Home |
Table of Contents |
Search text |
Search genes |
Search sequences |
Purchase |
FAQ |
Blog |
Help
Search of human proteins with 239747046
BLASTP 2.2.11 [Jun-05-2005]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= gi|239747046 PREDICTED: hypothetical protein XP_002344260 [Homo
sapiens]
(97 letters)
Database: hs.faa
37,866 sequences; 18,247,518 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
gi|239747060 PREDICTED: hypothetical protein XP_002344267 [Homo ... 233 2e-62
gi|239747046 PREDICTED: hypothetical protein XP_002344260 [Homo ... 233 2e-62
gi|239747068 PREDICTED: hypothetical protein XP_002344271 [Homo ... 231 1e-61
gi|239747056 PREDICTED: hypothetical protein XP_002344265 [Homo ... 231 1e-61
gi|239747044 PREDICTED: hypothetical protein XP_002344259 [Homo ... 231 1e-61
gi|239747038 PREDICTED: hypothetical protein XP_002344256 [Homo ... 231 1e-61
gi|239747040 PREDICTED: hypothetical protein XP_002344257 [Homo ... 230 2e-61
gi|239747050 PREDICTED: hypothetical protein XP_002344262 [Homo ... 228 6e-61
gi|239747048 PREDICTED: hypothetical protein XP_002344261 [Homo ... 227 1e-60
gi|239747064 PREDICTED: hypothetical protein XP_002344269 [Homo ... 227 2e-60
gi|239747066 PREDICTED: hypothetical protein XP_002344270 [Homo ... 218 6e-58
gi|239747062 PREDICTED: hypothetical protein XP_002344268 [Homo ... 67 4e-12
gi|239747072 PREDICTED: hypothetical protein XP_002344273 [Homo ... 66 5e-12
gi|239747070 PREDICTED: hypothetical protein XP_002344272 [Homo ... 66 5e-12
gi|239747058 PREDICTED: hypothetical protein XP_002344266 [Homo ... 66 5e-12
gi|239747054 PREDICTED: hypothetical protein XP_002344264 [Homo ... 66 5e-12
gi|239747052 PREDICTED: hypothetical protein XP_002344263 [Homo ... 66 5e-12
gi|239747042 PREDICTED: hypothetical protein XP_002344258 [Homo ... 66 5e-12
gi|239755734 PREDICTED: similar to Nanog homeobox isoform 2 [Hom... 36 0.006
gi|239755286 PREDICTED: similar to hCG1742442 [Homo sapiens] 33 0.064
gi|153945816 Nanog homeobox [Homo sapiens] 30 0.32
gi|239755732 PREDICTED: similar to Nanog homeobox isoform 1 [Hom... 30 0.32
gi|239757861 PREDICTED: similar to armadillo repeat containing, ... 28 1.2
gi|4557493 cleavage stimulation factor subunit 2 [Homo sapiens] 28 1.6
gi|110611228 utrophin [Homo sapiens] 28 1.6
gi|29294615 sweet taste receptor T1r isoform b [Homo sapiens] 28 2.1
gi|29294621 sweet taste receptor T1r isoform d [Homo sapiens] 28 2.1
gi|29294619 sweet taste receptor T1r isoform c [Homo sapiens] 28 2.1
gi|156523264 hypothetical protein LOC112752 isoform 2 [Homo sapi... 28 2.1
gi|156523262 hypothetical protein LOC112752 isoform 1 [Homo sapi... 28 2.1
>gi|239747060 PREDICTED: hypothetical protein XP_002344267 [Homo
sapiens]
Length = 97
Score = 233 bits (595), Expect = 2e-62
Identities = 97/97 (100%), Positives = 97/97 (100%)
Query: 1 MESNQWNQIKWNGKELNGVDGIGWDWNEMYWKGLEFHETEWNELERNGLEWNGMSWDGIK 60
MESNQWNQIKWNGKELNGVDGIGWDWNEMYWKGLEFHETEWNELERNGLEWNGMSWDGIK
Sbjct: 1 MESNQWNQIKWNGKELNGVDGIGWDWNEMYWKGLEFHETEWNELERNGLEWNGMSWDGIK 60
Query: 61 WNDIKWNGIECNGMLWNGMECIGMECPLMEWIRVEWN 97
WNDIKWNGIECNGMLWNGMECIGMECPLMEWIRVEWN
Sbjct: 61 WNDIKWNGIECNGMLWNGMECIGMECPLMEWIRVEWN 97
>gi|239747046 PREDICTED: hypothetical protein XP_002344260 [Homo
sapiens]
Length = 97
Score = 233 bits (595), Expect = 2e-62
Identities = 97/97 (100%), Positives = 97/97 (100%)
Query: 1 MESNQWNQIKWNGKELNGVDGIGWDWNEMYWKGLEFHETEWNELERNGLEWNGMSWDGIK 60
MESNQWNQIKWNGKELNGVDGIGWDWNEMYWKGLEFHETEWNELERNGLEWNGMSWDGIK
Sbjct: 1 MESNQWNQIKWNGKELNGVDGIGWDWNEMYWKGLEFHETEWNELERNGLEWNGMSWDGIK 60
Query: 61 WNDIKWNGIECNGMLWNGMECIGMECPLMEWIRVEWN 97
WNDIKWNGIECNGMLWNGMECIGMECPLMEWIRVEWN
Sbjct: 61 WNDIKWNGIECNGMLWNGMECIGMECPLMEWIRVEWN 97
>gi|239747068 PREDICTED: hypothetical protein XP_002344271 [Homo
sapiens]
Length = 97
Score = 231 bits (588), Expect = 1e-61
Identities = 96/97 (98%), Positives = 96/97 (98%)
Query: 1 MESNQWNQIKWNGKELNGVDGIGWDWNEMYWKGLEFHETEWNELERNGLEWNGMSWDGIK 60
MESNQWNQIKWNGKELNGVDGIGWDWNEMYWKGLEFHETEWNELERNGLEWNGMSWDGIK
Sbjct: 1 MESNQWNQIKWNGKELNGVDGIGWDWNEMYWKGLEFHETEWNELERNGLEWNGMSWDGIK 60
Query: 61 WNDIKWNGIECNGMLWNGMECIGMECPLMEWIRVEWN 97
WN IKWNGIECNGMLWNGMECIGMECPLMEWIRVEWN
Sbjct: 61 WNGIKWNGIECNGMLWNGMECIGMECPLMEWIRVEWN 97
>gi|239747056 PREDICTED: hypothetical protein XP_002344265 [Homo
sapiens]
Length = 97
Score = 231 bits (588), Expect = 1e-61
Identities = 96/97 (98%), Positives = 96/97 (98%)
Query: 1 MESNQWNQIKWNGKELNGVDGIGWDWNEMYWKGLEFHETEWNELERNGLEWNGMSWDGIK 60
MESNQWNQIKWNGKELNGVDGIGWDWNEMYWKGLEFHETEWNELERNGLEWNGMSWDGIK
Sbjct: 1 MESNQWNQIKWNGKELNGVDGIGWDWNEMYWKGLEFHETEWNELERNGLEWNGMSWDGIK 60
Query: 61 WNDIKWNGIECNGMLWNGMECIGMECPLMEWIRVEWN 97
WN IKWNGIECNGMLWNGMECIGMECPLMEWIRVEWN
Sbjct: 61 WNGIKWNGIECNGMLWNGMECIGMECPLMEWIRVEWN 97
>gi|239747044 PREDICTED: hypothetical protein XP_002344259 [Homo
sapiens]
Length = 97
Score = 231 bits (588), Expect = 1e-61
Identities = 96/97 (98%), Positives = 96/97 (98%)
Query: 1 MESNQWNQIKWNGKELNGVDGIGWDWNEMYWKGLEFHETEWNELERNGLEWNGMSWDGIK 60
MESNQWNQIKWNGKELNGVDGIGWDWNEMYWKGLEFHETEWNELERNGLEWNGMSWDGIK
Sbjct: 1 MESNQWNQIKWNGKELNGVDGIGWDWNEMYWKGLEFHETEWNELERNGLEWNGMSWDGIK 60
Query: 61 WNDIKWNGIECNGMLWNGMECIGMECPLMEWIRVEWN 97
WN IKWNGIECNGMLWNGMECIGMECPLMEWIRVEWN
Sbjct: 61 WNGIKWNGIECNGMLWNGMECIGMECPLMEWIRVEWN 97
>gi|239747038 PREDICTED: hypothetical protein XP_002344256 [Homo
sapiens]
Length = 97
Score = 231 bits (588), Expect = 1e-61
Identities = 96/97 (98%), Positives = 96/97 (98%)
Query: 1 MESNQWNQIKWNGKELNGVDGIGWDWNEMYWKGLEFHETEWNELERNGLEWNGMSWDGIK 60
MESNQWNQIKWNGKELNGVDGIGWDWNEMYWKGLEFHETEWNELERNGLEWNGMSWDGIK
Sbjct: 1 MESNQWNQIKWNGKELNGVDGIGWDWNEMYWKGLEFHETEWNELERNGLEWNGMSWDGIK 60
Query: 61 WNDIKWNGIECNGMLWNGMECIGMECPLMEWIRVEWN 97
WN IKWNGIECNGMLWNGMECIGMECPLMEWIRVEWN
Sbjct: 61 WNGIKWNGIECNGMLWNGMECIGMECPLMEWIRVEWN 97
>gi|239747040 PREDICTED: hypothetical protein XP_002344257 [Homo
sapiens]
Length = 97
Score = 230 bits (587), Expect = 2e-61
Identities = 96/97 (98%), Positives = 96/97 (98%)
Query: 1 MESNQWNQIKWNGKELNGVDGIGWDWNEMYWKGLEFHETEWNELERNGLEWNGMSWDGIK 60
MESNQWNQIKWNGKELNGVD IGWDWNEMYWKGLEFHETEWNELERNGLEWNGMSWDGIK
Sbjct: 1 MESNQWNQIKWNGKELNGVDWIGWDWNEMYWKGLEFHETEWNELERNGLEWNGMSWDGIK 60
Query: 61 WNDIKWNGIECNGMLWNGMECIGMECPLMEWIRVEWN 97
WNDIKWNGIECNGMLWNGMECIGMECPLMEWIRVEWN
Sbjct: 61 WNDIKWNGIECNGMLWNGMECIGMECPLMEWIRVEWN 97
>gi|239747050 PREDICTED: hypothetical protein XP_002344262 [Homo
sapiens]
Length = 97
Score = 228 bits (582), Expect = 6e-61
Identities = 96/97 (98%), Positives = 96/97 (98%)
Query: 1 MESNQWNQIKWNGKELNGVDGIGWDWNEMYWKGLEFHETEWNELERNGLEWNGMSWDGIK 60
MESNQWNQIKWNGKELNGVDGIGWDWNEMYWKGLEFHETEWNELERNGLEWNGMSWDGIK
Sbjct: 1 MESNQWNQIKWNGKELNGVDGIGWDWNEMYWKGLEFHETEWNELERNGLEWNGMSWDGIK 60
Query: 61 WNDIKWNGIECNGMLWNGMECIGMECPLMEWIRVEWN 97
WNDIKWNGIECNGMLWNGMECIGMECPLMEWIRVE N
Sbjct: 61 WNDIKWNGIECNGMLWNGMECIGMECPLMEWIRVECN 97
>gi|239747048 PREDICTED: hypothetical protein XP_002344261 [Homo
sapiens]
Length = 97
Score = 227 bits (579), Expect = 1e-60
Identities = 95/97 (97%), Positives = 95/97 (97%)
Query: 1 MESNQWNQIKWNGKELNGVDGIGWDWNEMYWKGLEFHETEWNELERNGLEWNGMSWDGIK 60
MESNQWNQIKWNGKELNGVDGIGWDWNEMYWKGLEF ETEWNELERNGLEWNGMSWDGIK
Sbjct: 1 MESNQWNQIKWNGKELNGVDGIGWDWNEMYWKGLEFDETEWNELERNGLEWNGMSWDGIK 60
Query: 61 WNDIKWNGIECNGMLWNGMECIGMECPLMEWIRVEWN 97
WN IKWNGIECNGMLWNGMECIGMECPLMEWIRVEWN
Sbjct: 61 WNGIKWNGIECNGMLWNGMECIGMECPLMEWIRVEWN 97
>gi|239747064 PREDICTED: hypothetical protein XP_002344269 [Homo
sapiens]
Length = 97
Score = 227 bits (578), Expect = 2e-60
Identities = 95/97 (97%), Positives = 95/97 (97%)
Query: 1 MESNQWNQIKWNGKELNGVDGIGWDWNEMYWKGLEFHETEWNELERNGLEWNGMSWDGIK 60
MESNQWNQIKWNGKELNGVDGIGWDWNEMYWKGLEFHETEWNELERNGLEWNGMSWDGIK
Sbjct: 1 MESNQWNQIKWNGKELNGVDGIGWDWNEMYWKGLEFHETEWNELERNGLEWNGMSWDGIK 60
Query: 61 WNDIKWNGIECNGMLWNGMECIGMECPLMEWIRVEWN 97
WN IKWNGIECNGMLWNGMECIGME PLMEWIRVEWN
Sbjct: 61 WNGIKWNGIECNGMLWNGMECIGMESPLMEWIRVEWN 97
>gi|239747066 PREDICTED: hypothetical protein XP_002344270 [Homo
sapiens]
Length = 97
Score = 218 bits (556), Expect = 6e-58
Identities = 93/97 (95%), Positives = 94/97 (96%)
Query: 1 MESNQWNQIKWNGKELNGVDGIGWDWNEMYWKGLEFHETEWNELERNGLEWNGMSWDGIK 60
MESNQWNQIKWNGKELNGVDGIGWDWNEMYWKGLEFHETEWNELERNGLEWNGMSWDGIK
Sbjct: 1 MESNQWNQIKWNGKELNGVDGIGWDWNEMYWKGLEFHETEWNELERNGLEWNGMSWDGIK 60
Query: 61 WNDIKWNGIECNGMLWNGMECIGMECPLMEWIRVEWN 97
N IKWNGIEC+GMLWNGMECIGMECPLME IRVEWN
Sbjct: 61 CNGIKWNGIECSGMLWNGMECIGMECPLMERIRVEWN 97
>gi|239747062 PREDICTED: hypothetical protein XP_002344268 [Homo
sapiens]
Length = 134
Score = 66.6 bits (161), Expect = 4e-12
Identities = 34/96 (35%), Positives = 52/96 (54%), Gaps = 5/96 (5%)
Query: 7 NQIKWNGKELNGVDGIGWDWNEMYWKGLEFHETEWNELERNGLEWNGMSWDGIKWNDIKW 66
N + WNG N + + N M +K +E E N +E NG+E NGM +G+K ++
Sbjct: 4 NGMVWNGMNTNVMQPNRMESNGMEYKEMESKRMETNGMELNGMELNGMGTNGVKLYAVEE 63
Query: 67 NGIEC-----NGMLWNGMECIGMECPLMEWIRVEWN 97
N +EC NG+ WNG+ G EC +M+ ++WN
Sbjct: 64 NRMECKRKERNGLEWNGIHWNGRECSVMDRSGIKWN 99
Score = 62.4 bits (150), Expect = 8e-11
Identities = 37/104 (35%), Positives = 57/104 (54%), Gaps = 7/104 (6%)
Query: 1 MESN-------QWNQIKWNGKELNGVDGIGWDWNEMYWKGLEFHETEWNELERNGLEWNG 53
MESN + +++ NG ELNG++ G N + +E + E ERNGLEWNG
Sbjct: 21 MESNGMEYKEMESKRMETNGMELNGMELNGMGTNGVKLYAVEENRMECKRKERNGLEWNG 80
Query: 54 MSWDGIKWNDIKWNGIECNGMLWNGMECIGMECPLMEWIRVEWN 97
+ W+G + + + +GI+ N + NG++ GMEC E +E N
Sbjct: 81 IHWNGRECSVMDRSGIKWNATVSNGIKMYGMECNETESNVIECN 124
Score = 51.6 bits (122), Expect = 1e-07
Identities = 23/56 (41%), Positives = 33/56 (58%)
Query: 5 QWNQIKWNGKELNGVDGIGWDWNEMYWKGLEFHETEWNELERNGLEWNGMSWDGIK 60
+WN I WNG+E + +D G WN G++ + E NE E N +E NGM +GI+
Sbjct: 77 EWNGIHWNGRECSVMDRSGIKWNATVSNGIKMYGMECNETESNVIECNGMQKNGIQ 132
Score = 48.5 bits (114), Expect = 1e-06
Identities = 26/79 (32%), Positives = 46/79 (58%), Gaps = 15/79 (18%)
Query: 7 NQIKWNGKELNGVDGIGWDWNEMYWKGLEFHETEWNELERNGLEW-----NGMSWDGIKW 61
N+++ KE NG++ WN ++W G E + ++R+G++W NG+ G++
Sbjct: 64 NRMECKRKERNGLE-----WNGIHWNG-----RECSVMDRSGIKWNATVSNGIKMYGMEC 113
Query: 62 NDIKWNGIECNGMLWNGME 80
N+ + N IECNGM NG++
Sbjct: 114 NETESNVIECNGMQKNGIQ 132
Score = 37.7 bits (86), Expect = 0.002
Identities = 23/79 (29%), Positives = 37/79 (46%), Gaps = 15/79 (18%)
Query: 34 LEFHETEWNELERNGLEWNGMSWDGIKWNDIKWNGIECNGMLWNGMECIG---------- 83
+E + WN + N ++ N M +G+++ +++ +E NGM NGME G
Sbjct: 1 MESNGMVWNGMNTNVMQPNRMESNGMEYKEMESKRMETNGMELNGMELNGMGTNGVKLYA 60
Query: 84 -----MECPLMEWIRVEWN 97
MEC E +EWN
Sbjct: 61 VEENRMECKRKERNGLEWN 79
>gi|239747072 PREDICTED: hypothetical protein XP_002344273 [Homo
sapiens]
Length = 134
Score = 66.2 bits (160), Expect = 5e-12
Identities = 34/96 (35%), Positives = 52/96 (54%), Gaps = 5/96 (5%)
Query: 7 NQIKWNGKELNGVDGIGWDWNEMYWKGLEFHETEWNELERNGLEWNGMSWDGIKWNDIKW 66
N + WNG N + + N M +K +E E N +E NG+E NGM +G+K ++
Sbjct: 4 NGMVWNGMNTNVMQPNRMESNGMEYKEMESKRMETNGMELNGMELNGMGTNGVKLYAVEE 63
Query: 67 NGIEC-----NGMLWNGMECIGMECPLMEWIRVEWN 97
N +EC NG+ WNG+ G EC +M+ ++WN
Sbjct: 64 NRMECKRKERNGLEWNGIHWNGRECSVMDRPGIKWN 99
Score = 61.2 bits (147), Expect = 2e-10
Identities = 40/107 (37%), Positives = 54/107 (50%), Gaps = 22/107 (20%)
Query: 1 MESN-------QWNQIKWNGKELNGVDGIGWDWNEMYWKGLEFHETEWNELERNGLEWNG 53
MESN + +++ NG ELNG++ G N + +E + E ERNGLEWNG
Sbjct: 21 MESNGMEYKEMESKRMETNGMELNGMELNGMGTNGVKLYAVEENRMECKRKERNGLEWNG 80
Query: 54 MSWD----------GIKW-----NDIKWNGIECNGMLWNGMECIGME 85
+ W+ GIKW N IK G+ECN N +EC GM+
Sbjct: 81 IHWNGRECSVMDRPGIKWNATVSNGIKMYGMECNETESNVIECNGMQ 127
Score = 51.2 bits (121), Expect = 2e-07
Identities = 23/56 (41%), Positives = 33/56 (58%)
Query: 5 QWNQIKWNGKELNGVDGIGWDWNEMYWKGLEFHETEWNELERNGLEWNGMSWDGIK 60
+WN I WNG+E + +D G WN G++ + E NE E N +E NGM +GI+
Sbjct: 77 EWNGIHWNGRECSVMDRPGIKWNATVSNGIKMYGMECNETESNVIECNGMQKNGIQ 132
Score = 47.4 bits (111), Expect = 3e-06
Identities = 26/79 (32%), Positives = 45/79 (56%), Gaps = 15/79 (18%)
Query: 7 NQIKWNGKELNGVDGIGWDWNEMYWKGLEFHETEWNELERNGLEW-----NGMSWDGIKW 61
N+++ KE NG++ WN ++W G E + ++R G++W NG+ G++
Sbjct: 64 NRMECKRKERNGLE-----WNGIHWNG-----RECSVMDRPGIKWNATVSNGIKMYGMEC 113
Query: 62 NDIKWNGIECNGMLWNGME 80
N+ + N IECNGM NG++
Sbjct: 114 NETESNVIECNGMQKNGIQ 132
Score = 37.7 bits (86), Expect = 0.002
Identities = 23/79 (29%), Positives = 37/79 (46%), Gaps = 15/79 (18%)
Query: 34 LEFHETEWNELERNGLEWNGMSWDGIKWNDIKWNGIECNGMLWNGMECIG---------- 83
+E + WN + N ++ N M +G+++ +++ +E NGM NGME G
Sbjct: 1 MESNGMVWNGMNTNVMQPNRMESNGMEYKEMESKRMETNGMELNGMELNGMGTNGVKLYA 60
Query: 84 -----MECPLMEWIRVEWN 97
MEC E +EWN
Sbjct: 61 VEENRMECKRKERNGLEWN 79
>gi|239747070 PREDICTED: hypothetical protein XP_002344272 [Homo
sapiens]
Length = 134
Score = 66.2 bits (160), Expect = 5e-12
Identities = 34/96 (35%), Positives = 52/96 (54%), Gaps = 5/96 (5%)
Query: 7 NQIKWNGKELNGVDGIGWDWNEMYWKGLEFHETEWNELERNGLEWNGMSWDGIKWNDIKW 66
N + WNG N + + N M +K +E E N +E NG+E NGM +G+K ++
Sbjct: 4 NGMVWNGMNTNVMQPNRMESNGMEYKEMESKRMETNGMELNGMELNGMGTNGVKLYAVEE 63
Query: 67 NGIEC-----NGMLWNGMECIGMECPLMEWIRVEWN 97
N +EC NG+ WNG+ G EC +M+ ++WN
Sbjct: 64 NRMECKRKERNGLEWNGIHWNGRECSVMDRPGIKWN 99
Score = 61.2 bits (147), Expect = 2e-10
Identities = 40/107 (37%), Positives = 54/107 (50%), Gaps = 22/107 (20%)
Query: 1 MESN-------QWNQIKWNGKELNGVDGIGWDWNEMYWKGLEFHETEWNELERNGLEWNG 53
MESN + +++ NG ELNG++ G N + +E + E ERNGLEWNG
Sbjct: 21 MESNGMEYKEMESKRMETNGMELNGMELNGMGTNGVKLYAVEENRMECKRKERNGLEWNG 80
Query: 54 MSWD----------GIKW-----NDIKWNGIECNGMLWNGMECIGME 85
+ W+ GIKW N IK G+ECN N +EC GM+
Sbjct: 81 IHWNGRECSVMDRPGIKWNATVSNGIKMYGMECNETESNVIECNGMQ 127
Score = 51.2 bits (121), Expect = 2e-07
Identities = 23/56 (41%), Positives = 33/56 (58%)
Query: 5 QWNQIKWNGKELNGVDGIGWDWNEMYWKGLEFHETEWNELERNGLEWNGMSWDGIK 60
+WN I WNG+E + +D G WN G++ + E NE E N +E NGM +GI+
Sbjct: 77 EWNGIHWNGRECSVMDRPGIKWNATVSNGIKMYGMECNETESNVIECNGMQKNGIQ 132
Score = 47.4 bits (111), Expect = 3e-06
Identities = 26/79 (32%), Positives = 45/79 (56%), Gaps = 15/79 (18%)
Query: 7 NQIKWNGKELNGVDGIGWDWNEMYWKGLEFHETEWNELERNGLEW-----NGMSWDGIKW 61
N+++ KE NG++ WN ++W G E + ++R G++W NG+ G++
Sbjct: 64 NRMECKRKERNGLE-----WNGIHWNG-----RECSVMDRPGIKWNATVSNGIKMYGMEC 113
Query: 62 NDIKWNGIECNGMLWNGME 80
N+ + N IECNGM NG++
Sbjct: 114 NETESNVIECNGMQKNGIQ 132
Score = 37.7 bits (86), Expect = 0.002
Identities = 23/79 (29%), Positives = 37/79 (46%), Gaps = 15/79 (18%)
Query: 34 LEFHETEWNELERNGLEWNGMSWDGIKWNDIKWNGIECNGMLWNGMECIG---------- 83
+E + WN + N ++ N M +G+++ +++ +E NGM NGME G
Sbjct: 1 MESNGMVWNGMNTNVMQPNRMESNGMEYKEMESKRMETNGMELNGMELNGMGTNGVKLYA 60
Query: 84 -----MECPLMEWIRVEWN 97
MEC E +EWN
Sbjct: 61 VEENRMECKRKERNGLEWN 79
>gi|239747058 PREDICTED: hypothetical protein XP_002344266 [Homo
sapiens]
Length = 167
Score = 66.2 bits (160), Expect = 5e-12
Identities = 34/96 (35%), Positives = 52/96 (54%), Gaps = 5/96 (5%)
Query: 7 NQIKWNGKELNGVDGIGWDWNEMYWKGLEFHETEWNELERNGLEWNGMSWDGIKWNDIKW 66
N + WNG N + + N M +K +E E N +E NG+E NGM +G+K ++
Sbjct: 4 NGMVWNGMNTNVMQPNRMESNGMEYKEMESKRMETNGMELNGMELNGMGTNGVKLYAVEE 63
Query: 67 NGIEC-----NGMLWNGMECIGMECPLMEWIRVEWN 97
N +EC NG+ WNG+ G EC +M+ ++WN
Sbjct: 64 NRMECKRKERNGLEWNGIHWNGRECSVMDRPGIKWN 99
Score = 63.2 bits (152), Expect = 4e-11
Identities = 50/147 (34%), Positives = 63/147 (42%), Gaps = 50/147 (34%)
Query: 1 MESN-------QWNQIKWNGKELNGVDGIGWDWNEMYWKGLEFHETEWNELERNGLEWNG 53
MESN + +++ NG ELNG++ G N + +E + E ERNGLEWNG
Sbjct: 21 MESNGMEYKEMESKRMETNGMELNGMELNGMGTNGVKLYAVEENRMECKRKERNGLEWNG 80
Query: 54 MSWD----------GIKWNDIKWNG---------------IECNGML--------W---- 76
+ W+ GIKWN NG IECNGM W
Sbjct: 81 IHWNGRECSVMDRPGIKWNATVSNGIKMYGMECNETESNVIECNGMQKMESKIIDWKGWV 140
Query: 77 ------NGMECIGMECPLMEWIRVEWN 97
NGME GME +E R+EWN
Sbjct: 141 SKRNDSNGMESNGMEVNRIELNRMEWN 167
Score = 37.7 bits (86), Expect = 0.002
Identities = 23/79 (29%), Positives = 37/79 (46%), Gaps = 15/79 (18%)
Query: 34 LEFHETEWNELERNGLEWNGMSWDGIKWNDIKWNGIECNGMLWNGMECIG---------- 83
+E + WN + N ++ N M +G+++ +++ +E NGM NGME G
Sbjct: 1 MESNGMVWNGMNTNVMQPNRMESNGMEYKEMESKRMETNGMELNGMELNGMGTNGVKLYA 60
Query: 84 -----MECPLMEWIRVEWN 97
MEC E +EWN
Sbjct: 61 VEENRMECKRKERNGLEWN 79
>gi|239747054 PREDICTED: hypothetical protein XP_002344264 [Homo
sapiens]
Length = 155
Score = 66.2 bits (160), Expect = 5e-12
Identities = 34/96 (35%), Positives = 52/96 (54%), Gaps = 5/96 (5%)
Query: 7 NQIKWNGKELNGVDGIGWDWNEMYWKGLEFHETEWNELERNGLEWNGMSWDGIKWNDIKW 66
N + WNG N + + N M +K +E E N +E NG+E NGM +G+K ++
Sbjct: 4 NGMVWNGMNTNVMQPNRMESNGMEYKEMESKRMETNGMELNGMELNGMGTNGVKLYAVEE 63
Query: 67 NGIEC-----NGMLWNGMECIGMECPLMEWIRVEWN 97
N +EC NG+ WNG+ G EC +M+ ++WN
Sbjct: 64 NRMECKRKERNGLEWNGIHWNGRECSVMDRPGIKWN 99
Score = 63.2 bits (152), Expect = 4e-11
Identities = 46/134 (34%), Positives = 60/134 (44%), Gaps = 38/134 (28%)
Query: 1 MESN-------QWNQIKWNGKELNGVDGIGWDWNEMYWKGLEFHETEWNELERNGLEWNG 53
MESN + +++ NG ELNG++ G N + +E + E ERNGLEWNG
Sbjct: 21 MESNGMEYKEMESKRMETNGMELNGMELNGMGTNGVKLYAVEENRMECKRKERNGLEWNG 80
Query: 54 MSWD----------GIKW-----NDIKWNGIECNGMLWNGMECIG--------------- 83
+ W+ GIKW N IK G+ECN N +EC G
Sbjct: 81 IHWNGRECSVMDRPGIKWNATVSNGIKMYGMECNETESNVIECNGCKKMNPKSLTGKAGC 140
Query: 84 -MECPLMEWIRVEW 96
E MEW R+EW
Sbjct: 141 RKELTPMEWNRMEW 154
Score = 37.7 bits (86), Expect = 0.002
Identities = 23/79 (29%), Positives = 37/79 (46%), Gaps = 15/79 (18%)
Query: 34 LEFHETEWNELERNGLEWNGMSWDGIKWNDIKWNGIECNGMLWNGMECIG---------- 83
+E + WN + N ++ N M +G+++ +++ +E NGM NGME G
Sbjct: 1 MESNGMVWNGMNTNVMQPNRMESNGMEYKEMESKRMETNGMELNGMELNGMGTNGVKLYA 60
Query: 84 -----MECPLMEWIRVEWN 97
MEC E +EWN
Sbjct: 61 VEENRMECKRKERNGLEWN 79
>gi|239747052 PREDICTED: hypothetical protein XP_002344263 [Homo
sapiens]
Length = 134
Score = 66.2 bits (160), Expect = 5e-12
Identities = 34/96 (35%), Positives = 52/96 (54%), Gaps = 5/96 (5%)
Query: 7 NQIKWNGKELNGVDGIGWDWNEMYWKGLEFHETEWNELERNGLEWNGMSWDGIKWNDIKW 66
N + WNG N + + N M +K +E E N +E NG+E NGM +G+K ++
Sbjct: 4 NGMVWNGMNTNVMQPNRMESNGMEYKEMESKRMETNGMELNGMELNGMGTNGVKLYAVEE 63
Query: 67 NGIEC-----NGMLWNGMECIGMECPLMEWIRVEWN 97
N +EC NG+ WNG+ G EC +M+ ++WN
Sbjct: 64 NRMECKRKERNGLEWNGIHWNGRECSVMDRPGIKWN 99
Score = 61.2 bits (147), Expect = 2e-10
Identities = 40/107 (37%), Positives = 54/107 (50%), Gaps = 22/107 (20%)
Query: 1 MESN-------QWNQIKWNGKELNGVDGIGWDWNEMYWKGLEFHETEWNELERNGLEWNG 53
MESN + +++ NG ELNG++ G N + +E + E ERNGLEWNG
Sbjct: 21 MESNGMEYKEMESKRMETNGMELNGMELNGMGTNGVKLYAVEENRMECKRKERNGLEWNG 80
Query: 54 MSWD----------GIKW-----NDIKWNGIECNGMLWNGMECIGME 85
+ W+ GIKW N IK G+ECN N +EC GM+
Sbjct: 81 IHWNGRECSVMDRPGIKWNATVSNGIKMYGMECNETESNVIECNGMQ 127
Score = 51.2 bits (121), Expect = 2e-07
Identities = 23/56 (41%), Positives = 33/56 (58%)
Query: 5 QWNQIKWNGKELNGVDGIGWDWNEMYWKGLEFHETEWNELERNGLEWNGMSWDGIK 60
+WN I WNG+E + +D G WN G++ + E NE E N +E NGM +GI+
Sbjct: 77 EWNGIHWNGRECSVMDRPGIKWNATVSNGIKMYGMECNETESNVIECNGMQKNGIQ 132
Score = 47.4 bits (111), Expect = 3e-06
Identities = 26/79 (32%), Positives = 45/79 (56%), Gaps = 15/79 (18%)
Query: 7 NQIKWNGKELNGVDGIGWDWNEMYWKGLEFHETEWNELERNGLEW-----NGMSWDGIKW 61
N+++ KE NG++ WN ++W G E + ++R G++W NG+ G++
Sbjct: 64 NRMECKRKERNGLE-----WNGIHWNG-----RECSVMDRPGIKWNATVSNGIKMYGMEC 113
Query: 62 NDIKWNGIECNGMLWNGME 80
N+ + N IECNGM NG++
Sbjct: 114 NETESNVIECNGMQKNGIQ 132
Score = 37.7 bits (86), Expect = 0.002
Identities = 23/79 (29%), Positives = 37/79 (46%), Gaps = 15/79 (18%)
Query: 34 LEFHETEWNELERNGLEWNGMSWDGIKWNDIKWNGIECNGMLWNGMECIG---------- 83
+E + WN + N ++ N M +G+++ +++ +E NGM NGME G
Sbjct: 1 MESNGMVWNGMNTNVMQPNRMESNGMEYKEMESKRMETNGMELNGMELNGMGTNGVKLYA 60
Query: 84 -----MECPLMEWIRVEWN 97
MEC E +EWN
Sbjct: 61 VEENRMECKRKERNGLEWN 79
>gi|239747042 PREDICTED: hypothetical protein XP_002344258 [Homo
sapiens]
Length = 134
Score = 66.2 bits (160), Expect = 5e-12
Identities = 34/96 (35%), Positives = 52/96 (54%), Gaps = 5/96 (5%)
Query: 7 NQIKWNGKELNGVDGIGWDWNEMYWKGLEFHETEWNELERNGLEWNGMSWDGIKWNDIKW 66
N + WNG N + + N M +K +E E N +E NG+E NGM +G+K ++
Sbjct: 4 NGMVWNGMNTNVMQPNRMESNGMEYKEMESKRMETNGMELNGMELNGMGTNGVKLYAVEE 63
Query: 67 NGIEC-----NGMLWNGMECIGMECPLMEWIRVEWN 97
N +EC NG+ WNG+ G EC +M+ ++WN
Sbjct: 64 NRMECKRKERNGLEWNGIHWNGRECSVMDRPGIKWN 99
Score = 61.2 bits (147), Expect = 2e-10
Identities = 40/107 (37%), Positives = 54/107 (50%), Gaps = 22/107 (20%)
Query: 1 MESN-------QWNQIKWNGKELNGVDGIGWDWNEMYWKGLEFHETEWNELERNGLEWNG 53
MESN + +++ NG ELNG++ G N + +E + E ERNGLEWNG
Sbjct: 21 MESNGMEYKEMESKRMETNGMELNGMELNGMGTNGVKLYAVEENRMECKRKERNGLEWNG 80
Query: 54 MSWD----------GIKW-----NDIKWNGIECNGMLWNGMECIGME 85
+ W+ GIKW N IK G+ECN N +EC GM+
Sbjct: 81 IHWNGRECSVMDRPGIKWNATVSNGIKMYGMECNETESNVIECNGMQ 127
Score = 51.2 bits (121), Expect = 2e-07
Identities = 23/56 (41%), Positives = 33/56 (58%)
Query: 5 QWNQIKWNGKELNGVDGIGWDWNEMYWKGLEFHETEWNELERNGLEWNGMSWDGIK 60
+WN I WNG+E + +D G WN G++ + E NE E N +E NGM +GI+
Sbjct: 77 EWNGIHWNGRECSVMDRPGIKWNATVSNGIKMYGMECNETESNVIECNGMQKNGIQ 132
Score = 47.4 bits (111), Expect = 3e-06
Identities = 26/79 (32%), Positives = 45/79 (56%), Gaps = 15/79 (18%)
Query: 7 NQIKWNGKELNGVDGIGWDWNEMYWKGLEFHETEWNELERNGLEW-----NGMSWDGIKW 61
N+++ KE NG++ WN ++W G E + ++R G++W NG+ G++
Sbjct: 64 NRMECKRKERNGLE-----WNGIHWNG-----RECSVMDRPGIKWNATVSNGIKMYGMEC 113
Query: 62 NDIKWNGIECNGMLWNGME 80
N+ + N IECNGM NG++
Sbjct: 114 NETESNVIECNGMQKNGIQ 132
Score = 37.7 bits (86), Expect = 0.002
Identities = 23/79 (29%), Positives = 37/79 (46%), Gaps = 15/79 (18%)
Query: 34 LEFHETEWNELERNGLEWNGMSWDGIKWNDIKWNGIECNGMLWNGMECIG---------- 83
+E + WN + N ++ N M +G+++ +++ +E NGM NGME G
Sbjct: 1 MESNGMVWNGMNTNVMQPNRMESNGMEYKEMESKRMETNGMELNGMELNGMGTNGVKLYA 60
Query: 84 -----MECPLMEWIRVEWN 97
MEC E +EWN
Sbjct: 61 VEENRMECKRKERNGLEWN 79
>gi|239755734 PREDICTED: similar to Nanog homeobox isoform 2 [Homo
sapiens]
Length = 289
Score = 36.2 bits (82), Expect = 0.006
Identities = 20/80 (25%), Positives = 32/80 (40%), Gaps = 4/80 (5%)
Query: 1 MESNQWNQIKWNGKELNGVDG---IGWDWNEMYWKGLEFHETEWNELERNGLEWNGMSWD 57
M+S +W + W K NGV + N W ++ + W+ +N W+ SW+
Sbjct: 148 MKSKRWQKNNWP-KNSNGVTQGCLVNPTGNLPMWSNQTWNNSTWSNQTQNIQSWSNHSWN 206
Query: 58 GIKWNDIKWNGIECNGMLWN 77
W WN N +N
Sbjct: 207 TQTWCTQSWNNQAWNSPFYN 226
>gi|239755286 PREDICTED: similar to hCG1742442 [Homo sapiens]
Length = 296
Score = 32.7 bits (73), Expect = 0.064
Identities = 23/57 (40%), Positives = 30/57 (52%), Gaps = 17/57 (29%)
Query: 40 EWNELERNGLEWNGMSWDGIKWNDIKWNGIECNGMLWN--GMECIGMECPLMEWIRV 94
EWN R+ +E N + IKWN +E NG+ WN ME G ++EWIRV
Sbjct: 8 EWN---RHRMESNAII--------IKWNRMESNGVEWNHHQMESSG----IIEWIRV 49
Score = 26.6 bits (57), Expect = 4.6
Identities = 17/46 (36%), Positives = 24/46 (52%), Gaps = 15/46 (32%)
Query: 1 MESN---QWNQ---------IKWNGKELNGVDGIGWDWNEMYWKGL 34
MESN +WN+ IKWN E NGV+ W+ ++M G+
Sbjct: 1 MESNAIIEWNRHRMESNAIIIKWNRMESNGVE---WNHHQMESSGI 43
>gi|153945816 Nanog homeobox [Homo sapiens]
Length = 305
Score = 30.4 bits (67), Expect = 0.32
Identities = 11/47 (23%), Positives = 19/47 (40%)
Query: 31 WKGLEFHETEWNELERNGLEWNGMSWDGIKWNDIKWNGIECNGMLWN 77
W ++ + W+ +N W+ SW+ W WN N +N
Sbjct: 196 WSNQTWNNSTWSNQTQNIQSWSNHSWNTQTWCTQSWNNQAWNSPFYN 242
Score = 27.7 bits (60), Expect = 2.1
Identities = 10/42 (23%), Positives = 15/42 (35%)
Query: 26 WNEMYWKGLEFHETEWNELERNGLEWNGMSWDGIKWNDIKWN 67
W+ W + N + WN +W WN+ WN
Sbjct: 196 WSNQTWNNSTWSNQTQNIQSWSNHSWNTQTWCTQSWNNQAWN 237
Score = 27.7 bits (60), Expect = 2.1
Identities = 11/42 (26%), Positives = 15/42 (35%)
Query: 26 WNEMYWKGLEFHETEWNELERNGLEWNGMSWDGIKWNDIKWN 67
WN W + W+ N W SW+ WN +N
Sbjct: 201 WNNSTWSNQTQNIQSWSNHSWNTQTWCTQSWNNQAWNSPFYN 242
Score = 26.9 bits (58), Expect = 3.5
Identities = 13/43 (30%), Positives = 17/43 (39%), Gaps = 1/43 (2%)
Query: 1 MESNQ-WNQIKWNGKELNGVDGIGWDWNEMYWKGLEFHETEWN 42
M SNQ WN W+ + N WN W ++ WN
Sbjct: 195 MWSNQTWNNSTWSNQTQNIQSWSNHSWNTQTWCTQSWNNQAWN 237
>gi|239755732 PREDICTED: similar to Nanog homeobox isoform 1 [Homo
sapiens]
Length = 305
Score = 30.4 bits (67), Expect = 0.32
Identities = 11/47 (23%), Positives = 19/47 (40%)
Query: 31 WKGLEFHETEWNELERNGLEWNGMSWDGIKWNDIKWNGIECNGMLWN 77
W ++ + W+ +N W+ SW+ W WN N +N
Sbjct: 196 WSNQTWNNSTWSNQTQNIQSWSNHSWNTQTWCTQSWNNQAWNSPFYN 242
Score = 27.7 bits (60), Expect = 2.1
Identities = 10/42 (23%), Positives = 15/42 (35%)
Query: 26 WNEMYWKGLEFHETEWNELERNGLEWNGMSWDGIKWNDIKWN 67
W+ W + N + WN +W WN+ WN
Sbjct: 196 WSNQTWNNSTWSNQTQNIQSWSNHSWNTQTWCTQSWNNQAWN 237
Score = 27.7 bits (60), Expect = 2.1
Identities = 11/42 (26%), Positives = 15/42 (35%)
Query: 26 WNEMYWKGLEFHETEWNELERNGLEWNGMSWDGIKWNDIKWN 67
WN W + W+ N W SW+ WN +N
Sbjct: 201 WNNSTWSNQTQNIQSWSNHSWNTQTWCTQSWNNQAWNSPFYN 242
Score = 26.9 bits (58), Expect = 3.5
Identities = 13/43 (30%), Positives = 17/43 (39%), Gaps = 1/43 (2%)
Query: 1 MESNQ-WNQIKWNGKELNGVDGIGWDWNEMYWKGLEFHETEWN 42
M SNQ WN W+ + N WN W ++ WN
Sbjct: 195 MWSNQTWNNSTWSNQTQNIQSWSNHSWNTQTWCTQSWNNQAWN 237
>gi|239757861 PREDICTED: similar to armadillo repeat containing,
X-linked 4 [Homo sapiens]
Length = 2382
Score = 28.5 bits (62), Expect = 1.2
Identities = 21/80 (26%), Positives = 33/80 (41%), Gaps = 9/80 (11%)
Query: 13 GKELNGVDGIGWDWNEMYWKGLEFHETEWN--ELERNGLEWN-------GMSWDGIKWND 63
G++ +G G +E W G + W E + +G W G W + +D
Sbjct: 1276 GEQASGGLWAGGQTSEGTWAGDKASGGAWTGAENQASGGSWALAGNQAIGELWAAGQASD 1335
Query: 64 IKWNGIECNGMLWNGMECIG 83
W G + +G+ W G E IG
Sbjct: 1336 GSWPGGQASGVSWVGEEAIG 1355
>gi|4557493 cleavage stimulation factor subunit 2 [Homo sapiens]
Length = 577
Score = 28.1 bits (61), Expect = 1.6
Identities = 15/62 (24%), Positives = 28/62 (45%)
Query: 13 GKELNGVDGIGWDWNEMYWKGLEFHETEWNELERNGLEWNGMSWDGIKWNDIKWNGIECN 72
G++ G+D G + M +GL+ E +E +E M ++ ++ G+E
Sbjct: 404 GRDPRGIDARGMEARAMEARGLDARGLEARAMEARAMEARAMEARAMEARAMEVRGMEAR 463
Query: 73 GM 74
GM
Sbjct: 464 GM 465
>gi|110611228 utrophin [Homo sapiens]
Length = 3433
Score = 28.1 bits (61), Expect = 1.6
Identities = 12/51 (23%), Positives = 26/51 (50%), Gaps = 6/51 (11%)
Query: 42 NELERNGLEWNGMSWDGIKWNDIKWNGIECNGMLWNGMECIGMECPLMEWI 92
++L++ G W + +W + +WN ++ +LW E + +C L W+
Sbjct: 501 DQLQKLGERWTAVC----RWTEERWNRLQEINILW--QELLEEQCLLKAWL 545
>gi|29294615 sweet taste receptor T1r isoform b [Homo sapiens]
Length = 841
Score = 27.7 bits (60), Expect = 2.1
Identities = 12/46 (26%), Positives = 21/46 (45%), Gaps = 4/46 (8%)
Query: 12 NGKELNGVDGIGWDWNEMYWKGLEFHETEWNELERN----GLEWNG 53
N L+ + I WDWN W + W+ ++ N ++W+G
Sbjct: 442 NRDPLSSYNIIAWDWNGPKWTFTVLGSSTWSPVQLNINETKIQWHG 487
>gi|29294621 sweet taste receptor T1r isoform d [Homo sapiens]
Length = 324
Score = 27.7 bits (60), Expect = 2.1
Identities = 12/46 (26%), Positives = 21/46 (45%), Gaps = 4/46 (8%)
Query: 12 NGKELNGVDGIGWDWNEMYWKGLEFHETEWNELERN----GLEWNG 53
N L+ + I WDWN W + W+ ++ N ++W+G
Sbjct: 188 NRDPLSSYNIIAWDWNGPKWTFTVLGSSTWSPVQLNINETKIQWHG 233
>gi|29294619 sweet taste receptor T1r isoform c [Homo sapiens]
Length = 587
Score = 27.7 bits (60), Expect = 2.1
Identities = 12/46 (26%), Positives = 21/46 (45%), Gaps = 4/46 (8%)
Query: 12 NGKELNGVDGIGWDWNEMYWKGLEFHETEWNELERN----GLEWNG 53
N L+ + I WDWN W + W+ ++ N ++W+G
Sbjct: 188 NRDPLSSYNIIAWDWNGPKWTFTVLGSSTWSPVQLNINETKIQWHG 233
>gi|156523264 hypothetical protein LOC112752 isoform 2 [Homo
sapiens]
Length = 208
Score = 27.7 bits (60), Expect = 2.1
Identities = 9/26 (34%), Positives = 16/26 (61%)
Query: 20 DGIGWDWNEMYWKGLEFHETEWNELE 45
D +GWDW+ ++ + TEW+ L+
Sbjct: 170 DDVGWDWDHLFTEVSSEVLTEWDPLQ 195
>gi|156523262 hypothetical protein LOC112752 isoform 1 [Homo
sapiens]
Length = 213
Score = 27.7 bits (60), Expect = 2.1
Identities = 9/26 (34%), Positives = 16/26 (61%)
Query: 20 DGIGWDWNEMYWKGLEFHETEWNELE 45
D +GWDW+ ++ + TEW+ L+
Sbjct: 175 DDVGWDWDHLFTEVSSEVLTEWDPLQ 200
Database: hs.faa
Posted date: Aug 4, 2009 4:42 PM
Number of letters in database: 18,247,518
Number of sequences in database: 37,866
Lambda K H
0.317 0.139 0.536
Gapped
Lambda K H
0.267 0.0410 0.140
Matrix: BLOSUM62
Gap Penalties: Existence: 11, Extension: 1
Number of Hits to DB: 4,569,916
Number of Sequences: 37866
Number of extensions: 186311
Number of successful extensions: 881
Number of sequences better than 10.0: 30
Number of HSP's better than 10.0 without gapping: 29
Number of HSP's successfully gapped in prelim test: 5
Number of HSP's that attempted gapping in prelim test: 312
Number of HSP's gapped (non-prelim): 117
length of query: 97
length of database: 18,247,518
effective HSP length: 68
effective length of query: 29
effective length of database: 15,672,630
effective search space: 454506270
effective search space used: 454506270
T: 11
A: 40
X1: 16 ( 7.3 bits)
X2: 38 (14.6 bits)
X3: 64 (24.7 bits)
S1: 41 (21.6 bits)
S2: 55 (25.8 bits)
Search results were obtained with NCBI BLAST and RefSeq entries.
Home |
Table of Contents |
Search text |
Search genes |
Search sequences |
Purchase |
FAQ |
Blog |
Help
Guide to the Human Genome
Copyright © 2010 by Stewart Scherer. All rights reserved.