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Search of human proteins with 239749777
BLASTP 2.2.11 [Jun-05-2005]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= gi|239749777 PREDICTED: hypothetical protein [Homo sapiens]
(686 letters)
Database: hs.faa
37,866 sequences; 18,247,518 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
gi|239749777 PREDICTED: hypothetical protein [Homo sapiens] 1497 0.0
gi|239744036 PREDICTED: hypothetical protein XP_002343022 [Homo ... 1496 0.0
gi|239743839 PREDICTED: hypothetical protein XP_002342967 [Homo ... 224 2e-58
gi|239741653 PREDICTED: hypothetical protein XP_002342271 [Homo ... 197 4e-50
gi|169163335 PREDICTED: similar to hCG1742442 [Homo sapiens] 75 3e-13
gi|169174843 PREDICTED: similar to hCG1742442 [Homo sapiens] 71 4e-12
gi|169194776 PREDICTED: similar to hCG1742442 [Homo sapiens] 60 7e-09
gi|169190399 PREDICTED: similar to hCG1742442 [Homo sapiens] 60 7e-09
gi|239755286 PREDICTED: similar to hCG1742442 [Homo sapiens] 60 9e-09
gi|169217390 PREDICTED: similar to hCG1742442 [Homo sapiens] 40 0.009
gi|169217347 PREDICTED: similar to hCG1742442 [Homo sapiens] 40 0.009
gi|24308073 protein tyrosine phosphatase, non-receptor type 23 [... 39 0.021
gi|4505939 DNA-directed RNA polymerase II A [Homo sapiens] 38 0.027
gi|239757130 PREDICTED: hypothetical protein FLJ22184 [Homo sapi... 38 0.036
gi|153946391 N-methyl-D-aspartate receptor subunit 2D precursor ... 37 0.047
gi|4758392 forkhead box D1 [Homo sapiens] 37 0.047
gi|11386183 WAS protein family, member 2 [Homo sapiens] 37 0.061
gi|209180481 Cas-Br-M (murine) ecotropic retroviral transforming... 37 0.061
gi|150417989 cyclin K isoform 1 [Homo sapiens] 37 0.061
gi|210032509 hypothetical protein LOC100130302 [Homo sapiens] 37 0.079
gi|13540521 basic helix-loop-helix domain containing, class B, 3... 36 0.10
gi|124249376 proline rich 21 [Homo sapiens] 36 0.14
gi|239751637 PREDICTED: hypothetical protein FLJ22184 [Homo sapi... 35 0.18
gi|239746149 PREDICTED: hypothetical protein LOC80164 [Homo sapi... 35 0.18
gi|155030236 ribonuclease III, nuclear isoform 2 [Homo sapiens] 35 0.30
gi|155030234 ribonuclease III, nuclear isoform 1 [Homo sapiens] 35 0.30
gi|18677735 proline-rich coiled-coil 1 [Homo sapiens] 34 0.51
gi|239748030 PREDICTED: hypothetical protein XP_002346496 [Homo ... 33 1.1
gi|110832843 TBP-associated factor 4 [Homo sapiens] 33 1.1
gi|42740899 CTAGE family, member 5 isoform 3 [Homo sapiens] 33 1.1
>gi|239749777 PREDICTED: hypothetical protein [Homo sapiens]
Length = 686
Score = 1497 bits (3875), Expect = 0.0
Identities = 686/686 (100%), Positives = 686/686 (100%)
Query: 1 METHPGLADEKRVNKGVCLQLGQAALSQAYLHLRLPLHFSFHITVQECQAALAFYPFSTI 60
METHPGLADEKRVNKGVCLQLGQAALSQAYLHLRLPLHFSFHITVQECQAALAFYPFSTI
Sbjct: 1 METHPGLADEKRVNKGVCLQLGQAALSQAYLHLRLPLHFSFHITVQECQAALAFYPFSTI 60
Query: 61 VPLPPRLFATAAFCRHRRGFLPPLLFATAAAAFCPQHWGFLRLFDPPLGLFAAFCARRPA 120
VPLPPRLFATAAFCRHRRGFLPPLLFATAAAAFCPQHWGFLRLFDPPLGLFAAFCARRPA
Sbjct: 61 VPLPPRLFATAAFCRHRRGFLPPLLFATAAAAFCPQHWGFLRLFDPPLGLFAAFCARRPA 120
Query: 121 FLPPPLQLIPRLADFCPRCCSFFPASWISAPAPVAFRHRCCCFLPPPLRVSPATAYCPRC 180
FLPPPLQLIPRLADFCPRCCSFFPASWISAPAPVAFRHRCCCFLPPPLRVSPATAYCPRC
Sbjct: 121 FLPPPLQLIPRLADFCPRCCSFFPASWISAPAPVAFRHRCCCFLPPPLRVSPATAYCPRC 180
Query: 181 RGFLPPPPWHFAPITMAFCGFLPLRLFASEATAFCPWRHGFLALPPRLFVAFCPHHYGFL 240
RGFLPPPPWHFAPITMAFCGFLPLRLFASEATAFCPWRHGFLALPPRLFVAFCPHHYGFL
Sbjct: 181 RGFLPPPPWHFAPITMAFCGFLPLRLFASEATAFCPWRHGFLALPPRLFVAFCPHHYGFL 240
Query: 241 PPRLFASEAMGFLPPWFFAPEATAFCPRRHGFFPVPPRLIAPTAAGFCRHDFLSPPPLLF 300
PPRLFASEAMGFLPPWFFAPEATAFCPRRHGFFPVPPRLIAPTAAGFCRHDFLSPPPLLF
Sbjct: 241 PPRLFASEAMGFLPPWFFAPEATAFCPRRHGFFPVPPRLIAPTAAGFCRHDFLSPPPLLF 300
Query: 301 AAAAFYSHRHGFLVPPPWLFALPQPWLFAPTAEAFCRCAAAAAFCPQSHSFLPSPPRLFA 360
AAAAFYSHRHGFLVPPPWLFALPQPWLFAPTAEAFCRCAAAAAFCPQSHSFLPSPPRLFA
Sbjct: 301 AAAAFYSHRHGFLVPPPWLFALPQPWLFAPTAEAFCRCAAAAAFCPQSHSFLPSPPRLFA 360
Query: 361 QPLQLFAPEATPFCPRHRGFLRHFTPRRCGFLPPPQLLIPIAVAFCSHSFIPPPRLFGPT 420
QPLQLFAPEATPFCPRHRGFLRHFTPRRCGFLPPPQLLIPIAVAFCSHSFIPPPRLFGPT
Sbjct: 361 QPLQLFAPEATPFCPRHRGFLRHFTPRRCGFLPPPQLLIPIAVAFCSHSFIPPPRLFGPT 420
Query: 421 TTAFCPRHHGFWLLPLRLFAAAVFAPAAAAFCGFLPPHSFLASPPWLFVAFLPRRRGFSP 480
TTAFCPRHHGFWLLPLRLFAAAVFAPAAAAFCGFLPPHSFLASPPWLFVAFLPRRRGFSP
Sbjct: 421 TTAFCPRHHGFWLLPLRLFAAAVFAPAAAAFCGFLPPHSFLASPPWLFVAFLPRRRGFSP 480
Query: 481 PPLRLFAAAVFVPAAAAFCPPAAAVAFCPRHYSFSLLQLFVPEATAFCPHRCGILHPPPG 540
PPLRLFAAAVFVPAAAAFCPPAAAVAFCPRHYSFSLLQLFVPEATAFCPHRCGILHPPPG
Sbjct: 481 PPLRLFAAAVFVPAAAAFCPPAAAVAFCPRHYSFSLLQLFVPEATAFCPHRCGILHPPPG 540
Query: 541 LFAPASVTFCHRCFFPRHYGILPPPPRVFAAVAFFNRHCRSFLPPLPQSFASAAGAFRPC 600
LFAPASVTFCHRCFFPRHYGILPPPPRVFAAVAFFNRHCRSFLPPLPQSFASAAGAFRPC
Sbjct: 541 LFAPASVTFCHRCFFPRHYGILPPPPRVFAAVAFFNRHCRSFLPPLPQSFASAAGAFRPC 600
Query: 601 RCSFFAPCHHGFFPQPPRLFVFFLPPLPLLFAPASVAFYPPQCGFLSPPPRLSPTAAVAF 660
RCSFFAPCHHGFFPQPPRLFVFFLPPLPLLFAPASVAFYPPQCGFLSPPPRLSPTAAVAF
Sbjct: 601 RCSFFAPCHHGFFPQPPRLFVFFLPPLPLLFAPASVAFYPPQCGFLSPPPRLSPTAAVAF 660
Query: 661 CPCCRAFLPPWLFVPAAFGTLISLEI 686
CPCCRAFLPPWLFVPAAFGTLISLEI
Sbjct: 661 CPCCRAFLPPWLFVPAAFGTLISLEI 686
>gi|239744036 PREDICTED: hypothetical protein XP_002343022 [Homo
sapiens]
Length = 686
Score = 1496 bits (3872), Expect = 0.0
Identities = 685/686 (99%), Positives = 686/686 (100%)
Query: 1 METHPGLADEKRVNKGVCLQLGQAALSQAYLHLRLPLHFSFHITVQECQAALAFYPFSTI 60
METHPGLADEKRVNKGVCLQLGQAALSQAYLHLRLPLHFSFHITVQECQAALAFYPFSTI
Sbjct: 1 METHPGLADEKRVNKGVCLQLGQAALSQAYLHLRLPLHFSFHITVQECQAALAFYPFSTI 60
Query: 61 VPLPPRLFATAAFCRHRRGFLPPLLFATAAAAFCPQHWGFLRLFDPPLGLFAAFCARRPA 120
VPLPPRLFATAAFCRHRRGFLPPLLFATAAAAFCPQHWGFLRLFDPPLGLFAAFCARRPA
Sbjct: 61 VPLPPRLFATAAFCRHRRGFLPPLLFATAAAAFCPQHWGFLRLFDPPLGLFAAFCARRPA 120
Query: 121 FLPPPLQLIPRLADFCPRCCSFFPASWISAPAPVAFRHRCCCFLPPPLRVSPATAYCPRC 180
FLPPPLQLIPRLADFCPRCCSFFPASWISAPAPVAFRHRCCCFLPPPLRVSPATAYCPRC
Sbjct: 121 FLPPPLQLIPRLADFCPRCCSFFPASWISAPAPVAFRHRCCCFLPPPLRVSPATAYCPRC 180
Query: 181 RGFLPPPPWHFAPITMAFCGFLPLRLFASEATAFCPWRHGFLALPPRLFVAFCPHHYGFL 240
RGFLPPPPWHFAPITMAFCGFLPLRLFASEATAFCPWRHGFLALPPRLFVAFCPHHYGFL
Sbjct: 181 RGFLPPPPWHFAPITMAFCGFLPLRLFASEATAFCPWRHGFLALPPRLFVAFCPHHYGFL 240
Query: 241 PPRLFASEAMGFLPPWFFAPEATAFCPRRHGFFPVPPRLIAPTAAGFCRHDFLSPPPLLF 300
PPRLFASEAMGFLPPWFFAPEATAFCPRRHGFFPVPPRLIAPTAAGFCRHDFLSPPPLLF
Sbjct: 241 PPRLFASEAMGFLPPWFFAPEATAFCPRRHGFFPVPPRLIAPTAAGFCRHDFLSPPPLLF 300
Query: 301 AAAAFYSHRHGFLVPPPWLFALPQPWLFAPTAEAFCRCAAAAAFCPQSHSFLPSPPRLFA 360
AAAAFYSHRHGFLVPPPWLFALPQPWLFAPT+EAFCRCAAAAAFCPQSHSFLPSPPRLFA
Sbjct: 301 AAAAFYSHRHGFLVPPPWLFALPQPWLFAPTSEAFCRCAAAAAFCPQSHSFLPSPPRLFA 360
Query: 361 QPLQLFAPEATPFCPRHRGFLRHFTPRRCGFLPPPQLLIPIAVAFCSHSFIPPPRLFGPT 420
QPLQLFAPEATPFCPRHRGFLRHFTPRRCGFLPPPQLLIPIAVAFCSHSFIPPPRLFGPT
Sbjct: 361 QPLQLFAPEATPFCPRHRGFLRHFTPRRCGFLPPPQLLIPIAVAFCSHSFIPPPRLFGPT 420
Query: 421 TTAFCPRHHGFWLLPLRLFAAAVFAPAAAAFCGFLPPHSFLASPPWLFVAFLPRRRGFSP 480
TTAFCPRHHGFWLLPLRLFAAAVFAPAAAAFCGFLPPHSFLASPPWLFVAFLPRRRGFSP
Sbjct: 421 TTAFCPRHHGFWLLPLRLFAAAVFAPAAAAFCGFLPPHSFLASPPWLFVAFLPRRRGFSP 480
Query: 481 PPLRLFAAAVFVPAAAAFCPPAAAVAFCPRHYSFSLLQLFVPEATAFCPHRCGILHPPPG 540
PPLRLFAAAVFVPAAAAFCPPAAAVAFCPRHYSFSLLQLFVPEATAFCPHRCGILHPPPG
Sbjct: 481 PPLRLFAAAVFVPAAAAFCPPAAAVAFCPRHYSFSLLQLFVPEATAFCPHRCGILHPPPG 540
Query: 541 LFAPASVTFCHRCFFPRHYGILPPPPRVFAAVAFFNRHCRSFLPPLPQSFASAAGAFRPC 600
LFAPASVTFCHRCFFPRHYGILPPPPRVFAAVAFFNRHCRSFLPPLPQSFASAAGAFRPC
Sbjct: 541 LFAPASVTFCHRCFFPRHYGILPPPPRVFAAVAFFNRHCRSFLPPLPQSFASAAGAFRPC 600
Query: 601 RCSFFAPCHHGFFPQPPRLFVFFLPPLPLLFAPASVAFYPPQCGFLSPPPRLSPTAAVAF 660
RCSFFAPCHHGFFPQPPRLFVFFLPPLPLLFAPASVAFYPPQCGFLSPPPRLSPTAAVAF
Sbjct: 601 RCSFFAPCHHGFFPQPPRLFVFFLPPLPLLFAPASVAFYPPQCGFLSPPPRLSPTAAVAF 660
Query: 661 CPCCRAFLPPWLFVPAAFGTLISLEI 686
CPCCRAFLPPWLFVPAAFGTLISLEI
Sbjct: 661 CPCCRAFLPPWLFVPAAFGTLISLEI 686
>gi|239743839 PREDICTED: hypothetical protein XP_002342967 [Homo
sapiens]
Length = 761
Score = 224 bits (571), Expect = 2e-58
Identities = 232/635 (36%), Positives = 258/635 (40%), Gaps = 175/635 (27%)
Query: 87 ATAAAAFCPQHWGFLRLFDPPLGLFAAFCARRPAFLPPPLQLIPRLADFCPRCCSFFPAS 146
+T + FCP +LFDP +F RR FL F A+
Sbjct: 92 STPSPLFCPAS---PQLFDPHHS--GSFALRRRGFL--------------------FSAA 126
Query: 147 WISAPAPVAFRHRCCCFLPPPLR--VSPATAYCPRCRGFLPPPPWHFAPITMAFC--GFL 202
+P P F HR FLPPP + P P RGFLPP P P F GFL
Sbjct: 127 AAFSPPPRLFPHRG--FLPPPAASGLCPPRLLIPYRRGFLPPTP---PPPQRLFARPGFL 181
Query: 203 PLRLFASEATAFCPWRHGFLALPPRLFVA---FCPHHYGFLP---------PRLFASEAM 250
P + ATAFCP PRLF PH GFLP PRLF + A
Sbjct: 182 PT---PAAATAFCP---------PRLFARPGFLPPHRRGFLPLTAFYPPPPPRLFVAAAF 229
Query: 251 GFLPPWFFAPEATAFCPRRHGFFPVPPRLIAPTAAGFCRHD---FLSPPPLLFAAAAFYS 307
PPW A R GF P A AA FC F PPP LF AA F S
Sbjct: 230 SPPPPWLSA---------RRGFLPPAA---AAAAAAFCSPTAAAFSPPPPWLFVAATFCS 277
Query: 308 HRHGFLVPPPWLFALPQPWLFAPTAEAF----CR------------CAAAAAFCPQSH-- 349
R F PPP LFA P P LFAP CR A AFC +
Sbjct: 278 TRL-FAPPPPRLFAPPPPRLFAPPPPRLLFPPCRRGFLLPYRGGFFTPTAVAFCRRGFFR 336
Query: 350 --SFLPSPPRLFAQ-PLQLF--------------APEATPFC------PRHRGFLRHFTP 386
+F P PPRLFA P +LF P A FC PR RGFL P
Sbjct: 337 PAAFSPPPPRLFAPLPRRLFHPHCRGFLSPRLFPPPAAAAFCPPRLFHPRRRGFL---PP 393
Query: 387 RRCGFLPPPQ--LLIPIAVAFCSHSFIPPPRLFGPTTTAFCPRHHGFWLLPLRLFAAAVF 444
RR GFL P + L P VAFC PPP AFC +LFA
Sbjct: 394 RRRGFLLPYRGGFLPPAVVAFC-----PPPLFTPAAAAAFC---------STQLFA---- 435
Query: 445 APAAAAFCGFLPPHSFLASPPWLFVAFLPRRRGF-SPPPLRLFAAAVFVPAAAAFCPPAA 503
P+AAAFC PP F PP L F PRRRGF P F+PA A + PP
Sbjct: 436 PPSAAAFCPPPPPQLFAPPPPRL---FHPRRRGFLLDPAFCPHRRRGFLPATAFYPPPPP 492
Query: 504 AVAFCPRHYSFSLLQLFVPEA------TAFC-PHRCGILHPPPGLFAPASVTFCHRCFFP 556
+ P + F+ QLF+P AFC PHR G F PA+V FC R F P
Sbjct: 493 RLFAPPPPWLFARPQLFIPRRRGFLLDPAFCPPHR-------RGFFTPAAVAFCRRGFLP 545
Query: 557 RHYGILPPPPRVFAAVAFFNRHCRSFLPPLPQSFASAAGAFRPCRCSFFAPCHHGFFPQP 616
PPPPR+F R FL P +F A F PCRC FF F P P
Sbjct: 546 PP----PPPPRLFPR--------RGFLSPAAAAFC-APRLFAPCRCGFFPTAL--FVPPP 590
Query: 617 PRLFVFFLPPLPLLFAPASVAFYPPQCGFLSPPPR 651
PRLF PP P LF P + + GFL P R
Sbjct: 591 PRLFA---PPPPWLFTPLVPRLF-ARGGFLHPRRR 621
Score = 196 bits (498), Expect = 6e-50
Identities = 225/620 (36%), Positives = 241/620 (38%), Gaps = 194/620 (31%)
Query: 50 AALAFYPFSTIVPLPPRLF---------ATAAFCR------HRRGFLPPL------LFA- 87
AA AF P PPRLF A + C +RRGFLPP LFA
Sbjct: 125 AAAAFSP-------PPRLFPHRGFLPPPAASGLCPPRLLIPYRRGFLPPTPPPPQRLFAR 177
Query: 88 -------TAAAAFCPQHWGFLRLFDPPLGLFAAFCARRPAFLPPPLQ-LIPRLADFCPRC 139
AA AFCP RLF RP FLPP + +P A + P
Sbjct: 178 PGFLPTPAAATAFCPP-----RLF------------ARPGFLPPHRRGFLPLTAFYPPPP 220
Query: 140 CSFFPASWISAPAPVAFRHRCCCFLPPPLRVSPATAYCPRCRGFLPPPPWHFAPITMAFC 199
F A+ S P P R FLPP + A P F PPPPW F T
Sbjct: 221 PRLFVAAAFSPPPPWLSARR--GFLPPAAAAAAAAFCSPTAAAFSPPPPWLFVAAT---- 274
Query: 200 GFLPLRLFASEATAFCPWRHGFLALPPRLFVAFCPHHYGFLPPR-LFASEAMGFLPPW-- 256
F RLFA PPRLF P + PPR LF GFL P+
Sbjct: 275 -FCSTRLFAPP--------------PPRLFAPPPPRLFAPPPPRLLFPPCRRGFLLPYRG 319
Query: 257 -FFAPEATAFCPRRHGFF------PVPPRLIAPTAAGF----CRHDFLSP---PPLLFAA 302
FF P A AFC R GFF P PPRL AP CR FLSP PP AA
Sbjct: 320 GFFTPTAVAFC--RRGFFRPAAFSPPPPRLFAPLPRRLFHPHCR-GFLSPRLFPPPAAAA 376
Query: 303 ----AAFYSHRHGFLVPPPWLFALPQPWLFAPTA-EAFC-----RCAAAAAFC------- 345
F+ R GFL P F LP F P A AFC AAAAAFC
Sbjct: 377 FCPPRLFHPRRRGFLPPRRRGFLLPYRGGFLPPAVVAFCPPPLFTPAAAAAFCSTQLFAP 436
Query: 346 PQSHSFLPSPPRLFAQPLQLFAPEATP-FCPRHRGFLRH--FTP-RRCGFLPPPQLLIPI 401
P + +F P PP QLFAP F PR RGFL F P RR GFLP P
Sbjct: 437 PSAAAFCPPPPP------QLFAPPPPRLFHPRRRGFLLDPAFCPHRRRGFLPATAFYPP- 489
Query: 402 AVAFCSHSFIPPPRLFGP-------TTTAFCPRHHGFWLLPLRL--FAAAVFAPAAAAFC 452
PPPRLF P F PR GF L P F PAA AFC
Sbjct: 490 ----------PPPRLFAPPPPWLFARPQLFIPRRRGFLLDPAFCPPHRRGFFTPAAVAFC 539
Query: 453 --GFLPPHSFLASPPWLFVAFLPRRRGFSPPPLRLFAAAVFV-PAAAAFCPPAAAVAFCP 509
GFLPP PPP RLF F+ PAAAAFC P F P
Sbjct: 540 RRGFLPP---------------------PPPPPRLFPRRGFLSPAAAAFCAPR---LFAP 575
Query: 510 RHYSFSLLQLFVPEATAFCPHRCGILHPPPGLFAPASVTFCHRCFFPRHYGILPPPPRVF 569
F LFVP PPP LFAP P + P PR+F
Sbjct: 576 CRCGFFPTALFVP--------------PPPRLFAP-----------PPPWLFTPLVPRLF 610
Query: 570 AAVAFFNRHCRSFLPPLPQS 589
A F + R FLP PQS
Sbjct: 611 ARGGFLHPRRRGFLPSQPQS 630
Score = 150 bits (379), Expect = 4e-36
Identities = 161/432 (37%), Positives = 177/432 (40%), Gaps = 104/432 (24%)
Query: 272 FFPVPPRLIAPTAAGFCRHDFLSPPPLLFAAAAFYSHRHGFLVPPPWLFALPQPWLFAPT 331
F P P+L P +G L LF+AAA +S PPP LF + +L P
Sbjct: 98 FCPASPQLFDPHHSGSFA---LRRRGFLFSAAAAFS-------PPPRLFP-HRGFLPPPA 146
Query: 332 AEAFCRCAAAAAFCPQSHSFLPSPP----RLFAQPLQLFAPEA-TPFCP----RHRGFLR 382
A C P FLP P RLFA+P L P A T FCP GFL
Sbjct: 147 ASGLC---PPRLLIPYRRGFLPPTPPPPQRLFARPGFLPTPAAATAFCPPRLFARPGFL- 202
Query: 383 HFTPRRCGFLPPPQLLIPIAVAFCSHSFIPPPRLFGPTTTAFCPRHHGFWLLPLRLFAAA 442
P R GFLP P PPPRLF AF P WL R F
Sbjct: 203 --PPHRRGFLPLTAFYPP-----------PPPRLF--VAAAFSPPPP--WLSARRGFLPP 245
Query: 443 VFAPAAAAFCG-----FLPPHSFLASPPWLFVAF-LPRRRGFSPPPLRLFAAAVFVPAAA 496
A AAAAFC F PP PPWLFVA R F+PPP RLFA P
Sbjct: 246 AAAAAAAAFCSPTAAAFSPP------PPWLFVAATFCSTRLFAPPPPRLFAP----PPPR 295
Query: 497 AFCPPAAAVAFCPRHYSFSLLQLFVPEATAFCPHRCGILHPPPGLFAPASVTFCHRCFFP 556
F PP + F P F L P+R G F P +V FC R FF
Sbjct: 296 LFAPPPPRLLFPPCRRGFLL------------PYR-------GGFFTPTAVAFCRRGFF- 335
Query: 557 RHYGILPPPPRVFAAVA--FFNRHCRSFLPPLPQSFAS-AAGAFRPCRCSFFAPCHHGFF 613
R PPPPR+FA + F+ HCR FL P + F AA AF P R F P GF
Sbjct: 336 RPAAFSPPPPRLFAPLPRRLFHPHCRGFLSP--RLFPPPAAAAFCPPR--LFHPRRRGFL 391
Query: 614 PQPPRLFVFFLPPLPLLFAPASVAFYPPQCGFLSPPPRLSPTAAVAFC-------PCCRA 666
P PR F LP PA VAF PPP +P AA AFC P A
Sbjct: 392 P--PRRRGFLLPYRGGFLPPAVVAF--------CPPPLFTPAAAAAFCSTQLFAPPSAAA 441
Query: 667 FL---PPWLFVP 675
F PP LF P
Sbjct: 442 FCPPPPPQLFAP 453
Score = 132 bits (331), Expect = 1e-30
Identities = 138/372 (37%), Positives = 151/372 (40%), Gaps = 96/372 (25%)
Query: 323 PQPWLFAPTAEAFCRCAAAAAFCPQSHSFLPSPPRLFAQPLQLFAPEATPFCPRHRGFLR 382
P P LF P + + +F + FL S F+ P +LF HRGFL
Sbjct: 94 PSP-LFCPASPQLFDPHHSGSFALRRRGFLFSAAAAFSPPPRLFP---------HRGFL- 142
Query: 383 HFTPRRCGFLPPPQLLIPIAVAFCSHSFIPPPRLFG-----PT---TTAFCPRHHGFWLL 434
P L PP+LLIP F + PP RLF PT TAFCP
Sbjct: 143 --PPPAASGLCPPRLLIPYRRGFLPPTPPPPQRLFARPGFLPTPAAATAFCPP------- 193
Query: 435 PLRLFAAAVFAPAAAAFCGFLPPHSFLASPP-WLFVAFLPRRRGFSPPPLRLFAAAVFVP 493
RLFA F P GFLP +F PP LFVA FSPPP L A F+P
Sbjct: 194 --RLFARPGFLPPHRR--GFLPLTAFYPPPPPRLFVA-----AAFSPPPPWLSARRGFLP 244
Query: 494 AAAAFCPPAAAVAFCPRHYSFSLLQLFVPEATAFCPHRCGILHPPPGLFAPASVTFCHRC 553
AAA AAA AFC P A AF P PPP LF A TFC
Sbjct: 245 PAAA----AAAAAFCS------------PTAAAFSP-------PPPWLFVAA--TFCSTR 279
Query: 554 FFPRHYGILPPPPRVFAAVAFFNRHCRSFLPPLPQSFASAAGAFRPCRCSFFAPCHHGFF 613
F PPPPR+FA R F PP P+ F PCR F P GFF
Sbjct: 280 LFA------PPPPRLFAPPP-----PRLFAPPPPRLL------FPPCRRGFLLPYRGGFF 322
Query: 614 PQPPRLF--------VFFLPPLPLLFAPASVAFYPPQC-GFLSPPPRLSPTAAVAFC--- 661
F F PP P LFAP + P C GFLS P P AA AFC
Sbjct: 323 TPTAVAFCRRGFFRPAAFSPPPPRLFAPLPRRLFHPHCRGFLS-PRLFPPPAAAAFCPPR 381
Query: 662 ---PCCRAFLPP 670
P R FLPP
Sbjct: 382 LFHPRRRGFLPP 393
Score = 32.0 bits (71), Expect = 2.0
Identities = 25/67 (37%), Positives = 28/67 (41%), Gaps = 8/67 (11%)
Query: 623 FLPPLPLLFAPA-SVAFYPPQCGFL-------SPPPRLSPTAAVAFCPCCRAFLPPWLFV 674
F P P LF P S +F + GFL SPPPRL P P PP L +
Sbjct: 98 FCPASPQLFDPHHSGSFALRRRGFLFSAAAAFSPPPRLFPHRGFLPPPAASGLCPPRLLI 157
Query: 675 PAAFGTL 681
P G L
Sbjct: 158 PYRRGFL 164
>gi|239741653 PREDICTED: hypothetical protein XP_002342271 [Homo
sapiens]
Length = 636
Score = 197 bits (500), Expect = 4e-50
Identities = 216/581 (37%), Positives = 237/581 (40%), Gaps = 179/581 (30%)
Query: 141 SFFPASWISAPAPVAFRHRCCCFLPPPLRV---SPATAYCP------RCRGFLPPPPWHF 191
SF+P S I P VAFR PPP R+ PA+A+CP R R FLP ++
Sbjct: 28 SFYPISTILPPTAVAFR-------PPPPRLFPPHPASAFCPPRLSVPRRRDFLPAAAFYP 80
Query: 192 APITMAFCGFLPLRLFASEATAFCPWRHGFLALPPRLFV-----AFCPHHYGFLPPRLFA 246
P PW F LPPRLF AFCP PPR
Sbjct: 81 PP----------------------PWL--FAPLPPRLFAPHPASAFCPPRLCCDPPR--- 113
Query: 247 SEAMGFLPPWFFAPEATAFCPRRHGFFPVPPRLIAPTAAGFCRHDFLSPPPLLFAAAAFY 306
GF+ P RR GF P AAGFC PPP LF AA F
Sbjct: 114 --HRGFMSP------------RRRGFLP---------AAGFC-----PPPPRLFVAAGFL 145
Query: 307 SHR-HGFLVP------PPWLFALPQPW---LFAPTAEAFCRCA----AAAAFC------P 346
R GF P PP LFA P+P LFAP A F R AAAAFC P
Sbjct: 146 PPRPRGFFPPADAAFCPPRLFATPRPRATRLFAPAAALFARPGFLPPAAAAFCRRGFLHP 205
Query: 347 QSHSFLPSPPRLFAQPLQLFAPEATPFCPRHRGFLRHFTPRRCGFLPPPQ---LLIPIAV 403
+ H F P PRLFA+P F P P HRG L TPRR GFLPPP+ L P A
Sbjct: 206 RRHGFFP--PRLFARPG--FLP------PSHRGLL---TPRRRGFLPPPRHRGFLPPPAT 252
Query: 404 AFCSHSFIPPPRLFGPTTT------AFCPRHHGFWLLPLRLFAAAVFAPAAAAFCGFLPP 457
A S PPRLF P AFC H +L P R P AA C P
Sbjct: 253 AAFS-----PPRLFTPCRRGFLLDPAFCSSHRRGFLPPTR--------PGAADIC---PS 296
Query: 458 HSFLASPPWLFV--AFLPRRRGFSPPPLRLFAAAVFVPAAAAFCPPAAAVAFCPRHYSFS 515
F P LF FLPRRR R V +PAAAA AAA A +F
Sbjct: 297 RLFAPPSPRLFPRPGFLPRRRRGVLAHRR---RGVLLPAAAAAAAAAAAAAAAAA--AFC 351
Query: 516 LLQLFVPE-ATAFCPH---------RCGILHPPPGLFAP----ASVTFCHRCFFP----- 556
L QLF P A AFCP R G LHP F P + R FFP
Sbjct: 352 LTQLFAPPTAAAFCPPPAPVPRLFARRGFLHPRRRGFLPLFRRGFLPLFRRGFFPAPPRL 411
Query: 557 ---RHYGILPPPP---RVFAAVAFFNRHCRSFLPPLPQSFASAAGAFRPCRCSFFAPCHH 610
R G LPPPP R+FA + F +F PP P + A F P
Sbjct: 412 FILRRRGFLPPPPPPPRLFARLGFLPPAAAAFCPPPPAAAAFCLRGFLP---------DP 462
Query: 611 GFFPQPPRLFVFFLPPLPLLFAPASVAFYPPQCGFLSPPPR 651
F P PPRLF PP P LFAP + + GFL P R
Sbjct: 463 AFSPPPPRLFA---PPAPRLFAPPVPRLFARR-GFLHPRRR 499
Score = 186 bits (472), Expect = 6e-47
Identities = 210/567 (37%), Positives = 231/567 (40%), Gaps = 173/567 (30%)
Query: 26 LSQAYLHLRLPLHFSFHITVQECQAALAFYPFSTIV--------PLPPRLF---ATAAFC 74
+SQAY+ L LH S+HIT+Q+ QA +FYP STI+ P PPRLF +AFC
Sbjct: 1 MSQAYIFFCLWLHISYHITLQQYQAVPSFYPISTILPPTAVAFRPPPPRLFPPHPASAFC 60
Query: 75 ------RHRRGFLPPLLFATAAAAFCPQHWGFLRLFDPPLGLFAAFCARRPAFLPPPLQL 128
RR FLP AAA + P W F L P LFA A AF PP L
Sbjct: 61 PPRLSVPRRRDFLP------AAAFYPPPPWLFAPL---PPRLFAPHPA--SAFCPPRLCC 109
Query: 129 IP--RLADFCPRCCSFFPASWISAPAPVAFRHRCCCFLPPPLRVSPATAYC-PRCRGFLP 185
P PR F PA+ F PPP R+ A + PR RGF P
Sbjct: 110 DPPRHRGFMSPRRRGFLPAAG---------------FCPPPPRLFVAAGFLPPRPRGFFP 154
Query: 186 PPPWHFAPITMAFCGFLP--LRLFASEATAFCPWRHGFLALPPRLFVAFC------PHHY 237
P F P + F P RLFA A F R GFL P AFC P +
Sbjct: 155 PADAAFCPPRL-FATPRPRATRLFAPAAALFA--RPGFL---PPAAAAFCRRGFLHPRRH 208
Query: 238 GFLPPRLFASEAMGFLPP---WFFAPEATAFC--PRRHGFFP-------VPPRLIAPTAA 285
GF PPRLFA GFLPP P F PR GF P PPRL P
Sbjct: 209 GFFPPRLFARP--GFLPPSHRGLLTPRRRGFLPPPRHRGFLPPPATAAFSPPRLFTP--- 263
Query: 286 GFCRHDFLSPPPLLFAAAAFYSHRHGFLVP---------PPWLFALPQPWLF-------- 328
CR FL P A SHR GFL P P LFA P P LF
Sbjct: 264 --CRRGFLLDP------AFCSSHRRGFLPPTRPGAADICPSRLFAPPSPRLFPRPGFLPR 315
Query: 329 -------------------APTAEAFCRCAAAAAFC-------PQSHSFLPSP---PRLF 359
A A A AAAAAFC P + +F P P PRLF
Sbjct: 316 RRRGVLAHRRRGVLLPAAAAAAAAAAAAAAAAAAFCLTQLFAPPTAAAFCPPPAPVPRLF 375
Query: 360 AQPLQLFAPEATPFCPRHRGFL----RHFTPR-RCGFLP-PPQLLIPIAVAFCSHSFIPP 413
A+ L PR RGFL R F P R GF P PP+L I F PP
Sbjct: 376 ARRGFLH--------PRRRGFLPLFRRGFLPLFRRGFFPAPPRLFILRRRGFLPPP-PPP 426
Query: 414 PRLFG------PTTTAFCPRHHGFWLLPLRLFAAAVFAPAAAAFC--GFLPPHSFLASPP 465
PRLF P AFCP PAAAAFC GFLP +F PP
Sbjct: 427 PRLFARLGFLPPAAAAFCPP-----------------PPAAAAFCLRGFLPDPAFSPPPP 469
Query: 466 WLFVAFLPRRRGFSPPPLRLFAAAVFV 492
LF P R F+PP RLFA F+
Sbjct: 470 RLFAP--PAPRLFAPPVPRLFARRGFL 494
Score = 154 bits (390), Expect = 2e-37
Identities = 187/527 (35%), Positives = 202/527 (38%), Gaps = 173/527 (32%)
Query: 258 FAPEATAFCPRRHGFFPVPPRLIAP-TAAGFC--------RHDFLSPPPLLFAAAAFYSH 308
F P +T P F P PPRL P A+ FC R DFL AAAFY
Sbjct: 29 FYPISTILPPTAVAFRPPPPRLFPPHPASAFCPPRLSVPRRRDFLP-------AAAFYP- 80
Query: 309 RHGFLVPPPWLFALPQPWLFAPTAEAFCRCAAAAAFCPQSHSFLPSPPRLFAQPLQLFAP 368
PPPWLFA P LFAP A+AFCP PRL P
Sbjct: 81 ------PPPWLFAPLPPRLFAPHP--------ASAFCP---------PRLCCDP------ 111
Query: 369 EATPFCPRHRGFLRHFTPRRCGFLPPPQLLIPIAVAFCSHSFIPP-PR-LFGPTTTAFCP 426
PRHRGF+ +PRR GFLP P F + F+PP PR F P AFCP
Sbjct: 112 ------PRHRGFM---SPRRRGFLPAAGFCPPPPRLFVAAGFLPPRPRGFFPPADAAFCP 162
Query: 427 RHHGFWLLP--LRLFA--AAVFA------PAAAAFC--GFLPPHSFLASPPWLFV--AFL 472
P RLFA AA+FA PAAAAFC GFL P PP LF FL
Sbjct: 163 PRLFATPRPRATRLFAPAAALFARPGFLPPAAAAFCRRGFLHPRRHGFFPPRLFARPGFL 222
Query: 473 P---------RRRGFSPPPLRLFAAAVFVPAAAAFCPPAAAV----------AFCPRHYS 513
P RRRGF PPP + PA AAF PP AFC H
Sbjct: 223 PPSHRGLLTPRRRGFLPPPRH--RGFLPPPATAAFSPPRLFTPCRRGFLLDPAFCSSHRR 280
Query: 514 FSLLQLFVPEATAFCPHRCGI-----LHPPPGLF-------------------------- 542
L P A CP R L P PG
Sbjct: 281 -GFLPPTRPGAADICPSRLFAPPSPRLFPRPGFLPRRRRGVLAHRRRGVLLPAAAAAAAA 339
Query: 543 ----APASVTFCHRCFF--PRHYGILPPP---PRVFAAVAFFNRHCRSFLPPLPQSFASA 593
A A+ FC F P PPP PR+FA F + R FLP + F
Sbjct: 340 AAAAAAAAAAFCLTQLFAPPTAAAFCPPPAPVPRLFARRGFLHPRRRGFLPLFRRGFLPL 399
Query: 594 AGAFRPCRCSFFAPCHHGFFPQPPRLFVF----FLPPLP---LLFA------PASVAFYP 640
FR GFFP PPRLF+ FLPP P LFA PA+ AF P
Sbjct: 400 ---FR-----------RGFFPAPPRLFILRRRGFLPPPPPPPRLFARLGFLPPAAAAFCP 445
Query: 641 PQ------C--GFLSPPPRLSPTAAVAFCPCC-RAFLPPWLFVPAAF 678
P C GFL P P SP F P R F PP VP F
Sbjct: 446 PPPAAAAFCLRGFL-PDPAFSPPPPRLFAPPAPRLFAPP---VPRLF 488
Score = 105 bits (261), Expect = 2e-22
Identities = 119/310 (38%), Positives = 128/310 (41%), Gaps = 86/310 (27%)
Query: 391 FLPPPQLLIPIAVAFCSHSFIPPPRLFGP-TTTAFCPRHHGFWLLPLRLFAAAVFAPAAA 449
F P +L P AVAF PPPRLF P +AFCP L + F PAAA
Sbjct: 29 FYPISTILPPTAVAFRP----PPPRLFPPHPASAFCPPR-------LSVPRRRDFLPAAA 77
Query: 450 AFCGFLPPHSFLASPPWLFVAFLPRRRGFSPPPLRLFAAAVFVPAAAAFCPPAAAVAFCP 509
F PP PPWLF PR F+P P A+AFCPP P
Sbjct: 78 ----FYPP------PPWLFAPLPPRL--FAPHP------------ASAFCPPRLCCD-PP 112
Query: 510 RHYSFSLLQL--FVPEATAFCPH------RCGILHPPP-GLFAPASVTFCHRCFF--PRH 558
RH F + F+P A FCP G L P P G F PA FC F PR
Sbjct: 113 RHRGFMSPRRRGFLP-AAGFCPPPPRLFVAAGFLPPRPRGFFPPADAAFCPPRLFATPR- 170
Query: 559 YGILPPPPRVFA-AVAFFNRHCRSFLPPLPQSFASAAGAFRPCRCSFFAPCHHGFFPQPP 617
P R+FA A A F R FLPP AA AF CR F P HGFFP P
Sbjct: 171 ----PRATRLFAPAAALFARP--GFLPP-------AAAAF--CRRGFLHPRRHGFFP--P 213
Query: 618 RLFVF--FLPPLPL-LFAPASVAFYPP--QCGFLSPPPRLSPTAAVAFCPCCRAFLPPWL 672
RLF FLPP L P F PP GFL PP AF PP L
Sbjct: 214 RLFARPGFLPPSHRGLLTPRRRGFLPPPRHRGFLPPP-------------ATAAFSPPRL 260
Query: 673 FVPAAFGTLI 682
F P G L+
Sbjct: 261 FTPCRRGFLL 270
Score = 88.6 bits (218), Expect = 2e-17
Identities = 89/262 (33%), Positives = 104/262 (39%), Gaps = 62/262 (23%)
Query: 466 WLFVAFLPRRRGFSPPPLRLFAAAVFVPAAAAF-------CPPAAAVAFCPRHYSFSLLQ 518
WL +++ + + P + + P A AF PP A AFCP S +
Sbjct: 11 WLHISYHITLQQYQAVPSFYPISTILPPTAVAFRPPPPRLFPPHPASAFCPPRLSVPRRR 70
Query: 519 LFVPEATAFCPHRCGILHP-PPGLFAP-ASVTFC----------HRCFF-PRHYGIL--- 562
F+P A AF P + P PP LFAP + FC HR F PR G L
Sbjct: 71 DFLP-AAAFYPPPPWLFAPLPPRLFAPHPASAFCPPRLCCDPPRHRGFMSPRRRGFLPAA 129
Query: 563 ---PPPPRVFAAVAFFNRHCRSFLPPLPQS-----------------FASAAGAF-RP-- 599
PPPPR+F A F R F PP + FA AA F RP
Sbjct: 130 GFCPPPPRLFVAAGFLPPRPRGFFPPADAAFCPPRLFATPRPRATRLFAPAAALFARPGF 189
Query: 600 --------CRCSFFAPCHHGFFPQPPRLFV--FFLPPLPL-LFAPASVAFYPP--QCGFL 646
CR F P HGFF PPRLF FLPP L P F PP GFL
Sbjct: 190 LPPAAAAFCRRGFLHPRRHGFF--PPRLFARPGFLPPSHRGLLTPRRRGFLPPPRHRGFL 247
Query: 647 SPPPRLSPTAAVAFCPCCRAFL 668
PP + + F PC R FL
Sbjct: 248 PPPATAAFSPPRLFTPCRRGFL 269
>gi|169163335 PREDICTED: similar to hCG1742442 [Homo sapiens]
Length = 295
Score = 74.7 bits (182), Expect = 3e-13
Identities = 82/213 (38%), Positives = 89/213 (41%), Gaps = 61/213 (28%)
Query: 26 LSQAYLHLRLPL--HFSFHITVQE--CQAALA----FYP----FSTIVPLPPRLFATAAF 73
+SQAYLHL L L HF H T + C L F P F P PP+LFA F
Sbjct: 1 MSQAYLHLFLSLAAHFLSHHTPAKPTCAGLLPHLHYFAPRRRGFLPPPPPPPQLFARRGF 60
Query: 74 CR-HRRGFLPPLLFATAAAAFCPQHWGFLRLFDPPLGLFAAFCARRPAFLPPPLQLIPRL 132
H R FLPP AAAA+CP RLFDP RR FLP
Sbjct: 61 LHPHHRSFLPP-----AAAAYCPPS---PRLFDP----------RRRGFLPS-------- 94
Query: 133 ADFCPRCCSFFPASWISAPAPVAFRHRCCCFLPPPLRVSPATAYCPRCRGFLPPPPWHFA 192
A FCPR A+ +PAP AF C PP L P PR RGFL PP
Sbjct: 95 AAFCPRGFLLPAAAAFCSPAPAAF-----CRPPPRLFARPG-FLPPRRRGFLAPP----V 144
Query: 193 PITMAFCGFLPLRLFASEATAFCPWRHGFLALP 225
P A GFL P R GFL+ P
Sbjct: 145 PRLFARRGFLH------------PRRRGFLSQP 165
Score = 73.6 bits (179), Expect = 6e-13
Identities = 60/159 (37%), Positives = 70/159 (44%), Gaps = 43/159 (27%)
Query: 471 FLPRRRGF---SPPPLRLFAAAVFV---------PAAAAFCPPAAAVAFCPRHYSFSLLQ 518
F PRRRGF PPP +LFA F+ PAAAA+CPP+ + F PR F
Sbjct: 37 FAPRRRGFLPPPPPPPQLFARRGFLHPHHRSFLPPAAAAYCPPSPRL-FDPRRRGF---- 91
Query: 519 LFVPEATAFCPHRCGILHPPPGLFAPASVTFCHRCFFPRHYGILPPPPRVFAAVAFFNRH 578
+P A AFCP G PA+ FC P PPPR+FA F
Sbjct: 92 --LPSA-AFCPR---------GFLLPAAAAFCS----PAPAAFCRPPPRLFARPGFLPPR 135
Query: 579 CRSFL-PPLPQSFASAAGAFRPCRCSFFAPCHHGFFPQP 616
R FL PP+P+ FA R F P GF QP
Sbjct: 136 RRGFLAPPVPRLFA---------RRGFLHPRRRGFLSQP 165
Score = 72.8 bits (177), Expect = 1e-12
Identities = 67/163 (41%), Positives = 73/163 (44%), Gaps = 44/163 (26%)
Query: 358 LFAQPLQLFAPEATPFCPRHRGFLRH---FTPRRCGFLPPP------------------Q 396
LF F TP P G L H F PRR GFLPPP
Sbjct: 8 LFLSLAAHFLSHHTPAKPTCAGLLPHLHYFAPRRRGFLPPPPPPPQLFARRGFLHPHHRS 67
Query: 397 LLIPIAVAFCSHSFIPPPRLFGP------TTTAFCPRHHGFWLLPLRLFAAAVFAPAAAA 450
L P A A+C P PRLF P + AFCPR GF LLP AAA +PA AA
Sbjct: 68 FLPPAAAAYCP----PSPRLFDPRRRGFLPSAAFCPR--GF-LLPA---AAAFCSPAPAA 117
Query: 451 FCGFLPPHSFLASPPWLFVAFLPRRRGFSPPPL-RLFAAAVFV 492
FC PP A P +L PRRRGF PP+ RLFA F+
Sbjct: 118 FC--RPPPRLFARPGFL----PPRRRGFLAPPVPRLFARRGFL 154
Score = 71.2 bits (173), Expect = 3e-12
Identities = 58/155 (37%), Positives = 62/155 (40%), Gaps = 38/155 (24%)
Query: 260 PEATAFCPRRHGFFPVPPRLIAPTAAGFCRHDFLSPPPLLFAAAAF-YSHRHGFLVPPPW 318
P F PRR GF P PP PPP LFA F + H FL P
Sbjct: 32 PHLHYFAPRRRGFLPPPP-----------------PPPQLFARRGFLHPHHRSFLPPAAA 74
Query: 319 LFALPQPWLFAPTAEAFCRCA----------AAAAFC-PQSHSFLPSPPRLFAQPLQL-- 365
+ P P LF P F A AAAAFC P +F PPRLFA+P L
Sbjct: 75 AYCPPSPRLFDPRRRGFLPSAAFCPRGFLLPAAAAFCSPAPAAFCRPPPRLFARPGFLPP 134
Query: 366 ----FAPEATPFCPRHRGFLRHFTPRRCGFLPPPQ 396
F P RGFL PRR GFL PQ
Sbjct: 135 RRRGFLAPPVPRLFARRGFLH---PRRRGFLSQPQ 166
Score = 70.5 bits (171), Expect = 5e-12
Identities = 62/159 (38%), Positives = 66/159 (41%), Gaps = 59/159 (37%)
Query: 176 YCPRCRGFLPPPPWHFAPITMAFCGFLPLRLFASEATAFCPWRHGFLALPPRLFVAFCPH 235
+ PR RGFLPPPP P +LFA R GFL PH
Sbjct: 37 FAPRRRGFLPPPP-------------PPPQLFA---------RRGFLH----------PH 64
Query: 236 HYGFLP----------PRLFASEAMGFLPPWFFAPEATAFCPRRHGF-FPVPPRLIAPTA 284
H FLP PRLF GFLP + AFCPR GF P +P
Sbjct: 65 HRSFLPPAAAAYCPPSPRLFDPRRRGFLP-------SAAFCPR--GFLLPAAAAFCSPAP 115
Query: 285 AGFCRHDFLSPPPLLFAAAAFY-SHRHGFLVPP-PWLFA 321
A FCR PPP LFA F R GFL PP P LFA
Sbjct: 116 AAFCR-----PPPRLFARPGFLPPRRRGFLAPPVPRLFA 149
Score = 61.2 bits (147), Expect = 3e-09
Identities = 54/171 (31%), Positives = 66/171 (38%), Gaps = 41/171 (23%)
Query: 513 SFSLLQLFVPEATAFCPHRCGILHPPPGLFAPASVTFCHRCFFPRHYGILPPPP---RVF 569
S + L LF+ A F H H P + H F PR G LPPPP ++F
Sbjct: 2 SQAYLHLFLSLAAHFLSH-----HTPAKPTCAGLLPHLHY-FAPRRRGFLPPPPPPPQLF 55
Query: 570 AAVAFFNRHCRSFLPP--------------------LPQSFASAAGAFRPCRCSFFAPCH 609
A F + H RSFLPP LP + G P +F +P
Sbjct: 56 ARRGFLHPHHRSFLPPAAAAYCPPSPRLFDPRRRGFLPSAAFCPRGFLLPAAAAFCSPAP 115
Query: 610 HGFFPQPPRLFV-----------FFLPPLPLLFAPASVAFYPPQCGFLSPP 649
F PPRLF F PP+P LFA +P + GFLS P
Sbjct: 116 AAFCRPPPRLFARPGFLPPRRRGFLAPPVPRLFARRGF-LHPRRRGFLSQP 165
Score = 39.3 bits (90), Expect = 0.012
Identities = 31/82 (37%), Positives = 33/82 (40%), Gaps = 22/82 (26%)
Query: 604 FFAPCHHGFFPQPPRLFVFFLPPLPLLFA------PASVAFYPPQCGFLSPP-PRLSPTA 656
+FAP GF P PP P P LFA P +F PP PP PRL
Sbjct: 36 YFAPRRRGFLPPPP--------PPPQLFARRGFLHPHHRSFLPPAAAAYCPPSPRL---- 83
Query: 657 AVAFCPCCRAFLPPWLFVPAAF 678
F P R FLP F P F
Sbjct: 84 ---FDPRRRGFLPSAAFCPRGF 102
>gi|169174843 PREDICTED: similar to hCG1742442 [Homo sapiens]
Length = 276
Score = 70.9 bits (172), Expect = 4e-12
Identities = 59/153 (38%), Positives = 67/153 (43%), Gaps = 38/153 (24%)
Query: 446 PAAAAFCGFLPPHSFLASPPWLFVAFLPRRRGFSPPPL-------RLFAAAVF-VPAAAA 497
PA + G LP + F PRRRGF PPP RLFA+A F PAAAA
Sbjct: 22 PAKPSCAGLLPHLHY----------FAPRRRGFLPPPAASGFCPPRLFASAAFCAPAAAA 71
Query: 498 FCPPAAAVAFCPRHYSFSLLQLFVPEATAFCPHRCGILHPPPGLFAPASVTFCHRCFFPR 557
FCPP + R + F+P A AF P PPP LFA PR
Sbjct: 72 FCPPPPRLFAARRRGFLPRRRAFLP-AAAFYP-------PPPRLFA-----------HPR 112
Query: 558 HYGIL-PPPPRVFAAVAFFNRHCRSFLPPLPQS 589
G P PR+FA F + R FLP PQS
Sbjct: 113 CRGFFTPAAPRLFARGGFLHPRRRGFLPSQPQS 145
Score = 69.7 bits (169), Expect = 8e-12
Identities = 67/170 (39%), Positives = 74/170 (43%), Gaps = 34/170 (20%)
Query: 26 LSQAYLHLRLPL--HFSFHITVQECQAALAFYPFSTIVPLPPRLFATAAFCRHRRGFLPP 83
+SQAYLHL L L HF H T + A L P L F RRGFLPP
Sbjct: 1 MSQAYLHLFLSLAAHFLSHHTPAKPSCA----------GLLPHLHY---FAPRRRGFLPP 47
Query: 84 LLFATAAAAFCPQHWGFLRLFDPPLGLFAAFCA-RRPAFLPPPLQLIP-RLADFCPRCCS 141
AA+ FCP P L AAFCA AF PPP +L R F PR +
Sbjct: 48 ----PAASGFCP----------PRLFASAAFCAPAAAAFCPPPPRLFAARRRGFLPRRRA 93
Query: 142 FFPASWISAPAPVAFRH-RCCCFLPP--PLRVSPATAYCPRCRGFLPPPP 188
F PA+ P P F H RC F P P + PR RGFLP P
Sbjct: 94 FLPAAAFYPPPPRLFAHPRCRGFFTPAAPRLFARGGFLHPRRRGFLPSQP 143
Score = 67.0 bits (162), Expect = 5e-11
Identities = 53/152 (34%), Positives = 66/152 (43%), Gaps = 22/152 (14%)
Query: 513 SFSLLQLFVPEATAFCPHRCGILHPPPGLFAPASVTFCHRCFFPRHYGILPPP------- 565
S + L LF+ A F H H P + H F PR G LPPP
Sbjct: 2 SQAYLHLFLSLAAHFLSH-----HTPAKPSCAGLLPHLHY-FAPRRRGFLPPPAASGFCP 55
Query: 566 PRVFAAVAFFNRHCRSFLPPLPQSFASAAGAFRPCRCSFFAPCHHGFFPQPPRLFV---- 621
PR+FA+ AF +F PP P+ FA+ F P R +F F+P PPRLF
Sbjct: 56 PRLFASAAFCAPAAAAFCPPPPRLFAARRRGFLPRRRAFLPAA--AFYPPPPRLFAHPRC 113
Query: 622 --FFLPPLPLLFAPASVAFYPPQCGFLSPPPR 651
FF P P LFA +P + GFL P+
Sbjct: 114 RGFFTPAAPRLFARGGF-LHPRRRGFLPSQPQ 144
Score = 63.5 bits (153), Expect = 6e-10
Identities = 66/172 (38%), Positives = 71/172 (41%), Gaps = 50/172 (29%)
Query: 190 HFAPITMAFCGFLPLRLFASEATAFCPWRHGFLALPPRLFVAFCPHHYGFLPPRLFASEA 249
H P + G LP + F P R GFL PP P GF PPRLFAS A
Sbjct: 19 HHTPAKPSCAGLLPHLHY------FAPRRRGFL--PP-------PAASGFCPPRLFASAA 63
Query: 250 MGFLPPWFFAPEATAFCPRRHGFFPVPPRLIAPTAAGFC--RHDFLSPPPLLFAAAAFYS 307
F AP A AFC P PPRL A GF R FL AAAFY
Sbjct: 64 -------FCAPAAAAFC-------PPPPRLFAARRRGFLPRRRAFL-------PAAAFYP 102
Query: 308 HRHGFLVPPPWLFALPQ-PWLFAPTAEAFCRCAAAAAFC-PQSHSFLPSPPR 357
PPP LFA P+ F P A R A F P+ FLPS P+
Sbjct: 103 -------PPPRLFAHPRCRGFFTPAAP---RLFARGGFLHPRRRGFLPSQPQ 144
Score = 60.5 bits (145), Expect = 5e-09
Identities = 52/121 (42%), Positives = 54/121 (44%), Gaps = 31/121 (25%)
Query: 176 YCPRCRGFLPPPPWHFAPITMAFCGFLPLRLFASEATAFC-PWRHGFLALPPRLFVA--- 231
+ PR RGFLPPP A GF P RLFAS AFC P F PPRLF A
Sbjct: 37 FAPRRRGFLPPP---------AASGFCPPRLFAS--AAFCAPAAAAFCPPPPRLFAARRR 85
Query: 232 -FCPHHYGFLP--------PRLFAS-EAMGFLPPWFFAPEATA----FCPRRHGFFPVPP 277
F P FLP PRLFA GF P AP A PRR GF P P
Sbjct: 86 GFLPRRRAFLPAAAFYPPPPRLFAHPRCRGFFTP--AAPRLFARGGFLHPRRRGFLPSQP 143
Query: 278 R 278
+
Sbjct: 144 Q 144
Score = 55.5 bits (132), Expect = 2e-07
Identities = 73/192 (38%), Positives = 76/192 (39%), Gaps = 61/192 (31%)
Query: 279 LIAPTAAGFCRHDFLSPPP---LLFAAAAFYSHRHGFLVPPPWLFALPQPWLFAPTAEAF 335
L AA F H + P LL F R GFL PPP P LFA + AF
Sbjct: 8 LFLSLAAHFLSHHTPAKPSCAGLLPHLHYFAPRRRGFL-PPPAASGFCPPRLFA--SAAF 64
Query: 336 CRCAAAAAFCPQSHSFLPSPPRLFAQPLQLFAPEATPFCPRHRGFLRHFTPRRCGFLPPP 395
C AAAAFCP PPRLFA R RGFL PRR FLP
Sbjct: 65 C-APAAAAFCPP-------PPRLFA--------------ARRRGFL----PRRRAFLP-- 96
Query: 396 QLLIPIAVAFCSHSFIPPPRLFGPTTTAFCPRHHGFWLLPLRLFAAAVFAPAAAAFCGFL 455
A AF + PPPRLF PR GF F A AP A GFL
Sbjct: 97 ------AAAF----YPPPPRLFAH------PRCRGF-------FTPA--APRLFARGGFL 131
Query: 456 PP--HSFLASPP 465
P FL S P
Sbjct: 132 HPRRRGFLPSQP 143
Score = 46.6 bits (109), Expect = 8e-05
Identities = 51/150 (34%), Positives = 58/150 (38%), Gaps = 20/150 (13%)
Query: 85 LFATAAAAFCPQHWGFLRLFDPPLGLFAAFCARRPAFLPPPLQLIPRLADFCPRCCSFFP 144
LF + AA F H L F RR FLPPP + FCP F
Sbjct: 8 LFLSLAAHFLSHHTPAKPSCAGLLPHLHYFAPRRRGFLPPPAA-----SGFCPP--RLFA 60
Query: 145 ASWISAPAPVAFRHRCCCFLPPPLRVSPATAYCPRCRGFL------PPPPWHFA-PITMA 197
++ APA AF C PP L + + PR R FL PPPP FA P
Sbjct: 61 SAAFCAPAAAAF-----CPPPPRLFAARRRGFLPRRRAFLPAAAFYPPPPRLFAHPRCRG 115
Query: 198 FCGFLPLRLFASEATAFCPWRHGFLALPPR 227
F RLFA P R GFL P+
Sbjct: 116 FFTPAAPRLFA-RGGFLHPRRRGFLPSQPQ 144
Score = 42.7 bits (99), Expect = 0.001
Identities = 30/72 (41%), Positives = 32/72 (44%), Gaps = 5/72 (6%)
Query: 604 FFAPCHHGFFPQPPRLFVFFLPPLPLLFAPASVAFYPPQCGFLSPPPRLSPTAAVAFCPC 663
+FAP GF P P F PP LFA A+ P F PPPRL F P
Sbjct: 36 YFAPRRRGFLPPPAASG--FCPPR--LFASAAFCA-PAAAAFCPPPPRLFAARRRGFLPR 90
Query: 664 CRAFLPPWLFVP 675
RAFLP F P
Sbjct: 91 RRAFLPAAAFYP 102
>gi|169194776 PREDICTED: similar to hCG1742442 [Homo sapiens]
Length = 242
Score = 60.1 bits (144), Expect = 7e-09
Identities = 58/153 (37%), Positives = 59/153 (38%), Gaps = 71/153 (46%)
Query: 260 PEATAFCPRRHGFFP---VPPRLIA------PTAAGFCRHDFLSPPPLLFAA-------- 302
P F RR GF P PPRL P AA FC PPP LFAA
Sbjct: 9 PHLHYFALRRRGFLPPPPAPPRLFTLRDFSPPVAAAFCH-----PPPWLFAARRRGFFPT 63
Query: 303 AAFYSHRHGFLVPPPWLFALPQPWLFAPTAEAFCRCAAAAAFCPQSHSFLPSPPRLFAQP 362
AAFY P P LFA P P LFAPTA PR FA+
Sbjct: 64 AAFYR-------PSPRLFAHPPPRLFAPTA-----------------------PRRFAR- 92
Query: 363 LQLFAPEATPFCPRHRGFLRHFTPRRCGFLPPP 395
RGFLR PRR GFLPPP
Sbjct: 93 ---------------RGFLR---PRRRGFLPPP 107
Score = 58.9 bits (141), Expect = 1e-08
Identities = 44/102 (43%), Positives = 46/102 (45%), Gaps = 13/102 (12%)
Query: 471 FLPRRRGFSPPPL---RLFAAAVFVP-AAAAFCPPAAAVAFCPRHYSFSLLQLFVPEATA 526
F RRRGF PPP RLF F P AAAFC P + R F + P
Sbjct: 14 FALRRRGFLPPPPAPPRLFTLRDFSPPVAAAFCHPPPWLFAARRRGFFPTAAFYRPSPRL 73
Query: 527 FCPHRCGILHPPPGLFAP-ASVTFCHRCFF-PRHYGILPPPP 566
F HPPP LFAP A F R F PR G LPPPP
Sbjct: 74 FA-------HPPPRLFAPTAPRRFARRGFLRPRRRGFLPPPP 108
Score = 52.4 bits (124), Expect = 1e-06
Identities = 44/124 (35%), Positives = 49/124 (39%), Gaps = 31/124 (25%)
Query: 372 PFCPRHRGFLRHFTPRRCGFLPPP----------QLLIPIAVAFCSHSFIPPPRLFGPTT 421
P C L +F RR GFLPPP P+A AFC PPP LF
Sbjct: 2 PSCAGLLPHLHYFALRRRGFLPPPPAPPRLFTLRDFSPPVAAAFCH----PPPWLFAARR 57
Query: 422 TAFCPRHHGFWLLPLRLFAAAVFAPAAAAFCGFLPPHSFLASPPWLFV--AFL-PRRRGF 478
F P AA + P+ F PP F + P F FL PRRRGF
Sbjct: 58 RGFFP-------------TAAFYRPSPRLF-AHPPPRLFAPTAPRRFARRGFLRPRRRGF 103
Query: 479 SPPP 482
PPP
Sbjct: 104 LPPP 107
Score = 50.1 bits (118), Expect = 7e-06
Identities = 44/124 (35%), Positives = 48/124 (38%), Gaps = 37/124 (29%)
Query: 73 FCRHRRGFLPPLLFATAAAAFCPQHWGFLRLFDPPLGLFAAFCARRPAFLPPPLQLIPRL 132
F RRGFLPP P LR F PP+ AAFC PPP
Sbjct: 14 FALRRRGFLPP--------PPAPPRLFTLRDFSPPVA--AAFCH------PPPWL----- 52
Query: 133 ADFCPRCCSFFPASWISAPAPVAFRHRCCCFLPPPLRVSPATA--------YCPRCRGFL 184
F R FFP + P+P F H PPP +P PR RGFL
Sbjct: 53 --FAARRRGFFPTAAFYRPSPRLFAH------PPPRLFAPTAPRRFARRGFLRPRRRGFL 104
Query: 185 PPPP 188
PPPP
Sbjct: 105 PPPP 108
Score = 50.1 bits (118), Expect = 7e-06
Identities = 48/140 (34%), Positives = 52/140 (37%), Gaps = 49/140 (35%)
Query: 179 RCRGFLPPPPWHFAPITMAFCGFLPLRLFASEATAFCPWRHGFLALPPRLFVAFCPHHYG 238
R RGFLPPPP P RLF + P + AFC
Sbjct: 17 RRRGFLPPPP-------------APPRLFTLRDFS------------PPVAAAFCHP--- 48
Query: 239 FLPPRLFASEAMGFLPPWFFAPEATAFCPRRHGFFPVPPRLIAPTA-AGFCRHDFLSPPP 297
PP LFA+ GF P A + P F PPRL APTA F R FL P
Sbjct: 49 --PPWLFAARRRGFFPT------AAFYRPSPRLFAHPPPRLFAPTAPRRFARRGFLRP-- 98
Query: 298 LLFAAAAFYSHRHGFLVPPP 317
R GFL PPP
Sbjct: 99 ----------RRRGFLPPPP 108
Score = 48.1 bits (113), Expect = 3e-05
Identities = 38/104 (36%), Positives = 44/104 (42%), Gaps = 8/104 (7%)
Query: 554 FFPRHYGILPPPP---RVFAAVAFFNRHCRSFLPPLPQSFASAAGAFRPCRCSFFAPCHH 610
F R G LPPPP R+F F +F P P FA+ F P +F+ P
Sbjct: 14 FALRRRGFLPPPPAPPRLFTLRDFSPPVAAAFCHPPPWLFAARRRGFFP-TAAFYRPSPR 72
Query: 611 GFFPQPPRLFVFFLPPLPLLFAPASVAFYPPQCGFLSPPPRLSP 654
F PPRLF P P FA P + GFL PPP P
Sbjct: 73 LFAHPPPRLFA---PTAPRRFARRGF-LRPRRRGFLPPPPTSQP 112
Score = 40.8 bits (94), Expect = 0.004
Identities = 38/104 (36%), Positives = 40/104 (38%), Gaps = 29/104 (27%)
Query: 163 FLPPPLRVSPATAYCPRCRGFLPP--------PPWHFAPITMAFCGFLPLRLFASEATAF 214
FLPPP PA R F PP PPW FA GF P F +
Sbjct: 21 FLPPP----PAPPRLFTLRDFSPPVAAAFCHPPPWLFAARRR---GFFPTAAF------Y 67
Query: 215 CPWRHGFLALPPRLFVAFCPHHY---GFLPPRLFASEAMGFLPP 255
P F PPRLF P + GFL PR GFLPP
Sbjct: 68 RPSPRLFAHPPPRLFAPTAPRRFARRGFLRPR-----RRGFLPP 106
Score = 37.7 bits (86), Expect = 0.036
Identities = 35/94 (37%), Positives = 40/94 (42%), Gaps = 27/94 (28%)
Query: 604 FFAPCHHGFFPQPP---RLFVF--FLPPL--------PLLFA-------PASVAFYPPQC 643
+FA GF P PP RLF F PP+ P LFA P + + P
Sbjct: 13 YFALRRRGFLPPPPAPPRLFTLRDFSPPVAAAFCHPPPWLFAARRRGFFPTAAFYRPSPR 72
Query: 644 GFLSPPPRL-SPTAAVAFC------PCCRAFLPP 670
F PPPRL +PTA F P R FLPP
Sbjct: 73 LFAHPPPRLFAPTAPRRFARRGFLRPRRRGFLPP 106
>gi|169190399 PREDICTED: similar to hCG1742442 [Homo sapiens]
Length = 242
Score = 60.1 bits (144), Expect = 7e-09
Identities = 58/153 (37%), Positives = 59/153 (38%), Gaps = 71/153 (46%)
Query: 260 PEATAFCPRRHGFFP---VPPRLIA------PTAAGFCRHDFLSPPPLLFAA-------- 302
P F RR GF P PPRL P AA FC PPP LFAA
Sbjct: 9 PHLHYFALRRRGFLPPPPAPPRLFTLRDFSPPVAAAFCH-----PPPWLFAARRRGFFPT 63
Query: 303 AAFYSHRHGFLVPPPWLFALPQPWLFAPTAEAFCRCAAAAAFCPQSHSFLPSPPRLFAQP 362
AAFY P P LFA P P LFAPTA PR FA+
Sbjct: 64 AAFYR-------PSPRLFAHPPPRLFAPTA-----------------------PRRFAR- 92
Query: 363 LQLFAPEATPFCPRHRGFLRHFTPRRCGFLPPP 395
RGFLR PRR GFLPPP
Sbjct: 93 ---------------RGFLR---PRRRGFLPPP 107
Score = 58.9 bits (141), Expect = 1e-08
Identities = 44/102 (43%), Positives = 46/102 (45%), Gaps = 13/102 (12%)
Query: 471 FLPRRRGFSPPPL---RLFAAAVFVP-AAAAFCPPAAAVAFCPRHYSFSLLQLFVPEATA 526
F RRRGF PPP RLF F P AAAFC P + R F + P
Sbjct: 14 FALRRRGFLPPPPAPPRLFTLRDFSPPVAAAFCHPPPWLFAARRRGFFPTAAFYRPSPRL 73
Query: 527 FCPHRCGILHPPPGLFAP-ASVTFCHRCFF-PRHYGILPPPP 566
F HPPP LFAP A F R F PR G LPPPP
Sbjct: 74 FA-------HPPPRLFAPTAPRRFARRGFLRPRRRGFLPPPP 108
Score = 52.4 bits (124), Expect = 1e-06
Identities = 44/124 (35%), Positives = 49/124 (39%), Gaps = 31/124 (25%)
Query: 372 PFCPRHRGFLRHFTPRRCGFLPPP----------QLLIPIAVAFCSHSFIPPPRLFGPTT 421
P C L +F RR GFLPPP P+A AFC PPP LF
Sbjct: 2 PSCAGLLPHLHYFALRRRGFLPPPPAPPRLFTLRDFSPPVAAAFCH----PPPWLFAARR 57
Query: 422 TAFCPRHHGFWLLPLRLFAAAVFAPAAAAFCGFLPPHSFLASPPWLFV--AFL-PRRRGF 478
F P AA + P+ F PP F + P F FL PRRRGF
Sbjct: 58 RGFFP-------------TAAFYRPSPRLF-AHPPPRLFAPTAPRRFARRGFLRPRRRGF 103
Query: 479 SPPP 482
PPP
Sbjct: 104 LPPP 107
Score = 50.1 bits (118), Expect = 7e-06
Identities = 44/124 (35%), Positives = 48/124 (38%), Gaps = 37/124 (29%)
Query: 73 FCRHRRGFLPPLLFATAAAAFCPQHWGFLRLFDPPLGLFAAFCARRPAFLPPPLQLIPRL 132
F RRGFLPP P LR F PP+ AAFC PPP
Sbjct: 14 FALRRRGFLPP--------PPAPPRLFTLRDFSPPVA--AAFCH------PPPWL----- 52
Query: 133 ADFCPRCCSFFPASWISAPAPVAFRHRCCCFLPPPLRVSPATA--------YCPRCRGFL 184
F R FFP + P+P F H PPP +P PR RGFL
Sbjct: 53 --FAARRRGFFPTAAFYRPSPRLFAH------PPPRLFAPTAPRRFARRGFLRPRRRGFL 104
Query: 185 PPPP 188
PPPP
Sbjct: 105 PPPP 108
Score = 50.1 bits (118), Expect = 7e-06
Identities = 48/140 (34%), Positives = 52/140 (37%), Gaps = 49/140 (35%)
Query: 179 RCRGFLPPPPWHFAPITMAFCGFLPLRLFASEATAFCPWRHGFLALPPRLFVAFCPHHYG 238
R RGFLPPPP P RLF + P + AFC
Sbjct: 17 RRRGFLPPPP-------------APPRLFTLRDFS------------PPVAAAFCHP--- 48
Query: 239 FLPPRLFASEAMGFLPPWFFAPEATAFCPRRHGFFPVPPRLIAPTA-AGFCRHDFLSPPP 297
PP LFA+ GF P A + P F PPRL APTA F R FL P
Sbjct: 49 --PPWLFAARRRGFFPT------AAFYRPSPRLFAHPPPRLFAPTAPRRFARRGFLRP-- 98
Query: 298 LLFAAAAFYSHRHGFLVPPP 317
R GFL PPP
Sbjct: 99 ----------RRRGFLPPPP 108
Score = 48.1 bits (113), Expect = 3e-05
Identities = 38/104 (36%), Positives = 44/104 (42%), Gaps = 8/104 (7%)
Query: 554 FFPRHYGILPPPP---RVFAAVAFFNRHCRSFLPPLPQSFASAAGAFRPCRCSFFAPCHH 610
F R G LPPPP R+F F +F P P FA+ F P +F+ P
Sbjct: 14 FALRRRGFLPPPPAPPRLFTLRDFSPPVAAAFCHPPPWLFAARRRGFFP-TAAFYRPSPR 72
Query: 611 GFFPQPPRLFVFFLPPLPLLFAPASVAFYPPQCGFLSPPPRLSP 654
F PPRLF P P FA P + GFL PPP P
Sbjct: 73 LFAHPPPRLFA---PTAPRRFARRGF-LRPRRRGFLPPPPTSQP 112
Score = 40.8 bits (94), Expect = 0.004
Identities = 38/104 (36%), Positives = 40/104 (38%), Gaps = 29/104 (27%)
Query: 163 FLPPPLRVSPATAYCPRCRGFLPP--------PPWHFAPITMAFCGFLPLRLFASEATAF 214
FLPPP PA R F PP PPW FA GF P F +
Sbjct: 21 FLPPP----PAPPRLFTLRDFSPPVAAAFCHPPPWLFAARRR---GFFPTAAF------Y 67
Query: 215 CPWRHGFLALPPRLFVAFCPHHY---GFLPPRLFASEAMGFLPP 255
P F PPRLF P + GFL PR GFLPP
Sbjct: 68 RPSPRLFAHPPPRLFAPTAPRRFARRGFLRPR-----RRGFLPP 106
Score = 37.7 bits (86), Expect = 0.036
Identities = 35/94 (37%), Positives = 40/94 (42%), Gaps = 27/94 (28%)
Query: 604 FFAPCHHGFFPQPP---RLFVF--FLPPL--------PLLFA-------PASVAFYPPQC 643
+FA GF P PP RLF F PP+ P LFA P + + P
Sbjct: 13 YFALRRRGFLPPPPAPPRLFTLRDFSPPVAAAFCHPPPWLFAARRRGFFPTAAFYRPSPR 72
Query: 644 GFLSPPPRL-SPTAAVAFC------PCCRAFLPP 670
F PPPRL +PTA F P R FLPP
Sbjct: 73 LFAHPPPRLFAPTAPRRFARRGFLRPRRRGFLPP 106
>gi|239755286 PREDICTED: similar to hCG1742442 [Homo sapiens]
Length = 296
Score = 59.7 bits (143), Expect = 9e-09
Identities = 58/153 (37%), Positives = 59/153 (38%), Gaps = 71/153 (46%)
Query: 260 PEATAFCPRRHGFFP---VPPRLIA------PTAAGFCRHDFLSPPPLLFAA-------- 302
P F RR GF P PPRL P AA FC PPP LFAA
Sbjct: 63 PHLHYFALRRRGFLPPPPXPPRLFTLRDFSPPVAAAFCH-----PPPWLFAARRRGFFPT 117
Query: 303 AAFYSHRHGFLVPPPWLFALPQPWLFAPTAEAFCRCAAAAAFCPQSHSFLPSPPRLFAQP 362
AAFY P P LFA P P LFAPTA PR FA+
Sbjct: 118 AAFYR-------PSPRLFAHPPPRLFAPTA-----------------------PRRFAR- 146
Query: 363 LQLFAPEATPFCPRHRGFLRHFTPRRCGFLPPP 395
RGFLR PRR GFLPPP
Sbjct: 147 ---------------RGFLR---PRRRGFLPPP 161
Score = 58.9 bits (141), Expect = 1e-08
Identities = 44/102 (43%), Positives = 46/102 (45%), Gaps = 13/102 (12%)
Query: 471 FLPRRRGFSPPPL---RLFAAAVFVP-AAAAFCPPAAAVAFCPRHYSFSLLQLFVPEATA 526
F RRRGF PPP RLF F P AAAFC P + R F + P
Sbjct: 68 FALRRRGFLPPPPXPPRLFTLRDFSPPVAAAFCHPPPWLFAARRRGFFPTAAFYRPSPRL 127
Query: 527 FCPHRCGILHPPPGLFAP-ASVTFCHRCFF-PRHYGILPPPP 566
F HPPP LFAP A F R F PR G LPPPP
Sbjct: 128 FA-------HPPPRLFAPTAPRRFARRGFLRPRRRGFLPPPP 162
Score = 53.5 bits (127), Expect = 6e-07
Identities = 45/126 (35%), Positives = 50/126 (39%), Gaps = 31/126 (24%)
Query: 370 ATPFCPRHRGFLRHFTPRRCGFLPPP----------QLLIPIAVAFCSHSFIPPPRLFGP 419
A P C L +F RR GFLPPP P+A AFC PPP LF
Sbjct: 54 AMPSCAGLLPHLHYFALRRRGFLPPPPXPPRLFTLRDFSPPVAAAFCH----PPPWLFAA 109
Query: 420 TTTAFCPRHHGFWLLPLRLFAAAVFAPAAAAFCGFLPPHSFLASPPWLFV--AFL-PRRR 476
F P AA + P+ F PP F + P F FL PRRR
Sbjct: 110 RRRGFFP-------------TAAFYRPSPRLF-AHPPPRLFAPTAPRRFARRGFLRPRRR 155
Query: 477 GFSPPP 482
GF PPP
Sbjct: 156 GFLPPP 161
Score = 50.1 bits (118), Expect = 7e-06
Identities = 48/140 (34%), Positives = 52/140 (37%), Gaps = 49/140 (35%)
Query: 179 RCRGFLPPPPWHFAPITMAFCGFLPLRLFASEATAFCPWRHGFLALPPRLFVAFCPHHYG 238
R RGFLPPPP P RLF + P + AFC
Sbjct: 71 RRRGFLPPPPX-------------PPRLFTLRDFS------------PPVAAAFCHP--- 102
Query: 239 FLPPRLFASEAMGFLPPWFFAPEATAFCPRRHGFFPVPPRLIAPTA-AGFCRHDFLSPPP 297
PP LFA+ GF P A + P F PPRL APTA F R FL P
Sbjct: 103 --PPWLFAARRRGFFPT------AAFYRPSPRLFAHPPPRLFAPTAPRRFARRGFLRP-- 152
Query: 298 LLFAAAAFYSHRHGFLVPPP 317
R GFL PPP
Sbjct: 153 ----------RRRGFLPPPP 162
Score = 49.7 bits (117), Expect = 9e-06
Identities = 44/124 (35%), Positives = 48/124 (38%), Gaps = 37/124 (29%)
Query: 73 FCRHRRGFLPPLLFATAAAAFCPQHWGFLRLFDPPLGLFAAFCARRPAFLPPPLQLIPRL 132
F RRGFLPP P LR F PP+ AAFC PPP
Sbjct: 68 FALRRRGFLPP--------PPXPPRLFTLRDFSPPVA--AAFCH------PPPWL----- 106
Query: 133 ADFCPRCCSFFPASWISAPAPVAFRHRCCCFLPPPLRVSPATA--------YCPRCRGFL 184
F R FFP + P+P F H PPP +P PR RGFL
Sbjct: 107 --FAARRRGFFPTAAFYRPSPRLFAH------PPPRLFAPTAPRRFARRGFLRPRRRGFL 158
Query: 185 PPPP 188
PPPP
Sbjct: 159 PPPP 162
Score = 48.1 bits (113), Expect = 3e-05
Identities = 38/104 (36%), Positives = 44/104 (42%), Gaps = 8/104 (7%)
Query: 554 FFPRHYGILPPPP---RVFAAVAFFNRHCRSFLPPLPQSFASAAGAFRPCRCSFFAPCHH 610
F R G LPPPP R+F F +F P P FA+ F P +F+ P
Sbjct: 68 FALRRRGFLPPPPXPPRLFTLRDFSPPVAAAFCHPPPWLFAARRRGFFP-TAAFYRPSPR 126
Query: 611 GFFPQPPRLFVFFLPPLPLLFAPASVAFYPPQCGFLSPPPRLSP 654
F PPRLF P P FA P + GFL PPP P
Sbjct: 127 LFAHPPPRLFA---PTAPRRFARRGF-LRPRRRGFLPPPPTSQP 166
Score = 37.7 bits (86), Expect = 0.036
Identities = 35/94 (37%), Positives = 40/94 (42%), Gaps = 27/94 (28%)
Query: 604 FFAPCHHGFFPQPP---RLFVF--FLPPL--------PLLFA-------PASVAFYPPQC 643
+FA GF P PP RLF F PP+ P LFA P + + P
Sbjct: 67 YFALRRRGFLPPPPXPPRLFTLRDFSPPVAAAFCHPPPWLFAARRRGFFPTAAFYRPSPR 126
Query: 644 GFLSPPPRL-SPTAAVAFC------PCCRAFLPP 670
F PPPRL +PTA F P R FLPP
Sbjct: 127 LFAHPPPRLFAPTAPRRFARRGFLRPRRRGFLPP 160
>gi|169217390 PREDICTED: similar to hCG1742442 [Homo sapiens]
Length = 205
Score = 39.7 bits (91), Expect = 0.009
Identities = 27/62 (43%), Positives = 27/62 (43%), Gaps = 13/62 (20%)
Query: 368 PEATPFCPRHRGFLRHFTPRRCGFLPPPQLLIPIAVAFCSHSFIPPPRLFGPTTTAFCPR 427
P F R RGFL PRR GFLPP AFC P PRLF P F P
Sbjct: 9 PHLHYFALRLRGFL---PPRRHGFLPPE------VAAFCP----PSPRLFAPRRRGFLPH 55
Query: 428 HH 429
H
Sbjct: 56 GH 57
Score = 37.7 bits (86), Expect = 0.036
Identities = 26/61 (42%), Positives = 26/61 (42%), Gaps = 11/61 (18%)
Query: 234 PHHYGFLPP-RLFASEAMGFLPP---WFFAPEATAFCPRRHGFFPVPPRLIAPTAAGFCR 289
P G LP FA GFLPP F PE AFCP PRL AP GF
Sbjct: 2 PSCAGLLPHLHYFALRLRGFLPPRRHGFLPPEVAAFCPPS-------PRLFAPRRRGFLP 54
Query: 290 H 290
H
Sbjct: 55 H 55
Score = 32.0 bits (71), Expect = 2.0
Identities = 33/125 (26%), Positives = 45/125 (36%), Gaps = 32/125 (25%)
Query: 473 PRRRGFSPPPLRLFAAAVFVPAAAAFCPPAAAVAFCPRHYSFSLLQLFVPEATAFCPHRC 532
PRR GF PP + AAFCPP+ PR LF P F PH
Sbjct: 24 PRRHGFLPPEV------------AAFCPPS------PR--------LFAPRRRGFLPHG- 56
Query: 533 GILHPPPGLFAPASVTFCHRCFFPRHYGILPPPPRVFAAVAFF--NRHCRSFLPPLPQSF 590
HP + A T C H + P ++ + F+ C + P S
Sbjct: 57 ---HPQKREWNRAGHTRCRSQPQSGHSTDVRAPTQLLGLLVFWLPGVRCDIQMTQSPSSL 113
Query: 591 ASAAG 595
+++ G
Sbjct: 114 SASVG 118
Score = 30.4 bits (67), Expect = 5.7
Identities = 16/37 (43%), Positives = 16/37 (43%), Gaps = 3/37 (8%)
Query: 604 FFAPCHHGFFPQPPRLFVFFLPPLPLLFAPASVAFYP 640
F P HGF P F PP P LFAP F P
Sbjct: 21 FLPPRRHGFLPPE---VAAFCPPSPRLFAPRRRGFLP 54
Score = 30.4 bits (67), Expect = 5.7
Identities = 17/43 (39%), Positives = 21/43 (48%), Gaps = 6/43 (13%)
Query: 346 PQSHSFLPSPPRLFAQPLQLFAPEATPFCPRHRGFLRHFTPRR 388
P+ H FLP F P +P F PR RGFL H P++
Sbjct: 24 PRRHGFLPPEVAAFCPP----SPRL--FAPRRRGFLPHGHPQK 60
Score = 30.0 bits (66), Expect = 7.4
Identities = 20/42 (47%), Positives = 21/42 (50%), Gaps = 2/42 (4%)
Query: 179 RCRGFLPPPPWHFAPITM-AFCGFLPLRLFASEATAFCPWRH 219
R RGFLPP F P + AFC P RLFA F P H
Sbjct: 17 RLRGFLPPRRHGFLPPEVAAFCPPSP-RLFAPRRRGFLPHGH 57
Score = 30.0 bits (66), Expect = 7.4
Identities = 14/27 (51%), Positives = 14/27 (51%)
Query: 309 RHGFLVPPPWLFALPQPWLFAPTAEAF 335
RHGFL P F P P LFAP F
Sbjct: 26 RHGFLPPEVAAFCPPSPRLFAPRRRGF 52
>gi|169217347 PREDICTED: similar to hCG1742442 [Homo sapiens]
Length = 205
Score = 39.7 bits (91), Expect = 0.009
Identities = 27/62 (43%), Positives = 27/62 (43%), Gaps = 13/62 (20%)
Query: 368 PEATPFCPRHRGFLRHFTPRRCGFLPPPQLLIPIAVAFCSHSFIPPPRLFGPTTTAFCPR 427
P F R RGFL PRR GFLPP AFC P PRLF P F P
Sbjct: 9 PHLHYFALRLRGFL---PPRRHGFLPPE------VAAFCP----PSPRLFAPRRRGFLPH 55
Query: 428 HH 429
H
Sbjct: 56 GH 57
Score = 37.7 bits (86), Expect = 0.036
Identities = 26/61 (42%), Positives = 26/61 (42%), Gaps = 11/61 (18%)
Query: 234 PHHYGFLPP-RLFASEAMGFLPP---WFFAPEATAFCPRRHGFFPVPPRLIAPTAAGFCR 289
P G LP FA GFLPP F PE AFCP PRL AP GF
Sbjct: 2 PSCAGLLPHLHYFALRLRGFLPPRRHGFLPPEVAAFCPPS-------PRLFAPRRRGFLP 54
Query: 290 H 290
H
Sbjct: 55 H 55
Score = 32.0 bits (71), Expect = 2.0
Identities = 33/125 (26%), Positives = 45/125 (36%), Gaps = 32/125 (25%)
Query: 473 PRRRGFSPPPLRLFAAAVFVPAAAAFCPPAAAVAFCPRHYSFSLLQLFVPEATAFCPHRC 532
PRR GF PP + AAFCPP+ PR LF P F PH
Sbjct: 24 PRRHGFLPPEV------------AAFCPPS------PR--------LFAPRRRGFLPHG- 56
Query: 533 GILHPPPGLFAPASVTFCHRCFFPRHYGILPPPPRVFAAVAFF--NRHCRSFLPPLPQSF 590
HP + A T C H + P ++ + F+ C + P S
Sbjct: 57 ---HPQKREWNRAGHTRCRSQPQSGHSTDVRAPTQLLGLLVFWLPGVRCDIQMTQSPSSL 113
Query: 591 ASAAG 595
+++ G
Sbjct: 114 SASVG 118
Score = 30.4 bits (67), Expect = 5.7
Identities = 16/37 (43%), Positives = 16/37 (43%), Gaps = 3/37 (8%)
Query: 604 FFAPCHHGFFPQPPRLFVFFLPPLPLLFAPASVAFYP 640
F P HGF P F PP P LFAP F P
Sbjct: 21 FLPPRRHGFLPPE---VAAFCPPSPRLFAPRRRGFLP 54
Score = 30.4 bits (67), Expect = 5.7
Identities = 17/43 (39%), Positives = 21/43 (48%), Gaps = 6/43 (13%)
Query: 346 PQSHSFLPSPPRLFAQPLQLFAPEATPFCPRHRGFLRHFTPRR 388
P+ H FLP F P +P F PR RGFL H P++
Sbjct: 24 PRRHGFLPPEVAAFCPP----SPRL--FAPRRRGFLPHGHPQK 60
Score = 30.0 bits (66), Expect = 7.4
Identities = 20/42 (47%), Positives = 21/42 (50%), Gaps = 2/42 (4%)
Query: 179 RCRGFLPPPPWHFAPITM-AFCGFLPLRLFASEATAFCPWRH 219
R RGFLPP F P + AFC P RLFA F P H
Sbjct: 17 RLRGFLPPRRHGFLPPEVAAFCPPSP-RLFAPRRRGFLPHGH 57
Score = 30.0 bits (66), Expect = 7.4
Identities = 14/27 (51%), Positives = 14/27 (51%)
Query: 309 RHGFLVPPPWLFALPQPWLFAPTAEAF 335
RHGFL P F P P LFAP F
Sbjct: 26 RHGFLPPEVAAFCPPSPRLFAPRRRGF 52
>gi|24308073 protein tyrosine phosphatase, non-receptor type 23 [Homo
sapiens]
Length = 1636
Score = 38.5 bits (88), Expect = 0.021
Identities = 64/256 (25%), Positives = 84/256 (32%), Gaps = 54/256 (21%)
Query: 413 PPRLFGPTTTAFCPRHHGFWLLPLRLFAAAVFAPAAAAFCGFLP---PHSFLASPPWLFV 469
PP + T PR G +P+ A APA G +P P + S P++ V
Sbjct: 792 PPGTYSGPTQLIQPRAPGPHAMPVAPGPALYPAPAYTPELGLVPRSSPQHGVVSSPYVGV 851
Query: 470 AFLPRRRGF--SPPPLRLFAAAVFVPAAAAFCPPAAAVAFCPRHYSFSLLQLFVPEATAF 527
P G +PPP F P A+A P + +Q +P TA
Sbjct: 852 GPAPPVAGLPSAPPP--------------QFSGPELAMAVRPATTTVDSIQAPIPSHTAP 897
Query: 528 CPHRCGILHPPPGLFAPASVTFCHRCFFPRHYGILPPPPRVFAAVAFFNRHCRSFLPPLP 587
P+ PPP F PPP+ + + +P
Sbjct: 898 RPNPTPA--PPPPCFPV-------------------PPPQPLPTPYTYPAGAKQPIPA-Q 935
Query: 588 QSFASAAGAFRPCRCSFFAPCHH-------GFFPQPPRLFV------FFLPPLPLLFAPA 634
F+S A P P H F PQPP+ + F P P L P
Sbjct: 936 HHFSSGIPAGFPAPRIGPQPQPHPQPHPSQAFGPQPPQQPLPLQHPHLFPPQAPGLLPPQ 995
Query: 635 SVAFYPPQCGFLSPPP 650
S Y PQ G L PP
Sbjct: 996 SPYPYAPQPGVLGQPP 1011
Score = 30.0 bits (66), Expect = 7.4
Identities = 100/402 (24%), Positives = 124/402 (30%), Gaps = 100/402 (24%)
Query: 122 LPPPLQLIPRLAD----------FCPRCCSFFPASWISAPAPVAFRHRCCCFLPPPLRVS 171
LPP + PRL D F P S FP+S + P P H LPP
Sbjct: 748 LPPDMVAGPRLPDTFLGSATPLHFPP---SPFPSS--TGPGP----HYLSGPLPPGTYSG 798
Query: 172 PATAYCPRCRG-----FLPPPPWHFAPITMAFCGFLPLRLFASEATAFCPWRHGFLALPP 226
P PR G P P + AP G +P R P+ G PP
Sbjct: 799 PTQLIQPRAPGPHAMPVAPGPALYPAPAYTPELGLVP-RSSPQHGVVSSPYV-GVGPAPP 856
Query: 227 RLFVAFCPHHYGFLPPRLFASE-AMGFLPPW-----FFAPEATAFCPRRHGF-------F 273
+ P PP+ E AM P AP + PR + F
Sbjct: 857 VAGLPSAP------PPQFSGPELAMAVRPATTTVDSIQAPIPSHTAPRPNPTPAPPPPCF 910
Query: 274 PVPPRLIAPTAAGF---------CRHDFLSPPPLLFAAAAF------YSHRHGFLV---- 314
PVPP PT + +H F S P F A + H
Sbjct: 911 PVPPPQPLPTPYTYPAGAKQPIPAQHHFSSGIPAGFPAPRIGPQPQPHPQPHPSQAFGPQ 970
Query: 315 PPPWLFALPQPWLFAPTAEAFCRCAAAAAFCPQSHSFLPSPPRLFAQPLQLFAPEATPFC 374
PP L P LF P A + + PQ PP L QL+ A
Sbjct: 971 PPQQPLPLQHPHLFPPQAPGLLPPQSPYPYAPQPGVLGQPPPPLHT---QLYPGPAQDPL 1027
Query: 375 PRHRGFLRHFTPRRCGFLPPPQLLIPIAVAFCSHSFIPPPRLFGPTTTAFCPRHHGFWLL 434
P H G L +P G PP PP +GP + R G
Sbjct: 1028 PAHSGALPFPSP---GPPQPPH----------------PPLAYGPAPST---RPMGPQAA 1065
Query: 435 PLRLFAAA-----------VFAPAAAAFCGFLPPHSFLASPP 465
PL + + V +PA + G +PP A PP
Sbjct: 1066 PLTIRGPSSAGQSTPSPHLVPSPAPSPGPGPVPPRPPAAEPP 1107
>gi|4505939 DNA-directed RNA polymerase II A [Homo sapiens]
Length = 1970
Score = 38.1 bits (87), Expect = 0.027
Identities = 86/456 (18%), Positives = 163/456 (35%), Gaps = 56/456 (12%)
Query: 213 AFCPWRHG----FLALPPRLFVAFCPHHYGFLPPRLFASEAMGFLPPWFFAPEATAFCPR 268
A PW G + A P + P GF P AS+A GF P + A T P
Sbjct: 1516 AMTPWNQGATPAYGAWSPSVGSGMTPGAAGFSPSA--ASDASGFSPGYSPAWSPTPGSPG 1573
Query: 269 RHGFFPVPPRLIAPTAAGFCRHDFLSPPPLLFAAAAFYSHRHGFLVPPPWLFALPQPWLF 328
G P P + +P A + SP A+ G P ++ P +
Sbjct: 1574 SPG--PSSPYIPSPGGAMSPSYSPTSP--------AYEPRSPGGYTPQSPSYSPTSP-SY 1622
Query: 329 APTAEAFCRCAAAAAFCPQSHSFLPSPPRLFAQPLQLFAPEATPFCPRHRGFLRHFTPRR 388
+PT+ ++ + + P S S+ P+ P +P +P P + ++P
Sbjct: 1623 SPTSPSYS--PTSPNYSPTSPSYSPTSPSYSPT-----SPSYSPTSPSYSPTSPSYSPTS 1675
Query: 389 CGFLPPPQLLIPIAVAFC--SHSFIPPPRLFGPTTTAFCPRHHGFWLLPLRLFAAAVFAP 446
+ P P + ++ S S+ P + PT+ ++ P + ++P
Sbjct: 1676 PSYSPTSPSYSPTSPSYSPTSPSYSPTSPSYSPTSPSYSP-------------TSPSYSP 1722
Query: 447 AAAAFCGFLPPHSFLASPPWLFVAFLPRRRGFSPP-PLRLFAAAVFVPAAAAFCPPAAAV 505
+ ++ P +S SP ++ P +SP P + + P + ++ P +
Sbjct: 1723 TSPSYSPTSPSYS-PTSP-----SYSPTSPNYSPTSPNYTPTSPSYSPTSPSYSPTSPNY 1776
Query: 506 AFCPRHYSFSLLQLFVPEATAFCPHRCGILHPPPGLFAPASVTFCHRC--FFPRHYGILP 563
+YS + P + ++ P P + P S T+ + P P
Sbjct: 1777 TPTSPNYS-PTSPSYSPTSPSYSPTSPSY-SPSSPRYTPQSPTYTPSSPSYSPSSPSYSP 1834
Query: 564 PPPRVFAAVAFFNRHCRSFLPPLPQSFASAAGAFRPCRCSFFAPCHHGFFPQPPRLFVF- 622
P+ ++ + P P+ ++ + + P + +P + P P+
Sbjct: 1835 TSPKYTPTSPSYSPSSPEYTPTSPK-YSPTSPKYSPTSPKY-SPTSPTYSPTTPKYSPTS 1892
Query: 623 --FLPPLPLLFAPASVAFYPPQCGFLSPPPRLSPTA 656
+ P P+ + P S + P + P+ SPT+
Sbjct: 1893 PTYSPTSPV-YTPTSPKYSPTSPTYSPTSPKYSPTS 1927
>gi|239757130 PREDICTED: hypothetical protein FLJ22184 [Homo
sapiens]
Length = 855
Score = 37.7 bits (86), Expect = 0.036
Identities = 108/429 (25%), Positives = 139/429 (32%), Gaps = 101/429 (23%)
Query: 241 PPRLFASEAMGFLPPWFFAPEATAFCPRRHGFFPVPPRLIAPTAAGFCRHDFLSPPPLLF 300
PPR A+ A+G P +P AT P PP L A + +P PL
Sbjct: 287 PPRKDAAPALG---PLSSSPLATP-SPSAALQSQAPPTLPATPHSSSLTCQLATPLPLAP 342
Query: 301 AAAAFYSHRHGFLVPPPWLFALPQPWLFAPTAEAFCRCAAAAAFCPQSHSFLPSPPRLFA 360
+ + PP L LP P P+ + + +HSFLPSPP
Sbjct: 343 PSPS----------APPSLQTLPSPPATPPSQAT---TSLGSPTLQATHSFLPSPP---- 385
Query: 361 QPLQLFAPEATPFCPRHRGFLRHFTPRRCGFLPPPQLLIPIAVAFCSHSFIPPPRLFGPT 420
+P AT PPPQ P A+A P P P
Sbjct: 386 -----LSPLAT---------------------PPPQ--APPALALPPLQAPPSPPASPPL 417
Query: 421 TTAFCPRHHGFWLLPLRLFAAAVFAPAAAAF-CGFLPPHSFLASPPWLFVAFLPRRR--G 477
+ P L + L A P + F PP ASPP A P +
Sbjct: 418 SPLATPSPQAPNALAVHLLQAPFSPPPSPPVQAPFSPP----ASPPVSPSATPPSQAPPS 473
Query: 478 FSPPPLRLFAAAVFVPAAAAFCPPAAAVAFCPRHYSFSLLQLF-----VPEATAFCPHRC 532
+ PPL++ + PA+ P A P + LQL P A A P +
Sbjct: 474 LAAPPLQVPPSP---PASPPMSPSATPPPQAPPPLAAPPLQLAKPPPQAPPALATPPLQA 530
Query: 533 GILHPPPGLFAPASVTFCHRCFFPRHYGILPPP--PRVFAAVAFFNRHCRSFLPPLPQSF 590
L PP F P F P PPP P V AA +PP P +
Sbjct: 531 --LPSPPASF-PGQAPFSPSASLPMSPLATPPPQAPPVLAAPLL-------QVPPSPPAS 580
Query: 591 ASAAGAFRPCRCSFFAPCHHGFFPQPPRLFVFFLPPLPLLFAPASVAFYPPQCGFLSPPP 650
+ RP P P P L L AP PP PPP
Sbjct: 581 PTLQAPRRP--------------PTPGPDTSVSGPRLTLALAPG-----PP------PPP 615
Query: 651 RLSPTAAVA 659
SP++ ++
Sbjct: 616 SRSPSSTLS 624
>gi|153946391 N-methyl-D-aspartate receptor subunit 2D precursor [Homo
sapiens]
Length = 1336
Score = 37.4 bits (85), Expect = 0.047
Identities = 72/254 (28%), Positives = 88/254 (34%), Gaps = 71/254 (27%)
Query: 220 GFLALPPRLFVAFCPHHYGFLPPRLFASE--------AMGFLPPWFFA----PEATAFCP 267
G A PP A P Y L P SE ++G L PW+FA P A P
Sbjct: 1088 GAPAAPPPCRAAPPPCPYLDLEPSPSDSEDSESLGGASLGGLEPWWFADFPYPYAERLGP 1147
Query: 268 RRHGFFPV--------------PPRLIAPTAAGFCRH----DFLSPPPLLFAAAAFYSHR 309
++ V PPR + AA CRH + L PP L + +
Sbjct: 1148 PPGRYWSVDKLGGWRAGSWDYLPPR--SGPAAWHCRHCASLELLPPPRHL--SCSHDGLD 1203
Query: 310 HGFLVPPPWLFALPQPWLFAPTAEAFCRCAAAAAFCPQSHSFLPSPPRLFAQPLQLFAPE 369
G+ PPP PW P RC CP+SH P PR A
Sbjct: 1204 GGWWAPPP------PPWAAGPLPRRRARCG-----CPRSH---PHRPR---------ASH 1240
Query: 370 ATP--FCPRHRGFLRHFTPRRCGFLPPPQLLIPIA-----VAFCSHSFIPPPRLFGPTTT 422
TP P H RH LPPP P + ++ C + P RL GP+
Sbjct: 1241 RTPAAAAPHHH---RHRRAAGGWDLPPP---APTSRSLEDLSSCPRA-APARRLTGPSRH 1293
Query: 423 AFCPRHHGFWLLPL 436
A H W PL
Sbjct: 1294 ARRCPHAAHWGPPL 1307
>gi|4758392 forkhead box D1 [Homo sapiens]
Length = 465
Score = 37.4 bits (85), Expect = 0.047
Identities = 45/149 (30%), Positives = 51/149 (34%), Gaps = 33/149 (22%)
Query: 470 AFLPRRRGFSPPPLRLFAAAVFVP--------AAAAFCPPAAAVAFCPRHYSFSLLQLFV 521
+FL RR+ F PL AA A A P AAA F P
Sbjct: 213 SFLRRRKRFKRQPLLPPNAAAAESLLLRGAGAAGGAGDPAAAAALFPPAPPP-------P 265
Query: 522 PEATAFCPHRCGI------LHPPPGLFAPASVTFCHRCFFPRHYGILPPPPRVFAAVAFF 575
P A + P+ CG PP LFA A+ F P PPPP A A
Sbjct: 266 PHAYGYGPYGCGYGLQLPPYAPPSALFAAAAAAAAAAAFHPHS---PPPPPPPHGAAAEL 322
Query: 576 NRHCRSFLP---------PLPQSFASAAG 595
R + P PLP S A A G
Sbjct: 323 ARTAFGYRPHPLGAALPGPLPASAAKAGG 351
Score = 33.1 bits (74), Expect = 0.88
Identities = 38/106 (35%), Positives = 45/106 (42%), Gaps = 16/106 (15%)
Query: 412 PPPRLFGPTTTAFCPRHHGFWLL------PLRLFAAAVFAPAAAAFCGFLPPHSFLASPP 465
PPP +G + P G+ L P LFAAA A AAAAF PP PP
Sbjct: 264 PPPHAYG-----YGPYGCGYGLQLPPYAPPSALFAAAAAAAAAAAFHPHSPPP---PPPP 315
Query: 466 WLFVAFLPRRR-GFSPPPL-RLFAAAVFVPAAAAFCPPAAAVAFCP 509
A L R G+ P PL + AA A P A+A+A P
Sbjct: 316 HGAAAELARTAFGYRPHPLGAALPGPLPASAAKAGGPGASALARSP 361
Score = 30.4 bits (67), Expect = 5.7
Identities = 33/110 (30%), Positives = 41/110 (37%), Gaps = 32/110 (29%)
Query: 440 AAAVFAPAAAAFCGFLPPHSF----------LASPPWLFVAFLPRRRGFSPPPLRLFAAA 489
AAA+F PA PPH++ L PP+ PP LFAAA
Sbjct: 254 AAALFPPAPPP-----PPHAYGYGPYGCGYGLQLPPYA-------------PPSALFAAA 295
Query: 490 VFVPAAAAFCPPAAAVAFCPRHYSFSLLQLFVPEATAFCPHRCGILHPPP 539
AAAAF P + P + L + A + PH G P P
Sbjct: 296 AAAAAAAAFHPHSPPPPPPPHGAAAELAR----TAFGYRPHPLGAALPGP 341
>gi|11386183 WAS protein family, member 2 [Homo sapiens]
Length = 498
Score = 37.0 bits (84), Expect = 0.061
Identities = 36/127 (28%), Positives = 46/127 (36%), Gaps = 32/127 (25%)
Query: 563 PPPPRVFAAVAFFNRHCRSFLPPLPQSFA------SAAGAFRPCRCSFFAPCHH------ 610
PPPP+ +A + LPP P F+ +G P R S +P H
Sbjct: 247 PPPPQSDSASSPSPSFSEDNLPPPPAEFSYPVDNQRGSGLAGPKRSSVVSPSHPPPAPPL 306
Query: 611 --------GFFPQP------PRLFVFFLPPLPLLFA------PASVAFYPPQCGFLSPPP 650
GF P P P + PP P+ F P S +PP F +PPP
Sbjct: 307 GSPPGPKPGFAPPPAPPPPPPPMIGIPPPPPPVGFGSPGTPPPPSPPSFPPHPDFAAPPP 366
Query: 651 RLSPTAA 657
P AA
Sbjct: 367 PPPPPAA 373
>gi|209180481 Cas-Br-M (murine) ecotropic retroviral transforming
sequence-like 1 [Homo sapiens]
Length = 491
Score = 37.0 bits (84), Expect = 0.061
Identities = 76/328 (23%), Positives = 108/328 (32%), Gaps = 85/328 (25%)
Query: 254 PPWFFAPEATAFCPRRHGFFPVPPRLIAPTAAGFCRHDFLSPPPLLFAAAAFYSHRHGFL 313
PP PE P +H +PP+ +H + PPPL Y+ H +
Sbjct: 211 PPPTEIPERFIMPPDKHHMSHIPPK----------QHIMMPPPPLQHVPHEHYNQPHEDI 260
Query: 314 VPPPWLFALPQPWLFAPTAEAFCRCAAAAAFCPQSHSFLPSPP-----RLFAQPLQLFAP 368
PP ++ P + + E F + HS L + P A+ AP
Sbjct: 261 RAPPAELSMAPPPPRSVSQETF-------RISTRKHSNLITVPIQDDSNSGAREPPPPAP 313
Query: 369 EATPFCPRHRG-----FLRHFTPRRCGFLPPPQLLIPIAVAFCSHSFIPPPRLFGPTTTA 423
P ++G H P + + PPP PI SH PP+ G
Sbjct: 314 APAHHHPEYQGQPVVSHPHHIMPPQQHYAPPPPPPPPI-----SHPMPHPPQAAG----- 363
Query: 424 FCPRHHGFWLLPLRLFAAAVFAPAAAAFCGFLPPHSFLASPPWLFVAFLPRRRGFSPPPL 483
P +++ A P +A PP + PP +A +P PP
Sbjct: 364 ----------TPHLVYSQAPPPPMTSA-----PPP--ITPPPGHIIAQMPPYMNHPPPG- 405
Query: 484 RLFAAAVFVPAAAAFCPPAAAVAFCPRHYSFSLLQLFVPEATAFCPHRCGILHPP---PG 540
P PP A P HY+ + L F + G L PP PG
Sbjct: 406 --------PPPPQHGGPPVTAPP--PHHYNPNSLPQFTEDQ--------GTLSPPFTQPG 447
Query: 541 LFAPASVTFCHRCFFPRHYGILPPPPRV 568
+P +P G PPPPR+
Sbjct: 448 GMSPG--------IWPAPRG-PPPPPRL 466
>gi|150417989 cyclin K isoform 1 [Homo sapiens]
Length = 580
Score = 37.0 bits (84), Expect = 0.061
Identities = 39/134 (29%), Positives = 53/134 (39%), Gaps = 25/134 (18%)
Query: 563 PPPPRVF-----AAVAFFNRHCRSFLPPLPQSFASAAGAFRPCRCSFFAPCH-----HGF 612
PPPP + ++ + L + ++ + GA P ++ P H H +
Sbjct: 422 PPPPSSYMTGMSTTSSYMSGEGYQSLQSMMKTEGPSYGALPP---AYGPPAHLPYHPHVY 478
Query: 613 FPQPPRLFVFFLPPLPLLFAPASVA----FYPP-----QCGFLSPPPRLSPTAAVAFCPC 663
P PP V PP P F P ++ YPP F PPPRL PT AV P
Sbjct: 479 PPNPPPPPV---PPPPASFPPPAIPPPTPGYPPPPPTYNPNFPPPPPRLPPTHAVPPHPP 535
Query: 664 CRAFLPPWLFVPAA 677
LPP + P A
Sbjct: 536 PGLGLPPASYPPPA 549
Score = 35.0 bits (79), Expect = 0.23
Identities = 36/120 (30%), Positives = 40/120 (33%), Gaps = 26/120 (21%)
Query: 537 PPPGLFAPASVTFCHRCFFPRHYGILPPPPRVFAAVAFFNRHCRSFLPPLPQSFASAAGA 596
P G PA H + P Y PPPP V PP P SF A
Sbjct: 456 PSYGALPPAYGPPAHLPYHPHVYPPNPPPPPV---------------PPPPASFPPPA-- 498
Query: 597 FRPCRCSFFAPCHHGFFPQPPRLFVFFLPPLPLLFAPASVAFYPPQCGFLSPPPRLSPTA 656
P G+ P PP F PP P L +V +PP G PP P A
Sbjct: 499 --------IPPPTPGYPPPPPTYNPNFPPPPPRLPPTHAVPPHPPP-GLGLPPASYPPPA 549
Score = 30.4 bits (67), Expect = 5.7
Identities = 33/125 (26%), Positives = 40/125 (32%), Gaps = 35/125 (28%)
Query: 251 GFLPPWFFAPEATAFCPRRHGFFPVPPRLIAPTAAGFCRHDFLSPPPLLFAAAAFYSHRH 310
G LPP + P + P H + P PP P PPP F A
Sbjct: 459 GALPPAYGPPAHLPYHP--HVYPPNPPPPPVP------------PPPASFPPPAIPPPTP 504
Query: 311 GFLVPPPWL---FALPQPWLFAPTAEAFCRCAAAAAFCPQSHSFLPSPPRLFAQPLQLFA 367
G+ PPP F P P L P +H+ P PP P +
Sbjct: 505 GYPPPPPTYNPNFPPPPPRL------------------PPTHAVPPHPPPGLGLPPASYP 546
Query: 368 PEATP 372
P A P
Sbjct: 547 PPAVP 551
>gi|210032509 hypothetical protein LOC100130302 [Homo sapiens]
Length = 887
Score = 36.6 bits (83), Expect = 0.079
Identities = 41/129 (31%), Positives = 53/129 (41%), Gaps = 16/129 (12%)
Query: 412 PPPRLFGPTTT-------AFCPRHHGFWLLPLR--LFAAAVFAPAAAAFCGFLPPHSFLA 462
PPPR P+++ +F P+ G PL+ AAA A AAAA + A
Sbjct: 461 PPPRTQLPSSSGKISSGNSFPPQQAGS---PLKRPFSAAAAIAAAAAAAAAAAAAAAAAA 517
Query: 463 SPPWLFVAFLPRRRGFSPPPLRLFAAAVFVPAA--AAFCPPAAAVAFCPRHYSFSLLQLF 520
P L A P + P L AA PAA A PAAA + P H + L
Sbjct: 518 PAPALAAAAAPALAAAAAPALAAAAAPAPAPAAAPAVAAAPAAAASAAPSHSQKPSVPLI 577
Query: 521 VPEATAFCP 529
+A+ CP
Sbjct: 578 --QASRPCP 584
>gi|13540521 basic helix-loop-helix domain containing, class B, 3
[Homo sapiens]
Length = 482
Score = 36.2 bits (82), Expect = 0.10
Identities = 43/138 (31%), Positives = 55/138 (39%), Gaps = 12/138 (8%)
Query: 440 AAAVFAPAAAAFCGFLPPHSFLASPPWLFVAFLPRRRGFSPPPLRLFAAAVFVPAAAAFC 499
AAA+ P AA L P + L S VAF G +P P AAA F F
Sbjct: 301 AAALLGPDPAAAAALLRPDAALLSS---LVAF--GGGGGAPFPQPAAAAAPFC-LPFCFL 354
Query: 500 PPAAAVAFCPRHYSFSLLQLFVPEATAFCPHRCGILHP----PPGLFAPASVTFCHRCFF 555
P+AA A+ S L+ ++ A A P +L+P P A A+ F
Sbjct: 355 SPSAAAAYVQPFLDKSGLEKYLYPAAAAAPFP--LLYPGIPAPAAAAAAAAAAAAAAAAF 412
Query: 556 PRHYGILPPPPRVFAAVA 573
P +L PPP A A
Sbjct: 413 PCLSSVLSPPPEKAGAAA 430
Score = 33.1 bits (74), Expect = 0.88
Identities = 38/118 (32%), Positives = 43/118 (36%), Gaps = 22/118 (18%)
Query: 273 FPVPPRLIAPTAAGFCRHDFLSPPPLLFAAAAF------------YSHRHGFLVPPPWLF 320
FP P AP FC FLSP AAAA+ Y + P P L+
Sbjct: 337 FPQPAAAAAPFCLPFC---FLSPS----AAAAYVQPFLDKSGLEKYLYPAAAAAPFPLLY 389
Query: 321 -ALPQPWLFAPTAEAFCRCAAAAAFCPQSHSFLPSPPRLFAQPLQLFAPEATPFCPRH 377
+P P A A A AAAAAF S P P + A L E P H
Sbjct: 390 PGIPAP--AAAAAAAAAAAAAAAAFPCLSSVLSPPPEKAGAAAATLLPHEVAPLGAPH 445
>gi|124249376 proline rich 21 [Homo sapiens]
Length = 389
Score = 35.8 bits (81), Expect = 0.14
Identities = 41/133 (30%), Positives = 52/133 (39%), Gaps = 21/133 (15%)
Query: 535 LHPPPGLFAPASVTFCHRCFFPRHYGILPPPPRVFAAVAFFNRHCRSFLPPLPQSF--AS 592
LHP P+S T H C F + PR+F H S +P P+ F AS
Sbjct: 50 LHPRLFTHGPSS-TALHPCPFTHGSSPMSLHPRLFT-------HSPSSMPLHPRPFVHAS 101
Query: 593 AAGAFRPCRCSFFAPCHHG--FFPQPPRLFVFFLPPLPLLFAPASVAFYPPQCGFLSPPP 650
+ A RPC + HG P PR FV P L P + + P L P P
Sbjct: 102 SPTALRPCLFT------HGPSSMPLHPRPFVHASSPTAL---PPCLFTHGPSSMPLHPRP 152
Query: 651 RLSPTAAVAFCPC 663
L ++ A PC
Sbjct: 153 FLHASSPTALPPC 165
Score = 35.4 bits (80), Expect = 0.18
Identities = 73/265 (27%), Positives = 100/265 (37%), Gaps = 36/265 (13%)
Query: 414 PRLF--GPTTTAF--CPRHHGFWLLPL--RLFAAAVFAPAAAAFCG--FLPPHSFLASPP 465
PRLF GP++TA CP HG + L RLF +P++ F+ S A P
Sbjct: 52 PRLFTHGPSSTALHPCPFTHGSSPMSLHPRLFT---HSPSSMPLHPRPFVHASSPTALRP 108
Query: 466 WLFVAFLPRRRGFSPPPLRLFAAAVFVPAAAAFCPPAAAVAFCPRHYSFSLLQLFVPEAT 525
LF P P P ++ +P F +++ PR + + +P
Sbjct: 109 CLFTHG-PSSMPLHPRPFVHASSPTALPPCL-FTHGPSSMPLHPRPFLHASSPTALPPCL 166
Query: 526 AFCPHRCGILHPPPGLFAPASVTFCHRCFFPRHYGILPPPPRVF-------AAVAFFNRH 578
LHP P + A +S T C F +P PR F A H
Sbjct: 167 FTHGPSSMPLHPRPFVHA-SSPTALRPCLFTHGPSSMPLHPRPFVHASSPTALPPCLFTH 225
Query: 579 CRSFLPPLPQSF--ASAAGAFRPCRCSFFAPCHHG--FFPQPPRLFVFFLPPL---PLLF 631
S +P P+ F AS+ A RPC + HG P PR F+ P P LF
Sbjct: 226 GPSSMPLHPRPFVHASSPTALRPCLFT------HGPSSMPLHPRPFLHASSPTALRPCLF 279
Query: 632 --APASVAFYPPQCGFLSPPPRLSP 654
P+S+ +P S P L P
Sbjct: 280 THGPSSMPLHPRPFVHASSPTALRP 304
Score = 35.4 bits (80), Expect = 0.18
Identities = 74/275 (26%), Positives = 98/275 (35%), Gaps = 40/275 (14%)
Query: 125 PLQLIPRLADFCPRCCSFFPASWISAPAPVAFRHRCCCFLPPPLRVSPATAYCPRCRGFL 184
P+ L PRL P P ++ A +P A R P + + P L
Sbjct: 75 PMSLHPRLFTHSPSSMPLHPRPFVHASSPTALRPCLFTHGPSSMPLHPRPFVHASSPTAL 134
Query: 185 PPPPWHFAPITMAFCGFLPLR----LFASEATAF--CPWRHGFLALP--PRLFV-AFCPH 235
PP + P +M PL L AS TA C + HG ++P PR FV A P
Sbjct: 135 PPCLFTHGPSSM------PLHPRPFLHASSPTALPPCLFTHGPSSMPLHPRPFVHASSP- 187
Query: 236 HYGFLPPRLF--ASEAMGFLP-PWFFAPEATAF--CPRRHG--FFPVPPR----LIAPTA 284
L P LF +M P P+ A TA C HG P+ PR +PTA
Sbjct: 188 --TALRPCLFTHGPSSMPLHPRPFVHASSPTALPPCLFTHGPSSMPLHPRPFVHASSPTA 245
Query: 285 AGFCRHDF------LSPPPLLFAAAAFYSHRHGFLVPPPWLFALPQPWLFAPTAEAFCRC 338
C L P P L A++ F P + P+P++ A + A C
Sbjct: 246 LRPCLFTHGPSSMPLHPRPFLHASSPTALRPCLFTHGPSSMPLHPRPFVHASSPTALRPC 305
Query: 339 AAAAAFCPQSHSFLPSPPRLFAQPLQLFAPEATPF 373
S +P PR F + PF
Sbjct: 306 -----LFTHGPSSMPLHPRPFVHASSSTSLHPRPF 335
Score = 34.3 bits (77), Expect = 0.39
Identities = 80/314 (25%), Positives = 108/314 (34%), Gaps = 66/314 (21%)
Query: 345 CPQSHSFLPSP--PRLFAQPLQLFAPEATPFCPRHRGFLRHFTP---RRCGFL--PPPQL 397
CP +H P PRLF +P + P PR F+ +P R C F P
Sbjct: 67 CPFTHGSSPMSLHPRLFTH-----SPSSMPLHPRP--FVHASSPTALRPCLFTHGPSSMP 119
Query: 398 LIPIAVAFCSHSFIPPPRLF--GPTTTAFCPRHHGFWLLPLRLFAAAVFAPAAAAFCGFL 455
L P S PP LF GP++ PR L A++ A L
Sbjct: 120 LHPRPFVHASSPTALPPCLFTHGPSSMPLHPRPF--------LHASSPTA---------L 162
Query: 456 PPHSFLASPPWLFVAFLPRRRGFSPPPLRLFAAAVFVPAAAAFCPPAAAVAFCPRHYSFS 515
PP F P + + P SP LR F +++ PR + +
Sbjct: 163 PPCLFTHGPSSMPLHPRPFVHASSPTALR----------PCLFTHGPSSMPLHPRPFVHA 212
Query: 516 LLQLFVPEATAFCPHRCGILHPPPGLFAPASVTFCHRCFFPRHYGILPPPPRVF------ 569
+P LHP P + A +S T C F +P PR F
Sbjct: 213 SSPTALPPCLFTHGPSSMPLHPRPFVHA-SSPTALRPCLFTHGPSSMPLHPRPFLHASSP 271
Query: 570 -AAVAFFNRHCRSFLPPLPQSF--ASAAGAFRPCRCSFFAPCHHGFFPQPPRLFVFFLPP 626
A H S +P P+ F AS+ A RPC + HG P L P
Sbjct: 272 TALRPCLFTHGPSSMPLHPRPFVHASSPTALRPCLFT------HGPSSMP-------LHP 318
Query: 627 LPLLFAPASVAFYP 640
P + A +S + +P
Sbjct: 319 RPFVHASSSTSLHP 332
>gi|239751637 PREDICTED: hypothetical protein FLJ22184 [Homo
sapiens]
Length = 1124
Score = 35.4 bits (80), Expect = 0.18
Identities = 107/422 (25%), Positives = 141/422 (33%), Gaps = 89/422 (21%)
Query: 125 PLQLIPRLADFCPRCCSFFPASWISAPAPVAFRHRCCCFLPPPLRVSPATAYCPRCRGF- 183
PLQ + LA P+ P S + P P+ + PP L+ PA+ P
Sbjct: 488 PLQALSSLASHSPQA----PLSSLIMP-PLETQSSLA---PPSLQTPPASLTTPPLENLP 539
Query: 184 -LPPPPWHFA--PITMAFCGF------LPLRLFASEATAFCPWRHGFLALPPRLFVAFCP 234
L PPP A P+T PL+ S T P +A PP
Sbjct: 540 SLAPPPLQTASAPLTTPHLETPPCPAPCPLQAPPSPLTTPPPETPSSIATPPPQ------ 593
Query: 235 HHYGFLPPRLFASEAMGFLPPWFFAPEATAFCPRRHGFFPVPPRLIAPTA-AGFCRHDFL 293
PP L AS + LP +P AT P+ +PP P+ A
Sbjct: 594 -----APPAL-ASPPLQGLPSPPLSPLATP-PPQAPPXLALPPLQAPPSPPASPPLSPLA 646
Query: 294 SPPPLLFAAAAFYSHRHGFLVPPPWLFALPQPWLFAPTAEAFCRCAAAAAFCPQSHSFLP 353
+P P A A + + F PP +P +A A+ P +
Sbjct: 647 TPSPQAPNALAVHLLQAPFSPPP------------SPPVQAPFSPPASPPVSPSATPPSQ 694
Query: 354 SPPRLFAQPLQLFAPEATPFCPRHRGFLRHFTPRRCGFLPPPQLLIPIAVAFC------- 406
+PP L A PLQ+ P + P P P PPPQ P+A
Sbjct: 695 APPSLAAPPLQV--PPSPPASP----------PMSPSATPPPQAPPPLAAPPLQVPPSPP 742
Query: 407 -----SHSFIPPPRL----------FGPTTTAFCPRHHGFWLLPLRLFAAAVFAPAAAAF 451
S S PPPR+ P+ A P P A+ P A
Sbjct: 743 ASPPMSPSATPPPRVPPLLAAPPLQVPPSPPASLPMSP--LAKPPPQAPPALATPPLQAL 800
Query: 452 CGFLPPHSFLASPPWLFVAFLPRRRGFSPPPLR---LFAAAVFVPAAAAFCPPAAAVAFC 508
PP SF P+ A LP +PPP L A + VP + PPA+
Sbjct: 801 PS--PPASFPGQAPFSPSASLPMSPLATPPPQAPPVLAAPLLQVPPS----PPASPTLQA 854
Query: 509 PR 510
PR
Sbjct: 855 PR 856
Score = 29.6 bits (65), Expect = 9.7
Identities = 107/411 (26%), Positives = 137/411 (33%), Gaps = 67/411 (16%)
Query: 276 PPRLIAPTAAGFCRHDFLSPPPLLFAAAAFYSHRHGFLVPPPWLFALPQPWLFAPTAEAF 335
PPR A A G LS PL + + R VPPP A P P P+
Sbjct: 287 PPRKDAAPALGP-----LSSSPLATPSPSGTKARP---VPPPDNAATPLPATLPPSPPLA 338
Query: 336 CRCAAA--AAFCPQSHSFLPSPPRLFAQPLQLFAPEATPFCPRHRGFLRHFTPRRCGFLP 393
A + P S LPSPP P Q AP + P P +P
Sbjct: 339 TPLPLAPPSPSAPPSLQTLPSPPA--TPPSQ--APPSMTTPPMQ-------APPSLQTIP 387
Query: 394 PPQLLIPIAVAFCSHSFIPPPRLFGP---TTTAFCPR---HHGFWLLPLRLFAAAVFAPA 447
P Q +P ++ S P P TT+ P H F + R A++ +P+
Sbjct: 388 PIQ--VPHSLTSPSLQAPPSPLALSSLQATTSLGSPTLQATHSFLTMSPRQTQASLTSPS 445
Query: 448 AAAFCGFLPPHSFLASPPWLFVAFLPRRRGFSPPPLRLFAAAVFVP-----AAAAFCP-- 500
A PP S P A P + SP L + P + A+ P
Sbjct: 446 RPAST---PPDSPPLQAPLSLPASPPLQTSLSPAVSPLSSPLTIHPLQALSSLASHSPQA 502
Query: 501 PAAAVAFCPRHYSFSLL--QLFVPEATAFCP--HRCGILHPPPGLFAPASVTFCHR---- 552
P +++ P SL L P A+ P L PPP A A +T H
Sbjct: 503 PLSSLIMPPLETQSSLAPPSLQTPPASLTTPPLENLPSLAPPPLQTASAPLTTPHLETPP 562
Query: 553 CFFPRHYGILP-----PPPRVFAAVAFFNRHCRSFLPPLPQSFASAAGAFRPCRCSFFAP 607
C P P PPP +++A P PQ A A A P + P
Sbjct: 563 CPAPCPLQAPPSPLTTPPPETPSSIA----------TPPPQ--APPALASPPLQGLPSPP 610
Query: 608 CHHGFFPQPPRLFVFFLPPLPLLFAPASVAFYPPQCGFLSPPPRLSPTAAV 658
P P LPPL AP S PP +P P+ AV
Sbjct: 611 LSPLATPPPQAPPXLALPPLQ---APPSPPASPPLSPLATPSPQAPNALAV 658
>gi|239746149 PREDICTED: hypothetical protein LOC80164 [Homo
sapiens]
Length = 816
Score = 35.4 bits (80), Expect = 0.18
Identities = 90/354 (25%), Positives = 114/354 (32%), Gaps = 87/354 (24%)
Query: 316 PPWLFALPQPWLFAPTAEAFCRCAAAAAFCPQSHSFLPSPPRLFAQPLQLFAPEATPFCP 375
PP L LP P P+ + + +HSFLPSPP +P AT
Sbjct: 309 PPSLQTLPSPPATPPSQAT---TSLGSPTLQATHSFLPSPP---------LSPLAT---- 352
Query: 376 RHRGFLRHFTPRRCGFLPPPQLLIPIAVAFCSHSFIPPPRLFGPTTTAFCPRHHGFWLLP 435
PPPQ P A+A P P P + P L
Sbjct: 353 -----------------PPPQ--APPALALPPLQAPPSPPASPPLSPLATPSPQAPNALA 393
Query: 436 LRLFAAAVFAPAAAAF-CGFLPPHSFLASPPWLFVAFLPRRR--GFSPPPLRLFAAAVFV 492
+ L A P + F PP ASPP A P + + PPL++ +
Sbjct: 394 VHLLQAPFSPPPSPPVQAPFSPP----ASPPVSPSATPPSQAPPSLAAPPLQVPPSP--- 446
Query: 493 PAAAAFCPPAAAVAFCPRHYSFSLLQLF-----VPEATAFCPHRCGILHPPPGLFAPASV 547
PA+ P A P + LQL P A A P + L PP F P
Sbjct: 447 PASPPMSPSATPPPQAPPPLAAPPLQLAKPPPQAPPALATPPLQA--LPSPPASF-PGQA 503
Query: 548 TFCHRCFFPRHYGILPPP--PRVFAAVAFFNRHCRSFLPPLPQSFASAAGAFRPCRCSFF 605
F P PPP P V AA +PP P + + RP
Sbjct: 504 PFSPSASLPMSPLATPPPQAPPVLAAPLL-------QVPPSPPASPTLQAPRRP------ 550
Query: 606 APCHHGFFPQPPRLFVFFLPPLPLLFAPASVAFYPPQCGFLSPPPRLSPTAAVA 659
P P P L L AP PP PPP SP++ ++
Sbjct: 551 --------PTPGPDTSVSGPRLTLALAPG-----PP------PPPSRSPSSTLS 585
>gi|155030236 ribonuclease III, nuclear isoform 2 [Homo sapiens]
Length = 1337
Score = 34.7 bits (78), Expect = 0.30
Identities = 41/142 (28%), Positives = 48/142 (33%), Gaps = 30/142 (21%)
Query: 522 PEATAFCPHRCGILHPPPGLFAPASVTFCHRCFFPRHYGILPPPPRVFAAVAFFNRHCRS 581
P A +F P +LHP P Y PP + F N +
Sbjct: 29 PSAPSFRPQNLRLLHPQQP---------------PVQYQYEPPSA---PSTTFSNSPAPN 70
Query: 582 FLPPLPQSF-------ASAAGAFRPCRCSFFAPCHHGFFPQP-PRLFVFFLPPLPLLFAP 633
FLPP P SA G PC P H P P P F PP+P P
Sbjct: 71 FLPPRPDFVPFPPPMPPSAQGPLPPCPIRPPFPNHQMRHPFPVPPCFPPMPPPMPCPNNP 130
Query: 634 ASVAFYPPQCG---FLSPPPRL 652
V PP G F+ PPP +
Sbjct: 131 -PVPGAPPGQGTFPFMMPPPSM 151
>gi|155030234 ribonuclease III, nuclear isoform 1 [Homo sapiens]
Length = 1374
Score = 34.7 bits (78), Expect = 0.30
Identities = 41/142 (28%), Positives = 48/142 (33%), Gaps = 30/142 (21%)
Query: 522 PEATAFCPHRCGILHPPPGLFAPASVTFCHRCFFPRHYGILPPPPRVFAAVAFFNRHCRS 581
P A +F P +LHP P Y PP + F N +
Sbjct: 29 PSAPSFRPQNLRLLHPQQP---------------PVQYQYEPPSA---PSTTFSNSPAPN 70
Query: 582 FLPPLPQSF-------ASAAGAFRPCRCSFFAPCHHGFFPQP-PRLFVFFLPPLPLLFAP 633
FLPP P SA G PC P H P P P F PP+P P
Sbjct: 71 FLPPRPDFVPFPPPMPPSAQGPLPPCPIRPPFPNHQMRHPFPVPPCFPPMPPPMPCPNNP 130
Query: 634 ASVAFYPPQCG---FLSPPPRL 652
V PP G F+ PPP +
Sbjct: 131 -PVPGAPPGQGTFPFMMPPPSM 151
>gi|18677735 proline-rich coiled-coil 1 [Homo sapiens]
Length = 445
Score = 33.9 bits (76), Expect = 0.51
Identities = 30/102 (29%), Positives = 39/102 (38%), Gaps = 10/102 (9%)
Query: 584 PPLPQSFASAAGAFRP----CRCSFFAPCHHGFFPQPPRLFVFFLPPLPLLFAPASVAFY 639
PP P A+ A + P SF +P PP + PPLP + A + F
Sbjct: 16 PPNPAGLAATAMSSTPVPLAATSSFSSPNVSSMESFPPLAYSTPQPPLPPVRPSAPLPFV 75
Query: 640 PPQCG------FLSPPPRLSPTAAVAFCPCCRAFLPPWLFVP 675
PP S PP +SP+ A AF + PP P
Sbjct: 76 PPPAVPSVPPLVTSMPPPVSPSTAAAFGNPPVSHFPPSTSAP 117
>gi|239748030 PREDICTED: hypothetical protein XP_002346496 [Homo
sapiens]
Length = 221
Score = 32.7 bits (73), Expect = 1.1
Identities = 36/115 (31%), Positives = 46/115 (40%), Gaps = 23/115 (20%)
Query: 535 LHPPPGLFAPASVTFCHRCFFPRHYGILPPPPRVFAAVAFFNRHCRSFLPPLPQSF--AS 592
LHP P+S T H C F + PR+F H S +P P+ F AS
Sbjct: 50 LHPRLFTHGPSS-TALHPCPFTHGSSPMSLHPRLFT-------HSPSSMPLHPRPFVHAS 101
Query: 593 AAGAFRPCRCSFFAPCHHG--FFPQPPRLFVF-----FLPPLPLLFAPASVAFYP 640
+ A RPC + HG P PR FV LPP P+S+ +P
Sbjct: 102 SPTALRPCLFT------HGPSSMPLHPRPFVHASSPTALPPCLFTHGPSSMPLHP 150
>gi|110832843 TBP-associated factor 4 [Homo sapiens]
Length = 1085
Score = 32.7 bits (73), Expect = 1.1
Identities = 18/47 (38%), Positives = 22/47 (46%)
Query: 624 LPPLPLLFAPASVAFYPPQCGFLSPPPRLSPTAAVAFCPCCRAFLPP 670
L PLP AP +V PP G +PP +P+ A P A PP
Sbjct: 225 LLPLPKPAAPGTVIQTPPFVGAAAPPAPAAPSPPAAPAPAAPAAAPP 271
>gi|42740899 CTAGE family, member 5 isoform 3 [Homo sapiens]
Length = 761
Score = 32.7 bits (73), Expect = 1.1
Identities = 35/113 (30%), Positives = 43/113 (38%), Gaps = 12/113 (10%)
Query: 238 GFLPPRLFASEAMGFLPPWFFAPEATAFCPRRHGFFPVPP-RLIAPTAAGFCRHDFLSPP 296
GF+PP L P F F R F P PP + + F DF PP
Sbjct: 647 GFVPPPLAPIRG-----PLFPVDARGPFLRRGPPFPPPPPGAMFGASRDYFPPGDFPGPP 701
Query: 297 PLLFAAAAFYSHRHGFLVPPPWLFALPQPWLFAPTAEAFCRCAAAAAFCPQSH 349
P FA Y R GF PP+L P+P F P + R + P S+
Sbjct: 702 PAPFAMRNVYPPR-GF---PPYL--PPRPGFFPPPPHSEGRSEFPSGLIPPSN 748
Score = 32.7 bits (73), Expect = 1.1
Identities = 33/110 (30%), Positives = 37/110 (33%), Gaps = 25/110 (22%)
Query: 79 GFLPPLLFATAAAAFCPQHWGFLRLFDPPLGLFAAFCARRPAFLPPPLQLIPRLADFCPR 138
GF+PP L F P+ F R P F PPP P R
Sbjct: 647 GFVPPPLAPIRGPLF-------------PVDARGPFLRRGPPFPPPP----PGAMFGASR 689
Query: 139 CCSFFPASWISAPAPVAFRHRCCCFLPPPLRVSPATAYCPRCRGFLPPPP 188
+FP P P F R + PP P Y P GF PPPP
Sbjct: 690 --DYFPPGDFPGPPPAPFAMRN---VYPPRGFPP---YLPPRPGFFPPPP 731
Database: hs.faa
Posted date: Aug 4, 2009 4:42 PM
Number of letters in database: 18,247,518
Number of sequences in database: 37,866
Lambda K H
0.335 0.147 0.543
Gapped
Lambda K H
0.267 0.0410 0.140
Matrix: BLOSUM62
Gap Penalties: Existence: 11, Extension: 1
Number of Hits to DB: 38,042,597
Number of Sequences: 37866
Number of extensions: 2345576
Number of successful extensions: 10690
Number of sequences better than 10.0: 30
Number of HSP's better than 10.0 without gapping: 21
Number of HSP's successfully gapped in prelim test: 77
Number of HSP's that attempted gapping in prelim test: 8520
Number of HSP's gapped (non-prelim): 479
length of query: 686
length of database: 18,247,518
effective HSP length: 109
effective length of query: 577
effective length of database: 14,120,124
effective search space: 8147311548
effective search space used: 8147311548
T: 11
A: 40
X1: 15 ( 7.2 bits)
X2: 38 (14.6 bits)
X3: 64 (24.7 bits)
S1: 39 (21.6 bits)
S2: 65 (29.6 bits)
Search results were obtained with NCBI BLAST and RefSeq entries.
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Guide to the Human Genome
Copyright © 2010 by Stewart Scherer. All rights reserved.