BLASTP 2.2.11 [Jun-05-2005] Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Query= gi|239748400 PREDICTED: hypothetical protein XP_002346661 [Homo sapiens] (563 letters) Database: hs.faa 37,866 sequences; 18,247,518 total letters Searching..................................................done Score E Sequences producing significant alignments: (bits) Value gi|239753837 PREDICTED: similar to Uncharacterized protein LP905... 1179 0.0 gi|239748400 PREDICTED: hypothetical protein XP_002346661 [Homo ... 1179 0.0 gi|239742330 PREDICTED: hypothetical protein XP_002342492 [Homo ... 1179 0.0 gi|46485773 syncytin 2 [Homo sapiens] 73 8e-13 gi|195963433 syncytin precursor [Homo sapiens] 56 8e-08 gi|48949851 syncytin precursor [Homo sapiens] 56 8e-08 gi|145651814 endogenous retroviral sequence 3 [Homo sapiens] 45 1e-04 gi|157057547 Fc receptor-like 6 [Homo sapiens] 33 0.91 gi|109659839 solute carrier family 5 (sodium/glucose cotransport... 32 1.2 gi|109659836 solute carrier family 5 (sodium/glucose cotransport... 32 1.2 gi|226443002 jumonji, AT rich interactive domain 1D isoform 3 [H... 32 1.6 gi|33356560 jumonji, AT rich interactive domain 1D isoform 2 [Ho... 32 1.6 gi|226442991 jumonji, AT rich interactive domain 1D isoform 1 [H... 32 1.6 gi|31542280 hypothetical protein LOC221481 [Homo sapiens] 32 1.6 gi|154350244 hypothetical protein LOC79632 isoform 2 [Homo sapiens] 31 2.6 gi|154350226 hypothetical protein LOC79632 isoform 1 [Homo sapiens] 31 2.6 gi|165932370 FAT tumor suppressor homolog 4 [Homo sapiens] 30 4.5 gi|50659091 scavenger receptor cysteine-rich type 1 precursor [H... 30 4.5 gi|223633941 hypothetical protein LOC389730 [Homo sapiens] 30 7.7 gi|91206406 hypothetical protein LOC642265 [Homo sapiens] 30 7.7 gi|51243032 oxysterol-binding protein-like protein 8 isoform b [... 30 7.7 gi|18079218 oxysterol-binding protein-like protein 8 isoform a [... 30 7.7 gi|133892686 hypothetical protein LOC727830 [Homo sapiens] 30 7.7 gi|146231958 hypothetical protein LOC647060 [Homo sapiens] 30 7.7 >gi|239753837 PREDICTED: similar to Uncharacterized protein LP9056 [Homo sapiens] Length = 563 Score = 1179 bits (3050), Expect = 0.0 Identities = 563/563 (100%), Positives = 563/563 (100%) Query: 1 MGSLSNYALLQLTLTAFLTILVQPQHLLAPVFRTLSILTNQSNCWLCEHLDNAEQPELVF 60 MGSLSNYALLQLTLTAFLTILVQPQHLLAPVFRTLSILTNQSNCWLCEHLDNAEQPELVF Sbjct: 1 MGSLSNYALLQLTLTAFLTILVQPQHLLAPVFRTLSILTNQSNCWLCEHLDNAEQPELVF 60 Query: 61 VPASASTWWTYSGQWMYERVWYPQAEVQNHSTSSYRKVTWHWEASMEAQGLSFAQVRLLE 120 VPASASTWWTYSGQWMYERVWYPQAEVQNHSTSSYRKVTWHWEASMEAQGLSFAQVRLLE Sbjct: 61 VPASASTWWTYSGQWMYERVWYPQAEVQNHSTSSYRKVTWHWEASMEAQGLSFAQVRLLE 120 Query: 121 GNFSLCVENKNGSGPFLGNIPKQYCNQILWFDSTDGTFMPSIDVTNESRNDDDDTSVCLG 180 GNFSLCVENKNGSGPFLGNIPKQYCNQILWFDSTDGTFMPSIDVTNESRNDDDDTSVCLG Sbjct: 121 GNFSLCVENKNGSGPFLGNIPKQYCNQILWFDSTDGTFMPSIDVTNESRNDDDDTSVCLG 180 Query: 181 TRQCSWFAGCTNRTWNSSAVPLIGLPNTQDYKWVDRNSGLTWSGNDTCLYSCQNQTKGLL 240 TRQCSWFAGCTNRTWNSSAVPLIGLPNTQDYKWVDRNSGLTWSGNDTCLYSCQNQTKGLL Sbjct: 181 TRQCSWFAGCTNRTWNSSAVPLIGLPNTQDYKWVDRNSGLTWSGNDTCLYSCQNQTKGLL 240 Query: 241 YQLFRNLFCSYGLTEAHGKWRCADASITNDKGHDGHRTPTWWLTGSNLTLSVNNSGLFFL 300 YQLFRNLFCSYGLTEAHGKWRCADASITNDKGHDGHRTPTWWLTGSNLTLSVNNSGLFFL Sbjct: 241 YQLFRNLFCSYGLTEAHGKWRCADASITNDKGHDGHRTPTWWLTGSNLTLSVNNSGLFFL 300 Query: 301 CGNGVYKGFPPKWSGRCGLGYLVPSLTRYLTLNASQITNLRSFIHKVTPHRCTQGDTDNP 360 CGNGVYKGFPPKWSGRCGLGYLVPSLTRYLTLNASQITNLRSFIHKVTPHRCTQGDTDNP Sbjct: 301 CGNGVYKGFPPKWSGRCGLGYLVPSLTRYLTLNASQITNLRSFIHKVTPHRCTQGDTDNP 360 Query: 361 PLYCNPKDNSTIRALFPSLGTYDLEKAILNISKAMEQEFSATKQTLEAHQSKVSSLASAS 420 PLYCNPKDNSTIRALFPSLGTYDLEKAILNISKAMEQEFSATKQTLEAHQSKVSSLASAS Sbjct: 361 PLYCNPKDNSTIRALFPSLGTYDLEKAILNISKAMEQEFSATKQTLEAHQSKVSSLASAS 420 Query: 421 RKDHVLDIPTTQRQTACGTVGKQCCLYINYSEEIKSNIQRLHEASENLKNVPLLDWQGIF 480 RKDHVLDIPTTQRQTACGTVGKQCCLYINYSEEIKSNIQRLHEASENLKNVPLLDWQGIF Sbjct: 421 RKDHVLDIPTTQRQTACGTVGKQCCLYINYSEEIKSNIQRLHEASENLKNVPLLDWQGIF 480 Query: 481 AKVGDWFRSWGYVLLIVLFCLFIFVLIYVRVFRKSRRSLNSQPLNLALSPQQSAQLLVSE 540 AKVGDWFRSWGYVLLIVLFCLFIFVLIYVRVFRKSRRSLNSQPLNLALSPQQSAQLLVSE Sbjct: 481 AKVGDWFRSWGYVLLIVLFCLFIFVLIYVRVFRKSRRSLNSQPLNLALSPQQSAQLLVSE 540 Query: 541 TSCQVSNRAMKGLTTHQYDTSLL 563 TSCQVSNRAMKGLTTHQYDTSLL Sbjct: 541 TSCQVSNRAMKGLTTHQYDTSLL 563 >gi|239748400 PREDICTED: hypothetical protein XP_002346661 [Homo sapiens] Length = 563 Score = 1179 bits (3050), Expect = 0.0 Identities = 563/563 (100%), Positives = 563/563 (100%) Query: 1 MGSLSNYALLQLTLTAFLTILVQPQHLLAPVFRTLSILTNQSNCWLCEHLDNAEQPELVF 60 MGSLSNYALLQLTLTAFLTILVQPQHLLAPVFRTLSILTNQSNCWLCEHLDNAEQPELVF Sbjct: 1 MGSLSNYALLQLTLTAFLTILVQPQHLLAPVFRTLSILTNQSNCWLCEHLDNAEQPELVF 60 Query: 61 VPASASTWWTYSGQWMYERVWYPQAEVQNHSTSSYRKVTWHWEASMEAQGLSFAQVRLLE 120 VPASASTWWTYSGQWMYERVWYPQAEVQNHSTSSYRKVTWHWEASMEAQGLSFAQVRLLE Sbjct: 61 VPASASTWWTYSGQWMYERVWYPQAEVQNHSTSSYRKVTWHWEASMEAQGLSFAQVRLLE 120 Query: 121 GNFSLCVENKNGSGPFLGNIPKQYCNQILWFDSTDGTFMPSIDVTNESRNDDDDTSVCLG 180 GNFSLCVENKNGSGPFLGNIPKQYCNQILWFDSTDGTFMPSIDVTNESRNDDDDTSVCLG Sbjct: 121 GNFSLCVENKNGSGPFLGNIPKQYCNQILWFDSTDGTFMPSIDVTNESRNDDDDTSVCLG 180 Query: 181 TRQCSWFAGCTNRTWNSSAVPLIGLPNTQDYKWVDRNSGLTWSGNDTCLYSCQNQTKGLL 240 TRQCSWFAGCTNRTWNSSAVPLIGLPNTQDYKWVDRNSGLTWSGNDTCLYSCQNQTKGLL Sbjct: 181 TRQCSWFAGCTNRTWNSSAVPLIGLPNTQDYKWVDRNSGLTWSGNDTCLYSCQNQTKGLL 240 Query: 241 YQLFRNLFCSYGLTEAHGKWRCADASITNDKGHDGHRTPTWWLTGSNLTLSVNNSGLFFL 300 YQLFRNLFCSYGLTEAHGKWRCADASITNDKGHDGHRTPTWWLTGSNLTLSVNNSGLFFL Sbjct: 241 YQLFRNLFCSYGLTEAHGKWRCADASITNDKGHDGHRTPTWWLTGSNLTLSVNNSGLFFL 300 Query: 301 CGNGVYKGFPPKWSGRCGLGYLVPSLTRYLTLNASQITNLRSFIHKVTPHRCTQGDTDNP 360 CGNGVYKGFPPKWSGRCGLGYLVPSLTRYLTLNASQITNLRSFIHKVTPHRCTQGDTDNP Sbjct: 301 CGNGVYKGFPPKWSGRCGLGYLVPSLTRYLTLNASQITNLRSFIHKVTPHRCTQGDTDNP 360 Query: 361 PLYCNPKDNSTIRALFPSLGTYDLEKAILNISKAMEQEFSATKQTLEAHQSKVSSLASAS 420 PLYCNPKDNSTIRALFPSLGTYDLEKAILNISKAMEQEFSATKQTLEAHQSKVSSLASAS Sbjct: 361 PLYCNPKDNSTIRALFPSLGTYDLEKAILNISKAMEQEFSATKQTLEAHQSKVSSLASAS 420 Query: 421 RKDHVLDIPTTQRQTACGTVGKQCCLYINYSEEIKSNIQRLHEASENLKNVPLLDWQGIF 480 RKDHVLDIPTTQRQTACGTVGKQCCLYINYSEEIKSNIQRLHEASENLKNVPLLDWQGIF Sbjct: 421 RKDHVLDIPTTQRQTACGTVGKQCCLYINYSEEIKSNIQRLHEASENLKNVPLLDWQGIF 480 Query: 481 AKVGDWFRSWGYVLLIVLFCLFIFVLIYVRVFRKSRRSLNSQPLNLALSPQQSAQLLVSE 540 AKVGDWFRSWGYVLLIVLFCLFIFVLIYVRVFRKSRRSLNSQPLNLALSPQQSAQLLVSE Sbjct: 481 AKVGDWFRSWGYVLLIVLFCLFIFVLIYVRVFRKSRRSLNSQPLNLALSPQQSAQLLVSE 540 Query: 541 TSCQVSNRAMKGLTTHQYDTSLL 563 TSCQVSNRAMKGLTTHQYDTSLL Sbjct: 541 TSCQVSNRAMKGLTTHQYDTSLL 563 >gi|239742330 PREDICTED: hypothetical protein XP_002342492 [Homo sapiens] Length = 563 Score = 1179 bits (3050), Expect = 0.0 Identities = 563/563 (100%), Positives = 563/563 (100%) Query: 1 MGSLSNYALLQLTLTAFLTILVQPQHLLAPVFRTLSILTNQSNCWLCEHLDNAEQPELVF 60 MGSLSNYALLQLTLTAFLTILVQPQHLLAPVFRTLSILTNQSNCWLCEHLDNAEQPELVF Sbjct: 1 MGSLSNYALLQLTLTAFLTILVQPQHLLAPVFRTLSILTNQSNCWLCEHLDNAEQPELVF 60 Query: 61 VPASASTWWTYSGQWMYERVWYPQAEVQNHSTSSYRKVTWHWEASMEAQGLSFAQVRLLE 120 VPASASTWWTYSGQWMYERVWYPQAEVQNHSTSSYRKVTWHWEASMEAQGLSFAQVRLLE Sbjct: 61 VPASASTWWTYSGQWMYERVWYPQAEVQNHSTSSYRKVTWHWEASMEAQGLSFAQVRLLE 120 Query: 121 GNFSLCVENKNGSGPFLGNIPKQYCNQILWFDSTDGTFMPSIDVTNESRNDDDDTSVCLG 180 GNFSLCVENKNGSGPFLGNIPKQYCNQILWFDSTDGTFMPSIDVTNESRNDDDDTSVCLG Sbjct: 121 GNFSLCVENKNGSGPFLGNIPKQYCNQILWFDSTDGTFMPSIDVTNESRNDDDDTSVCLG 180 Query: 181 TRQCSWFAGCTNRTWNSSAVPLIGLPNTQDYKWVDRNSGLTWSGNDTCLYSCQNQTKGLL 240 TRQCSWFAGCTNRTWNSSAVPLIGLPNTQDYKWVDRNSGLTWSGNDTCLYSCQNQTKGLL Sbjct: 181 TRQCSWFAGCTNRTWNSSAVPLIGLPNTQDYKWVDRNSGLTWSGNDTCLYSCQNQTKGLL 240 Query: 241 YQLFRNLFCSYGLTEAHGKWRCADASITNDKGHDGHRTPTWWLTGSNLTLSVNNSGLFFL 300 YQLFRNLFCSYGLTEAHGKWRCADASITNDKGHDGHRTPTWWLTGSNLTLSVNNSGLFFL Sbjct: 241 YQLFRNLFCSYGLTEAHGKWRCADASITNDKGHDGHRTPTWWLTGSNLTLSVNNSGLFFL 300 Query: 301 CGNGVYKGFPPKWSGRCGLGYLVPSLTRYLTLNASQITNLRSFIHKVTPHRCTQGDTDNP 360 CGNGVYKGFPPKWSGRCGLGYLVPSLTRYLTLNASQITNLRSFIHKVTPHRCTQGDTDNP Sbjct: 301 CGNGVYKGFPPKWSGRCGLGYLVPSLTRYLTLNASQITNLRSFIHKVTPHRCTQGDTDNP 360 Query: 361 PLYCNPKDNSTIRALFPSLGTYDLEKAILNISKAMEQEFSATKQTLEAHQSKVSSLASAS 420 PLYCNPKDNSTIRALFPSLGTYDLEKAILNISKAMEQEFSATKQTLEAHQSKVSSLASAS Sbjct: 361 PLYCNPKDNSTIRALFPSLGTYDLEKAILNISKAMEQEFSATKQTLEAHQSKVSSLASAS 420 Query: 421 RKDHVLDIPTTQRQTACGTVGKQCCLYINYSEEIKSNIQRLHEASENLKNVPLLDWQGIF 480 RKDHVLDIPTTQRQTACGTVGKQCCLYINYSEEIKSNIQRLHEASENLKNVPLLDWQGIF Sbjct: 421 RKDHVLDIPTTQRQTACGTVGKQCCLYINYSEEIKSNIQRLHEASENLKNVPLLDWQGIF 480 Query: 481 AKVGDWFRSWGYVLLIVLFCLFIFVLIYVRVFRKSRRSLNSQPLNLALSPQQSAQLLVSE 540 AKVGDWFRSWGYVLLIVLFCLFIFVLIYVRVFRKSRRSLNSQPLNLALSPQQSAQLLVSE Sbjct: 481 AKVGDWFRSWGYVLLIVLFCLFIFVLIYVRVFRKSRRSLNSQPLNLALSPQQSAQLLVSE 540 Query: 541 TSCQVSNRAMKGLTTHQYDTSLL 563 TSCQVSNRAMKGLTTHQYDTSLL Sbjct: 541 TSCQVSNRAMKGLTTHQYDTSLL 563 >gi|46485773 syncytin 2 [Homo sapiens] Length = 538 Score = 72.8 bits (177), Expect = 8e-13 Identities = 128/588 (21%), Positives = 215/588 (36%), Gaps = 121/588 (20%) Query: 9 LLQLTLTAFLTILVQPQHLLAPVFRTLSILTNQ---SNCWLCEHLDNAEQPELVFVPASA 65 LL L LT L P L + L T +NCWLC + E P + PAS Sbjct: 5 LLVLILTPSLAAYRHPDFPLLEKAQQLLQSTGSPYSTNCWLCTS-SSTETPGTAY-PASP 62 Query: 66 STWWTYSGQWMYERVWYPQAE----VQNHSTSSYRKVTWHWEASMEAQGLSFAQVRLLEG 121 W + + W P + N S+ ++ G F + L+ G Sbjct: 63 REWTSIEAELHISYRWDPNLKGLMRPANSLLSTVKQDFPDIRQKPPIFGPIFTNINLM-G 121 Query: 122 NFSLCVENKNGSGPFLGNIPKQYCNQILWFDSTDGTFMPSIDVTNESRND---------- 171 +CV K +G +G +P CN DS T+ N+ R+ Sbjct: 122 IAPICVMAKRKNGTNVGTLPSTVCNVTFTVDSNQQTYQTYTH--NQFRHQPRFPKPPNIT 179 Query: 172 -------DDDTSVCLGT-RQCS----WFAGCTNRTWNSSAVPLIGLPNTQDYKWVDRN-S 218 D + C G CS WF + + + L +T ++ +D+ + Sbjct: 180 FPQGTLLDKSSRFCQGRPSSCSTRNFWFRPADY----NQCLQISNLSSTAEWVLLDQTRN 235 Query: 219 GLTWSGNDTCLYSCQNQTKGLLYQLFRNLFCSYGLTEAHGKWRCADASITNDKGHDGHRT 278 L W +N+TKG + G+T A + S + T Sbjct: 236 SLFW----------ENKTKGANQSQTPCVQVLAGMTIATSYLGISAVS-------EFFGT 278 Query: 279 PTWWLTGSNLTLSVNNSGLFFLCGNGVYKGFPPKWSGRCGLGYLVPSLTRYLTLNASQIT 338 L +++ + G F++CG +++ P W+G C +GY+ P + Sbjct: 279 SLTPLFHFHISTCLKTQGAFYICGQSIHQCLPSNWTGTCTIGYVTPDI------------ 326 Query: 339 NLRSFIHKVTPHRCTQGDTDNP-PLYCNPKDNSTIRAL--FPSL-----------GTYDL 384 FI G+ P P+Y N RA+ P L G + Sbjct: 327 ----FI--------APGNLSLPIPIYGNSPLPRVRRAIHFIPLLAGLGILAGTGTGIAGI 374 Query: 385 EKAILN---ISKAMEQEFSATKQTLEAHQSKVSSLASASRKDHV-LDIPTTQRQTACGTV 440 KA L +SK + + L Q ++ SLA+ ++ LD+ T + C + Sbjct: 375 TKASLTYSQLSKEIANNIDTMAKALTTMQEQIDSLAAVVLQNRRGLDMLTAAQGGICLAL 434 Query: 441 GKQCCLYINYSEEIKSNIQRLHEASENLKNVPL---LDWQGIFAKVGDWFRSWGY----- 492 ++CC ++N S +++ NI++L + +L+ L+W+G + WF SW Sbjct: 435 DEKCCFWVNQSGKVQDNIRQLLNQASSLRERATQGWLNWEGTW----KWF-SWVLPLTGP 489 Query: 493 ---VLLIVLF--CLFIFVLIYV-----RVFRKSRRSLNSQPLNLALSP 530 +LL++LF CL + +V + ++ S P N+ SP Sbjct: 490 LVSLLLLLLFGPCLLNLITQFVSSRLQAIKLQTNLSAGRHPRNIQESP 537 >gi|195963433 syncytin precursor [Homo sapiens] Length = 538 Score = 56.2 bits (134), Expect = 8e-08 Identities = 52/227 (22%), Positives = 99/227 (43%), Gaps = 28/227 (12%) Query: 295 SGLFFLCGNGVYKGFPPKWSGRCGLGYLVPSLTRYLTLNASQITNLRSFIHKVTPHRCTQ 354 SG+FF+CG Y+ C L +LVP +T Y +L S++ ++ Sbjct: 266 SGIFFVCGTSAYRCLNGSSESMCFLSFLVPPMTIYTE------QDLYSYV-------ISK 312 Query: 355 GDTDNPPLYCNPKDNSTIRALFPSLGTYDLEKAIL-NISKAMEQEFSATKQTLEAHQSKV 413 P+ + AL +G +S+ + + +L Q ++ Sbjct: 313 PRNKRVPILPFVIGAGVLGALGTGIGGITTSTQFYYKLSQELNGDMERVADSLVTLQDQL 372 Query: 414 SSLASASRKDH-VLDIPTTQRQTACGTVGKQCCLYINYS----EEIKSNIQRLHEASENL 468 +SLA+ ++ LD+ T +R C +G++CC Y+N S E++K R+ +E L Sbjct: 373 NSLAAVVLQNRRALDLLTAERGGTCLFLGEECCYYVNQSGIVTEKVKEIRDRIQRRAEEL 432 Query: 469 KNVPLLDWQGIFAKVGDWFRSW----GYVLLIVLF--CLFIFVLIYV 509 +N W G+ ++ W + ++L++LF C+F ++ +V Sbjct: 433 RNTG--PW-GLLSQWMPWILPFLGPLAAIILLLLFGPCIFNLLVNFV 476 >gi|48949851 syncytin precursor [Homo sapiens] Length = 538 Score = 56.2 bits (134), Expect = 8e-08 Identities = 52/227 (22%), Positives = 99/227 (43%), Gaps = 28/227 (12%) Query: 295 SGLFFLCGNGVYKGFPPKWSGRCGLGYLVPSLTRYLTLNASQITNLRSFIHKVTPHRCTQ 354 SG+FF+CG Y+ C L +LVP +T Y +L S++ ++ Sbjct: 266 SGIFFVCGTSAYRCLNGSSESMCFLSFLVPPMTIYTE------QDLYSYV-------ISK 312 Query: 355 GDTDNPPLYCNPKDNSTIRALFPSLGTYDLEKAIL-NISKAMEQEFSATKQTLEAHQSKV 413 P+ + AL +G +S+ + + +L Q ++ Sbjct: 313 PRNKRVPILPFVIGAGVLGALGTGIGGITTSTQFYYKLSQELNGDMERVADSLVTLQDQL 372 Query: 414 SSLASASRKDH-VLDIPTTQRQTACGTVGKQCCLYINYS----EEIKSNIQRLHEASENL 468 +SLA+ ++ LD+ T +R C +G++CC Y+N S E++K R+ +E L Sbjct: 373 NSLAAVVLQNRRALDLLTAERGGTCLFLGEECCYYVNQSGIVTEKVKEIRDRIQRRAEEL 432 Query: 469 KNVPLLDWQGIFAKVGDWFRSW----GYVLLIVLF--CLFIFVLIYV 509 +N W G+ ++ W + ++L++LF C+F ++ +V Sbjct: 433 RNTG--PW-GLLSQWMPWILPFLGPLAAIILLLLFGPCIFNLLVNFV 476 >gi|145651814 endogenous retroviral sequence 3 [Homo sapiens] Length = 604 Score = 45.4 bits (106), Expect = 1e-04 Identities = 45/197 (22%), Positives = 81/197 (41%), Gaps = 20/197 (10%) Query: 295 SGLFFLCGNGVYKGFPPKWSGRCGLGYLVPSLTRYLTLNASQITNLRSFIHKVTPHRCTQ 354 SGL+++CG Y+ P KWSG C LG + PS + + Q L I+ T + + Sbjct: 415 SGLYWICGPQAYRQLPAKWSGACVLGTIRPS---FFLMPLKQGEALGYPIYDETKRKSKR 471 Query: 355 G-------DTDNPP----LYCNPKDNSTIRALFPSLGTYDLEKAILNISKAMEQEFSATK 403 G D + PP Y P + Y L + I+ + +E + T Sbjct: 472 GITIGDWKDNEWPPERIIQYYGPATWAEDGMWGYRTPVYMLNR-IIRLQAVLEIITNETA 530 Query: 404 QTLEAHQSKVSSLASASRKDHV-LDIPTTQRQTACGTVG-KQCCLYINYSEEIKSNIQRL 461 L + + + + ++ + LD Q + CG CCL ++ ++ I+ + Sbjct: 531 GALNLLAQQATKMRNVIYQNRLALDYLLAQEEGVCGKFNLTNCCLELDDEGKV---IKEI 587 Query: 462 HEASENLKNVPLLDWQG 478 + L ++P+ W+G Sbjct: 588 TAKIQKLAHIPVQTWKG 604 >gi|157057547 Fc receptor-like 6 [Homo sapiens] Length = 434 Score = 32.7 bits (73), Expect = 0.91 Identities = 22/67 (32%), Positives = 35/67 (52%), Gaps = 3/67 (4%) Query: 449 NYSEEIKSNIQRLHEASENLKNVPLLDWQGIFAKVGDWFRSWGYVLLIVLFCLFIFVLIY 508 NYS E ++++ R E SE K + L Q +F +W W L+ L + +L+Y Sbjct: 273 NYSCEAENSVSR--ERSEP-KKLSLKGSQVLFTPASNWLVPWLPASLLGLMVIAAALLVY 329 Query: 509 VRVFRKS 515 VR +RK+ Sbjct: 330 VRSWRKA 336 >gi|109659839 solute carrier family 5 (sodium/glucose cotransporter), member 10 isoform 1 [Homo sapiens] Length = 612 Score = 32.3 bits (72), Expect = 1.2 Identities = 22/60 (36%), Positives = 27/60 (45%), Gaps = 2/60 (3%) Query: 251 YGLTEAHGKWRCADASITNDKGHD-GHRTPTWWLTGSNLTLSVNNSGLFF-LCGNGVYKG 308 + L A G W AS G+ R TWW G++L S SGLF L G+G G Sbjct: 28 FALNVAVGIWSSCRASRNTVNGYFLAGRDMTWWPIGASLFASSEGSGLFIGLAGSGAAGG 87 >gi|109659836 solute carrier family 5 (sodium/glucose cotransporter), member 10 isoform 2 [Homo sapiens] Length = 596 Score = 32.3 bits (72), Expect = 1.2 Identities = 22/60 (36%), Positives = 27/60 (45%), Gaps = 2/60 (3%) Query: 251 YGLTEAHGKWRCADASITNDKGHD-GHRTPTWWLTGSNLTLSVNNSGLFF-LCGNGVYKG 308 + L A G W AS G+ R TWW G++L S SGLF L G+G G Sbjct: 28 FALNVAVGIWSSCRASRNTVNGYFLAGRDMTWWPIGASLFASSEGSGLFIGLAGSGAAGG 87 >gi|226443002 jumonji, AT rich interactive domain 1D isoform 3 [Homo sapiens] Length = 1482 Score = 32.0 bits (71), Expect = 1.6 Identities = 29/104 (27%), Positives = 44/104 (42%), Gaps = 10/104 (9%) Query: 327 TRYLTLNASQITNLRSFIHKVTPHRCTQGDTDNPPLYCNP-KDNSTIRALFPSL-----G 380 T L N S + S+I +V C++GD D+ L+C+ DN I L P L G Sbjct: 242 TMQLRKNHSSAQFIDSYICQV----CSRGDEDDKLLFCDGCDDNYHIFCLLPPLPEIPRG 297 Query: 381 TYDLEKAILNISKAMEQEFSATKQTLEAHQSKVSSLASASRKDH 424 + K IL K + F + T E +A + + D+ Sbjct: 298 IWRCPKCILAECKQPPEAFGFEQATQEYSLQSFGEMADSFKSDY 341 >gi|33356560 jumonji, AT rich interactive domain 1D isoform 2 [Homo sapiens] Length = 1539 Score = 32.0 bits (71), Expect = 1.6 Identities = 29/104 (27%), Positives = 44/104 (42%), Gaps = 10/104 (9%) Query: 327 TRYLTLNASQITNLRSFIHKVTPHRCTQGDTDNPPLYCNP-KDNSTIRALFPSL-----G 380 T L N S + S+I +V C++GD D+ L+C+ DN I L P L G Sbjct: 299 TMQLRKNHSSAQFIDSYICQV----CSRGDEDDKLLFCDGCDDNYHIFCLLPPLPEIPRG 354 Query: 381 TYDLEKAILNISKAMEQEFSATKQTLEAHQSKVSSLASASRKDH 424 + K IL K + F + T E +A + + D+ Sbjct: 355 IWRCPKCILAECKQPPEAFGFEQATQEYSLQSFGEMADSFKSDY 398 >gi|226442991 jumonji, AT rich interactive domain 1D isoform 1 [Homo sapiens] Length = 1570 Score = 32.0 bits (71), Expect = 1.6 Identities = 29/104 (27%), Positives = 44/104 (42%), Gaps = 10/104 (9%) Query: 327 TRYLTLNASQITNLRSFIHKVTPHRCTQGDTDNPPLYCNP-KDNSTIRALFPSL-----G 380 T L N S + S+I +V C++GD D+ L+C+ DN I L P L G Sbjct: 299 TMQLRKNHSSAQFIDSYICQV----CSRGDEDDKLLFCDGCDDNYHIFCLLPPLPEIPRG 354 Query: 381 TYDLEKAILNISKAMEQEFSATKQTLEAHQSKVSSLASASRKDH 424 + K IL K + F + T E +A + + D+ Sbjct: 355 IWRCPKCILAECKQPPEAFGFEQATQEYSLQSFGEMADSFKSDY 398 >gi|31542280 hypothetical protein LOC221481 [Homo sapiens] Length = 367 Score = 32.0 bits (71), Expect = 1.6 Identities = 25/120 (20%), Positives = 50/120 (41%), Gaps = 13/120 (10%) Query: 8 ALLQLTLTAFLTILVQPQHLLAPVFRTLSILTNQSNCWLCEHLDNAEQPELVFVPASAST 67 AL+++ + ++ VQ LL+ + + +L + NC + + N QP Sbjct: 220 ALMEILQSDYILAQVQAVRLLSYLAQKNDLLYDILNCQVHSNFLNLFQP----------- 268 Query: 68 WWTYSGQWMYERVWYPQAEVQNHSTSSYRKVTWHWEASMEAQGLSFAQVRLLEGNFSLCV 127 T SG +YE + + + + + Y V WH+ + L + RL + +L + Sbjct: 269 --TQSGSLLYEVLVFAERLSEGRNAPHYHVVKWHYNEQSLHESLFGEESRLADRLLALVI 326 >gi|154350244 hypothetical protein LOC79632 isoform 2 [Homo sapiens] Length = 971 Score = 31.2 bits (69), Expect = 2.6 Identities = 23/96 (23%), Positives = 45/96 (46%), Gaps = 5/96 (5%) Query: 383 DLEKAILNISKAMEQEFSATKQTLEAHQSKVSSLASASRKDHVLDIPTTQR-QTACGTVG 441 + + A+LN+ +EQE ++T+ A K + H L+I T+ + C + Sbjct: 476 ETKDALLNVEGELEQERQQHEETIAA--MKEEEKLKVDKMAHDLEIKWTENLRQECSKLR 533 Query: 442 KQCCLYINYSEEIKSNIQRLHEASENLKNVPLLDWQ 477 ++ L + + E+ KS + +L + + KN WQ Sbjct: 534 EE--LRLQHEEDKKSAMSQLLQLKDREKNAARDSWQ 567 >gi|154350226 hypothetical protein LOC79632 isoform 1 [Homo sapiens] Length = 1140 Score = 31.2 bits (69), Expect = 2.6 Identities = 23/96 (23%), Positives = 45/96 (46%), Gaps = 5/96 (5%) Query: 383 DLEKAILNISKAMEQEFSATKQTLEAHQSKVSSLASASRKDHVLDIPTTQR-QTACGTVG 441 + + A+LN+ +EQE ++T+ A K + H L+I T+ + C + Sbjct: 596 ETKDALLNVEGELEQERQQHEETIAA--MKEEEKLKVDKMAHDLEIKWTENLRQECSKLR 653 Query: 442 KQCCLYINYSEEIKSNIQRLHEASENLKNVPLLDWQ 477 ++ L + + E+ KS + +L + + KN WQ Sbjct: 654 EE--LRLQHEEDKKSAMSQLLQLKDREKNAARDSWQ 687 >gi|165932370 FAT tumor suppressor homolog 4 [Homo sapiens] Length = 4981 Score = 30.4 bits (67), Expect = 4.5 Identities = 38/119 (31%), Positives = 55/119 (46%), Gaps = 16/119 (13%) Query: 137 LGNIPKQYCNQILWFDSTDGTFMPSIDVTNESRNDDDDTSVCLGTRQCSWFAGCTNRTWN 196 L +IP C+ STDGTF D+T S ND ++V R +FAG +N T + Sbjct: 3658 LFSIPGGTCDLNSQPRSTDGTF----DLTVLS-NDGVHSTVTSNIRV--FFAGFSNATVD 3710 Query: 197 SSAVPLIGLPNTQDYKWVD-------RNSGLTWSGNDTCLYSC--QNQTKGLLYQLFRN 246 +S + +G+P +D+ +S LT G LYS +N LL + RN Sbjct: 3711 NSILLRLGVPTVKDFLTNHYLHFLRIASSQLTGLGTAVQLYSAYEENNRTFLLAAVKRN 3769 >gi|50659091 scavenger receptor cysteine-rich type 1 precursor [Homo sapiens] Length = 1453 Score = 30.4 bits (67), Expect = 4.5 Identities = 36/133 (27%), Positives = 58/133 (43%), Gaps = 31/133 (23%) Query: 175 TSVCLGTRQCS----WFAGCTNRTWNSSAVPLI-------------GLPNTQ---DYKWV 214 T+ C+G + W C ++ WN++A ++ GLP+ Q D W+ Sbjct: 268 TNRCMGRVELKIQGRWGTVCHHK-WNNAAADVVCKQLGCGTALHFAGLPHLQSGSDVVWL 326 Query: 215 DRNSGLTWSGNDTCLYSCQNQ---TKGLLYQLFRNLFCSYGLTEAHGKWRCADASITNDK 271 D G++ SGN++ L+ C++ L+Q ++ CS G A + R AD S N Sbjct: 327 D---GVSCSGNESFLWDCRHSGTVNFDCLHQNDVSVICSDG---ADLELRLADGS-NNCS 379 Query: 272 GHDGHRTPTWWLT 284 G R W T Sbjct: 380 GRVEVRIHEQWWT 392 >gi|223633941 hypothetical protein LOC389730 [Homo sapiens] Length = 1343 Score = 29.6 bits (65), Expect = 7.7 Identities = 16/53 (30%), Positives = 27/53 (50%) Query: 74 QWMYERVWYPQAEVQNHSTSSYRKVTWHWEASMEAQGLSFAQVRLLEGNFSLC 126 QW++ + A V S + + + + +S EAQGL A ++L+ SLC Sbjct: 1168 QWIFSKKKSKPAPVTAESQKTVKNRSCVYSSSAEAQGLMTAVGQMLDKKMSLC 1220 >gi|91206406 hypothetical protein LOC642265 [Homo sapiens] Length = 1347 Score = 29.6 bits (65), Expect = 7.7 Identities = 16/53 (30%), Positives = 27/53 (50%) Query: 74 QWMYERVWYPQAEVQNHSTSSYRKVTWHWEASMEAQGLSFAQVRLLEGNFSLC 126 QW++ + A V S + + + + +S EAQGL A ++L+ SLC Sbjct: 1172 QWIFSKKKSKPAPVTAESQKTVKNRSCVYSSSAEAQGLMTAVGQMLDEKMSLC 1224 >gi|51243032 oxysterol-binding protein-like protein 8 isoform b [Homo sapiens] Length = 847 Score = 29.6 bits (65), Expect = 7.7 Identities = 24/113 (21%), Positives = 46/113 (40%), Gaps = 3/113 (2%) Query: 381 TYDLEKAILNISKAMEQEFSATKQTLEAHQSKVSSLASASRKDHVLDIPTTQRQTACGTV 440 T DL + L+ + Q F K+ + ++ + S S S+ + L + + + + Sbjct: 14 TKDLHQPSLSPASPHSQGFERGKEDISQNKDESSLSMSKSKSESKLYNGSEKDSSTSSKL 73 Query: 441 GKQCCLYI---NYSEEIKSNIQRLHEASENLKNVPLLDWQGIFAKVGDWFRSW 490 K+ L + NY EE K + L + + + DW I + W + W Sbjct: 74 TKKESLKVQKKNYREEKKRATKELLSTITDPSVIVMADWLKIRGTLKSWTKLW 126 >gi|18079218 oxysterol-binding protein-like protein 8 isoform a [Homo sapiens] Length = 889 Score = 29.6 bits (65), Expect = 7.7 Identities = 24/113 (21%), Positives = 46/113 (40%), Gaps = 3/113 (2%) Query: 381 TYDLEKAILNISKAMEQEFSATKQTLEAHQSKVSSLASASRKDHVLDIPTTQRQTACGTV 440 T DL + L+ + Q F K+ + ++ + S S S+ + L + + + + Sbjct: 56 TKDLHQPSLSPASPHSQGFERGKEDISQNKDESSLSMSKSKSESKLYNGSEKDSSTSSKL 115 Query: 441 GKQCCLYI---NYSEEIKSNIQRLHEASENLKNVPLLDWQGIFAKVGDWFRSW 490 K+ L + NY EE K + L + + + DW I + W + W Sbjct: 116 TKKESLKVQKKNYREEKKRATKELLSTITDPSVIVMADWLKIRGTLKSWTKLW 168 >gi|133892686 hypothetical protein LOC727830 [Homo sapiens] Length = 1347 Score = 29.6 bits (65), Expect = 7.7 Identities = 16/53 (30%), Positives = 27/53 (50%) Query: 74 QWMYERVWYPQAEVQNHSTSSYRKVTWHWEASMEAQGLSFAQVRLLEGNFSLC 126 QW++ + A V S + + + + +S EAQGL A ++L+ SLC Sbjct: 1172 QWIFSKKKSKPAPVTAESQKTVKNRSCVYSSSAEAQGLMTAVGQMLDEKMSLC 1224 >gi|146231958 hypothetical protein LOC647060 [Homo sapiens] Length = 1347 Score = 29.6 bits (65), Expect = 7.7 Identities = 16/53 (30%), Positives = 27/53 (50%) Query: 74 QWMYERVWYPQAEVQNHSTSSYRKVTWHWEASMEAQGLSFAQVRLLEGNFSLC 126 QW++ + A V S + + + + +S EAQGL A ++L+ SLC Sbjct: 1172 QWIFSKKKSKPAPVTAESQKTVKNRSCVYSSSAEAQGLMTAVGQMLDEKMSLC 1224 Database: hs.faa Posted date: Aug 4, 2009 4:42 PM Number of letters in database: 18,247,518 Number of sequences in database: 37,866 Lambda K H 0.320 0.133 0.428 Gapped Lambda K H 0.267 0.0410 0.140 Matrix: BLOSUM62 Gap Penalties: Existence: 11, Extension: 1 Number of Hits to DB: 21,820,533 Number of Sequences: 37866 Number of extensions: 971552 Number of successful extensions: 2291 Number of sequences better than 10.0: 24 Number of HSP's better than 10.0 without gapping: 11 Number of HSP's successfully gapped in prelim test: 13 Number of HSP's that attempted gapping in prelim test: 2268 Number of HSP's gapped (non-prelim): 35 length of query: 563 length of database: 18,247,518 effective HSP length: 107 effective length of query: 456 effective length of database: 14,195,856 effective search space: 6473310336 effective search space used: 6473310336 T: 11 A: 40 X1: 16 ( 7.4 bits) X2: 38 (14.6 bits) X3: 64 (24.7 bits) S1: 41 (21.8 bits) S2: 65 (29.6 bits)
Search results were obtained with NCBI BLAST and RefSeq entries.
Guide to the Human Genome
Copyright © 2010 by Stewart Scherer. All rights reserved.