDLAGHSS-SATSTPEELRGYDSGPEG 920
Query: 821 GGGAAPGADSVSHKPEPRAILPEPSP 846
G A+P D+ P A P+P
Sbjct: 921 GAAASPPPDAELAACHPAAWSRGPAP 946
>gi|239746149 PREDICTED: hypothetical protein LOC80164 [Homo
sapiens]
Length = 816
Score = 38.1 bits (87), Expect = 0.037
Identities = 28/86 (32%), Positives = 40/86 (46%), Gaps = 7/86 (8%)
Query: 767 GPDTTVIS--FSSSRASGPPKPRT----SRILGFPLCAHSGREAQRTPQTTLRFPAWPQG 820
GPDT+V + + A GPP P + S + G L HS A TP+ + + P+G
Sbjct: 554 GPDTSVSGPRLTLALAPGPPPPPSRSPSSTLSGPDLAGHSS-SATSTPEELRGYDSGPEG 612
Query: 821 GGGAAPGADSVSHKPEPRAILPEPSP 846
G A+P D+ P A P+P
Sbjct: 613 GAAASPPPDAELAACHPAAWSRGPAP 638
>gi|140161498 hypothetical protein LOC23281 isoform a [Homo sapiens]
Length = 1379
Score = 37.7 bits (86), Expect = 0.049
Identities = 35/123 (28%), Positives = 54/123 (43%), Gaps = 13/123 (10%)
Query: 770 TTVISFSSSRASGPPKPRTSRILGFPLCAHS-GREAQRTPQTTLRFPAWPQGGGGAAPGA 828
++V S SS+++ +P R P + G E Q + +L P+G G AP A
Sbjct: 868 SSVSSVSSTQSGDSAQPEQGR----PATRSTFGNEEQPVLKASLPSKDTPKGAGRVAPPA 923
Query: 829 DSVSHKPEPRAILPEPSPRVGPCGGARSLLAGRGLEDLDIGDRSVSSPDSLSAH--DVHS 886
S P R++LP P P G + +D D +VSSP ++A +HS
Sbjct: 924 SSSVTAPR-RSLLPAPKSTSTPAGTKKD-----AQKDQDTNKPAVSSPKRVAASTTKLHS 977
Query: 887 PAF 889
P +
Sbjct: 978 PGY 980
>gi|21359935 Down syndrome cell adhesion molecule like 1 [Homo
sapiens]
Length = 2113
Score = 36.2 bits (82), Expect = 0.14
Identities = 26/76 (34%), Positives = 30/76 (39%), Gaps = 7/76 (9%)
Query: 789 SRILGFPLCAHSGREAQRT----PQTTLRFPAWPQGGGGAAPGADSVSHKPEPRAILPEP 844
S+ LG P H G A + PQ TL PA P G APG P A P P
Sbjct: 2010 SKSLGLP---HPGAPAAASTATLPQRTLAMPAPPAGTAPPAPGPTPAEPPTAPSAAPPAP 2066
Query: 845 SPRVGPCGGARSLLAG 860
S GG + + G
Sbjct: 2067 STEPPRAGGPHTKMGG 2082
>gi|239758021 PREDICTED: hypothetical protein [Homo sapiens]
Length = 195
Score = 35.8 bits (81), Expect = 0.18
Identities = 49/148 (33%), Positives = 57/148 (38%), Gaps = 30/148 (20%)
Query: 287 SFCLCLSQAIQQAAGEGDCLPLMLLAQLPQVSLLPAPELDQS----LVTSELIQRGGGHL 342
SFC LS ++ G G PL Q P+ LLP P+ + L SEL L
Sbjct: 24 SFCWNLSAIQAESEGRGSQGPLQ--QQPPECWLLPPPQQLEPPEGWLQQSELWGLRRWDL 81
Query: 343 WE----RQSKASVASHCPDEVAETPVPPLQAYMELEEFQPSEPEPCPAPAHLTLPNE--G 396
W RQ + P P LQ ELE P E EP P LTL E G
Sbjct: 82 WRLWWLRQ--------------QPPPPELQQPPELEPQPPPELEP-QQPPELTLQQEETG 126
Query: 397 GQLPGPLVHQADVLNGVDQGLRIAGPAH 424
G L G H GV G+ + G H
Sbjct: 127 GHLGG---HLGAGHLGVHLGVHLGGGWH 151
>gi|239741335 PREDICTED: hypothetical protein XP_002342177 [Homo
sapiens]
Length = 214
Score = 35.8 bits (81), Expect = 0.18
Identities = 49/148 (33%), Positives = 57/148 (38%), Gaps = 30/148 (20%)
Query: 287 SFCLCLSQAIQQAAGEGDCLPLMLLAQLPQVSLLPAPELDQS----LVTSELIQRGGGHL 342
SFC LS ++ G G PL Q P+ LLP P+ + L SEL L
Sbjct: 24 SFCWNLSAIQAESEGRGSQGPLQ--QQPPECWLLPPPQQLEPPEGWLQQSELWGLRRWDL 81
Query: 343 WE----RQSKASVASHCPDEVAETPVPPLQAYMELEEFQPSEPEPCPAPAHLTLPNE--G 396
W RQ + P P LQ ELE P E EP P LTL E G
Sbjct: 82 WRLWWLRQ--------------QPPPPELQQPPELEPQPPPELEP-QQPPELTLQQEETG 126
Query: 397 GQLPGPLVHQADVLNGVDQGLRIAGPAH 424
G L G H GV G+ + G H
Sbjct: 127 GHLGG---HLGAGHLGVHLGVHLGGGWH 151
>gi|239753500 PREDICTED: hypothetical protein [Homo sapiens]
Length = 213
Score = 35.0 bits (79), Expect = 0.32
Identities = 27/74 (36%), Positives = 32/74 (43%), Gaps = 13/74 (17%)
Query: 780 ASGPPKPRTSRILGFPLCAHSGREAQRTPQTTLRFPAWPQGGGGAAPG-ADSVSHKPEPR 838
A+ P RT FP A +GRE A P G G+ PG A S P PR
Sbjct: 36 AAKEPAARTPARQVFPAAASAGREGS----------AAPDGARGSTPGLAASRELSPPPR 85
Query: 839 A--ILPEPSPRVGP 850
A +P P PR+ P
Sbjct: 86 APRTVPAPHPRLSP 99
>gi|239748051 PREDICTED: hypothetical protein XP_002346521 [Homo
sapiens]
Length = 213
Score = 35.0 bits (79), Expect = 0.32
Identities = 27/74 (36%), Positives = 32/74 (43%), Gaps = 13/74 (17%)
Query: 780 ASGPPKPRTSRILGFPLCAHSGREAQRTPQTTLRFPAWPQGGGGAAPG-ADSVSHKPEPR 838
A+ P RT FP A +GRE A P G G+ PG A S P PR
Sbjct: 36 AAKEPAARTPARQVFPAAASAGREGS----------AAPDGARGSTPGLAASRELSPPPR 85
Query: 839 A--ILPEPSPRVGP 850
A +P P PR+ P
Sbjct: 86 APRTVPAPHPRLSP 99
>gi|239741944 PREDICTED: hypothetical protein XP_002342359 [Homo
sapiens]
Length = 213
Score = 35.0 bits (79), Expect = 0.32
Identities = 27/74 (36%), Positives = 32/74 (43%), Gaps = 13/74 (17%)
Query: 780 ASGPPKPRTSRILGFPLCAHSGREAQRTPQTTLRFPAWPQGGGGAAPG-ADSVSHKPEPR 838
A+ P RT FP A +GRE A P G G+ PG A S P PR
Sbjct: 36 AAKEPAARTPARQVFPAAASAGREGS----------AAPDGARGSTPGLAASRELSPPPR 85
Query: 839 A--ILPEPSPRVGP 850
A +P P PR+ P
Sbjct: 86 APRTVPAPHPRLSP 99
>gi|11641239 hypothetical protein LOC53838 [Homo sapiens]
Length = 449
Score = 34.3 bits (77), Expect = 0.54
Identities = 23/93 (24%), Positives = 40/93 (43%), Gaps = 1/93 (1%)
Query: 311 LAQLPQVSLLPAPELDQSLVT-SELIQRGGGHLWERQSKASVASHCPDEVAETPVPPLQA 369
LAQ+P+ S LP +L T ++ + ++ S + H P + A +PVPP++
Sbjct: 192 LAQVPKSSALPRTATLATLATRAQTVATTANTSSPMSTRPSPSKHMPSDTAASPVPPMRP 251
Query: 370 YMELEEFQPSEPEPCPAPAHLTLPNEGGQLPGP 402
+ Q S +P + + P P P
Sbjct: 252 QAQGPISQVSVDQPVVNTTNKSTPMPSNTTPEP 284
>gi|224458284 Rho GTPase activating protein 23 [Homo sapiens]
Length = 1397
Score = 33.5 bits (75), Expect = 0.92
Identities = 33/128 (25%), Positives = 47/128 (36%), Gaps = 21/128 (16%)
Query: 767 GPDTTVISFSSSRASGPPK--PRTSRILGFPLCAHSGREAQRTPQTT---------LRFP 815
G D+T S + S+ S PK P +L + R+ ++ +
Sbjct: 1043 GSDSTTCSSAKSKGSWAPKKEPYAREMLAISFISAVNRKRKKRREARGLGSSTDDDSEQE 1102
Query: 816 AWPQGGGGAAPGADSVSHKPEPRAILPE--------PSPRVGPCGGARSLLAGRGLEDLD 867
A G G APG P P A+ PE +P P RS+++ G L
Sbjct: 1103 AHKPGAGATAPGTQERPQGPLPGAVAPEAPGRLSPPAAPEERPAADTRSIVS--GYSTLS 1160
Query: 868 IGDRSVSS 875
DRSV S
Sbjct: 1161 TMDRSVCS 1168
>gi|239742065 PREDICTED: hypothetical protein XP_002342402 [Homo
sapiens]
Length = 381
Score = 33.5 bits (75), Expect = 0.92
Identities = 18/48 (37%), Positives = 24/48 (50%)
Query: 93 ARQVPAAPGCVTVAGTGHQRPVPQPLRHLAQQAPADLLGEPCPLLLTL 140
A VP APG + G Q P+ +Q APA+ + +P P L TL
Sbjct: 330 ASHVPCAPGALPQGAFGSQGARAVPVLQPSQAAPAEGISQPAPALGTL 377
>gi|23510333 pygopus homolog 2 [Homo sapiens]
Length = 406
Score = 33.5 bits (75), Expect = 0.92
Identities = 31/94 (32%), Positives = 36/94 (38%), Gaps = 8/94 (8%)
Query: 767 GPDTTVISFSSSRASGPPKPRTSRILGFPLCAHSGREAQRTPQTTLRFPAWPQGGGGAAP 826
GPD P P S FP HSG A FP G GG P
Sbjct: 246 GPDPGFPGPGGEDGGKPLNPPAST--AFPQEPHSGSPAAAVNGNQPSFPPNSSGRGGGTP 303
Query: 827 GADSVSHKPEPRA---ILPEPSP-RVGPCGGARS 856
A+S++ P +A P+P P V PCG RS
Sbjct: 304 DANSLA--PPGKAGGGSGPQPPPGLVYPCGACRS 335
>gi|4501989 alpha-fetoprotein precursor [Homo sapiens]
Length = 609
Score = 33.1 bits (74), Expect = 1.2
Identities = 16/54 (29%), Positives = 29/54 (53%), Gaps = 2/54 (3%)
Query: 254 WRFLSRIFCSSFFSLEKPAGEEEGSAAEAQTLPSFC--LCLSQAIQQAAGEGDC 305
++ +S++ + ++EKP G+E+ S LP+F LC + I + G DC
Sbjct: 60 YKEVSKMVKDALTAIEKPTGDEQSSGCLENQLPAFLEELCHEKEILEKYGHSDC 113
>gi|239750109 PREDICTED: similar to unc-93 homolog B1 (C. elegans)
[Homo sapiens]
Length = 529
Score = 33.1 bits (74), Expect = 1.2
Identities = 36/131 (27%), Positives = 44/131 (33%), Gaps = 24/131 (18%)
Query: 740 RTKVTKPTLAV---SSCTAMKFKNTVFTGSGPDTTVISFSSSRASGPP-------KPRTS 789
R T+P+ SSC + G GP V + +S GPP K
Sbjct: 243 RALSTRPSAGAGSGSSCDPAPLQILPAVGRGPGPRVTALCTSYPQGPPRATIFLQKMSNK 302
Query: 790 RILGFPLCAHSGREAQRTPQTTLRFP------------AWPQGGGGAAP--GADSVSHKP 835
IL P GR + P R PQG G AAP G VS P
Sbjct: 303 EILYCPYWGVPGRGGRSAPGMHARLARPLGAVVTGPDLGGPQGVGSAAPYWGRGEVSVGP 362
Query: 836 EPRAILPEPSP 846
+ LP +P
Sbjct: 363 AHQPFLPPEAP 373
>gi|239744415 PREDICTED: similar to unc-93 homolog B1 (C. elegans)
[Homo sapiens]
Length = 503
Score = 33.1 bits (74), Expect = 1.2
Identities = 36/131 (27%), Positives = 44/131 (33%), Gaps = 24/131 (18%)
Query: 740 RTKVTKPTLAV---SSCTAMKFKNTVFTGSGPDTTVISFSSSRASGPP-------KPRTS 789
R T+P+ SSC + G GP V + +S GPP K
Sbjct: 217 RALSTRPSAGAGSGSSCDPAPLQILPAVGRGPGPRVTALCTSYPQGPPRATIFLQKMSNK 276
Query: 790 RILGFPLCAHSGREAQRTPQTTLRFP------------AWPQGGGGAAP--GADSVSHKP 835
IL P GR + P R PQG G AAP G VS P
Sbjct: 277 EILYCPYWGVPGRGGRSAPGMHARLARPLGAVVTGPDLGGPQGVGSAAPYWGRGEVSVGP 336
Query: 836 EPRAILPEPSP 846
+ LP +P
Sbjct: 337 AHQPFLPPEAP 347
>gi|7656967 cadherin EGF LAG seven-pass G-type receptor 1 [Homo
sapiens]
Length = 3014
Score = 33.1 bits (74), Expect = 1.2
Identities = 28/84 (33%), Positives = 32/84 (38%), Gaps = 5/84 (5%)
Query: 783 PPKPRTSRILGFPLCAHSGREAQRTPQTTLRFPAWPQGGG----GAAPGADSVSHKPEPR 838
PP+PR R G P+C G + LR A G A G S S P P
Sbjct: 159 PPRPRP-RCPGRPICLPPGGSVRLRLLCALRRAAGAVRVGLALEAATAGTPSASPSPSPP 217
Query: 839 AILPEPSPRVGPCGGARSLLAGRG 862
P R GP AR +GRG
Sbjct: 218 LPPNLPEARAGPARRARRGTSGRG 241
>gi|63175652 CREBBP/EP300 inhibitor 2 [Homo sapiens]
Length = 236
Score = 33.1 bits (74), Expect = 1.2
Identities = 39/142 (27%), Positives = 53/142 (37%), Gaps = 13/142 (9%)
Query: 51 GRGHKQKAT----EAQQTRQAPALALWPPRSASSELRVLLLALRVSARQVP-AAPGCVTV 105
GRG ++ A EA + A A P + + A +AR P AA
Sbjct: 28 GRGRREPAPAQPEEAGEGAMAAARGGPVPAAREGRMAAARAAPAAAARGAPVAAAALARA 87
Query: 106 AGTGHQRPVPQPLRHLAQQAPADLLGEPCPLLLTLLGQLGQQLWEKDGHHRRGLAALHPV 165
A G + P R A LLGEP + + G + + H GLAAL P
Sbjct: 88 AAAGRESPAAAAAREARMAEVARLLGEP-------VDEEGPEGRPRSRHGNGGLAAL-PY 139
Query: 166 CPPVRPWPHLGLLFCQLLQDLL 187
P LG+ + Q L+ L
Sbjct: 140 LRLRHPLSVLGINYQQFLRHYL 161
>gi|33667117 MICAL-like 2 isoform 1 [Homo sapiens]
Length = 904
Score = 33.1 bits (74), Expect = 1.2
Identities = 32/127 (25%), Positives = 48/127 (37%), Gaps = 19/127 (14%)
Query: 766 SGPDTTVISFSSSRASGPPKPRTSRILGFPLCAHSGREAQRTPQTTLRFPAWPQGGGGAA 825
+ P+ S +S P +P SR+ P E + P+ T + P G AA
Sbjct: 302 AAPNPAATSATSVHVRSPARPSESRLAPTPT------EGKVRPRVT---NSSPMGWSSAA 352
Query: 826 PGADSVSHKPEPRAILPEPSPRVGPCGGARSLLAGRGLEDLDIGDRSVSSPDSLSAHDVH 885
P + + P P+P P GGA + A ++ S S SA V
Sbjct: 353 PCTAAAASHPAVPPSAPDPRPATPQGGGAPRVAA----------PQTTLSSSSTSAATVD 402
Query: 886 SPAFSDS 892
PA++ S
Sbjct: 403 PPAWTPS 409
>gi|10190682 chromobox homolog 8 [Homo sapiens]
Length = 389
Score = 33.1 bits (74), Expect = 1.2
Identities = 19/48 (39%), Positives = 24/48 (50%), Gaps = 2/48 (4%)
Query: 824 AAPGADSVSHKPEPRAILPEPS--PRVGPCGGARSLLAGRGLEDLDIG 869
++PG S P+PR LP+PS P P G L GR L+D G
Sbjct: 190 SSPGDSSKKRGPKPRKELPDPSQRPLGEPSAGLGEYLKGRKLDDTPSG 237
>gi|111185957 downstream of tyrosine kinase 7 [Homo sapiens]
Length = 504
Score = 32.7 bits (73), Expect = 1.6
Identities = 28/86 (32%), Positives = 38/86 (44%), Gaps = 10/86 (11%)
Query: 765 GSGPDTTVISFSSSRASGPPKPRTSRILGFP-LCAHSGREAQRTPQTTLRFPAWPQGGGG 823
GSG D +S SSS AS +SR+ +P + S +Q P+ PA Q G
Sbjct: 255 GSGGDDRSLSSSSSEASHLDVSASSRLTAWPEQSSSSASTSQEGPR-----PAAAQAAGE 309
Query: 824 AAPGADSVSHKPEPRAILPEPSPRVG 849
A GA +P P+ + P VG
Sbjct: 310 AMVGAS----RPPPKPLRPRQLQEVG 331
>gi|239757360 PREDICTED: hypothetical protein [Homo sapiens]
Length = 535
Score = 32.7 bits (73), Expect = 1.6
Identities = 68/264 (25%), Positives = 97/264 (36%), Gaps = 42/264 (15%)
Query: 312 AQLPQVS-------LLPAPELDQSLVTSELIQRGGGHLWERQSKASVASHCPDEVAETPV 364
A LP VS ++ EL Q L E + GG+L + + + A + V
Sbjct: 26 ANLPSVSKVSVGQVVVGQVELLQRLEVVEGVALDGGYLGVHEPQLAQAGETLEGARADQV 85
Query: 365 PPLQAYMEL-EEFQPSEPEPCPAPAHLTLPNEGGQLPGPLVHQADVLNGVDQGLRIAGPA 423
P+ ++L + Q + AH + E Q+ PL + L V Q L +A
Sbjct: 86 QPVARQLQLLQAHQGRQVGDVLEVAHAQV--EVAQVDQPLEGR---LRDVFQPLELAQVQ 140
Query: 424 HPQLTLVVVRNVVRGFGVDEQGRQAQRLVGLVPQADVVALATMPSTMTSVKGSKDLSGRR 483
PQ RG V+ G A L G+VPQ ++ L P + S G L +
Sbjct: 141 APQ----------RGHAVEGVGGDA--LDGVVPQPELPQLGQTPPGLPSALGKFSLYWKP 188
Query: 484 MNSGLSRYPLRPLYSKT-PALSCIATSGGLEVERNKLAPYVPEELGHVVGGVHAGALGVD 542
G+ P PL+ + AL+ I L R L P P L + G +
Sbjct: 189 C-LGICLSPHSPLHGPSLAALTRIHLPEPLRHPRLLLTP--PAALERNGSRFYDGDVA-- 243
Query: 543 AAELLLVDTPQTPWGSWSRYSHLT 566
T WG W RY LT
Sbjct: 244 -----------TAWGCWFRYRVLT 256
>gi|239752594 PREDICTED: hypothetical protein, partial [Homo
sapiens]
Length = 673
Score = 32.7 bits (73), Expect = 1.6
Identities = 36/132 (27%), Positives = 48/132 (36%), Gaps = 17/132 (12%)
Query: 721 SAENIFRMLMRAGGVQGQWRTKVTKPTLAVSSCTAMKFKNTVFTGSGPDTTVISFSSSRA 780
S ++ RML RA PT +S + K +T P I+ + SRA
Sbjct: 300 STASLMRMLPRAS------------PTGMLSRTSLTKMDSTASISRTPPRASITRTPSRA 347
Query: 781 SGPPKPRTSRILGFPLCAHSGREAQRTPQTTLRFPAWPQGGGGAAPGADSVSHKPEPRAI 840
S KP T+ G P A T L A P G P S + P ++
Sbjct: 348 SPTGKPSTASPTGTPSRASPTGSPSTASLTGLSSTASPTG----TPPRASPTGTPSTASL 403
Query: 841 LPEPSPRVGPCG 852
+P PR P G
Sbjct: 404 TRKP-PRASPTG 414
>gi|194097354 G1 to S phase transition 1 isoform 2 [Homo sapiens]
Length = 636
Score = 32.7 bits (73), Expect = 1.6
Identities = 18/42 (42%), Positives = 24/42 (57%), Gaps = 4/42 (9%)
Query: 820 GGGGAAPGADSVSHKPE--PRAILPEPSPRVGPCGGARSLLA 859
GGGG++ G+ S P+ +A + P P GPCGG SL A
Sbjct: 13 GGGGSSSGSSSSDSAPDCWDQADMEAPGP--GPCGGGGSLAA 52
>gi|194018520 G1 to S phase transition 1 isoform 1 [Homo sapiens]
Length = 637
Score = 32.7 bits (73), Expect = 1.6
Identities = 18/42 (42%), Positives = 24/42 (57%), Gaps = 4/42 (9%)
Query: 820 GGGGAAPGADSVSHKPE--PRAILPEPSPRVGPCGGARSLLA 859
GGGG++ G+ S P+ +A + P P GPCGG SL A
Sbjct: 13 GGGGSSSGSSSSDSAPDCWDQADMEAPGP--GPCGGGGSLAA 52
>gi|32307126 nuclear receptor coactivator 3 isoform a [Homo sapiens]
Length = 1424
Score = 32.3 bits (72), Expect = 2.0
Identities = 37/140 (26%), Positives = 51/140 (36%), Gaps = 18/140 (12%)
Query: 773 ISFSSSRASGPPKPRTSRILGFPLCAHSGREAQRTPQTTLRFPAW-------------PQ 819
+ SSRA G P T+ + S A TP ++ P+ P
Sbjct: 409 LQMPSSRAYGLADPSTTGQMSGARYGGSSNIASLTPGPGMQSPSSYQNNNYGLNMSSPPH 468
Query: 820 GGGGAAPGADSVSHKPEPRAILPEPSPRVGPCGGARSLLAGRGLEDLDIGDRSVSSPDSL 879
G G AP ++ P R S + P G S +A G + G+ S SS SL
Sbjct: 469 GSPGLAPNQQNIMISPRNRGSPKIASHQFSPVAGVHSPMASSG----NTGNHSFSS-SSL 523
Query: 880 SAHDVHSPAFSDSPYSQMAS 899
SA S S S ++S
Sbjct: 524 SALQAISEGVGTSLLSTLSS 543
>gi|32307124 nuclear receptor coactivator 3 isoform b [Homo sapiens]
Length = 1420
Score = 32.3 bits (72), Expect = 2.0
Identities = 37/140 (26%), Positives = 51/140 (36%), Gaps = 18/140 (12%)
Query: 773 ISFSSSRASGPPKPRTSRILGFPLCAHSGREAQRTPQTTLRFPAW-------------PQ 819
+ SSRA G P T+ + S A TP ++ P+ P
Sbjct: 409 LQMPSSRAYGLADPSTTGQMSGARYGGSSNIASLTPGPGMQSPSSYQNNNYGLNMSSPPH 468
Query: 820 GGGGAAPGADSVSHKPEPRAILPEPSPRVGPCGGARSLLAGRGLEDLDIGDRSVSSPDSL 879
G G AP ++ P R S + P G S +A G + G+ S SS SL
Sbjct: 469 GSPGLAPNQQNIMISPRNRGSPKIASHQFSPVAGVHSPMASSG----NTGNHSFSS-SSL 523
Query: 880 SAHDVHSPAFSDSPYSQMAS 899
SA S S S ++S
Sbjct: 524 SALQAISEGVGTSLLSTLSS 543
>gi|119395758 diaphanous 1 isoform 1 [Homo sapiens]
Length = 1272
Score = 32.3 bits (72), Expect = 2.0
Identities = 23/74 (31%), Positives = 32/74 (43%), Gaps = 4/74 (5%)
Query: 613 DEQPGLGGPQGRVQHFVESRVALLLVDEVHELLQ-RQRHAKQKLNTEHRGCEAGRAHSHL 671
DE P GG G+ + F R L+ DE+ R + K+K N+ HR A
Sbjct: 24 DELPSAGGDGGKSKKFTLKR---LMADELERFTSMRIKKEKEKPNSAHRNSSASYGDDPT 80
Query: 672 QQDLVNVRPQTQLV 685
Q L +V + LV
Sbjct: 81 AQSLQDVSDEQVLV 94
Database: hs.faa
Posted date: Aug 4, 2009 4:42 PM
Number of letters in database: 18,247,518
Number of sequences in database: 37,866
Lambda K H
0.318 0.135 0.411
Gapped
Lambda K H
0.267 0.0410 0.140
Matrix: BLOSUM62
Gap Penalties: Existence: 11, Extension: 1
Number of Hits to DB: 40,493,974
Number of Sequences: 37866
Number of extensions: 2210393
Number of successful extensions: 8656
Number of sequences better than 10.0: 30
Number of HSP's better than 10.0 without gapping: 11
Number of HSP's successfully gapped in prelim test: 80
Number of HSP's that attempted gapping in prelim test: 8568
Number of HSP's gapped (non-prelim): 196
length of query: 903
length of database: 18,247,518
effective HSP length: 111
effective length of query: 792
effective length of database: 14,044,392
effective search space: 11123158464
effective search space used: 11123158464
T: 11
A: 40
X1: 16 ( 7.3 bits)
X2: 38 (14.6 bits)
X3: 64 (24.7 bits)
S1: 41 (21.7 bits)
S2: 67 (30.4 bits)
Search results were obtained with NCBI BLAST and RefSeq entries.
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Guide to the Human Genome
Copyright © 2010 by Stewart Scherer. All rights reserved.