APH1B 14911

Name: APH1B	Sequence: fasta or formatted (216aa)		NCBI GI: 224548987
Description: presenilin stabilization factor-like isoform 2		Referenced in: Notch Pathway
Other entries for this name: alt prot [257aa] presenilin stabilization factor-like isoform 1
Composition: Amino acid Percentage Count Longest homopolymer A alanine 10.2 22 2 C cysteine 2.3 5 1 D aspartate 1.9 4 1 E glutamate 2.3 5 1 F phenylalanine 9.7 21 2 G glycine 6.5 14 2 H histidine 0.9 2 1 I isoleucine 9.3 20 2 K lysine 5.1 11 3 L leucine 15.7 34 2 M methionine 2.8 6 1 N asparagine 2.3 5 1 P proline 2.3 5 1 Q glutamine 2.3 5 1 R arginine 3.2 7 1 S serine 6.5 14 2 T threonine 4.2 9 1 V valine 6.0 13 1 W tryptophan 2.3 5 1 Y tyrosine 4.2 9 2			Comparative genomics: Search single species RefSeq proteins at NCBI H. sapiens M. musculus D. rerio C. intestinalis S. purpuratus D. melanogaster C. elegans A. thaliana S. cerevisiae E. coli W3110 A. pernix K1 Search summary Figure data Additional searches of RefSeq proteins at NCBI All Eukaryotes Bacteria Archaea Viruses Primates Mammals Vertebrates
Related human proteins: Protein Relative score Description Self-match 1.000 presenilin stabilization factor-like isoform 2 [Hom... APH1B 0.951 presenilin stabilization factor-like isoform 1 [Homo... APH1A 0.479 anterior pharynx defective 1 homolog A isoform 2 [H... APH1A 0.477 anterior pharynx defective 1 homolog A isoform 1 [H... SEC61A2 0.012 Sec61 alpha form 2 isoform b SEC61A2 0.012 Sec61 alpha form 2 isoform c SEC61A2 0.012 Sec61 alpha form 2 isoform a OR9A4 0.012 olfactory receptor, family 9, subfamily A, member 4 ... SLC7A14 0.010 solute carrier family 7 (cationic amino acid transp... SLC33A1 0.007 acetyl-coenzyme A transporter SEC61A1 0.007 Sec61 alpha 1 subunit AMBP 0.007 alpha-1-microglobulin/bikunin preproprotein Human BLASTP results (used to prepare the table)

Gene descriptions are from NCBI RefSeq. Search results were obtained with NCBI BLAST and RefSeq entries. When identical proteins are present, the self-match may not be listed first in BLASTP output. In such cases, the table above has been reordered to place it first.

See About the Figures for the scoring system used in the figure above right. The same scoring system was used in the table of BLASTP results.