LOC100288802 19555

Name: LOC100288802	Sequence: fasta or formatted (133aa)		NCBI GI: 239748324
Description: PREDICTED: similar to hCG1776279		Referenced in: Ribosomes
Other entries for this name: alt mRNA [133aa] PREDICTED: hypothetical protein XP_002342458
Composition: Amino acid Percentage Count Longest homopolymer A alanine 13.5 18 2 C cysteine 1.5 2 1 D aspartate 3.8 5 2 E glutamate 6.0 8 3 F phenylalanine 1.5 2 1 G glycine 5.3 7 1 H histidine 6.0 8 2 I isoleucine 6.0 8 2 K lysine 12.8 17 2 L leucine 6.0 8 1 M methionine 3.8 5 1 N asparagine 3.0 4 1 P proline 8.3 11 2 Q glutamine 3.0 4 1 R arginine 3.8 5 1 S serine 0.8 1 1 T threonine 6.0 8 1 V valine 7.5 10 1 W tryptophan 1.5 2 2 Y tyrosine 0.0 0 0			Comparative genomics: Search single species RefSeq proteins at NCBI H. sapiens M. musculus D. rerio C. intestinalis S. purpuratus D. melanogaster C. elegans A. thaliana S. cerevisiae E. coli W3110 A. pernix K1 Search summary Figure data Additional searches of RefSeq proteins at NCBI All Eukaryotes Bacteria Archaea Viruses Primates Mammals Vertebrates
Related human proteins: Protein Relative score Description Self-match 1.000 PREDICTED: similar to hCG1776279 LOC100293728 1.000 PREDICTED: similar to hCG1776279 LOC100288802 1.000 PREDICTED: hypothetical protein XP_002342458 RPL23A 0.372 ribosomal protein L23a LOC731985 0.172 PREDICTED: similar to ribosomal protein L23a LOC100290257 0.092 PREDICTED: hypothetical protein XP_002346971 LOC100287434 0.092 PREDICTED: hypothetical protein XP_002342821 WRN 0.024 Werner syndrome protein LOC652522 0.024 PREDICTED: similar to Werner syndrome ATP-dependent... LOC100293892 0.020 PREDICTED: hypothetical protein LOC100289756 0.020 PREDICTED: hypothetical protein XP_002348004 LOC100286981 0.020 PREDICTED: hypothetical protein XP_002343724 MYBPC2 0.020 myosin binding protein C, fast type ZFPM1 0.020 zinc finger protein, multitype 1 SAMD5 0.020 sterile alpha motif domain containing 5 PHC3 0.016 polyhomeotic like 3 ASB2 0.016 ankyrin repeat and SOCS box-containing protein 2 [Ho... PDIA2 0.012 protein disulfide isomerase A2 CBFA2T3 0.012 myeloid translocation gene on chromosome 16 isoform ... PKHD1L1 0.012 fibrocystin L BOD1L 0.012 biorientation of chromosomes in cell division 1-like... NEFH 0.012 neurofilament, heavy polypeptide 200kDa HIST1H1B 0.012 histone cluster 1, H1b BDP1 0.012 transcription factor-like nuclear regulator RIMBP3B 0.008 RIMS binding protein 3B RIMBP3C 0.008 RIMS binding protein 3C EHBP1 0.008 EH domain binding protein 1 isoform 3 EHBP1 0.008 EH domain binding protein 1 isoform 3 EHBP1 0.008 EH domain binding protein 1 isoform 2 EHBP1 0.008 EH domain binding protein 1 isoform 1 Human BLASTP results (used to prepare the table)

Gene descriptions are from NCBI RefSeq. Search results were obtained with NCBI BLAST and RefSeq entries. When identical proteins are present, the self-match may not be listed first in BLASTP output. In such cases, the table above has been reordered to place it first.

See About the Figures for the scoring system used in the figure above right. The same scoring system was used in the table of BLASTP results.