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Search of human proteins with 239747808
BLASTP 2.2.11 [Jun-05-2005]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= gi|239747808 PREDICTED: hypothetical protein XP_002348319 [Homo
sapiens]
(108 letters)
Database: hs.faa
37,866 sequences; 18,247,518 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
gi|239753235 PREDICTED: similar to hCG36857 [Homo sapiens] 221 7e-59
gi|239747808 PREDICTED: hypothetical protein XP_002348319 [Homo ... 221 7e-59
gi|169218204 PREDICTED: similar to pre-B lymphocyte gene 1 [Homo... 167 1e-42
gi|169167318 PREDICTED: similar to hCG2042707 [Homo sapiens] 166 3e-42
gi|239741653 PREDICTED: hypothetical protein XP_002342271 [Homo ... 162 5e-41
gi|239755286 PREDICTED: similar to hCG1742442 [Homo sapiens] 162 7e-41
gi|169194776 PREDICTED: similar to hCG1742442 [Homo sapiens] 162 7e-41
gi|169190399 PREDICTED: similar to hCG1742442 [Homo sapiens] 162 7e-41
gi|169163724 PREDICTED: similar to hCG26659 [Homo sapiens] 161 1e-40
gi|239747852 PREDICTED: hypothetical protein XP_002346449 [Homo ... 161 1e-40
gi|169163023 PREDICTED: similar to hCG26659 [Homo sapiens] 161 1e-40
gi|169163335 PREDICTED: similar to hCG1742442 [Homo sapiens] 155 5e-39
gi|169217390 PREDICTED: similar to hCG1742442 [Homo sapiens] 154 1e-38
gi|169217347 PREDICTED: similar to hCG1742442 [Homo sapiens] 154 1e-38
gi|239743839 PREDICTED: hypothetical protein XP_002342967 [Homo ... 149 4e-37
gi|169174843 PREDICTED: similar to hCG1742442 [Homo sapiens] 148 1e-36
gi|239747814 PREDICTED: hypothetical protein XP_002348323 [Homo ... 139 6e-34
gi|169163270 PREDICTED: similar to hCG2043206 [Homo sapiens] 134 2e-32
gi|239753212 PREDICTED: similar to hCG1686089 [Homo sapiens] 127 3e-30
gi|239749464 PREDICTED: hypothetical protein XP_002347049 [Homo ... 127 3e-30
gi|239753214 PREDICTED: similar to hCG2043206 [Homo sapiens] 125 1e-29
gi|169215700 PREDICTED: hypothetical protein [Homo sapiens] 103 3e-23
gi|169216113 PREDICTED: hypothetical protein [Homo sapiens] 103 3e-23
gi|169215489 PREDICTED: hypothetical protein [Homo sapiens] 103 3e-23
gi|239757668 PREDICTED: similar to Ig lambda chain [Homo sapiens] 80 5e-16
gi|239752152 PREDICTED: hypothetical protein XP_002348153 [Homo ... 78 2e-15
gi|239757664 PREDICTED: similar to hCG2040019 [Homo sapiens] 76 5e-15
gi|239757666 PREDICTED: similar to hCG2040021 [Homo sapiens] 65 9e-12
gi|169217719 PREDICTED: similar to hCG96018 [Homo sapiens] 53 5e-08
gi|89062025 PREDICTED: similar to hCG96018 [Homo sapiens] 53 5e-08
>gi|239753235 PREDICTED: similar to hCG36857 [Homo sapiens]
Length = 108
Score = 221 bits (564), Expect = 7e-59
Identities = 108/108 (100%), Positives = 108/108 (100%)
Query: 1 MNMRIPAQLLAFLLLCLPDARCDIQMTQPPSSLSASVGDRVTVSCQASQSIYNYLNWYQQ 60
MNMRIPAQLLAFLLLCLPDARCDIQMTQPPSSLSASVGDRVTVSCQASQSIYNYLNWYQQ
Sbjct: 1 MNMRIPAQLLAFLLLCLPDARCDIQMTQPPSSLSASVGDRVTVSCQASQSIYNYLNWYQQ 60
Query: 61 KPGKAPKFLTYRASSLQRGMPSQFSGSGYGRDFTLTVSSLQPEDFATY 108
KPGKAPKFLTYRASSLQRGMPSQFSGSGYGRDFTLTVSSLQPEDFATY
Sbjct: 61 KPGKAPKFLTYRASSLQRGMPSQFSGSGYGRDFTLTVSSLQPEDFATY 108
>gi|239747808 PREDICTED: hypothetical protein XP_002348319 [Homo
sapiens]
Length = 108
Score = 221 bits (564), Expect = 7e-59
Identities = 108/108 (100%), Positives = 108/108 (100%)
Query: 1 MNMRIPAQLLAFLLLCLPDARCDIQMTQPPSSLSASVGDRVTVSCQASQSIYNYLNWYQQ 60
MNMRIPAQLLAFLLLCLPDARCDIQMTQPPSSLSASVGDRVTVSCQASQSIYNYLNWYQQ
Sbjct: 1 MNMRIPAQLLAFLLLCLPDARCDIQMTQPPSSLSASVGDRVTVSCQASQSIYNYLNWYQQ 60
Query: 61 KPGKAPKFLTYRASSLQRGMPSQFSGSGYGRDFTLTVSSLQPEDFATY 108
KPGKAPKFLTYRASSLQRGMPSQFSGSGYGRDFTLTVSSLQPEDFATY
Sbjct: 61 KPGKAPKFLTYRASSLQRGMPSQFSGSGYGRDFTLTVSSLQPEDFATY 108
>gi|169218204 PREDICTED: similar to pre-B lymphocyte gene 1 [Homo
sapiens]
Length = 123
Score = 167 bits (424), Expect = 1e-42
Identities = 81/108 (75%), Positives = 93/108 (86%)
Query: 1 MNMRIPAQLLAFLLLCLPDARCDIQMTQPPSSLSASVGDRVTVSCQASQSIYNYLNWYQQ 60
M+MR+PAQLL LLL LP ARCDIQ+TQ PS LSASVGDRVT++C+ASQ I +YL WYQQ
Sbjct: 1 MDMRVPAQLLGLLLLWLPGARCDIQLTQSPSFLSASVGDRVTITCRASQGISSYLAWYQQ 60
Query: 61 KPGKAPKFLTYRASSLQRGMPSQFSGSGYGRDFTLTVSSLQPEDFATY 108
KPGKAPK L Y AS+LQ G+PS+FSGSG G +FTLT+SSLQPEDFATY
Sbjct: 61 KPGKAPKLLIYAASTLQSGVPSRFSGSGSGTEFTLTISSLQPEDFATY 108
>gi|169167318 PREDICTED: similar to hCG2042707 [Homo sapiens]
Length = 142
Score = 166 bits (421), Expect = 3e-42
Identities = 81/108 (75%), Positives = 91/108 (84%)
Query: 1 MNMRIPAQLLAFLLLCLPDARCDIQMTQPPSSLSASVGDRVTVSCQASQSIYNYLNWYQQ 60
M+MR+PAQLL LLL LP RCDIQMTQ PSSLSASVGDRVT++C+ASQ I N L WYQQ
Sbjct: 10 MDMRVPAQLLGLLLLWLPGTRCDIQMTQSPSSLSASVGDRVTITCRASQGISNSLAWYQQ 69
Query: 61 KPGKAPKFLTYRASSLQRGMPSQFSGSGYGRDFTLTVSSLQPEDFATY 108
KPGKAPK L Y AS L+ G+PS+FSGSG G D+TLT+SSLQPEDFATY
Sbjct: 70 KPGKAPKLLLYAASRLESGVPSRFSGSGSGTDYTLTISSLQPEDFATY 117
>gi|239741653 PREDICTED: hypothetical protein XP_002342271 [Homo
sapiens]
Length = 636
Score = 162 bits (410), Expect = 5e-41
Identities = 79/108 (73%), Positives = 89/108 (82%)
Query: 1 MNMRIPAQLLAFLLLCLPDARCDIQMTQPPSSLSASVGDRVTVSCQASQSIYNYLNWYQQ 60
++MR P QLL L+L LP ARCDIQMTQ PSSLSASVGDRVT++C+ASQ I N LNWYQQ
Sbjct: 512 IDMRAPTQLLGLLVLWLPGARCDIQMTQSPSSLSASVGDRVTITCRASQGISNNLNWYQQ 571
Query: 61 KPGKAPKFLTYRASSLQRGMPSQFSGSGYGRDFTLTVSSLQPEDFATY 108
KPGK PK L Y ASSLQ G+PS+FS SG G D+TLT+ SLQPEDFATY
Sbjct: 572 KPGKTPKLLIYAASSLQSGIPSRFSDSGSGADYTLTIRSLQPEDFATY 619
>gi|239755286 PREDICTED: similar to hCG1742442 [Homo sapiens]
Length = 296
Score = 162 bits (409), Expect = 7e-41
Identities = 79/106 (74%), Positives = 88/106 (83%)
Query: 3 MRIPAQLLAFLLLCLPDARCDIQMTQPPSSLSASVGDRVTVSCQASQSIYNYLNWYQQKP 62
+R P QLL L+L LP ARCDIQMTQ PSSLSASVGDRVT++C+ASQ I N LNWYQQKP
Sbjct: 174 VRAPTQLLGLLVLWLPGARCDIQMTQSPSSLSASVGDRVTITCRASQGISNNLNWYQQKP 233
Query: 63 GKAPKFLTYRASSLQRGMPSQFSGSGYGRDFTLTVSSLQPEDFATY 108
GK PK L Y ASSLQ G+PS+FS SG G D+TLT+SSLQPEDFATY
Sbjct: 234 GKTPKLLIYAASSLQSGIPSRFSDSGSGTDYTLTISSLQPEDFATY 279
>gi|169194776 PREDICTED: similar to hCG1742442 [Homo sapiens]
Length = 242
Score = 162 bits (409), Expect = 7e-41
Identities = 79/106 (74%), Positives = 88/106 (83%)
Query: 3 MRIPAQLLAFLLLCLPDARCDIQMTQPPSSLSASVGDRVTVSCQASQSIYNYLNWYQQKP 62
+R P QLL L+L LP ARCDIQMTQ PSSLSASVGDRVT++C+ASQ I N LNWYQQKP
Sbjct: 120 VRAPTQLLGLLVLWLPGARCDIQMTQSPSSLSASVGDRVTITCRASQGISNNLNWYQQKP 179
Query: 63 GKAPKFLTYRASSLQRGMPSQFSGSGYGRDFTLTVSSLQPEDFATY 108
GK PK L Y ASSLQ G+PS+FS SG G D+TLT+SSLQPEDFATY
Sbjct: 180 GKTPKLLIYAASSLQSGIPSRFSDSGSGTDYTLTISSLQPEDFATY 225
>gi|169190399 PREDICTED: similar to hCG1742442 [Homo sapiens]
Length = 242
Score = 162 bits (409), Expect = 7e-41
Identities = 79/106 (74%), Positives = 88/106 (83%)
Query: 3 MRIPAQLLAFLLLCLPDARCDIQMTQPPSSLSASVGDRVTVSCQASQSIYNYLNWYQQKP 62
+R P QLL L+L LP ARCDIQMTQ PSSLSASVGDRVT++C+ASQ I N LNWYQQKP
Sbjct: 120 VRAPTQLLGLLVLWLPGARCDIQMTQSPSSLSASVGDRVTITCRASQGISNNLNWYQQKP 179
Query: 63 GKAPKFLTYRASSLQRGMPSQFSGSGYGRDFTLTVSSLQPEDFATY 108
GK PK L Y ASSLQ G+PS+FS SG G D+TLT+SSLQPEDFATY
Sbjct: 180 GKTPKLLIYAASSLQSGIPSRFSDSGSGTDYTLTISSLQPEDFATY 225
>gi|169163724 PREDICTED: similar to hCG26659 [Homo sapiens]
Length = 191
Score = 161 bits (407), Expect = 1e-40
Identities = 80/108 (74%), Positives = 90/108 (83%)
Query: 1 MNMRIPAQLLAFLLLCLPDARCDIQMTQPPSSLSASVGDRVTVSCQASQSIYNYLNWYQQ 60
M MR+PAQLL LLL L ARCDIQ+TQ PSSLSASVGDRVT++C+ASQ I N L+WYQQ
Sbjct: 1 MEMRVPAQLLGLLLLWLRGARCDIQVTQSPSSLSASVGDRVTITCRASQGISNGLSWYQQ 60
Query: 61 KPGKAPKFLTYRASSLQRGMPSQFSGSGYGRDFTLTVSSLQPEDFATY 108
KPG+AP L Y ASSLQ G+PS+FSGSG G DFTLT+SSLQPED ATY
Sbjct: 61 KPGQAPTLLIYAASSLQSGVPSRFSGSGSGTDFTLTISSLQPEDVATY 108
>gi|239747852 PREDICTED: hypothetical protein XP_002346449 [Homo
sapiens]
Length = 155
Score = 161 bits (407), Expect = 1e-40
Identities = 80/108 (74%), Positives = 90/108 (83%)
Query: 1 MNMRIPAQLLAFLLLCLPDARCDIQMTQPPSSLSASVGDRVTVSCQASQSIYNYLNWYQQ 60
M MR+PAQLL LLL L ARCDIQ+TQ PSSLSASVGDRVT++C+ASQ I N L+WYQQ
Sbjct: 1 MEMRVPAQLLGLLLLWLRGARCDIQVTQSPSSLSASVGDRVTITCRASQGISNGLSWYQQ 60
Query: 61 KPGKAPKFLTYRASSLQRGMPSQFSGSGYGRDFTLTVSSLQPEDFATY 108
KPG+AP L Y ASSLQ G+PS+FSGSG G DFTLT+SSLQPED ATY
Sbjct: 61 KPGQAPTLLIYAASSLQSGVPSRFSGSGSGTDFTLTISSLQPEDVATY 108
>gi|169163023 PREDICTED: similar to hCG26659 [Homo sapiens]
Length = 191
Score = 161 bits (407), Expect = 1e-40
Identities = 80/108 (74%), Positives = 90/108 (83%)
Query: 1 MNMRIPAQLLAFLLLCLPDARCDIQMTQPPSSLSASVGDRVTVSCQASQSIYNYLNWYQQ 60
M MR+PAQLL LLL L ARCDIQ+TQ PSSLSASVGDRVT++C+ASQ I N L+WYQQ
Sbjct: 1 MEMRVPAQLLGLLLLWLRGARCDIQVTQSPSSLSASVGDRVTITCRASQGISNGLSWYQQ 60
Query: 61 KPGKAPKFLTYRASSLQRGMPSQFSGSGYGRDFTLTVSSLQPEDFATY 108
KPG+AP L Y ASSLQ G+PS+FSGSG G DFTLT+SSLQPED ATY
Sbjct: 61 KPGQAPTLLIYAASSLQSGVPSRFSGSGSGTDFTLTISSLQPEDVATY 108
>gi|169163335 PREDICTED: similar to hCG1742442 [Homo sapiens]
Length = 295
Score = 155 bits (393), Expect = 5e-39
Identities = 77/107 (71%), Positives = 86/107 (80%)
Query: 2 NMRIPAQLLAFLLLCLPDARCDIQMTQPPSSLSASVGDRVTVSCQASQSIYNYLNWYQQK 61
++R P QLL L L LP ARCDIQMTQ PSSLSASVG RVT++C+ASQ I N LNWYQQK
Sbjct: 172 DVRAPTQLLGLLGLWLPGARCDIQMTQSPSSLSASVGGRVTITCRASQGISNNLNWYQQK 231
Query: 62 PGKAPKFLTYRASSLQRGMPSQFSGSGYGRDFTLTVSSLQPEDFATY 108
PGK PK L Y ASSLQ G+PS+FS SG G D+TLT+SSLQPEDFA Y
Sbjct: 232 PGKTPKLLIYAASSLQSGIPSRFSDSGSGADYTLTISSLQPEDFAAY 278
>gi|169217390 PREDICTED: similar to hCG1742442 [Homo sapiens]
Length = 205
Score = 154 bits (389), Expect = 1e-38
Identities = 74/107 (69%), Positives = 86/107 (80%)
Query: 2 NMRIPAQLLAFLLLCLPDARCDIQMTQPPSSLSASVGDRVTVSCQASQSIYNYLNWYQQK 61
++R P QLL L+ LP RCDIQMTQ PSSLSASVGDRVT++C+ASQ I N LNWYQ+K
Sbjct: 82 DVRAPTQLLGLLVFWLPGVRCDIQMTQSPSSLSASVGDRVTITCRASQGIINNLNWYQKK 141
Query: 62 PGKAPKFLTYRASSLQRGMPSQFSGSGYGRDFTLTVSSLQPEDFATY 108
PGK PK L Y ASSLQ G+P++FS SG G D+T T+SSLQPEDFATY
Sbjct: 142 PGKTPKLLIYAASSLQSGIPTRFSDSGSGTDYTPTISSLQPEDFATY 188
>gi|169217347 PREDICTED: similar to hCG1742442 [Homo sapiens]
Length = 205
Score = 154 bits (389), Expect = 1e-38
Identities = 74/107 (69%), Positives = 86/107 (80%)
Query: 2 NMRIPAQLLAFLLLCLPDARCDIQMTQPPSSLSASVGDRVTVSCQASQSIYNYLNWYQQK 61
++R P QLL L+ LP RCDIQMTQ PSSLSASVGDRVT++C+ASQ I N LNWYQ+K
Sbjct: 82 DVRAPTQLLGLLVFWLPGVRCDIQMTQSPSSLSASVGDRVTITCRASQGIINNLNWYQKK 141
Query: 62 PGKAPKFLTYRASSLQRGMPSQFSGSGYGRDFTLTVSSLQPEDFATY 108
PGK PK L Y ASSLQ G+P++FS SG G D+T T+SSLQPEDFATY
Sbjct: 142 PGKTPKLLIYAASSLQSGIPTRFSDSGSGTDYTPTISSLQPEDFATY 188
>gi|239743839 PREDICTED: hypothetical protein XP_002342967 [Homo
sapiens]
Length = 761
Score = 149 bits (377), Expect = 4e-37
Identities = 77/110 (70%), Positives = 86/110 (78%), Gaps = 3/110 (2%)
Query: 2 NMRIPAQLLAFLLLC---LPDARCDIQMTQPPSSLSASVGDRVTVSCQASQSIYNYLNWY 58
++R P QLL L L LP ARCDIQMTQ PSSLSASVG RVT++C+ASQ I N LNWY
Sbjct: 635 DVRAPTQLLGLLGLLGLWLPGARCDIQMTQSPSSLSASVGGRVTITCRASQGISNNLNWY 694
Query: 59 QQKPGKAPKFLTYRASSLQRGMPSQFSGSGYGRDFTLTVSSLQPEDFATY 108
QQKP K PK L Y ASSLQ G+PS+FS SG G D+TLT+SSLQPEDFATY
Sbjct: 695 QQKPRKTPKLLIYAASSLQSGIPSRFSDSGSGTDYTLTISSLQPEDFATY 744
>gi|169174843 PREDICTED: similar to hCG1742442 [Homo sapiens]
Length = 276
Score = 148 bits (373), Expect = 1e-36
Identities = 76/110 (69%), Positives = 85/110 (77%), Gaps = 3/110 (2%)
Query: 2 NMRIPAQLLAFLLLC---LPDARCDIQMTQPPSSLSASVGDRVTVSCQASQSIYNYLNWY 58
++R P QLL L L LP RCDIQMTQ PSSLSASVG RVT++C+ASQ I N LNWY
Sbjct: 150 DVRAPTQLLGLLGLLGLWLPGVRCDIQMTQSPSSLSASVGGRVTITCRASQGISNNLNWY 209
Query: 59 QQKPGKAPKFLTYRASSLQRGMPSQFSGSGYGRDFTLTVSSLQPEDFATY 108
QQKP K PK L Y ASSLQ G+PS+FS SG G D+TLT+SSLQPEDFATY
Sbjct: 210 QQKPRKTPKLLIYAASSLQSGIPSRFSDSGSGTDYTLTISSLQPEDFATY 259
>gi|239747814 PREDICTED: hypothetical protein XP_002348323 [Homo
sapiens]
Length = 162
Score = 139 bits (349), Expect = 6e-34
Identities = 68/89 (76%), Positives = 74/89 (83%)
Query: 20 ARCDIQMTQPPSSLSASVGDRVTVSCQASQSIYNYLNWYQQKPGKAPKFLTYRASSLQRG 79
ARC IQMTQPPSSLSASVGD VT++C+ASQS N L WYQQKPGKAPK L YR SSLQ G
Sbjct: 70 ARCAIQMTQPPSSLSASVGDSVTITCRASQSFTNQLAWYQQKPGKAPKLLIYRVSSLQTG 129
Query: 80 MPSQFSGSGYGRDFTLTVSSLQPEDFATY 108
+PS FSGS G DFTLT+SSLQP+D ATY
Sbjct: 130 VPSLFSGSESGTDFTLTISSLQPDDVATY 158
Score = 28.9 bits (63), Expect = 0.93
Identities = 16/41 (39%), Positives = 22/41 (53%)
Query: 59 QQKPGKAPKFLTYRASSLQRGMPSQFSGSGYGRDFTLTVSS 99
QQKPG+ P+ L + A + +P S G FTLT S+
Sbjct: 30 QQKPGQDPQLLKHGAFTRATDIPVGLSSCESGMYFTLTNSA 70
>gi|169163270 PREDICTED: similar to hCG2043206 [Homo sapiens]
Length = 151
Score = 134 bits (336), Expect = 2e-32
Identities = 67/107 (62%), Positives = 83/107 (77%), Gaps = 1/107 (0%)
Query: 3 MRIPAQLLAFLLLCLPDARCDIQMTQPPSSLSASVGDRVTVSCQASQSIYN-YLNWYQQK 61
M PAQLL LLL LPD +I MTQ P++LS S G+R T+SC+ASQS+ + YL+WYQQK
Sbjct: 1 MEAPAQLLFLLLLWLPDTTGEIVMTQSPATLSLSPGERATLSCRASQSVSSSYLSWYQQK 60
Query: 62 PGKAPKFLTYRASSLQRGMPSQFSGSGYGRDFTLTVSSLQPEDFATY 108
PG+AP+ L Y AS+ G+P++FSGSG G DFTLT+SSLQPEDFA Y
Sbjct: 61 PGQAPRLLIYGASTRATGIPARFSGSGSGTDFTLTISSLQPEDFAVY 107
>gi|239753212 PREDICTED: similar to hCG1686089 [Homo sapiens]
Length = 152
Score = 127 bits (318), Expect = 3e-30
Identities = 65/107 (60%), Positives = 78/107 (72%), Gaps = 1/107 (0%)
Query: 3 MRIPAQLLAFLLLCLPDARCDIQMTQPPSSLSASVGDRVTVSCQASQSIYN-YLNWYQQK 61
M PAQLL LLL LPD +I +TQ P++LS S G+R T+SC ASQS+ + YL WYQQK
Sbjct: 1 METPAQLLFLLLLWLPDTTGEIVLTQSPATLSLSPGERATLSCGASQSVSSSYLAWYQQK 60
Query: 62 PGKAPKFLTYRASSLQRGMPSQFSGSGYGRDFTLTVSSLQPEDFATY 108
PG AP+ L Y ASS G+P +FSGSG G DFTLT+S L+PEDFA Y
Sbjct: 61 PGLAPRLLIYDASSRATGIPDRFSGSGSGTDFTLTISRLEPEDFAVY 107
>gi|239749464 PREDICTED: hypothetical protein XP_002347049 [Homo
sapiens]
Length = 152
Score = 127 bits (318), Expect = 3e-30
Identities = 65/107 (60%), Positives = 78/107 (72%), Gaps = 1/107 (0%)
Query: 3 MRIPAQLLAFLLLCLPDARCDIQMTQPPSSLSASVGDRVTVSCQASQSIYN-YLNWYQQK 61
M PAQLL LLL LPD +I +TQ P++LS S G+R T+SC ASQS+ + YL WYQQK
Sbjct: 1 METPAQLLFLLLLWLPDTTGEIVLTQSPATLSLSPGERATLSCGASQSVSSSYLAWYQQK 60
Query: 62 PGKAPKFLTYRASSLQRGMPSQFSGSGYGRDFTLTVSSLQPEDFATY 108
PG AP+ L Y ASS G+P +FSGSG G DFTLT+S L+PEDFA Y
Sbjct: 61 PGLAPRLLIYDASSRATGIPDRFSGSGSGTDFTLTISRLEPEDFAVY 107
>gi|239753214 PREDICTED: similar to hCG2043206 [Homo sapiens]
Length = 157
Score = 125 bits (313), Expect = 1e-29
Identities = 66/112 (58%), Positives = 82/112 (73%), Gaps = 6/112 (5%)
Query: 3 MRIPAQLLAFLLLCLPDA-----RCDIQMTQPPSSLSASVGDRVTVSCQASQSIYN-YLN 56
M PAQLL LLL LP +I MTQ P++LS S G+R T+SC+ASQS+ + YL+
Sbjct: 1 MEAPAQLLFLLLLWLPGEGNMRYHGEIVMTQSPATLSLSPGERATLSCRASQSVSSSYLS 60
Query: 57 WYQQKPGKAPKFLTYRASSLQRGMPSQFSGSGYGRDFTLTVSSLQPEDFATY 108
WYQQKPG+AP+ L Y AS+ G+P++FSGSG G DFTLT+SSLQPEDFA Y
Sbjct: 61 WYQQKPGQAPRLLIYGASTRATGIPARFSGSGSGTDFTLTISSLQPEDFAVY 112
>gi|169215700 PREDICTED: hypothetical protein [Homo sapiens]
Length = 373
Score = 103 bits (257), Expect = 3e-23
Identities = 59/105 (56%), Positives = 66/105 (62%), Gaps = 10/105 (9%)
Query: 4 RIPAQLLAFLLLCLPDARCDIQMTQPPSSLSASVGDRVTVSCQASQSIYNYLNWYQQKPG 63
R P QLL L L LP R DIQMTQ PSSLSASVGDRVT++CQ S SI N L WYQQKPG
Sbjct: 149 RAPTQLLGLLGLWLPGTRRDIQMTQSPSSLSASVGDRVTITCQVSHSISNKLVWYQQKPG 208
Query: 64 KAPKFLTYRASSLQRGMPSQFSGSGYGRDFTLTVSSLQPEDFATY 108
KAP L + A+ LQ G+ S + SLQ +D ATY
Sbjct: 209 KAPTLLIHAATKLQTGISLSPSAA----------CSLQRDDLATY 243
Score = 42.0 bits (97), Expect = 1e-04
Identities = 23/42 (54%), Positives = 26/42 (61%)
Query: 28 QPPSSLSASVGDRVTVSCQASQSIYNYLNWYQQKPGKAPKFL 69
QP S L R ++ C SQSI + L WYQQKPGKAP FL
Sbjct: 331 QPFSWLLTVKRKRDSLICVCSQSIGSSLAWYQQKPGKAPWFL 372
>gi|169216113 PREDICTED: hypothetical protein [Homo sapiens]
Length = 373
Score = 103 bits (257), Expect = 3e-23
Identities = 59/105 (56%), Positives = 66/105 (62%), Gaps = 10/105 (9%)
Query: 4 RIPAQLLAFLLLCLPDARCDIQMTQPPSSLSASVGDRVTVSCQASQSIYNYLNWYQQKPG 63
R P QLL L L LP R DIQMTQ PSSLSASVGDRVT++CQ S SI N L WYQQKPG
Sbjct: 149 RAPTQLLGLLGLWLPGTRRDIQMTQSPSSLSASVGDRVTITCQVSHSISNKLVWYQQKPG 208
Query: 64 KAPKFLTYRASSLQRGMPSQFSGSGYGRDFTLTVSSLQPEDFATY 108
KAP L + A+ LQ G+ S + SLQ +D ATY
Sbjct: 209 KAPTLLIHAATKLQTGISLSPSAA----------CSLQRDDLATY 243
Score = 42.0 bits (97), Expect = 1e-04
Identities = 23/42 (54%), Positives = 26/42 (61%)
Query: 28 QPPSSLSASVGDRVTVSCQASQSIYNYLNWYQQKPGKAPKFL 69
QP S L R ++ C SQSI + L WYQQKPGKAP FL
Sbjct: 331 QPFSWLLTVKRKRDSLICVCSQSIGSSLAWYQQKPGKAPWFL 372
>gi|169215489 PREDICTED: hypothetical protein [Homo sapiens]
Length = 373
Score = 103 bits (257), Expect = 3e-23
Identities = 59/105 (56%), Positives = 66/105 (62%), Gaps = 10/105 (9%)
Query: 4 RIPAQLLAFLLLCLPDARCDIQMTQPPSSLSASVGDRVTVSCQASQSIYNYLNWYQQKPG 63
R P QLL L L LP R DIQMTQ PSSLSASVGDRVT++CQ S SI N L WYQQKPG
Sbjct: 149 RAPTQLLGLLGLWLPGTRRDIQMTQSPSSLSASVGDRVTITCQVSHSISNKLVWYQQKPG 208
Query: 64 KAPKFLTYRASSLQRGMPSQFSGSGYGRDFTLTVSSLQPEDFATY 108
KAP L + A+ LQ G+ S + SLQ +D ATY
Sbjct: 209 KAPTLLIHAATKLQTGISLSPSAA----------CSLQRDDLATY 243
Score = 42.0 bits (97), Expect = 1e-04
Identities = 23/42 (54%), Positives = 26/42 (61%)
Query: 28 QPPSSLSASVGDRVTVSCQASQSIYNYLNWYQQKPGKAPKFL 69
QP S L R ++ C SQSI + L WYQQKPGKAP FL
Sbjct: 331 QPFSWLLTVKRKRDSLICVCSQSIGSSLAWYQQKPGKAPWFL 372
>gi|239757668 PREDICTED: similar to Ig lambda chain [Homo sapiens]
Length = 288
Score = 79.7 bits (195), Expect = 5e-16
Identities = 39/82 (47%), Positives = 53/82 (64%), Gaps = 3/82 (3%)
Query: 30 PSSLSASVGDRVTVSCQASQSI---YNYLNWYQQKPGKAPKFLTYRASSLQRGMPSQFSG 86
P+S+S S G +T+SC + S YNY++WYQQ PGKAPK + Y S+ G+ ++FSG
Sbjct: 26 PASVSGSPGQSITISCTGTSSDVGGYNYVSWYQQHPGKAPKLMIYDVSNRPSGVSNRFSG 85
Query: 87 SGYGRDFTLTVSSLQPEDFATY 108
S G +LT+S LQ ED A Y
Sbjct: 86 SKSGNTASLTISGLQAEDEADY 107
Score = 63.9 bits (154), Expect = 3e-11
Identities = 32/84 (38%), Positives = 46/84 (54%), Gaps = 1/84 (1%)
Query: 25 QMTQPPSSLSASVGDRVTVSCQASQSIYNYLNWYQQKPGKAPKFLTYRASSLQRGMPSQF 84
++TQPP+ +S S G +SC NY +WY QKPG+AP + Y+ G+P +F
Sbjct: 200 ELTQPPA-VSVSPGQTARISCSGDVLRDNYADWYPQKPGQAPVLVIYKDGERPSGIPERF 258
Query: 85 SGSGYGRDFTLTVSSLQPEDFATY 108
SGS G LT+S + + A Y
Sbjct: 259 SGSTSGNTTALTISRVLTKGGADY 282
>gi|239752152 PREDICTED: hypothetical protein XP_002348153 [Homo
sapiens]
Length = 264
Score = 77.8 bits (190), Expect = 2e-15
Identities = 42/85 (49%), Positives = 52/85 (61%), Gaps = 3/85 (3%)
Query: 26 MTQPPSSLSASVGDRVTVSCQASQSIY--NYLNWYQQKPGKAPKFLTYRASSLQRGMPSQ 83
+TQPPS+ S + G RVT+SC S S N +NWYQQ PG APK L Y + G+P +
Sbjct: 49 LTQPPSA-SGTPGQRVTISCSGSSSNIGSNTVNWYQQLPGTAPKLLIYSNNQRPSGVPDR 107
Query: 84 FSGSGYGRDFTLTVSSLQPEDFATY 108
FSGS G +L +S LQ ED A Y
Sbjct: 108 FSGSKSGTSASLAISGLQSEDEADY 132
>gi|239757664 PREDICTED: similar to hCG2040019 [Homo sapiens]
Length = 645
Score = 76.3 bits (186), Expect = 5e-15
Identities = 41/100 (41%), Positives = 54/100 (54%), Gaps = 2/100 (2%)
Query: 9 LLAFLLLCLPDARCDIQMTQPPSSLSASVGDRVTVSCQASQSIYNYLNWYQQKPGKAPKF 68
LL L+LC ++TQP SS+S S G ++C Y W+QQKPG+AP
Sbjct: 476 LLPLLILCTVSV-ASYELTQP-SSVSVSPGQTARITCSGDVLAKKYARWFQQKPGQAPVL 533
Query: 69 LTYRASSLQRGMPSQFSGSGYGRDFTLTVSSLQPEDFATY 108
+ Y+ S G+P +FSGS G TLT+S Q ED A Y
Sbjct: 534 VIYKDSERPSGIPERFSGSSSGTTVTLTISGAQVEDEADY 573
>gi|239757666 PREDICTED: similar to hCG2040021 [Homo sapiens]
Length = 137
Score = 65.5 bits (158), Expect = 9e-12
Identities = 33/83 (39%), Positives = 48/83 (57%), Gaps = 1/83 (1%)
Query: 26 MTQPPSSLSASVGDRVTVSCQASQSIYNYLNWYQQKPGKAPKFLTYRASSLQRGMPSQFS 85
+TQPPS +S + G ++C + ++WYQQKPG+AP + Y S G+P +FS
Sbjct: 23 LTQPPS-VSVAPGKTARITCGGNNIGSKSVHWYQQKPGQAPVLVVYDDSDRPSGIPERFS 81
Query: 86 GSGYGRDFTLTVSSLQPEDFATY 108
GS G TLT+S ++ D A Y
Sbjct: 82 GSNSGNTATLTISRVEAGDEADY 104
>gi|169217719 PREDICTED: similar to hCG96018 [Homo sapiens]
Length = 150
Score = 53.1 bits (126), Expect = 5e-08
Identities = 42/108 (38%), Positives = 61/108 (56%), Gaps = 13/108 (12%)
Query: 14 LLCLPDARCDIQMTQP----PSSLSASVGD--RVTVSCQASQSIYNY-LNWYQQKPGKAP 66
LL L + C ++QP P+SLSAS G R T + ++ ++ Y + WYQQKPG P
Sbjct: 6 LLLLFLSHCTGSLSQPVLTQPTSLSASPGASARFTCTLRSGINVGTYRIYWYQQKPGSLP 65
Query: 67 KF-LTYRASSLQR---GMPSQFSGS--GYGRDFTLTVSSLQPEDFATY 108
++ L Y++ S ++ G+PS+FSGS L +S LQ ED A Y
Sbjct: 66 RYLLRYKSDSDKQQGSGVPSRFSGSKDASTNAGLLLISGLQSEDEADY 113
>gi|89062025 PREDICTED: similar to hCG96018 [Homo sapiens]
Length = 150
Score = 53.1 bits (126), Expect = 5e-08
Identities = 42/108 (38%), Positives = 61/108 (56%), Gaps = 13/108 (12%)
Query: 14 LLCLPDARCDIQMTQP----PSSLSASVGD--RVTVSCQASQSIYNY-LNWYQQKPGKAP 66
LL L + C ++QP P+SLSAS G R T + ++ ++ Y + WYQQKPG P
Sbjct: 6 LLLLFLSHCTGSLSQPVLTQPTSLSASPGASARFTCTLRSGINVGTYRIYWYQQKPGSLP 65
Query: 67 KF-LTYRASSLQR---GMPSQFSGS--GYGRDFTLTVSSLQPEDFATY 108
++ L Y++ S ++ G+PS+FSGS L +S LQ ED A Y
Sbjct: 66 RYLLRYKSDSDKQQGSGVPSRFSGSKDASTNAGLLLISGLQSEDEADY 113
Database: hs.faa
Posted date: Aug 4, 2009 4:42 PM
Number of letters in database: 18,247,518
Number of sequences in database: 37,866
Lambda K H
0.320 0.132 0.398
Gapped
Lambda K H
0.267 0.0410 0.140
Matrix: BLOSUM62
Gap Penalties: Existence: 11, Extension: 1
Number of Hits to DB: 4,295,911
Number of Sequences: 37866
Number of extensions: 164648
Number of successful extensions: 674
Number of sequences better than 10.0: 30
Number of HSP's better than 10.0 without gapping: 61
Number of HSP's successfully gapped in prelim test: 46
Number of HSP's that attempted gapping in prelim test: 575
Number of HSP's gapped (non-prelim): 124
length of query: 108
length of database: 18,247,518
effective HSP length: 78
effective length of query: 30
effective length of database: 15,293,970
effective search space: 458819100
effective search space used: 458819100
T: 11
A: 40
X1: 16 ( 7.4 bits)
X2: 38 (14.6 bits)
X3: 64 (24.7 bits)
S1: 41 (21.8 bits)
S2: 55 (25.8 bits)
Search results were obtained with NCBI BLAST and RefSeq entries.
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Guide to the Human Genome
Copyright © 2010 by Stewart Scherer. All rights reserved.