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Search of human proteins with 239749477
BLASTP 2.2.11 [Jun-05-2005]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= gi|239749477 PREDICTED: hypothetical protein XP_002347062 [Homo
sapiens]
(397 letters)
Database: hs.faa
37,866 sequences; 18,247,518 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
gi|239754935 PREDICTED: hypothetical protein [Homo sapiens] 813 0.0
gi|239749477 PREDICTED: hypothetical protein XP_002347062 [Homo ... 813 0.0
gi|239743615 PREDICTED: hypothetical protein XP_002342915 [Homo ... 813 0.0
gi|169162152 PREDICTED: hypothetical protein [Homo sapiens] 49 1e-05
gi|169161145 PREDICTED: hypothetical protein [Homo sapiens] 49 1e-05
gi|239750574 PREDICTED: hypothetical protein [Homo sapiens] 48 1e-05
gi|169205732 PREDICTED: hypothetical protein [Homo sapiens] 48 1e-05
gi|169204928 PREDICTED: hypothetical protein [Homo sapiens] 46 5e-05
gi|113423861 PREDICTED: hypothetical protein [Homo sapiens] 46 5e-05
gi|113423437 PREDICTED: hypothetical protein [Homo sapiens] 46 5e-05
gi|118766337 zinc finger protein of the cerebellum 5 [Homo sapiens] 42 0.001
gi|239754674 PREDICTED: hypothetical protein [Homo sapiens] 40 0.003
gi|239746530 PREDICTED: hypothetical protein XP_002343754 [Homo ... 40 0.004
gi|239757130 PREDICTED: hypothetical protein FLJ22184 [Homo sapi... 40 0.005
gi|239751637 PREDICTED: hypothetical protein FLJ22184 [Homo sapi... 40 0.005
gi|239751929 PREDICTED: hypothetical protein [Homo sapiens] 39 0.006
gi|239746415 PREDICTED: hypothetical protein XP_002344217 [Homo ... 39 0.006
gi|194363768 homeobox D9 [Homo sapiens] 39 0.011
gi|150418009 transforming, acidic coiled-coil containing protein... 39 0.011
gi|120587025 SH3 and multiple ankyrin repeat domains 1 [Homo sap... 39 0.011
gi|59806361 hypothetical protein LOC387104 [Homo sapiens] 37 0.024
gi|13376335 hypothetical protein LOC79946 [Homo sapiens] 37 0.024
gi|169210256 PREDICTED: hypothetical protein [Homo sapiens] 37 0.031
gi|169204930 PREDICTED: hypothetical protein [Homo sapiens] 37 0.031
gi|239750393 PREDICTED: hypothetical protein [Homo sapiens] 37 0.031
gi|239744694 PREDICTED: hypothetical protein [Homo sapiens] 37 0.031
gi|238624195 hypothetical protein LOC221545 isoform 3 [Homo sapi... 37 0.031
gi|149158690 HLA-B associated transcript-2 [Homo sapiens] 37 0.031
gi|182507165 thymus expressed gene 3-like [Homo sapiens] 37 0.031
gi|40255047 pleckstrin homology domain containing, family H (wit... 37 0.031
>gi|239754935 PREDICTED: hypothetical protein [Homo sapiens]
Length = 397
Score = 813 bits (2100), Expect = 0.0
Identities = 397/397 (100%), Positives = 397/397 (100%)
Query: 1 MQADLLRRVGAAAGVEITGKCVGRKGERSPVKRGLESKRGKKASNIEECSSGAPRGIFLQ 60
MQADLLRRVGAAAGVEITGKCVGRKGERSPVKRGLESKRGKKASNIEECSSGAPRGIFLQ
Sbjct: 1 MQADLLRRVGAAAGVEITGKCVGRKGERSPVKRGLESKRGKKASNIEECSSGAPRGIFLQ 60
Query: 61 KELAGLEGELILDSAAILEQAHSGDIRTNVQELQDVHDELLDLCIVMGVDTARAVNDENQ 120
KELAGLEGELILDSAAILEQAHSGDIRTNVQELQDVHDELLDLCIVMGVDTARAVNDENQ
Sbjct: 61 KELAGLEGELILDSAAILEQAHSGDIRTNVQELQDVHDELLDLCIVMGVDTARAVNDENQ 120
Query: 121 RWTSHVTAPWPRQGGGRSVRGSAESSLRASFPFSRRARGARLQPPAPGKRGRGAATRVFL 180
RWTSHVTAPWPRQGGGRSVRGSAESSLRASFPFSRRARGARLQPPAPGKRGRGAATRVFL
Sbjct: 121 RWTSHVTAPWPRQGGGRSVRGSAESSLRASFPFSRRARGARLQPPAPGKRGRGAATRVFL 180
Query: 181 VGLFASPRAAALLGDRSWEARTEPQLLPLPLSPPPPLAPSPIPERSLRSLAAWEALGKGG 240
VGLFASPRAAALLGDRSWEARTEPQLLPLPLSPPPPLAPSPIPERSLRSLAAWEALGKGG
Sbjct: 181 VGLFASPRAAALLGDRSWEARTEPQLLPLPLSPPPPLAPSPIPERSLRSLAAWEALGKGG 240
Query: 241 RLGRRCRGGGGERAGRKEGCPLWGWGRRGEGAAARAAPPCGQPRELGTLAARPACCHLAP 300
RLGRRCRGGGGERAGRKEGCPLWGWGRRGEGAAARAAPPCGQPRELGTLAARPACCHLAP
Sbjct: 241 RLGRRCRGGGGERAGRKEGCPLWGWGRRGEGAAARAAPPCGQPRELGTLAARPACCHLAP 300
Query: 301 LRPCLSPGGHQTPGVRSRRHGTQAALGACRVGSAGRGLLGERRHGRNLTSRTWGHDLRDA 360
LRPCLSPGGHQTPGVRSRRHGTQAALGACRVGSAGRGLLGERRHGRNLTSRTWGHDLRDA
Sbjct: 301 LRPCLSPGGHQTPGVRSRRHGTQAALGACRVGSAGRGLLGERRHGRNLTSRTWGHDLRDA 360
Query: 361 PTDAGMEKKVVRIGLIDDKRQELSCQCPEHPTSASSY 397
PTDAGMEKKVVRIGLIDDKRQELSCQCPEHPTSASSY
Sbjct: 361 PTDAGMEKKVVRIGLIDDKRQELSCQCPEHPTSASSY 397
>gi|239749477 PREDICTED: hypothetical protein XP_002347062 [Homo
sapiens]
Length = 397
Score = 813 bits (2100), Expect = 0.0
Identities = 397/397 (100%), Positives = 397/397 (100%)
Query: 1 MQADLLRRVGAAAGVEITGKCVGRKGERSPVKRGLESKRGKKASNIEECSSGAPRGIFLQ 60
MQADLLRRVGAAAGVEITGKCVGRKGERSPVKRGLESKRGKKASNIEECSSGAPRGIFLQ
Sbjct: 1 MQADLLRRVGAAAGVEITGKCVGRKGERSPVKRGLESKRGKKASNIEECSSGAPRGIFLQ 60
Query: 61 KELAGLEGELILDSAAILEQAHSGDIRTNVQELQDVHDELLDLCIVMGVDTARAVNDENQ 120
KELAGLEGELILDSAAILEQAHSGDIRTNVQELQDVHDELLDLCIVMGVDTARAVNDENQ
Sbjct: 61 KELAGLEGELILDSAAILEQAHSGDIRTNVQELQDVHDELLDLCIVMGVDTARAVNDENQ 120
Query: 121 RWTSHVTAPWPRQGGGRSVRGSAESSLRASFPFSRRARGARLQPPAPGKRGRGAATRVFL 180
RWTSHVTAPWPRQGGGRSVRGSAESSLRASFPFSRRARGARLQPPAPGKRGRGAATRVFL
Sbjct: 121 RWTSHVTAPWPRQGGGRSVRGSAESSLRASFPFSRRARGARLQPPAPGKRGRGAATRVFL 180
Query: 181 VGLFASPRAAALLGDRSWEARTEPQLLPLPLSPPPPLAPSPIPERSLRSLAAWEALGKGG 240
VGLFASPRAAALLGDRSWEARTEPQLLPLPLSPPPPLAPSPIPERSLRSLAAWEALGKGG
Sbjct: 181 VGLFASPRAAALLGDRSWEARTEPQLLPLPLSPPPPLAPSPIPERSLRSLAAWEALGKGG 240
Query: 241 RLGRRCRGGGGERAGRKEGCPLWGWGRRGEGAAARAAPPCGQPRELGTLAARPACCHLAP 300
RLGRRCRGGGGERAGRKEGCPLWGWGRRGEGAAARAAPPCGQPRELGTLAARPACCHLAP
Sbjct: 241 RLGRRCRGGGGERAGRKEGCPLWGWGRRGEGAAARAAPPCGQPRELGTLAARPACCHLAP 300
Query: 301 LRPCLSPGGHQTPGVRSRRHGTQAALGACRVGSAGRGLLGERRHGRNLTSRTWGHDLRDA 360
LRPCLSPGGHQTPGVRSRRHGTQAALGACRVGSAGRGLLGERRHGRNLTSRTWGHDLRDA
Sbjct: 301 LRPCLSPGGHQTPGVRSRRHGTQAALGACRVGSAGRGLLGERRHGRNLTSRTWGHDLRDA 360
Query: 361 PTDAGMEKKVVRIGLIDDKRQELSCQCPEHPTSASSY 397
PTDAGMEKKVVRIGLIDDKRQELSCQCPEHPTSASSY
Sbjct: 361 PTDAGMEKKVVRIGLIDDKRQELSCQCPEHPTSASSY 397
>gi|239743615 PREDICTED: hypothetical protein XP_002342915 [Homo
sapiens]
Length = 397
Score = 813 bits (2100), Expect = 0.0
Identities = 397/397 (100%), Positives = 397/397 (100%)
Query: 1 MQADLLRRVGAAAGVEITGKCVGRKGERSPVKRGLESKRGKKASNIEECSSGAPRGIFLQ 60
MQADLLRRVGAAAGVEITGKCVGRKGERSPVKRGLESKRGKKASNIEECSSGAPRGIFLQ
Sbjct: 1 MQADLLRRVGAAAGVEITGKCVGRKGERSPVKRGLESKRGKKASNIEECSSGAPRGIFLQ 60
Query: 61 KELAGLEGELILDSAAILEQAHSGDIRTNVQELQDVHDELLDLCIVMGVDTARAVNDENQ 120
KELAGLEGELILDSAAILEQAHSGDIRTNVQELQDVHDELLDLCIVMGVDTARAVNDENQ
Sbjct: 61 KELAGLEGELILDSAAILEQAHSGDIRTNVQELQDVHDELLDLCIVMGVDTARAVNDENQ 120
Query: 121 RWTSHVTAPWPRQGGGRSVRGSAESSLRASFPFSRRARGARLQPPAPGKRGRGAATRVFL 180
RWTSHVTAPWPRQGGGRSVRGSAESSLRASFPFSRRARGARLQPPAPGKRGRGAATRVFL
Sbjct: 121 RWTSHVTAPWPRQGGGRSVRGSAESSLRASFPFSRRARGARLQPPAPGKRGRGAATRVFL 180
Query: 181 VGLFASPRAAALLGDRSWEARTEPQLLPLPLSPPPPLAPSPIPERSLRSLAAWEALGKGG 240
VGLFASPRAAALLGDRSWEARTEPQLLPLPLSPPPPLAPSPIPERSLRSLAAWEALGKGG
Sbjct: 181 VGLFASPRAAALLGDRSWEARTEPQLLPLPLSPPPPLAPSPIPERSLRSLAAWEALGKGG 240
Query: 241 RLGRRCRGGGGERAGRKEGCPLWGWGRRGEGAAARAAPPCGQPRELGTLAARPACCHLAP 300
RLGRRCRGGGGERAGRKEGCPLWGWGRRGEGAAARAAPPCGQPRELGTLAARPACCHLAP
Sbjct: 241 RLGRRCRGGGGERAGRKEGCPLWGWGRRGEGAAARAAPPCGQPRELGTLAARPACCHLAP 300
Query: 301 LRPCLSPGGHQTPGVRSRRHGTQAALGACRVGSAGRGLLGERRHGRNLTSRTWGHDLRDA 360
LRPCLSPGGHQTPGVRSRRHGTQAALGACRVGSAGRGLLGERRHGRNLTSRTWGHDLRDA
Sbjct: 301 LRPCLSPGGHQTPGVRSRRHGTQAALGACRVGSAGRGLLGERRHGRNLTSRTWGHDLRDA 360
Query: 361 PTDAGMEKKVVRIGLIDDKRQELSCQCPEHPTSASSY 397
PTDAGMEKKVVRIGLIDDKRQELSCQCPEHPTSASSY
Sbjct: 361 PTDAGMEKKVVRIGLIDDKRQELSCQCPEHPTSASSY 397
>gi|169162152 PREDICTED: hypothetical protein [Homo sapiens]
Length = 520
Score = 48.5 bits (114), Expect = 1e-05
Identities = 64/202 (31%), Positives = 78/202 (38%), Gaps = 57/202 (28%)
Query: 131 PRQGGGRSVRG---------------SAESSLRASFPFSRRARGARLQP-----PAPGKR 170
P +G GR RG + E S+ + P ++ AR R P A G R
Sbjct: 181 PGRGSGRVPRGQPEQQAWEQRSSHFLAPEGSVASLLPSAKPARAPRPAPRAREEAAAGSR 240
Query: 171 GRGAATRVFLVGLFASPRAAALLGDRSWE-----ARTEPQLLP-LPLSPPPPLAP----- 219
GRG A R G P A LL + AR+ P L P L + PP LA
Sbjct: 241 GRGGAERPAARGSAQQPPLARLLLASAVSLAASLARSPPPLQPRLGSASPPRLAAPLAGS 300
Query: 220 -----SPIPERSLR---------SLAAWEALGKGGR-LGRRCRGGGGER--AGRKEGCPL 262
SP P R R L +L +GG +G R R GG ER GR++GC L
Sbjct: 301 RAPSLSPFPRRCRRRAERSPAGHGLPLPRSLSRGGEVVGARRRRGGEERRVRGRRQGCAL 360
Query: 263 W---------GWGRRGEGAAAR 275
GR GE AAR
Sbjct: 361 GSPPIPAGPAAPGRAGERRAAR 382
>gi|169161145 PREDICTED: hypothetical protein [Homo sapiens]
Length = 520
Score = 48.5 bits (114), Expect = 1e-05
Identities = 64/202 (31%), Positives = 78/202 (38%), Gaps = 57/202 (28%)
Query: 131 PRQGGGRSVRG---------------SAESSLRASFPFSRRARGARLQP-----PAPGKR 170
P +G GR RG + E S+ + P ++ AR R P A G R
Sbjct: 181 PGRGSGRVPRGQPEQQAWEQRSSHFLAPEGSVASLLPSAKPARAPRPAPRAREEAAAGSR 240
Query: 171 GRGAATRVFLVGLFASPRAAALLGDRSWE-----ARTEPQLLP-LPLSPPPPLAP----- 219
GRG A R G P A LL + AR+ P L P L + PP LA
Sbjct: 241 GRGGAERPAARGSAQQPPLARLLLASAVSLAASLARSPPPLQPRLGSASPPRLAAPLAGS 300
Query: 220 -----SPIPERSLR---------SLAAWEALGKGGR-LGRRCRGGGGER--AGRKEGCPL 262
SP P R R L +L +GG +G R R GG ER GR++GC L
Sbjct: 301 RAPSLSPFPRRCRRRAERSPAGHGLPLPRSLSRGGEVVGARRRRGGEERRVRGRRQGCAL 360
Query: 263 W---------GWGRRGEGAAAR 275
GR GE AAR
Sbjct: 361 GSPPIPAGPAAPGRAGERRAAR 382
>gi|239750574 PREDICTED: hypothetical protein [Homo sapiens]
Length = 1297
Score = 48.1 bits (113), Expect = 1e-05
Identities = 46/152 (30%), Positives = 52/152 (34%), Gaps = 12/152 (7%)
Query: 241 RLGRRCRGGGGERAGRKEGCPLWGWGRR-----GEGAAARAAPPCGQPRELGTLAARPAC 295
R GRR G A ++G G GRR G GAA PC Q R L AA A
Sbjct: 853 RAGRRRVGARAVAAAGRQGAGAGGGGRRVRHGHGHGAAVLQRAPCRQQRHLAPAAAAAAA 912
Query: 296 CHLAPL-----RPCL--SPGGHQTPGVRSRRHGTQAALGACRVGSAGRGLLGERRHGRNL 348
+ RP +P PG R RR +AA+ R LG RR G
Sbjct: 913 QGVRAAQGRAHRPGAQGAPSHRHRPGARGRRSRRRAAVALAGGAHPARAALGRRRGGGQA 972
Query: 349 TSRTWGHDLRDAPTDAGMEKKVVRIGLIDDKR 380
H R A R G D R
Sbjct: 973 VGARAAHQARLAGGQVDQVVVAARAGDADGVR 1004
>gi|169205732 PREDICTED: hypothetical protein [Homo sapiens]
Length = 1297
Score = 48.1 bits (113), Expect = 1e-05
Identities = 46/152 (30%), Positives = 52/152 (34%), Gaps = 12/152 (7%)
Query: 241 RLGRRCRGGGGERAGRKEGCPLWGWGRR-----GEGAAARAAPPCGQPRELGTLAARPAC 295
R GRR G A ++G G GRR G GAA PC Q R L AA A
Sbjct: 853 RAGRRRVGARAVAAAGRQGAGAGGGGRRVRHGHGHGAAVLQRAPCRQQRHLAPAAAAAAA 912
Query: 296 CHLAPL-----RPCL--SPGGHQTPGVRSRRHGTQAALGACRVGSAGRGLLGERRHGRNL 348
+ RP +P PG R RR +AA+ R LG RR G
Sbjct: 913 QGVRAAQGRAHRPGAQGAPSHRHRPGARGRRSRRRAAVALAGGAHPARAALGRRRGGGQA 972
Query: 349 TSRTWGHDLRDAPTDAGMEKKVVRIGLIDDKR 380
H R A R G D R
Sbjct: 973 VGARAAHQARLAGGQVDQVVVAARAGDADGVR 1004
>gi|169204928 PREDICTED: hypothetical protein [Homo sapiens]
Length = 215
Score = 46.2 bits (108), Expect = 5e-05
Identities = 50/176 (28%), Positives = 69/176 (39%), Gaps = 28/176 (15%)
Query: 115 VNDENQRWTSHVTAPW------PRQGGGRSVRGSAESSLRASFPFSRRARGARLQPPAPG 168
V E +R + ++A W PRQ R + S A P+ GA + P
Sbjct: 42 VGAETRRGAAQMSADWGFALICPRQE-----RSPSPSRWLAPGPWRGMGPGAVREGP--- 93
Query: 169 KRGRGAATRVFLVGLFASPRAAALLGDRSWEAR-----TEPQLLPLPLSPPPPLAPSPIP 223
+ +GA T + P AA R+ A T P+ P P PPPPL P+P
Sbjct: 94 -QVKGARTSPAAIIALLPPHVAAAARPRAETAAVTDGVTSPRAWPPP--PPPPLPPAPTR 150
Query: 224 ERSLRSLAAWEALGKGGRLGRRCRGGGGERAGRKEGCPLWGWGRRGEGAAARAAPP 279
+ A+ G G R G R RG G +A G ++G G R +PP
Sbjct: 151 HGNTDVRASQPIAGCGRREGARWRGRGQRQAKALRG------RKKGRGVRRRKSPP 200
>gi|113423861 PREDICTED: hypothetical protein [Homo sapiens]
Length = 215
Score = 46.2 bits (108), Expect = 5e-05
Identities = 50/176 (28%), Positives = 69/176 (39%), Gaps = 28/176 (15%)
Query: 115 VNDENQRWTSHVTAPW------PRQGGGRSVRGSAESSLRASFPFSRRARGARLQPPAPG 168
V E +R + ++A W PRQ R + S A P+ GA + P
Sbjct: 42 VGAETRRGAAQMSADWGFALICPRQE-----RSPSPSRWLAPGPWRGMGPGAVREGP--- 93
Query: 169 KRGRGAATRVFLVGLFASPRAAALLGDRSWEAR-----TEPQLLPLPLSPPPPLAPSPIP 223
+ +GA T + P AA R+ A T P+ P P PPPPL P+P
Sbjct: 94 -QVKGARTSPAAIIALLPPHVAAAARPRAETAAVTDGVTSPRAWPPP--PPPPLPPAPTR 150
Query: 224 ERSLRSLAAWEALGKGGRLGRRCRGGGGERAGRKEGCPLWGWGRRGEGAAARAAPP 279
+ A+ G G R G R RG G +A G ++G G R +PP
Sbjct: 151 HGNTDVRASQPIAGCGRREGARWRGRGQRQAKALRG------RKKGRGVRRRKSPP 200
>gi|113423437 PREDICTED: hypothetical protein [Homo sapiens]
Length = 215
Score = 46.2 bits (108), Expect = 5e-05
Identities = 50/176 (28%), Positives = 69/176 (39%), Gaps = 28/176 (15%)
Query: 115 VNDENQRWTSHVTAPW------PRQGGGRSVRGSAESSLRASFPFSRRARGARLQPPAPG 168
V E +R + ++A W PRQ R + S A P+ GA + P
Sbjct: 42 VGAETRRGAAQMSADWGFALICPRQE-----RSPSPSRWLAPGPWRGMGPGAVREGP--- 93
Query: 169 KRGRGAATRVFLVGLFASPRAAALLGDRSWEAR-----TEPQLLPLPLSPPPPLAPSPIP 223
+ +GA T + P AA R+ A T P+ P P PPPPL P+P
Sbjct: 94 -QVKGARTSPAAIIALLPPHVAAAARPRAETAAVTDGVTSPRAWPPP--PPPPLPPAPTR 150
Query: 224 ERSLRSLAAWEALGKGGRLGRRCRGGGGERAGRKEGCPLWGWGRRGEGAAARAAPP 279
+ A+ G G R G R RG G +A G ++G G R +PP
Sbjct: 151 HGNTDVRASQPIAGCGRREGARWRGRGQRQAKALRG------RKKGRGVRRRKSPP 200
>gi|118766337 zinc finger protein of the cerebellum 5 [Homo sapiens]
Length = 663
Score = 42.0 bits (97), Expect = 0.001
Identities = 58/193 (30%), Positives = 66/193 (34%), Gaps = 28/193 (14%)
Query: 164 PPAPGKRGRGAATRVFLVGLFASPRAAAL-LGDRSWEARTE---PQLLPLPLSPPPPLAP 219
P AP R AA L A P A + G S A+ P PLP +P PP P
Sbjct: 115 PEAPAAAARAAA-------LVAHPGAGSYPCGGGSSGAQPSAPPPPAPPLPPTPSPPPPP 167
Query: 220 SPIPERSLRSLAAWEALGKGGRLGR--------RCRGGGGERAGRKEGCPLWGWGRRGEG 271
P P +L + G GG G+ R A G PL G R G G
Sbjct: 168 PPPPPPALSGYTTTNS-GGGGSSGKGHSRDFVLRRDLSATAPAAAMHGAPLGGEQRSGTG 226
Query: 272 AAARAAPP---CGQPRELGTLAARPACCHLAPLRPCL-----SPGGHQTPGVRSRRHGTQ 323
+ APP G A P L P L +PGGH P R G
Sbjct: 227 SPQHPAPPPHSAGMFISASGTYAGPDGSGGPALFPALHDTPGAPGGHPHPLNGQMRLGLA 286
Query: 324 AALGACRVGSAGR 336
AA A GR
Sbjct: 287 AAAAAAAAELYGR 299
>gi|239754674 PREDICTED: hypothetical protein [Homo sapiens]
Length = 480
Score = 40.4 bits (93), Expect = 0.003
Identities = 48/162 (29%), Positives = 57/162 (35%), Gaps = 18/162 (11%)
Query: 186 SPRAAALLGDRSWEARTEPQLLPLPLSPPPPLAPSPIPERSLRSLAAWEALGKGGRLGRR 245
+P A R+ A EP+L PPP P + R+ RS AA GR G
Sbjct: 215 APPARVREPGRAEGASREPRLRSRAARPPPAPGPGAL-SRASRSRAA-------GRPGPG 266
Query: 246 CRGGGGERAGRKEGCPLWGWGRRGEGAAARAAPPCGQPRELGTLAARPACCHLAPLR--P 303
GG A R G G G R GA RAAPP ++ L+ C LR
Sbjct: 267 FHGGEKAAAPRAPG----GGGGRNPGALGRAAPPSRARQDAWGLSG----CATVGLRRGD 318
Query: 304 CLSPGGHQTPGVRSRRHGTQAALGACRVGSAGRGLLGERRHG 345
C G Q P + R G G G HG
Sbjct: 319 CDRAGSSQPPATSGNGERCRFCRRRRRRGGGGEGEGTHATHG 360
>gi|239746530 PREDICTED: hypothetical protein XP_002343754 [Homo
sapiens]
Length = 536
Score = 40.0 bits (92), Expect = 0.004
Identities = 72/249 (28%), Positives = 86/249 (34%), Gaps = 71/249 (28%)
Query: 134 GGGRSVRGS-AESSLRASFPFSRRARGARLQPP--APGKR-------------GRGAAT- 176
G S RGS S R + P R +R AR + P AP +R GRG
Sbjct: 84 GAAGSARGSEGRPSSRQARPLRRPSRRARRRAPRCAPDRRCGDSAPRHRPRALGRGRRPL 143
Query: 177 --RVFLVGL--FASPR--------------AAALLGDRSWE--------ARTEPQLLPLP 210
RV L L F PR L R W AR +P
Sbjct: 144 RGRVLLRQLDPFTRPRFPLQFFQGCPQPSRCLGRLEPRRWRGHGLQPGGARAPGLQVP-- 201
Query: 211 LSPPPPLAPSPIPERSLRSLAAWEALGKGGRLGRRCRGGGGERAGRKEGCPLWGWGRRGE 270
+PP P +P+P+P R KG R CRGG + AG+ G L G RG
Sbjct: 202 -APPGPASPAPLPARQPH---------KGVRPLGCCRGGRAQAAGQPRGLCLPG---RGR 248
Query: 271 GAAARAAPPCGQPR-ELGTLAARPACCHLAPLRPCLSPGGHQTPGVRSRRHGTQAALGAC 329
A A Q R + + A RP APL P RR + C
Sbjct: 249 DRAVEAGDAVAQVRVQSHSFAPRPR----APLA--------VAPAALQRRESEFTLMRMC 296
Query: 330 RVGSAGRGL 338
R A RGL
Sbjct: 297 REEQALRGL 305
>gi|239757130 PREDICTED: hypothetical protein FLJ22184 [Homo
sapiens]
Length = 855
Score = 39.7 bits (91), Expect = 0.005
Identities = 42/143 (29%), Positives = 58/143 (40%), Gaps = 24/143 (16%)
Query: 200 ARTEPQLLPLPLSPPPPLAPSPIPERSLRSLAAWEALGKGGRLGRRCRGGGGERAGRKEG 259
ART P L+P PP +P P P + AA LG G +GR+ ERAG G
Sbjct: 14 ARTPAARAPGLLTPRPPGSPRPPPP---VTPAALRVLGAAGAVGRKPL---AERAGGIGG 67
Query: 260 CPLWGWGRRGEGAAARAAPPCGQPRELGTLAARPACCHLAPLRPCLSPGGHQTPGVRSRR 319
+ +AP G R GT + PA RP S G + P ++
Sbjct: 68 ATI-----------PESAPRAGPTRSAGTSSRNPAS------RPPASGRGERAPPAKNTS 110
Query: 320 HGTQAALGACRVGSAGRGLLGER 342
G ++ G G+ G LG++
Sbjct: 111 PGPVSSPGRAS-GTTRPGPLGQK 132
>gi|239751637 PREDICTED: hypothetical protein FLJ22184 [Homo
sapiens]
Length = 1124
Score = 39.7 bits (91), Expect = 0.005
Identities = 42/143 (29%), Positives = 58/143 (40%), Gaps = 24/143 (16%)
Query: 200 ARTEPQLLPLPLSPPPPLAPSPIPERSLRSLAAWEALGKGGRLGRRCRGGGGERAGRKEG 259
ART P L+P PP +P P P + AA LG G +GR+ ERAG G
Sbjct: 14 ARTPAARAPGLLTPRPPGSPRPPPP---VTPAALRVLGAAGAVGRKPL---AERAGGIGG 67
Query: 260 CPLWGWGRRGEGAAARAAPPCGQPRELGTLAARPACCHLAPLRPCLSPGGHQTPGVRSRR 319
+ +AP G R GT + PA RP S G + P ++
Sbjct: 68 ATI-----------PESAPRAGPTRSAGTSSRNPAS------RPPASGRGERAPPAKNTS 110
Query: 320 HGTQAALGACRVGSAGRGLLGER 342
G ++ G G+ G LG++
Sbjct: 111 PGPVSSPGRAS-GTTRPGPLGQK 132
>gi|239751929 PREDICTED: hypothetical protein [Homo sapiens]
Length = 382
Score = 39.3 bits (90), Expect = 0.006
Identities = 46/148 (31%), Positives = 54/148 (36%), Gaps = 20/148 (13%)
Query: 152 PFSRRARGARLQPPAPGKRGRGAATRVFLVGLFASPRAAALLGDRSWEARTEPQLLPLPL 211
P RR RG R PPA + G + S R G R+ AR P P
Sbjct: 78 PHRRRRRGTRRLPPA-----------LTPAGPYHSARPGG--GARARAARVSPPTPPRSG 124
Query: 212 SPPPPLAPSPIPERSLRSLAAWEALGKGGRLG---RRCRGGGGERAGRKEGCPLWGWGRR 268
P +P+P P R A L GGRL RR G +R G G + R
Sbjct: 125 LDPAVPSPTPAPLARCRQTRAGLRLSTGGRLSPPLRRAASGEWKRPG---GLTQGEFAGR 181
Query: 269 GEGAA-ARAAPPCGQPRELGTLAARPAC 295
G G A P +PR G AR C
Sbjct: 182 GAGGARVTHRPGRLRPRGRGRGRARRTC 209
>gi|239746415 PREDICTED: hypothetical protein XP_002344217 [Homo
sapiens]
Length = 382
Score = 39.3 bits (90), Expect = 0.006
Identities = 46/148 (31%), Positives = 54/148 (36%), Gaps = 20/148 (13%)
Query: 152 PFSRRARGARLQPPAPGKRGRGAATRVFLVGLFASPRAAALLGDRSWEARTEPQLLPLPL 211
P RR RG R PPA + G + S R G R+ AR P P
Sbjct: 78 PHRRRRRGTRRLPPA-----------LTPAGPYHSARPGG--GARARAARVSPPTPPRSG 124
Query: 212 SPPPPLAPSPIPERSLRSLAAWEALGKGGRLG---RRCRGGGGERAGRKEGCPLWGWGRR 268
P +P+P P R A L GGRL RR G +R G G + R
Sbjct: 125 LDPAVPSPTPAPLARCRQTRAGLRLSTGGRLSPPLRRAASGEWKRPG---GLTQGEFAGR 181
Query: 269 GEGAA-ARAAPPCGQPRELGTLAARPAC 295
G G A P +PR G AR C
Sbjct: 182 GAGGARVTHRPGRLRPRGRGRGRARRTC 209
>gi|194363768 homeobox D9 [Homo sapiens]
Length = 352
Score = 38.5 bits (88), Expect = 0.011
Identities = 47/135 (34%), Positives = 53/135 (39%), Gaps = 18/135 (13%)
Query: 160 ARLQPPAPGKRGR-------GAATRVFLVGLFASPRAAALLGDRSWEA-RTEPQL----- 206
AR PP PG +GR AAT +PR+A SW A ++P
Sbjct: 36 ARFGPPGPGAQGRPAGVADGPAATAAEFASCSFAPRSAVF--SASWSAVPSQPPAAAAMS 93
Query: 207 -LPLPLSPPPPLAPSPI-PERSLRSLAAWEALGKGGRLGRRCRGGGGERAGRKEGCPLWG 264
L P PPPPLA S P R +RS GG G GGGG G G
Sbjct: 94 GLYHPYVPPPPLAASASEPGRYVRSWMEPLPGFPGGAGGGGGGGGGGPGRGPSPGPSGPA 153
Query: 265 WGRR-GEGAAARAAP 278
GR G RAAP
Sbjct: 154 NGRHYGIKPETRAAP 168
>gi|150418009 transforming, acidic coiled-coil containing protein 2
isoform a [Homo sapiens]
Length = 2948
Score = 38.5 bits (88), Expect = 0.011
Identities = 32/89 (35%), Positives = 45/89 (50%), Gaps = 10/89 (11%)
Query: 223 PERSLRSLAAWEALGKGGRLGRRCRG--GGGERAGRKEGC-PLWGWGRRGEGAA-ARAAP 278
P +S ++LA +AL +G + C+ G E A +GC PLWG +R + AP
Sbjct: 990 PNKSQQALA--DALEEGSQHEEACQRHPGASEAA---DGCSPLWGLSKREMASGNTGEAP 1044
Query: 279 PCGQPRELGTLAARPACCHLAPLRPCLSP 307
PC QP + L A P LAP P ++P
Sbjct: 1045 PC-QPDSVALLDAVPCLPALAPASPGVTP 1072
>gi|120587025 SH3 and multiple ankyrin repeat domains 1 [Homo sapiens]
Length = 2161
Score = 38.5 bits (88), Expect = 0.011
Identities = 42/127 (33%), Positives = 52/127 (40%), Gaps = 28/127 (22%)
Query: 122 WTSHVTAPWPRQGGGRSVRGSAESSLRASFPFSRRARGARLQPPAPGKRGRGAATRVFLV 181
W + P R+ G R+ GS E SL AS P +RR+ RL P APG L+
Sbjct: 1408 WGASPPDPARRELGYRAGLGSQEKSLPASPPAARRSLLHRLPPTAPG-------VGPLLL 1460
Query: 182 GLFASPRAAALLGDRSWE--ARTEPQLLPL---------PLSP------PP----PLAPS 220
L P A + W A EP+ LPL P +P PP P P
Sbjct: 1461 QLGTEPPAPHPGVSKPWRSAAPEEPERLPLHVRFLENCQPRAPVTSGRGPPSEDGPGVPP 1520
Query: 221 PIPERSL 227
P P RS+
Sbjct: 1521 PSPRRSV 1527
>gi|59806361 hypothetical protein LOC387104 [Homo sapiens]
Length = 947
Score = 37.4 bits (85), Expect = 0.024
Identities = 59/202 (29%), Positives = 73/202 (36%), Gaps = 63/202 (31%)
Query: 159 GARLQPPAPGKRGRGAATRVF--------------LVGLFASPRAA-ALLGDRSWEARTE 203
G+R PPA + G G A + + G A+P A A LG R E
Sbjct: 86 GSRTGPPASIRGGGGGAEKATPLAPKGAAPGAVQPVAGAEAAPAATLAALGGRRPGPPEE 145
Query: 204 P----QLLPLPLSPPPPLAPSPIPERSLRSLAAWEALGKGGRLGRRCRGGGGERAGRKEG 259
P + +P L PPP LG+GG G G GG R+ G
Sbjct: 146 PPRELESVPSKLGEPPP-------------------LGEGGGGGGEGGGAGGGSGEREGG 186
Query: 260 CPL----WGWGRRGEGAAARAAPPCGQPRELGTLAARPACCHLAPLRPCLSPGGHQTPGV 315
P GW RG+G A+ Q G A P+ P S G +TPG
Sbjct: 187 APQPPPPRGW--RGKGVRAQ------QRGGSGGEGASPS--------PSSSSAG-KTPGT 229
Query: 316 RSRRHGTQAALGACRVGSAGRG 337
SR G+ A G GS G G
Sbjct: 230 GSRNSGSGVAGG----GSGGGG 247
>gi|13376335 hypothetical protein LOC79946 [Homo sapiens]
Length = 257
Score = 37.4 bits (85), Expect = 0.024
Identities = 37/134 (27%), Positives = 42/134 (31%), Gaps = 26/134 (19%)
Query: 204 PQLLPLPLSPPPPLAPSPIPERSLRSLAAWEALGKGGRLGRRCRGGGGERAGRKEGCPLW 263
P L P P P P + R W G+ GR C+ A G PL
Sbjct: 122 PALRPTPRPCAGPAPPPASRDCRCRRPRRWPRAGRRGRRAGACKPSCAGAAWSARGAPLC 181
Query: 264 GW-----GRRGEGAAARAAPPCGQPRELGTLAARPACCHLAPLRPCLSPGGHQTPGVRSR 318
+ G G A AP C P AA +CC R C SP
Sbjct: 182 SYRTSCAGSCGARTAPTPAPTCASPS-----AAASSCCRRR--RACSSP----------- 223
Query: 319 RHGTQAALGACRVG 332
T A GAC G
Sbjct: 224 ---TTAWSGACGAG 234
>gi|169210256 PREDICTED: hypothetical protein [Homo sapiens]
Length = 447
Score = 37.0 bits (84), Expect = 0.031
Identities = 58/223 (26%), Positives = 73/223 (32%), Gaps = 52/223 (23%)
Query: 128 APWPRQGGGRSVRGSAESSL--RASFPFSR-RARGARLQPPAPGKRGRGAATRVFLVGLF 184
AP R G SV + + L +A FP +R R RGA +P L +
Sbjct: 165 APGARSGAAASVAAAGGTRLAQQAPFPAARCRRRGAIRKPLHDVTAAAFIVLVELLFAIT 224
Query: 185 ASPRAAALLGDRSWE------------ARTEPQLLPLPLSPPPPLA-PSPIPERSLRSLA 231
+ RAA+ S AR +P PP L P P+P R+ R+ A
Sbjct: 225 SGERAASAPRQESHNFAKGCAEFYGSGARAQPGGPCWAQGPPGRLPDPIPLPTRAPRTSA 284
Query: 232 AWEALGKGG---------------------------RLGRRCRGGGGERAGRKEGCPLWG 264
+G G R+G R R G G G CP
Sbjct: 285 GLAGVGSGAPGEPAEPGRARAPRSAPSSREPRQTKRRVGSRARAGAGAVTGP---CPAAA 341
Query: 265 WGRRGEGAAARAAPPCGQPRELGTLAARPACCHLAPLRPCLSP 307
G RG + R P G RE P P RP SP
Sbjct: 342 QGARGSWPSPRCLPSDGGARE------APPTSAPHPRRPAGSP 378
>gi|169204930 PREDICTED: hypothetical protein [Homo sapiens]
Length = 373
Score = 37.0 bits (84), Expect = 0.031
Identities = 41/99 (41%), Positives = 42/99 (42%), Gaps = 22/99 (22%)
Query: 137 RSVRGSAESSLRASFPFSRRARGARLQ-----PPAPGK----RGRGAATRV--FLVGLFA 185
R RG A RA RARG Q P APG RGR F G
Sbjct: 278 RPTRGGARGHRRAD----GRARGGCAQLRAGTPSAPGGLQDCRGRQGEENAHPFRSGAPF 333
Query: 186 SPRAAALLGDRSWEARTEPQLLPLPLSPPPP-LAPSPIP 223
SP A RS A QLLPLP PPPP LAP P+P
Sbjct: 334 SPHPHA---SRSTLAA---QLLPLPQPPPPPKLAPPPLP 366
>gi|239750393 PREDICTED: hypothetical protein [Homo sapiens]
Length = 373
Score = 37.0 bits (84), Expect = 0.031
Identities = 41/99 (41%), Positives = 42/99 (42%), Gaps = 22/99 (22%)
Query: 137 RSVRGSAESSLRASFPFSRRARGARLQ-----PPAPGK----RGRGAATRV--FLVGLFA 185
R RG A RA RARG Q P APG RGR F G
Sbjct: 278 RPTRGGARGHRRAD----GRARGGCAQLRAGTPSAPGGLQDCRGRQGEENAHPFRSGAPF 333
Query: 186 SPRAAALLGDRSWEARTEPQLLPLPLSPPPP-LAPSPIP 223
SP A RS A QLLPLP PPPP LAP P+P
Sbjct: 334 SPHPHA---SRSTLAA---QLLPLPQPPPPPKLAPPPLP 366
>gi|239744694 PREDICTED: hypothetical protein [Homo sapiens]
Length = 373
Score = 37.0 bits (84), Expect = 0.031
Identities = 41/99 (41%), Positives = 42/99 (42%), Gaps = 22/99 (22%)
Query: 137 RSVRGSAESSLRASFPFSRRARGARLQ-----PPAPGK----RGRGAATRV--FLVGLFA 185
R RG A RA RARG Q P APG RGR F G
Sbjct: 278 RPTRGGARGHRRAD----GRARGGCAQLRAGTPSAPGGLQDCRGRQGEENAHPFRSGAPF 333
Query: 186 SPRAAALLGDRSWEARTEPQLLPLPLSPPPP-LAPSPIP 223
SP A RS A QLLPLP PPPP LAP P+P
Sbjct: 334 SPHPHA---SRSTLAA---QLLPLPQPPPPPKLAPPPLP 366
>gi|238624195 hypothetical protein LOC221545 isoform 3 [Homo
sapiens]
Length = 496
Score = 37.0 bits (84), Expect = 0.031
Identities = 37/124 (29%), Positives = 47/124 (37%), Gaps = 39/124 (31%)
Query: 219 PSPIPERSLRSLAAWEALGKGGRLGRRCRG-------------GGGERAGRKEGCP---- 261
P P+P +L+ + G GGR R CR G G+ AGR P
Sbjct: 61 PPPLPTCALQRVDRLGVAGAGGRRCRACRARTSVLPGLRAVRRGQGQAAGRVCVAPDSPR 120
Query: 262 -------LWGWGRRGEGAAA---RAAP----PCGQPRELGTLA--------ARPACCHLA 299
L G GR AA R++P P G+P++ LA RP C
Sbjct: 121 LPVPRGDLKGRGREIRSPAAAPSRSSPAQTRPAGRPQQPARLALGERSWQEGRPVCTRFG 180
Query: 300 PLRP 303
PLRP
Sbjct: 181 PLRP 184
>gi|149158690 HLA-B associated transcript-2 [Homo sapiens]
Length = 2157
Score = 37.0 bits (84), Expect = 0.031
Identities = 52/181 (28%), Positives = 68/181 (37%), Gaps = 37/181 (20%)
Query: 156 RARGARLQPPAPGKRGRGAATRVFLVGLFASPRAAALLGDRSWEART--EPQLLPLPLSP 213
R+ G+ + +R RG+ T S + L EA T E L +PL+P
Sbjct: 1088 RSEGSEYEEIPKRRRQRGSET--------GSETHESDLAPSDKEAPTPKEGTLTQVPLAP 1139
Query: 214 PPPLA-PSPIPERSLRSLAAWEALGKGGRL-------GRRCRGGGGERAGRKEGCPLWGW 265
PPP A PSP P R +GGR+ RR RGGG + CP GW
Sbjct: 1140 PPPGAPPSPAPAR---------FTARGGRVFTPRGVPSRRGRGGG---RPPPQVCP--GW 1185
Query: 266 GRRGEGAAARAAPPCGQPRELGTLAARPACCHLAPLRPCLSPGGHQT-----PGVRSRRH 320
+ A + P P L + L+P+ S GG R RRH
Sbjct: 1186 SPPAKSLAPKKPPTGPLPPSKEPLKEKLIPGPLSPVARGGSNGGSNVGMEDGERPRRRRH 1245
Query: 321 G 321
G
Sbjct: 1246 G 1246
Score = 30.0 bits (66), Expect = 3.8
Identities = 53/210 (25%), Positives = 69/210 (32%), Gaps = 37/210 (17%)
Query: 129 PWPRQGGGRSVRGSAESSLRASFPFSRRARGARLQPPAPGKRGRGAATRVFLVGLFASPR 188
P R G GR + S S S P R G L PP P +V +
Sbjct: 1419 PGGRTGPGRGDKRSWPSPKNRSRPPEERPPGLPLPPPPPSSSAVFRLDQVIHSNPAGIQQ 1478
Query: 189 AAALLGDRSWEA-------RTEPQLLPLPLSPPPPLAPSPIPERSLRSLAAWEALGKGGR 241
A A L R R +P L P P P P+R L++ + G
Sbjct: 1479 ALAQLSSRQGSVTAPGGHPRHKPGLPQAPQGPSPRPPTRYEPQRVNSGLSSDPHFEEPGP 1538
Query: 242 LGRRCRGGGGERAG-------RKEGCPLWGWGRRGEGAAARAAPPCGQPRELGTLAARPA 294
+ R G + AG R+E P R+ E + PP P G L ++P
Sbjct: 1539 MVRGVGGTPRDSAGVSPFPPKRRERPP-----RKPELLQEESLPP---PHSSGFLGSKPE 1590
Query: 295 CCHLAPLRPCLSPGGHQTPGVRSRRHGTQA 324
PG P SR GT+A
Sbjct: 1591 -----------GPG----PQAESRDTGTEA 1605
>gi|182507165 thymus expressed gene 3-like [Homo sapiens]
Length = 629
Score = 37.0 bits (84), Expect = 0.031
Identities = 53/202 (26%), Positives = 73/202 (36%), Gaps = 26/202 (12%)
Query: 155 RRARGARLQPP----APGKRGRGAATRVFLVGLF-ASPRAAALLGDRSWEARTEPQLLPL 209
RR R +PP +PG + VG SP A + SWE+ P+
Sbjct: 280 RRQNSVRQRPPDASPSPGSARPAREPSLERVGGHPTSPAALSRAWASSWESEAAPEPAAP 339
Query: 210 PLSPPPPLAPSPIPERSLRSLAAWEALGKG--GRLGRR-----CRGGGGE--------RA 254
P +P PP +P+ + + +A +G GR RR RG E RA
Sbjct: 340 PAAPSPPDSPAEGRLVKAQYIPGAQAATRGLPGRAARRKPPPLTRGRSVEQSPPRERPRA 399
Query: 255 GRKEGCPLWGWGRRGEGAAARAAPPCGQPRELGTLAARPACCHLAPLRPCLSPGGHQTPG 314
+ G GRRG A +A+ + LG +A P+ P P + P
Sbjct: 400 AGRRGRMAEASGRRGSPRARKASRSQSETSLLGRASAVPS----GP--PKYPTAEREEPR 453
Query: 315 VRSRRHGTQAALGACRVGSAGR 336
R G L A GS R
Sbjct: 454 PPRPRRGPAPTLAAQAAGSCRR 475
>gi|40255047 pleckstrin homology domain containing, family H (with
MyTH4 domain) member 3 [Homo sapiens]
Length = 793
Score = 37.0 bits (84), Expect = 0.031
Identities = 48/150 (32%), Positives = 55/150 (36%), Gaps = 24/150 (16%)
Query: 161 RLQPPAPGKRGRG-AATRVFLVGLFASPRAAALLGDRSWEARTEPQLLPLPLSP---PPP 216
R +PP P R AA R+ + SPR DR LLP P P PP
Sbjct: 525 RGRPPPPDDTLRALAALRLQSLHRDFSPRVPLPRLDR---------LLPPPAPPREDPPR 575
Query: 217 LAPSPIPERSLRSLAAWEALGKGGRLGRRCRGGGGERAG--RKEGCPLWGWGRRGEGAAA 274
P P P +L + A W R R RGG G AG +EG G GA
Sbjct: 576 PTPRPPPSAALLAGALWSPGLAKRRAERARRGGAGRTAGSIAREG---------GGGAGT 626
Query: 275 RAAPPCGQPRELGTLAARPACCHLAPLRPC 304
AA G R G A +LA C
Sbjct: 627 AAAVLGGWKRLRGMGRAEAMAAYLALAAQC 656
Database: hs.faa
Posted date: Aug 4, 2009 4:42 PM
Number of letters in database: 18,247,518
Number of sequences in database: 37,866
Lambda K H
0.318 0.136 0.424
Gapped
Lambda K H
0.267 0.0410 0.140
Matrix: BLOSUM62
Gap Penalties: Existence: 11, Extension: 1
Number of Hits to DB: 18,374,943
Number of Sequences: 37866
Number of extensions: 1070623
Number of successful extensions: 9124
Number of sequences better than 10.0: 30
Number of HSP's better than 10.0 without gapping: 81
Number of HSP's successfully gapped in prelim test: 381
Number of HSP's that attempted gapping in prelim test: 8207
Number of HSP's gapped (non-prelim): 1110
length of query: 397
length of database: 18,247,518
effective HSP length: 104
effective length of query: 293
effective length of database: 14,309,454
effective search space: 4192670022
effective search space used: 4192670022
T: 11
A: 40
X1: 16 ( 7.3 bits)
X2: 38 (14.6 bits)
X3: 64 (24.7 bits)
S1: 41 (21.7 bits)
S2: 63 (28.9 bits)
Search results were obtained with NCBI BLAST and RefSeq entries.
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Guide to the Human Genome
Copyright © 2010 by Stewart Scherer. All rights reserved.