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Search of human proteins with 10864063
BLASTP 2.2.11 [Jun-05-2005]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= gi|10864063 pellino 2 [Homo sapiens]
(420 letters)
Database: hs.faa
37,866 sequences; 18,247,518 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
gi|10864063 pellino 2 [Homo sapiens] 886 0.0
gi|11037063 pellino protein [Homo sapiens] 742 0.0
gi|148612833 pellino 3 alpha isoform 2 [Homo sapiens] 635 0.0
gi|148612798 pellino 3 alpha isoform 1 [Homo sapiens] 621 e-178
gi|239757488 PREDICTED: chromosome 20 open reading frame 95 [Hom... 38 0.020
gi|239752003 PREDICTED: chromosome 20 open reading frame 95 [Hom... 38 0.020
gi|239746488 PREDICTED: Rho GTPase-activating protein 18-like [H... 38 0.020
gi|22212927 nuclear transcription factor, X-box binding 1 isofor... 30 3.1
gi|22212925 nuclear transcription factor, X-box binding 1 isofor... 30 3.1
gi|21361137 nuclear transcription factor, X-box binding 1 isofor... 30 3.1
gi|21237808 SWI/SNF-related matrix-associated actin-dependent re... 30 3.1
gi|21237805 SWI/SNF-related matrix-associated actin-dependent re... 30 3.1
gi|194363725 SWI/SNF-related matrix-associated actin-dependent r... 30 3.1
gi|224548936 hypothetical protein LOC100170229 [Homo sapiens] 30 5.4
gi|91199543 myeloid/lymphoid or mixed-lineage leukemia 5 [Homo s... 29 7.0
gi|33636768 myeloid/lymphoid or mixed-lineage leukemia 5 [Homo s... 29 7.0
gi|152963637 zinc finger protein 787 [Homo sapiens] 29 7.0
gi|14251212 DEAD (Asp-Glu-Ala-Asp) box polypeptide 20 [Homo sapi... 29 9.1
>gi|10864063 pellino 2 [Homo sapiens]
Length = 420
Score = 886 bits (2290), Expect = 0.0
Identities = 420/420 (100%), Positives = 420/420 (100%)
Query: 1 MFSPGQEEHCAPNKEPVKYGELVVLGYNGALPNGDRGRRKSRFALYKRPKANGVKPSTVH 60
MFSPGQEEHCAPNKEPVKYGELVVLGYNGALPNGDRGRRKSRFALYKRPKANGVKPSTVH
Sbjct: 1 MFSPGQEEHCAPNKEPVKYGELVVLGYNGALPNGDRGRRKSRFALYKRPKANGVKPSTVH 60
Query: 61 VISTPQASKAISCKGQHSISYTLSRNQTVVVEYTHDKDTDMFQVGRSTESPIDFVVTDTI 120
VISTPQASKAISCKGQHSISYTLSRNQTVVVEYTHDKDTDMFQVGRSTESPIDFVVTDTI
Sbjct: 61 VISTPQASKAISCKGQHSISYTLSRNQTVVVEYTHDKDTDMFQVGRSTESPIDFVVTDTI 120
Query: 121 SGSQNTDEAQITQSTISRFACRIVCDRNEPYTARIFAAGFDSSKNIFLGEKAAKWKNPDG 180
SGSQNTDEAQITQSTISRFACRIVCDRNEPYTARIFAAGFDSSKNIFLGEKAAKWKNPDG
Sbjct: 121 SGSQNTDEAQITQSTISRFACRIVCDRNEPYTARIFAAGFDSSKNIFLGEKAAKWKNPDG 180
Query: 181 HMDGLTTNGVLVMHPRGGFTEESQPGVWREISVCGDVYTLRETRSAQQRGKLVESETNVL 240
HMDGLTTNGVLVMHPRGGFTEESQPGVWREISVCGDVYTLRETRSAQQRGKLVESETNVL
Sbjct: 181 HMDGLTTNGVLVMHPRGGFTEESQPGVWREISVCGDVYTLRETRSAQQRGKLVESETNVL 240
Query: 241 QDGSLIDLCGATLLWRTADGLFHTPTQKHIEALRQEINAARPQCPVGLNTLAFPSINRKE 300
QDGSLIDLCGATLLWRTADGLFHTPTQKHIEALRQEINAARPQCPVGLNTLAFPSINRKE
Sbjct: 241 QDGSLIDLCGATLLWRTADGLFHTPTQKHIEALRQEINAARPQCPVGLNTLAFPSINRKE 300
Query: 301 VVEEKQPWAYLSCGHVHGYHNWGHRSDTEANERECPMCRTVGPYVPLWLGCEAGFYVDAG 360
VVEEKQPWAYLSCGHVHGYHNWGHRSDTEANERECPMCRTVGPYVPLWLGCEAGFYVDAG
Sbjct: 301 VVEEKQPWAYLSCGHVHGYHNWGHRSDTEANERECPMCRTVGPYVPLWLGCEAGFYVDAG 360
Query: 361 PPTHAFTPCGHVCSEKSAKYWSQIPLPHGTHAFHAACPFCATQLVGEQNCIKLIFQGPID 420
PPTHAFTPCGHVCSEKSAKYWSQIPLPHGTHAFHAACPFCATQLVGEQNCIKLIFQGPID
Sbjct: 361 PPTHAFTPCGHVCSEKSAKYWSQIPLPHGTHAFHAACPFCATQLVGEQNCIKLIFQGPID 420
>gi|11037063 pellino protein [Homo sapiens]
Length = 418
Score = 742 bits (1915), Expect = 0.0
Identities = 342/420 (81%), Positives = 380/420 (90%), Gaps = 2/420 (0%)
Query: 1 MFSPGQEEHCAPNKEPVKYGELVVLGYNGALPNGDRGRRKSRFALYKRPKANGVKPSTVH 60
MFSP QE H P+K PVKYGEL+VLGYNG+LPNGDRGRRKSRFAL+KRPKANGVKPSTVH
Sbjct: 1 MFSPDQENH--PSKAPVKYGELIVLGYNGSLPNGDRGRRKSRFALFKRPKANGVKPSTVH 58
Query: 61 VISTPQASKAISCKGQHSISYTLSRNQTVVVEYTHDKDTDMFQVGRSTESPIDFVVTDTI 120
+ TPQA+KAIS K QHSISYTLSR QTVVVEYTHD +TDMFQ+GRSTESPIDFVVTDT+
Sbjct: 59 IACTPQAAKAISNKDQHSISYTLSRAQTVVVEYTHDSNTDMFQIGRSTESPIDFVVTDTV 118
Query: 121 SGSQNTDEAQITQSTISRFACRIVCDRNEPYTARIFAAGFDSSKNIFLGEKAAKWKNPDG 180
GSQ+ + Q QSTISRFACRI+C+RN P+TARI+AAGFDSSKNIFLGEKAAKWK DG
Sbjct: 119 PGSQSNSDTQSVQSTISRFACRIICERNPPFTARIYAAGFDSSKNIFLGEKAAKWKTSDG 178
Query: 181 HMDGLTTNGVLVMHPRGGFTEESQPGVWREISVCGDVYTLRETRSAQQRGKLVESETNVL 240
MDGLTTNGVLVMHPR GFTE+S+PG+WREISVCG+V++LRETRSAQQRGK+VE ETN L
Sbjct: 179 QMDGLTTNGVLVMHPRNGFTEDSKPGIWREISVCGNVFSLRETRSAQQRGKMVEIETNQL 238
Query: 241 QDGSLIDLCGATLLWRTADGLFHTPTQKHIEALRQEINAARPQCPVGLNTLAFPSINRKE 300
QDGSLIDLCGATLLWRTA+GL HTPT KH+EALRQEINAARPQCPVG NTLAFPS+ RK+
Sbjct: 239 QDGSLIDLCGATLLWRTAEGLSHTPTVKHLEALRQEINAARPQCPVGFNTLAFPSMKRKD 298
Query: 301 VVEEKQPWAYLSCGHVHGYHNWGHRSDTEANERECPMCRTVGPYVPLWLGCEAGFYVDAG 360
VV+EKQPW YL+CGHVHGYHNWG++ + + +RECPMCR+VGPYVPLWLGCEAGFYVDAG
Sbjct: 299 VVDEKQPWVYLNCGHVHGYHNWGNKEERDGKDRECPMCRSVGPYVPLWLGCEAGFYVDAG 358
Query: 361 PPTHAFTPCGHVCSEKSAKYWSQIPLPHGTHAFHAACPFCATQLVGEQNCIKLIFQGPID 420
PPTHAF+PCGHVCSEK+ YWSQIPLPHGTH FHAACPFCA QL GEQ I+LIFQGP+D
Sbjct: 359 PPTHAFSPCGHVCSEKTTAYWSQIPLPHGTHTFHAACPFCAHQLAGEQGYIRLIFQGPLD 418
>gi|148612833 pellino 3 alpha isoform 2 [Homo sapiens]
Length = 445
Score = 635 bits (1637), Expect = 0.0
Identities = 298/419 (71%), Positives = 342/419 (81%), Gaps = 4/419 (0%)
Query: 3 SPGQEEHCAPNKEPVKYGELVVLGYNGALPNGDRGRRKSRFALYKRPKANGVKPSTVHVI 62
SPG++ P +EP+KYGEL+VLGYNG L +GD+GRR+SR AL +R ANGVKP +H I
Sbjct: 30 SPGEDAQ--PGEEPIKYGELIVLGYNGCLASGDKGRRRSRLALSRRSHANGVKPDVMHHI 87
Query: 63 STPQASKAISCKGQHSISYTLSRNQTVVVEYTHDKDTDMFQVGRSTESPIDFVVTDTISG 122
STP SKA+S +GQHSISYTLSR+ +V+VEYTHD DTDMFQ+GRSTE+ IDFVVTDT G
Sbjct: 88 STPLVSKALSNRGQHSISYTLSRSHSVIVEYTHDSDTDMFQIGRSTENMIDFVVTDTSPG 147
Query: 123 SQNTDEAQITQSTISRFACRIVCDRNEPYTARIFAAGFDSSKNIFLGEKAAKWKNPDGHM 182
E QSTISR+ACRI+CDR PYTARI+AAGFD+S NIFLGE+AAKW+ PDG M
Sbjct: 148 G-GAAEGPSAQSTISRYACRILCDRRPPYTARIYAAGFDASSNIFLGERAAKWRTPDGLM 206
Query: 183 DGLTTNGVLVMHPRGGFTEESQPGVWREISVCGDVYTLRETRSAQQRGKLVESETNVLQD 242
DGLTTNGVLVMHP GGF+E+S PGVWREISVCG+VYTLR++RSAQQRGKLVE+E+NVLQD
Sbjct: 207 DGLTTNGVLVMHPAGGFSEDSAPGVWREISVCGNVYTLRDSRSAQQRGKLVENESNVLQD 266
Query: 243 GSLIDLCGATLLWRTADGLFHTPTQKHIEALRQEINAARPQCPVGLNTLAFPSINRKEVV 302
GSLIDLCGATLLWRT GL PT K +EA RQE NAARPQCPVGL+TLAFPS R
Sbjct: 267 GSLIDLCGATLLWRTPAGLLRAPTLKQLEAQRQEANAARPQCPVGLSTLAFPSPARGRTA 326
Query: 303 EEK-QPWAYLSCGHVHGYHNWGHRSDTEANERECPMCRTVGPYVPLWLGCEAGFYVDAGP 361
+K QPW Y+ CGHVHGYH WG R + ERECP+CR VGPYVPLWLG EAG +D GP
Sbjct: 327 PDKQQPWVYVRCGHVHGYHGWGCRRERGPQERECPLCRLVGPYVPLWLGQEAGLCLDPGP 386
Query: 362 PTHAFTPCGHVCSEKSAKYWSQIPLPHGTHAFHAACPFCATQLVGEQNCIKLIFQGPID 420
P+HAF PCGHVCSEK+A+YW+Q PLPHGTHAFHAACPFC L GE C++LIFQGP+D
Sbjct: 387 PSHAFAPCGHVCSEKTARYWAQTPLPHGTHAFHAACPFCGAWLTGEHGCVRLIFQGPLD 445
>gi|148612798 pellino 3 alpha isoform 1 [Homo sapiens]
Length = 469
Score = 621 bits (1602), Expect = e-178
Identities = 298/443 (67%), Positives = 342/443 (77%), Gaps = 28/443 (6%)
Query: 3 SPGQEEHCAPNKEPVKYGELVVLG------------------------YNGALPNGDRGR 38
SPG++ P +EP+KYGEL+VLG YNG L +GD+GR
Sbjct: 30 SPGEDAQ--PGEEPIKYGELIVLGCCEEGGEETEAQRGEVTGPRAHSCYNGCLASGDKGR 87
Query: 39 RKSRFALYKRPKANGVKPSTVHVISTPQASKAISCKGQHSISYTLSRNQTVVVEYTHDKD 98
R+SR AL +R ANGVKP +H ISTP SKA+S +GQHSISYTLSR+ +V+VEYTHD D
Sbjct: 88 RRSRLALSRRSHANGVKPDVMHHISTPLVSKALSNRGQHSISYTLSRSHSVIVEYTHDSD 147
Query: 99 TDMFQVGRSTESPIDFVVTDTISGSQNTDEAQITQSTISRFACRIVCDRNEPYTARIFAA 158
TDMFQ+GRSTE+ IDFVVTDT G E QSTISR+ACRI+CDR PYTARI+AA
Sbjct: 148 TDMFQIGRSTENMIDFVVTDTSPGG-GAAEGPSAQSTISRYACRILCDRRPPYTARIYAA 206
Query: 159 GFDSSKNIFLGEKAAKWKNPDGHMDGLTTNGVLVMHPRGGFTEESQPGVWREISVCGDVY 218
GFD+S NIFLGE+AAKW+ PDG MDGLTTNGVLVMHP GGF+E+S PGVWREISVCG+VY
Sbjct: 207 GFDASSNIFLGERAAKWRTPDGLMDGLTTNGVLVMHPAGGFSEDSAPGVWREISVCGNVY 266
Query: 219 TLRETRSAQQRGKLVESETNVLQDGSLIDLCGATLLWRTADGLFHTPTQKHIEALRQEIN 278
TLR++RSAQQRGKLVE+E+NVLQDGSLIDLCGATLLWRT GL PT K +EA RQE N
Sbjct: 267 TLRDSRSAQQRGKLVENESNVLQDGSLIDLCGATLLWRTPAGLLRAPTLKQLEAQRQEAN 326
Query: 279 AARPQCPVGLNTLAFPSINRKEVVEEK-QPWAYLSCGHVHGYHNWGHRSDTEANERECPM 337
AARPQCPVGL+TLAFPS R +K QPW Y+ CGHVHGYH WG R + ERECP+
Sbjct: 327 AARPQCPVGLSTLAFPSPARGRTAPDKQQPWVYVRCGHVHGYHGWGCRRERGPQERECPL 386
Query: 338 CRTVGPYVPLWLGCEAGFYVDAGPPTHAFTPCGHVCSEKSAKYWSQIPLPHGTHAFHAAC 397
CR VGPYVPLWLG EAG +D GPP+HAF PCGHVCSEK+A+YW+Q PLPHGTHAFHAAC
Sbjct: 387 CRLVGPYVPLWLGQEAGLCLDPGPPSHAFAPCGHVCSEKTARYWAQTPLPHGTHAFHAAC 446
Query: 398 PFCATQLVGEQNCIKLIFQGPID 420
PFC L GE C++LIFQGP+D
Sbjct: 447 PFCGAWLTGEHGCVRLIFQGPLD 469
>gi|239757488 PREDICTED: chromosome 20 open reading frame 95 [Homo
sapiens]
Length = 622
Score = 37.7 bits (86), Expect = 0.020
Identities = 32/106 (30%), Positives = 43/106 (40%), Gaps = 9/106 (8%)
Query: 182 MDGLTTNGVLVMHPRG------GFTEESQPGVWREISVCGDVYTLRETRSAQQRGKLV-- 233
MD L +L +HP G G S G W E+ LRE S G+L
Sbjct: 1 MDQLPQKNLLRLHPAGSAGCSTGVESSSMDGFWMEVEQIQQRDELREEDSGGNEGQLPEE 60
Query: 234 -ESETNVLQDGSLIDLCGATLLWRTADGLFHTPTQKHIEALRQEIN 278
E+E+ LQD L L G L L T TQ + A+ + ++
Sbjct: 61 GEAESQWLQDTGLSGLLGGLGLDGDHQELLSTLTQTQVAAVCRRLD 106
>gi|239752003 PREDICTED: chromosome 20 open reading frame 95 [Homo
sapiens]
Length = 622
Score = 37.7 bits (86), Expect = 0.020
Identities = 32/106 (30%), Positives = 43/106 (40%), Gaps = 9/106 (8%)
Query: 182 MDGLTTNGVLVMHPRG------GFTEESQPGVWREISVCGDVYTLRETRSAQQRGKLV-- 233
MD L +L +HP G G S G W E+ LRE S G+L
Sbjct: 1 MDQLPQKNLLRLHPAGSAGCSTGVESSSMDGFWMEVEQIQQRDELREEDSGGNEGQLPEE 60
Query: 234 -ESETNVLQDGSLIDLCGATLLWRTADGLFHTPTQKHIEALRQEIN 278
E+E+ LQD L L G L L T TQ + A+ + ++
Sbjct: 61 GEAESQWLQDTGLSGLLGGLGLDGDHQELLSTLTQTQVAAVCRRLD 106
>gi|239746488 PREDICTED: Rho GTPase-activating protein 18-like [Homo
sapiens]
Length = 622
Score = 37.7 bits (86), Expect = 0.020
Identities = 32/106 (30%), Positives = 43/106 (40%), Gaps = 9/106 (8%)
Query: 182 MDGLTTNGVLVMHPRG------GFTEESQPGVWREISVCGDVYTLRETRSAQQRGKLV-- 233
MD L +L +HP G G S G W E+ LRE S G+L
Sbjct: 1 MDQLPQKNLLRLHPAGSAGCSTGVESSSMDGFWMEVEQIQQRDELREEDSGGNEGQLPEE 60
Query: 234 -ESETNVLQDGSLIDLCGATLLWRTADGLFHTPTQKHIEALRQEIN 278
E+E+ LQD L L G L L T TQ + A+ + ++
Sbjct: 61 GEAESQWLQDTGLSGLLGGLGLDGDHQELLSTLTQTQVAAVCRRLD 106
>gi|22212927 nuclear transcription factor, X-box binding 1 isoform 3
[Homo sapiens]
Length = 833
Score = 30.4 bits (67), Expect = 3.1
Identities = 29/120 (24%), Positives = 41/120 (34%), Gaps = 12/120 (10%)
Query: 300 EVVEEKQP-WAYLSCGHVHGYH---NWGHRSDTEANERE---CPMCRTVGPYVPLWLGCE 352
E+V P W+ SC HV + W ++A+ + CP C+ V +VP C
Sbjct: 363 ELVRVTAPVWSCQSCYHVFHLNCIKKWARSPASQADGQSGWRCPACQNVSAHVPNTYTCF 422
Query: 353 AGFYVDAGPPTHAFTPCGHVCSEKSAKYWSQIPLPHGTH--AFHAACPFCATQLVGEQNC 410
G P + H C E K PH + CP C + C
Sbjct: 423 CG---KVKNPEWSRNEIPHSCGEVCRKKQPGQDCPHSCNLLCHPGPCPPCPAFMTKTCEC 479
>gi|22212925 nuclear transcription factor, X-box binding 1 isoform 2
[Homo sapiens]
Length = 1024
Score = 30.4 bits (67), Expect = 3.1
Identities = 29/120 (24%), Positives = 41/120 (34%), Gaps = 12/120 (10%)
Query: 300 EVVEEKQP-WAYLSCGHVHGYH---NWGHRSDTEANERE---CPMCRTVGPYVPLWLGCE 352
E+V P W+ SC HV + W ++A+ + CP C+ V +VP C
Sbjct: 363 ELVRVTAPVWSCQSCYHVFHLNCIKKWARSPASQADGQSGWRCPACQNVSAHVPNTYTCF 422
Query: 353 AGFYVDAGPPTHAFTPCGHVCSEKSAKYWSQIPLPHGTH--AFHAACPFCATQLVGEQNC 410
G P + H C E K PH + CP C + C
Sbjct: 423 CG---KVKNPEWSRNEIPHSCGEVCRKKQPGQDCPHSCNLLCHPGPCPPCPAFMTKTCEC 479
>gi|21361137 nuclear transcription factor, X-box binding 1 isoform 1
[Homo sapiens]
Length = 1120
Score = 30.4 bits (67), Expect = 3.1
Identities = 29/120 (24%), Positives = 41/120 (34%), Gaps = 12/120 (10%)
Query: 300 EVVEEKQP-WAYLSCGHVHGYH---NWGHRSDTEANERE---CPMCRTVGPYVPLWLGCE 352
E+V P W+ SC HV + W ++A+ + CP C+ V +VP C
Sbjct: 363 ELVRVTAPVWSCQSCYHVFHLNCIKKWARSPASQADGQSGWRCPACQNVSAHVPNTYTCF 422
Query: 353 AGFYVDAGPPTHAFTPCGHVCSEKSAKYWSQIPLPHGTH--AFHAACPFCATQLVGEQNC 410
G P + H C E K PH + CP C + C
Sbjct: 423 CG---KVKNPEWSRNEIPHSCGEVCRKKQPGQDCPHSCNLLCHPGPCPPCPAFMTKTCEC 479
>gi|21237808 SWI/SNF-related matrix-associated actin-dependent
regulator of chromatin c2 isoform b [Homo sapiens]
Length = 1130
Score = 30.4 bits (67), Expect = 3.1
Identities = 41/156 (26%), Positives = 65/156 (41%), Gaps = 26/156 (16%)
Query: 35 DRGRRKSRFALYKRPKANGVKPSTVHVISTPQASKAISCKGQHSISYTLSRNQTVVVEYT 94
D RR + YK+ K + PS TP+A K + KG S YT S+ E
Sbjct: 285 DSDRRDKKGGNYKKRKRSP-SPSP-----TPEAKKKNAKKGP-STPYTKSKRGHREEEQ- 336
Query: 95 HDKDTDMFQVGRSTESPI----DFVVTDTISGSQNTDEAQITQSTISRFACRIVCDRNEP 150
D DM + SP+ + + T++ ++++ A + T++ D +E
Sbjct: 337 EDLTKDMDE-----PSPVPNVEEVTLPKTVNTKKDSESAPVKGGTMT--------DLDEQ 383
Query: 151 YTARIFAAGFDSSKNIFLGEKAAKWKNPDGHMDGLT 186
+ G D +N G K + KNPD H D +T
Sbjct: 384 EDESMETTGKDEDENS-TGNKGEQTKNPDLHEDNVT 418
>gi|21237805 SWI/SNF-related matrix-associated actin-dependent
regulator of chromatin c2 isoform a [Homo sapiens]
Length = 1214
Score = 30.4 bits (67), Expect = 3.1
Identities = 41/156 (26%), Positives = 65/156 (41%), Gaps = 26/156 (16%)
Query: 35 DRGRRKSRFALYKRPKANGVKPSTVHVISTPQASKAISCKGQHSISYTLSRNQTVVVEYT 94
D RR + YK+ K + PS TP+A K + KG S YT S+ E
Sbjct: 285 DSDRRDKKGGNYKKRKRSP-SPSP-----TPEAKKKNAKKGP-STPYTKSKRGHREEEQ- 336
Query: 95 HDKDTDMFQVGRSTESPI----DFVVTDTISGSQNTDEAQITQSTISRFACRIVCDRNEP 150
D DM + SP+ + + T++ ++++ A + T++ D +E
Sbjct: 337 EDLTKDMDE-----PSPVPNVEEVTLPKTVNTKKDSESAPVKGGTMT--------DLDEQ 383
Query: 151 YTARIFAAGFDSSKNIFLGEKAAKWKNPDGHMDGLT 186
+ G D +N G K + KNPD H D +T
Sbjct: 384 EDESMETTGKDEDENS-TGNKGEQTKNPDLHEDNVT 418
>gi|194363725 SWI/SNF-related matrix-associated actin-dependent
regulator of chromatin c2 isoform c [Homo sapiens]
Length = 1152
Score = 30.4 bits (67), Expect = 3.1
Identities = 41/156 (26%), Positives = 65/156 (41%), Gaps = 26/156 (16%)
Query: 35 DRGRRKSRFALYKRPKANGVKPSTVHVISTPQASKAISCKGQHSISYTLSRNQTVVVEYT 94
D RR + YK+ K + PS TP+A K + KG S YT S+ E
Sbjct: 285 DSDRRDKKGGNYKKRKRSP-SPSP-----TPEAKKKNAKKGP-STPYTKSKRGHREEEQ- 336
Query: 95 HDKDTDMFQVGRSTESPI----DFVVTDTISGSQNTDEAQITQSTISRFACRIVCDRNEP 150
D DM + SP+ + + T++ ++++ A + T++ D +E
Sbjct: 337 EDLTKDMDE-----PSPVPNVEEVTLPKTVNTKKDSESAPVKGGTMT--------DLDEQ 383
Query: 151 YTARIFAAGFDSSKNIFLGEKAAKWKNPDGHMDGLT 186
+ G D +N G K + KNPD H D +T
Sbjct: 384 EDESMETTGKDEDENS-TGNKGEQTKNPDLHEDNVT 418
>gi|224548936 hypothetical protein LOC100170229 [Homo sapiens]
Length = 715
Score = 29.6 bits (65), Expect = 5.4
Identities = 35/113 (30%), Positives = 52/113 (46%), Gaps = 13/113 (11%)
Query: 32 PNGDRGRRKSRFALYKRPKANGVKPSTVHVISTPQASKAISCKGQHSISYTLSRNQTVVV 91
P+ +R RR+SR + +R + P+ S P+AS S + HS S T S+
Sbjct: 575 PSKERERRQSRSSSEERDHSRSRSPNKQSGYSRPRAS---SKEKAHSRSRTPSKEGNHSQ 631
Query: 92 EYTHDKDTDMFQ--VGRSTE---SPIDFVVTDTISGSQNTDEAQITQSTISRF 139
T K++D Q V RS + SP T T S SQN ++ + + S F
Sbjct: 632 SRTSSKESDPSQSTVPRSPDWKRSP-----TRTSSLSQNRTPSKTSSHSPSTF 679
>gi|91199543 myeloid/lymphoid or mixed-lineage leukemia 5 [Homo
sapiens]
Length = 1858
Score = 29.3 bits (64), Expect = 7.0
Identities = 16/47 (34%), Positives = 21/47 (44%)
Query: 362 PTHAFTPCGHVCSEKSAKYWSQIPLPHGTHAFHAACPFCATQLVGEQ 408
P HA TP H+ S+ + + P P G H P +T L G Q
Sbjct: 1658 PVHAVTPGSHIHSQTAGHHLPPPPPPPGPAPHHHPPPHPSTGLQGLQ 1704
>gi|33636768 myeloid/lymphoid or mixed-lineage leukemia 5 [Homo
sapiens]
Length = 1858
Score = 29.3 bits (64), Expect = 7.0
Identities = 16/47 (34%), Positives = 21/47 (44%)
Query: 362 PTHAFTPCGHVCSEKSAKYWSQIPLPHGTHAFHAACPFCATQLVGEQ 408
P HA TP H+ S+ + + P P G H P +T L G Q
Sbjct: 1658 PVHAVTPGSHIHSQTAGHHLPPPPPPPGPAPHHHPPPHPSTGLQGLQ 1704
>gi|152963637 zinc finger protein 787 [Homo sapiens]
Length = 382
Score = 29.3 bits (64), Expect = 7.0
Identities = 16/46 (34%), Positives = 22/46 (47%), Gaps = 4/46 (8%)
Query: 359 AGPPTHAFTPCGHVCSE--KSAKYWSQIPLPHGTHAFHA--ACPFC 400
AGPP P ++C+E KS +WS++ TH AC C
Sbjct: 54 AGPPPRPRPPAPYICNECGKSFSHWSKLTRHQRTHTGERPNACADC 99
>gi|14251212 DEAD (Asp-Glu-Ala-Asp) box polypeptide 20 [Homo
sapiens]
Length = 824
Score = 28.9 bits (63), Expect = 9.1
Identities = 26/99 (26%), Positives = 40/99 (40%), Gaps = 9/99 (9%)
Query: 49 PKANGVKPSTVHVISTPQASKAISCKGQHSISYTLSR---NQTVVVEYTHDKDTDMFQVG 105
P G+K V S P A K K QH + SR NQ +V H + + +
Sbjct: 271 PSLIGLKQYYKVVNSYPLAHKVFEEKTQH-LQELFSRIPFNQALVFSNLHSRAQHLADIL 329
Query: 106 RSTESPIDFVVTDTISGSQNTDEAQITQSTISRFACRIV 144
S P + ISG+ N ++ + + F CR++
Sbjct: 330 SSKGFP-----AECISGNMNQNQRLDAMAKLKHFHCRVL 363
Database: hs.faa
Posted date: Aug 4, 2009 4:42 PM
Number of letters in database: 18,247,518
Number of sequences in database: 37,866
Lambda K H
0.318 0.134 0.427
Gapped
Lambda K H
0.267 0.0410 0.140
Matrix: BLOSUM62
Gap Penalties: Existence: 11, Extension: 1
Number of Hits to DB: 17,913,136
Number of Sequences: 37866
Number of extensions: 821734
Number of successful extensions: 1625
Number of sequences better than 10.0: 18
Number of HSP's better than 10.0 without gapping: 6
Number of HSP's successfully gapped in prelim test: 12
Number of HSP's that attempted gapping in prelim test: 1605
Number of HSP's gapped (non-prelim): 24
length of query: 420
length of database: 18,247,518
effective HSP length: 105
effective length of query: 315
effective length of database: 14,271,588
effective search space: 4495550220
effective search space used: 4495550220
T: 11
A: 40
X1: 16 ( 7.3 bits)
X2: 38 (14.6 bits)
X3: 64 (24.7 bits)
S1: 41 (21.7 bits)
S2: 63 (28.9 bits)
Search results were obtained with NCBI BLAST and RefSeq entries.
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Guide to the Human Genome
Copyright © 2010 by Stewart Scherer. All rights reserved.