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Search of human proteins with 116812620
BLASTP 2.2.11 [Jun-05-2005]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= gi|116812620 hypothetical protein LOC147965 [Homo sapiens]
(349 letters)
Database: hs.faa
37,866 sequences; 18,247,518 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
gi|116812620 hypothetical protein LOC147965 [Homo sapiens] 701 0.0
gi|56699482 hypothetical protein LOC25940 [Homo sapiens] 221 1e-57
gi|109452587 family with sequence similarity 98, member B isofor... 191 8e-49
gi|109452589 family with sequence similarity 98, member B isofor... 143 3e-34
gi|190194416 F-box and leucine-rich repeat protein 15 [Homo sapi... 34 0.17
gi|54112113 ectodysplasin A isoform EDA-O [Homo sapiens] 33 0.29
gi|54112107 ectodysplasin A isoform EDA-D [Homo sapiens] 33 0.29
gi|54112105 ectodysplasin A isoform EDA-C [Homo sapiens] 33 0.29
gi|54112103 ectodysplasin A isoform EDA-B [Homo sapiens] 33 0.29
gi|54112101 ectodysplasin A isoform EDA-A2 [Homo sapiens] 33 0.29
gi|4503449 ectodysplasin A isoform EDA-A1 [Homo sapiens] 33 0.29
gi|48255900 SWI/SNF-related matrix-associated actin-dependent re... 33 0.38
gi|48255898 SWI/SNF-related matrix-associated actin-dependent re... 33 0.38
gi|32484977 angiomotin like 2 [Homo sapiens] 33 0.50
gi|14719400 ADP-ribosylation factor binding protein 3 isoform sh... 32 0.65
gi|85815829 SH3-domain binding protein 1 [Homo sapiens] 32 0.65
gi|20336267 ADP-ribosylation factor binding protein 3 isoform lo... 32 0.65
gi|53829376 plakophilin 4 isoform b [Homo sapiens] 32 0.85
gi|53829374 plakophilin 4 isoform a [Homo sapiens] 32 0.85
gi|169163710 PREDICTED: 5'-nucleotidase domain containing 4 [Hom... 32 0.85
gi|169163021 PREDICTED: 5'-nucleotidase domain containing 4 [Hom... 32 0.85
gi|239753928 PREDICTED: hypothetical protein [Homo sapiens] 32 1.1
gi|239748470 PREDICTED: hypothetical protein [Homo sapiens] 32 1.1
gi|239742434 PREDICTED: hypothetical protein XP_002342514 [Homo ... 32 1.1
gi|239755499 PREDICTED: hypothetical protein [Homo sapiens] 31 1.4
gi|239750031 PREDICTED: hypothetical protein [Homo sapiens] 31 1.4
gi|239744342 PREDICTED: hypothetical protein XP_002343123 [Homo ... 31 1.4
gi|15277342 estradiol 17 beta-dehydrogenase 8 [Homo sapiens] 31 1.4
gi|148528975 LON peptidase N-terminal domain and ring finger 2 [... 31 1.4
gi|164519026 galactosidase, beta 1 like 3 [Homo sapiens] 31 1.4
>gi|116812620 hypothetical protein LOC147965 [Homo sapiens]
Length = 349
Score = 701 bits (1809), Expect = 0.0
Identities = 349/349 (100%), Positives = 349/349 (100%)
Query: 1 MEAVKAEAWEGAAVAQDLLALGYGGVPGAASRGASCPDFRGLCVRLAAELATLGALEQQR 60
MEAVKAEAWEGAAVAQDLLALGYGGVPGAASRGASCPDFRGLCVRLAAELATLGALEQQR
Sbjct: 1 MEAVKAEAWEGAAVAQDLLALGYGGVPGAASRGASCPDFRGLCVRLAAELATLGALEQQR 60
Query: 61 EAGAEVLSAGDGPGAEEDFLRQLGSLLRELHCPDRALCGGDGAAALREPGAGLRLLRFLC 120
EAGAEVLSAGDGPGAEEDFLRQLGSLLRELHCPDRALCGGDGAAALREPGAGLRLLRFLC
Sbjct: 61 EAGAEVLSAGDGPGAEEDFLRQLGSLLRELHCPDRALCGGDGAAALREPGAGLRLLRFLC 120
Query: 121 SELQATRLLCLRSLLDPSPRPPLGEGVVEGAGMVQELDLTLQALGLPRPAPGTPASQLLQ 180
SELQATRLLCLRSLLDPSPRPPLGEGVVEGAGMVQELDLTLQALGLPRPAPGTPASQLLQ
Sbjct: 121 SELQATRLLCLRSLLDPSPRPPLGEGVVEGAGMVQELDLTLQALGLPRPAPGTPASQLLQ 180
Query: 181 ELHAKISELQPSLPPGSLQPLLSCSLDAPRWEALESLSQSLRDQYRCRRCLLLKRLDLTT 240
ELHAKISELQPSLPPGSLQPLLSCSLDAPRWEALESLSQSLRDQYRCRRCLLLKRLDLTT
Sbjct: 181 ELHAKISELQPSLPPGSLQPLLSCSLDAPRWEALESLSQSLRDQYRCRRCLLLKRLDLTT 240
Query: 241 SAFHWSDRAEAQGEAMRAVLIPIREVLTPESDISIAHVLAARADLSCLVPATSVAVRRGT 300
SAFHWSDRAEAQGEAMRAVLIPIREVLTPESDISIAHVLAARADLSCLVPATSVAVRRGT
Sbjct: 241 SAFHWSDRAEAQGEAMRAVLIPIREVLTPESDISIAHVLAARADLSCLVPATSVAVRRGT 300
Query: 301 CCAINKVLMGNVPDRGGRPNELEPPMPTWRSRREDGGPQCWGRKKKKKK 349
CCAINKVLMGNVPDRGGRPNELEPPMPTWRSRREDGGPQCWGRKKKKKK
Sbjct: 301 CCAINKVLMGNVPDRGGRPNELEPPMPTWRSRREDGGPQCWGRKKKKKK 349
>gi|56699482 hypothetical protein LOC25940 [Homo sapiens]
Length = 518
Score = 221 bits (562), Expect = 1e-57
Identities = 133/341 (39%), Positives = 190/341 (55%), Gaps = 25/341 (7%)
Query: 14 VAQDLLALGY-------GGVPGAASRGASCPDFRGLCVRLAAELATLGALEQQREAGAEV 66
+ + L LGY G + A S GAS P+F LC L +EL L LE+
Sbjct: 10 ILESLEDLGYKGPLLEDGALSQAVSAGASSPEFTKLCAWLVSELRVLCKLEEN------- 62
Query: 67 LSAGDGPGAEEDFLRQLGSLLRELHCPDRALCGGDGAAALREPGAGLRLLRFLCSELQAT 126
+ A + P E+F ++ LL E++CP +L GD L L LL +L SEL+A
Sbjct: 63 VQATNSPSEAEEFQLEVSGLLGEMNCPYLSLTSGDVTKRLLIQKNCLLLLTYLISELEAA 122
Query: 127 RLLCLRSLLDPSPRPPLGEGVVEGAGMVQELDLTLQALGLPRPAPGTPASQLLQELHAKI 186
R+LC+ + PP G+ + QEL ALG+ +P Q + K+
Sbjct: 123 RMLCVNA-------PPKKAQEGGGSEVFQELKGICIALGMSKPPANITMFQFFSGIEKKL 175
Query: 187 SELQPSLPPGSL-QPLLSCSLDAPRWEALESLSQSLRDQYRCRRCLLLKRLDLTTSAFHW 245
E +PP + +PLL + WE +E+++Q++ ++Y RR LL+KRLD+T +F W
Sbjct: 176 KETLAKVPPNHVGKPLLKKPMGPAHWEKIEAINQAIANEYEVRRKLLIKRLDVTVQSFGW 235
Query: 246 SDRAEAQGEAMRAVLIPIREVLTPESDISIAHVLAARADLSCLVPATSVAVRRGTCCAIN 305
SDRA++Q E + V P R VL+P++ IS+AH+LAAR DLS ++ +S ++R T CAIN
Sbjct: 236 SDRAKSQTEKLAKVYQPKRSVLSPKTTISVAHLLAARQDLSKILRTSSGSIREKTACAIN 295
Query: 306 KVLMGNVPDRGGRPNELEPP---MPTWRSRREDGGPQCWGR 343
KVLMG VPDRGGRPNE+EPP MP W+ R++ Q GR
Sbjct: 296 KVLMGRVPDRGGRPNEIEPPPPEMPPWQKRQDGPQQQTGGR 336
>gi|109452587 family with sequence similarity 98, member B isoform 1
[Homo sapiens]
Length = 433
Score = 191 bits (485), Expect = 8e-49
Identities = 121/341 (35%), Positives = 189/341 (55%), Gaps = 29/341 (8%)
Query: 14 VAQDLLALGYGG-------VPGAASRGASCPDFRGLCVRLAAELATLGALEQQREAGAEV 66
V L ALGY G + AA G S P+F LC+ L +++ +L LE+ +
Sbjct: 16 VLDTLEALGYKGPLLEEQALTKAAEGGLSSPEFSELCIWLGSQIKSLCNLEES------I 69
Query: 67 LSAGDGPGAEEDFLRQLGSLLRELHCPDRALCGGDGAAALREPGAGLRLLRFLCSELQAT 126
SAG E F ++ L+E+ CP L GD L++ L+LL FL +ELQA+
Sbjct: 70 TSAGRDD--LESFQLEISGFLKEMACPYSVLISGDIKDRLKKKEDCLKLLLFLSTELQAS 127
Query: 127 RLLCLRSLLDPSPRPPLGEGVVEGAGMVQELDLTLQALGLPRPAPGTPASQLLQELHAKI 186
++L + + + + + QE+ LG+P+ + +L ++ +K+
Sbjct: 128 QIL--------QNKKHKNSQLDKNSEVYQEVQAMFDTLGIPKSTT-SDIPHMLNQVESKV 178
Query: 187 SELQPSLPPGSL-QPLLSCSLDAPRWEALESLSQSLRDQYRCRRCLLLKRLDLTTSAFHW 245
++ + + +PLL L++ + E LE ++ +L +Y CRR +L+KRLD+T +F W
Sbjct: 179 KDILSKVQKNHVGKPLLKMDLNSEQAEQLERINDALSCEYECRRRMLMKRLDVTVQSFGW 238
Query: 246 SDRAEAQGEAMRAVLIPIREVLTPESDISIAHVLAARADLSCLVPATSVAVRRGTCCAIN 305
SDRA+ + + + + P R L+P++ I++AH+LAAR DLS ++ +S R T CAIN
Sbjct: 239 SDRAKVKTDDIARIYQPKRYALSPKTTITMAHLLAAREDLSKIIRTSSGTSREKTACAIN 298
Query: 306 KVLMGNVPDRGGRPNELEPP---MPTWRSRREDGGPQ-CWG 342
KVLMG VPDRGGRPNE+EPP MP W+ R+E GG + WG
Sbjct: 299 KVLMGRVPDRGGRPNEIEPPPPEMPPWQKRQEGGGGRGGWG 339
>gi|109452589 family with sequence similarity 98, member B isoform 2
[Homo sapiens]
Length = 330
Score = 143 bits (360), Expect = 3e-34
Identities = 96/302 (31%), Positives = 160/302 (52%), Gaps = 25/302 (8%)
Query: 14 VAQDLLALGYGG-------VPGAASRGASCPDFRGLCVRLAAELATLGALEQQREAGAEV 66
V L ALGY G + AA G S P+F LC+ L +++ +L LE+ +
Sbjct: 16 VLDTLEALGYKGPLLEEQALTKAAEGGLSSPEFSELCIWLGSQIKSLCNLEES------I 69
Query: 67 LSAGDGPGAEEDFLRQLGSLLRELHCPDRALCGGDGAAALREPGAGLRLLRFLCSELQAT 126
SAG E F ++ L+E+ CP L GD L++ L+LL FL +ELQA+
Sbjct: 70 TSAGRDD--LESFQLEISGFLKEMACPYSVLISGDIKDRLKKKEDCLKLLLFLSTELQAS 127
Query: 127 RLLCLRSLLDPSPRPPLGEGVVEGAGMVQELDLTLQALGLPRPAPGTPASQLLQELHAKI 186
++L + + + + + QE+ LG+P+ + +L ++ +K+
Sbjct: 128 QIL--------QNKKHKNSQLDKNSEVYQEVQAMFDTLGIPKSTT-SDIPHMLNQVESKV 178
Query: 187 SELQPSLPPGSL-QPLLSCSLDAPRWEALESLSQSLRDQYRCRRCLLLKRLDLTTSAFHW 245
++ + + +PLL L++ + E LE ++ +L +Y CRR +L+KRLD+T +F W
Sbjct: 179 KDILSKVQKNHVGKPLLKMDLNSEQAEQLERINDALSCEYECRRRMLMKRLDVTVQSFGW 238
Query: 246 SDRAEAQGEAMRAVLIPIREVLTPESDISIAHVLAARADLSCLVPATSVAVRRGTCCAIN 305
SDRA+ + + + + P R L+P++ I++AH+LAAR DLS ++ +S R T CAIN
Sbjct: 239 SDRAKVKTDDIARIYQPKRYALSPKTTITMAHLLAAREDLSKIIRTSSGTSREKTACAIN 298
Query: 306 KV 307
KV
Sbjct: 299 KV 300
>gi|190194416 F-box and leucine-rich repeat protein 15 [Homo
sapiens]
Length = 300
Score = 34.3 bits (77), Expect = 0.17
Identities = 44/148 (29%), Positives = 58/148 (39%), Gaps = 9/148 (6%)
Query: 10 EGAAVAQDLLALGYGGVPGAASRGAS--CPDFRGLCVRLAAELA--TLGALEQQREAGAE 65
EG Q L V G A RG + CP L + +L + L Q+R AG
Sbjct: 137 EGCPRLQRLSLAHCDWVDGLALRGLADRCPALEELDLTACRQLKDEAIVYLAQRRGAGLR 196
Query: 66 VLSAGDGPGAEEDFLRQLGSLLRELHCPDRALC---GGDGAAALREPGAGLRLLRFL-CS 121
LS + +++L ELH D C G DG L E LR LR C
Sbjct: 197 SLSLAVNANVGDAAVQELARNCPELHHLDLTGCLRVGSDGVRTLAEYCPVLRSLRVRHCH 256
Query: 122 ELQATRLLCLRSL-LDPSPRPPLGEGVV 148
+ + L LR +D PPL + +V
Sbjct: 257 HVAESSLSRLRKRGVDIDVEPPLHQALV 284
>gi|54112113 ectodysplasin A isoform EDA-O [Homo sapiens]
Length = 135
Score = 33.5 bits (75), Expect = 0.29
Identities = 27/71 (38%), Positives = 29/71 (40%), Gaps = 6/71 (8%)
Query: 22 GYGGVPGAASRGASCPDFRGLC-VRLAAELATLGAL-----EQQREAGAEVLSAGDGPGA 75
G GG P A G SC F G + LA L TL E +RE GAE G G
Sbjct: 26 GCGGAPARAGEGNSCLLFLGFFGLSLALHLLTLCCYLELRSELRRERGAESRLGGSGTPG 85
Query: 76 EEDFLRQLGSL 86
L LG L
Sbjct: 86 TSGTLSSLGGL 96
>gi|54112107 ectodysplasin A isoform EDA-D [Homo sapiens]
Length = 142
Score = 33.5 bits (75), Expect = 0.29
Identities = 27/71 (38%), Positives = 29/71 (40%), Gaps = 6/71 (8%)
Query: 22 GYGGVPGAASRGASCPDFRGLC-VRLAAELATLGAL-----EQQREAGAEVLSAGDGPGA 75
G GG P A G SC F G + LA L TL E +RE GAE G G
Sbjct: 26 GCGGAPARAGEGNSCLLFLGFFGLSLALHLLTLCCYLELRSELRRERGAESRLGGSGTPG 85
Query: 76 EEDFLRQLGSL 86
L LG L
Sbjct: 86 TSGTLSSLGGL 96
>gi|54112105 ectodysplasin A isoform EDA-C [Homo sapiens]
Length = 147
Score = 33.5 bits (75), Expect = 0.29
Identities = 27/71 (38%), Positives = 29/71 (40%), Gaps = 6/71 (8%)
Query: 22 GYGGVPGAASRGASCPDFRGLC-VRLAAELATLGAL-----EQQREAGAEVLSAGDGPGA 75
G GG P A G SC F G + LA L TL E +RE GAE G G
Sbjct: 26 GCGGAPARAGEGNSCLLFLGFFGLSLALHLLTLCCYLELRSELRRERGAESRLGGSGTPG 85
Query: 76 EEDFLRQLGSL 86
L LG L
Sbjct: 86 TSGTLSSLGGL 96
>gi|54112103 ectodysplasin A isoform EDA-B [Homo sapiens]
Length = 178
Score = 33.5 bits (75), Expect = 0.29
Identities = 27/71 (38%), Positives = 29/71 (40%), Gaps = 6/71 (8%)
Query: 22 GYGGVPGAASRGASCPDFRGLC-VRLAAELATLGAL-----EQQREAGAEVLSAGDGPGA 75
G GG P A G SC F G + LA L TL E +RE GAE G G
Sbjct: 26 GCGGAPARAGEGNSCLLFLGFFGLSLALHLLTLCCYLELRSELRRERGAESRLGGSGTPG 85
Query: 76 EEDFLRQLGSL 86
L LG L
Sbjct: 86 TSGTLSSLGGL 96
>gi|54112101 ectodysplasin A isoform EDA-A2 [Homo sapiens]
Length = 389
Score = 33.5 bits (75), Expect = 0.29
Identities = 27/71 (38%), Positives = 29/71 (40%), Gaps = 6/71 (8%)
Query: 22 GYGGVPGAASRGASCPDFRGLC-VRLAAELATLGAL-----EQQREAGAEVLSAGDGPGA 75
G GG P A G SC F G + LA L TL E +RE GAE G G
Sbjct: 26 GCGGAPARAGEGNSCLLFLGFFGLSLALHLLTLCCYLELRSELRRERGAESRLGGSGTPG 85
Query: 76 EEDFLRQLGSL 86
L LG L
Sbjct: 86 TSGTLSSLGGL 96
>gi|4503449 ectodysplasin A isoform EDA-A1 [Homo sapiens]
Length = 391
Score = 33.5 bits (75), Expect = 0.29
Identities = 27/71 (38%), Positives = 29/71 (40%), Gaps = 6/71 (8%)
Query: 22 GYGGVPGAASRGASCPDFRGLC-VRLAAELATLGAL-----EQQREAGAEVLSAGDGPGA 75
G GG P A G SC F G + LA L TL E +RE GAE G G
Sbjct: 26 GCGGAPARAGEGNSCLLFLGFFGLSLALHLLTLCCYLELRSELRRERGAESRLGGSGTPG 85
Query: 76 EEDFLRQLGSL 86
L LG L
Sbjct: 86 TSGTLSSLGGL 96
>gi|48255900 SWI/SNF-related matrix-associated actin-dependent
regulator of chromatin a2 isoform a [Homo sapiens]
Length = 1590
Score = 33.1 bits (74), Expect = 0.38
Identities = 33/111 (29%), Positives = 45/111 (40%), Gaps = 21/111 (18%)
Query: 137 PSPRPPLGEGVVEGAGMVQELDLTLQALGLPRPAPGTPASQLLQELHAKISELQPSLPPG 196
PSP PP Q + +P+PAPG P+ L +L K S + P P
Sbjct: 287 PSPAPPAA---------AQPPAAAVPGPSVPQPAPGQPSPVL--QLQQKQSRISPIQKPQ 335
Query: 197 SLQPL---------LSCSLDAPRWEALESLSQSLRDQYRCRRCLLLKRLDL 238
L P+ L + A R + LE+L SL R + + LK L L
Sbjct: 336 GLDPVEILQEREYRLQARI-AHRIQELENLPGSLPPDLRTKATVELKALRL 385
>gi|48255898 SWI/SNF-related matrix-associated actin-dependent
regulator of chromatin a2 isoform b [Homo sapiens]
Length = 1572
Score = 33.1 bits (74), Expect = 0.38
Identities = 33/111 (29%), Positives = 45/111 (40%), Gaps = 21/111 (18%)
Query: 137 PSPRPPLGEGVVEGAGMVQELDLTLQALGLPRPAPGTPASQLLQELHAKISELQPSLPPG 196
PSP PP Q + +P+PAPG P+ L +L K S + P P
Sbjct: 287 PSPAPPAA---------AQPPAAAVPGPSVPQPAPGQPSPVL--QLQQKQSRISPIQKPQ 335
Query: 197 SLQPL---------LSCSLDAPRWEALESLSQSLRDQYRCRRCLLLKRLDL 238
L P+ L + A R + LE+L SL R + + LK L L
Sbjct: 336 GLDPVEILQEREYRLQARI-AHRIQELENLPGSLPPDLRTKATVELKALRL 385
>gi|32484977 angiomotin like 2 [Homo sapiens]
Length = 780
Score = 32.7 bits (73), Expect = 0.50
Identities = 39/128 (30%), Positives = 52/128 (40%), Gaps = 10/128 (7%)
Query: 42 LCVRLAAELATLGALEQQREAGAEVLSAGDGPGAEEDFLRQLGSLLRELHCPDRALCGGD 101
L RL EL L A QQR+AGA S+G G E LR L LRE ++ L
Sbjct: 510 LRTRLEQELKALRA--QQRQAGAPGGSSGSGGSPELSALR-LSEQLREKE--EQILALEA 564
Query: 102 GAAALREPGAGLRLLRFLCSELQATRLL-----CLRSLLDPSPRPPLGEGVVEGAGMVQE 156
+ R +R + AT +R PSP EG++ G QE
Sbjct: 565 DMTKWEQKYLEERAMRQFAMDAAATAAAQRDTTLIRHSPQPSPSSSFNEGLLTGGHRHQE 624
Query: 157 LDLTLQAL 164
++ L+ L
Sbjct: 625 MESRLKVL 632
>gi|14719400 ADP-ribosylation factor binding protein 3 isoform short
[Homo sapiens]
Length = 690
Score = 32.3 bits (72), Expect = 0.65
Identities = 30/87 (34%), Positives = 35/87 (40%), Gaps = 8/87 (9%)
Query: 128 LLCLRSLLDPSPRPPLGEGVVEGAGMVQELDLTLQALGLPRPAPGTPA-----SQLLQEL 182
LLCL L DP+P P E G L L P PGT A + LLQ
Sbjct: 361 LLCL-GLADPAPNVPPKESA--GNSQWHLLQREQSDLDFFSPRPGTAACGASDAPLLQPS 417
Query: 183 HAKISELQPSLPPGSLQPLLSCSLDAP 209
S Q LPP P++ S+ AP
Sbjct: 418 APSSSSSQAPLPPPFPAPVVPASVPAP 444
>gi|85815829 SH3-domain binding protein 1 [Homo sapiens]
Length = 701
Score = 32.3 bits (72), Expect = 0.65
Identities = 23/62 (37%), Positives = 33/62 (53%), Gaps = 4/62 (6%)
Query: 74 GAEEDFLRQLGSLLRELHCPDRALCGGDGAAALREPGAGLRLLRFLCSELQATRLLCLRS 133
GA + +LR+L L D + AA+L+EPGA L+ L+ +CS L L LR
Sbjct: 346 GALKSYLRELPEPLMTFDLYDDWM----RAASLKEPGARLQALQEVCSRLPPENLSNLRY 401
Query: 134 LL 135
L+
Sbjct: 402 LM 403
>gi|20336267 ADP-ribosylation factor binding protein 3 isoform long
[Homo sapiens]
Length = 723
Score = 32.3 bits (72), Expect = 0.65
Identities = 30/87 (34%), Positives = 35/87 (40%), Gaps = 8/87 (9%)
Query: 128 LLCLRSLLDPSPRPPLGEGVVEGAGMVQELDLTLQALGLPRPAPGTPA-----SQLLQEL 182
LLCL L DP+P P E G L L P PGT A + LLQ
Sbjct: 394 LLCL-GLADPAPNVPPKESA--GNSQWHLLQREQSDLDFFSPRPGTAACGASDAPLLQPS 450
Query: 183 HAKISELQPSLPPGSLQPLLSCSLDAP 209
S Q LPP P++ S+ AP
Sbjct: 451 APSSSSSQAPLPPPFPAPVVPASVPAP 477
>gi|53829376 plakophilin 4 isoform b [Homo sapiens]
Length = 1149
Score = 32.0 bits (71), Expect = 0.85
Identities = 12/19 (63%), Positives = 14/19 (73%)
Query: 331 SRREDGGPQCWGRKKKKKK 349
S +D P CWG+KKKKKK
Sbjct: 776 SPSKDSEPSCWGKKKKKKK 794
>gi|53829374 plakophilin 4 isoform a [Homo sapiens]
Length = 1192
Score = 32.0 bits (71), Expect = 0.85
Identities = 12/19 (63%), Positives = 14/19 (73%)
Query: 331 SRREDGGPQCWGRKKKKKK 349
S +D P CWG+KKKKKK
Sbjct: 776 SPSKDSEPSCWGKKKKKKK 794
>gi|169163710 PREDICTED: 5'-nucleotidase domain containing 4 [Homo
sapiens]
Length = 718
Score = 32.0 bits (71), Expect = 0.85
Identities = 38/123 (30%), Positives = 50/123 (40%), Gaps = 5/123 (4%)
Query: 83 LGSLLRELHCPDRALCGGDGAAALREPGAGLRLLRFLCSELQATRLLCLRSLLDPSPRPP 142
L +R L C R G AA PGA LR L ++ LL L + S R
Sbjct: 43 LSVTMRSLSCRPRISAQGLACAAQNPPGAALRGNSQLLTDRHCFCLLSLALVRVCSVRCG 102
Query: 143 LGEGVVEGAGMVQELDLTLQALGLPRPAPGTPASQLLQELH-AKISELQPSLPPGSLQPL 201
+ GVV M + L L LP A G AS L ++ + ++L P P S +
Sbjct: 103 VLCGVV---CMSEYLASVLSCKSLP-SAAGLEASSTLPDMFLQERTQLSPETPVPSTSAI 158
Query: 202 LSC 204
L C
Sbjct: 159 LRC 161
>gi|169163021 PREDICTED: 5'-nucleotidase domain containing 4 [Homo
sapiens]
Length = 718
Score = 32.0 bits (71), Expect = 0.85
Identities = 38/123 (30%), Positives = 50/123 (40%), Gaps = 5/123 (4%)
Query: 83 LGSLLRELHCPDRALCGGDGAAALREPGAGLRLLRFLCSELQATRLLCLRSLLDPSPRPP 142
L +R L C R G AA PGA LR L ++ LL L + S R
Sbjct: 43 LSVTMRSLSCRPRISAQGLACAAQNPPGAALRGNSQLLTDRHCFCLLSLALVRVCSVRCG 102
Query: 143 LGEGVVEGAGMVQELDLTLQALGLPRPAPGTPASQLLQELH-AKISELQPSLPPGSLQPL 201
+ GVV M + L L LP A G AS L ++ + ++L P P S +
Sbjct: 103 VLCGVV---CMSEYLASVLSCKSLP-SAAGLEASSTLPDMFLQERTQLSPETPVPSTSAI 158
Query: 202 LSC 204
L C
Sbjct: 159 LRC 161
>gi|239753928 PREDICTED: hypothetical protein [Homo sapiens]
Length = 1179
Score = 31.6 bits (70), Expect = 1.1
Identities = 53/156 (33%), Positives = 60/156 (38%), Gaps = 50/156 (32%)
Query: 5 KAEAWEGAAVAQDLLALGY--GGVPGAASRGASCPDFRGLCVRLAAEL-ATLGALEQ--- 58
KAEAW A L GY G+PGAA G V L L A GAL++
Sbjct: 566 KAEAWFSGWAAASWLQAGYRGPGLPGAAP---------GQAVELIGLLRAAGGALQEGQQ 616
Query: 59 -------QREAGA-----EVLSAG--DGPGAEEDFLRQLGSLLRELH---------CPDR 95
Q EAGA V AG DGPG +E L ++LH CP
Sbjct: 617 LPVSRGTQGEAGAAGVRGPVGGAGGADGPGVQEREQALCTLLGQQLHIILTAAPAKCPQL 676
Query: 96 ALCGGDGAAALREPGAGLRLLRFLCSELQATRLLCL 131
C PGA L LL L LQ +LL L
Sbjct: 677 PSC----------PGALLLLL--LLQPLQLPQLLRL 700
>gi|239748470 PREDICTED: hypothetical protein [Homo sapiens]
Length = 889
Score = 31.6 bits (70), Expect = 1.1
Identities = 53/156 (33%), Positives = 60/156 (38%), Gaps = 50/156 (32%)
Query: 5 KAEAWEGAAVAQDLLALGY--GGVPGAASRGASCPDFRGLCVRLAAEL-ATLGALEQ--- 58
KAEAW A L GY G+PGAA G V L L A GAL++
Sbjct: 566 KAEAWFSGWAAASWLQAGYRGPGLPGAAP---------GQAVELIGLLRAAGGALQEGQQ 616
Query: 59 -------QREAGA-----EVLSAG--DGPGAEEDFLRQLGSLLRELH---------CPDR 95
Q EAGA V AG DGPG +E L ++LH CP
Sbjct: 617 LPVSRGTQGEAGAAGVRGPVGGAGGADGPGVQEREQALCTLLGQQLHIILTAAPAKCPQL 676
Query: 96 ALCGGDGAAALREPGAGLRLLRFLCSELQATRLLCL 131
C PGA L LL L LQ +LL L
Sbjct: 677 PSC----------PGALLLLL--LLQPLQLPQLLRL 700
>gi|239742434 PREDICTED: hypothetical protein XP_002342514 [Homo
sapiens]
Length = 889
Score = 31.6 bits (70), Expect = 1.1
Identities = 53/156 (33%), Positives = 60/156 (38%), Gaps = 50/156 (32%)
Query: 5 KAEAWEGAAVAQDLLALGY--GGVPGAASRGASCPDFRGLCVRLAAEL-ATLGALEQ--- 58
KAEAW A L GY G+PGAA G V L L A GAL++
Sbjct: 566 KAEAWFSGWAAASWLQAGYRGPGLPGAAP---------GQAVELIGLLRAAGGALQEGQQ 616
Query: 59 -------QREAGA-----EVLSAG--DGPGAEEDFLRQLGSLLRELH---------CPDR 95
Q EAGA V AG DGPG +E L ++LH CP
Sbjct: 617 LPVSRGTQGEAGAAGVRGPVGGAGGADGPGVQEREQALCTLLGQQLHIILTAAPAKCPQL 676
Query: 96 ALCGGDGAAALREPGAGLRLLRFLCSELQATRLLCL 131
C PGA L LL L LQ +LL L
Sbjct: 677 PSC----------PGALLLLL--LLQPLQLPQLLRL 700
>gi|239755499 PREDICTED: hypothetical protein [Homo sapiens]
Length = 516
Score = 31.2 bits (69), Expect = 1.4
Identities = 46/144 (31%), Positives = 56/144 (38%), Gaps = 8/144 (5%)
Query: 6 AEAWEGAAVAQDLLALGYGGVPGAASRGASCPDFRGLCVRLAAELATLGALEQQREAGAE 65
AEA EG A AQ LA G PG A GL V+LA L ++ +
Sbjct: 228 AEAQEGIAHAQADLASELGTCPGTRQPKAGLAVGDGL-VKLAQLLVAACQVQVALQEEVG 286
Query: 66 VLSAGDGPGAEEDFLRQLGSLLRELHCPDRALCGGDGAAALREPGAGLR-LLRFLCSELQ 124
+L + L LL H G D AA E +R LL+ LC LQ
Sbjct: 287 ILQLPGRVDLDHSELHTATHLLVAAH----LRVGCDQAAQHAEAPHEVRALLQHLCPHLQ 342
Query: 125 ATRLLCLRSLLDPSPRPPLGEGVV 148
LLCL L+ P L G+V
Sbjct: 343 C--LLCLVGLVQLEPLLDLLLGLV 364
>gi|239750031 PREDICTED: hypothetical protein [Homo sapiens]
Length = 356
Score = 31.2 bits (69), Expect = 1.4
Identities = 46/144 (31%), Positives = 56/144 (38%), Gaps = 8/144 (5%)
Query: 6 AEAWEGAAVAQDLLALGYGGVPGAASRGASCPDFRGLCVRLAAELATLGALEQQREAGAE 65
AEA EG A AQ LA G PG A GL V+LA L ++ +
Sbjct: 68 AEAQEGIAHAQADLASELGTCPGTRQPKAGLAVGDGL-VKLAQLLVAACQVQVALQEEVG 126
Query: 66 VLSAGDGPGAEEDFLRQLGSLLRELHCPDRALCGGDGAAALREPGAGLR-LLRFLCSELQ 124
+L + L LL H G D AA E +R LL+ LC LQ
Sbjct: 127 ILQLPGRVDLDHSELHTATHLLVAAH----LRVGCDQAAQHAEAPHEVRALLQHLCPHLQ 182
Query: 125 ATRLLCLRSLLDPSPRPPLGEGVV 148
LLCL L+ P L G+V
Sbjct: 183 C--LLCLVGLVQLEPLLDLLLGLV 204
>gi|239744342 PREDICTED: hypothetical protein XP_002343123 [Homo
sapiens]
Length = 356
Score = 31.2 bits (69), Expect = 1.4
Identities = 46/144 (31%), Positives = 56/144 (38%), Gaps = 8/144 (5%)
Query: 6 AEAWEGAAVAQDLLALGYGGVPGAASRGASCPDFRGLCVRLAAELATLGALEQQREAGAE 65
AEA EG A AQ LA G PG A GL V+LA L ++ +
Sbjct: 68 AEAQEGIAHAQADLASELGTCPGTRQPKAGLAVGDGL-VKLAQLLVAACQVQVALQEEVG 126
Query: 66 VLSAGDGPGAEEDFLRQLGSLLRELHCPDRALCGGDGAAALREPGAGLR-LLRFLCSELQ 124
+L + L LL H G D AA E +R LL+ LC LQ
Sbjct: 127 ILQLPGRVDLDHSELHTATHLLVAAH----LRVGCDQAAQHAEAPHEVRALLQHLCPHLQ 182
Query: 125 ATRLLCLRSLLDPSPRPPLGEGVV 148
LLCL L+ P L G+V
Sbjct: 183 C--LLCLVGLVQLEPLLDLLLGLV 204
>gi|15277342 estradiol 17 beta-dehydrogenase 8 [Homo sapiens]
Length = 261
Score = 31.2 bits (69), Expect = 1.4
Identities = 18/45 (40%), Positives = 24/45 (53%)
Query: 33 GASCPDFRGLCVRLAAELATLGALEQQREAGAEVLSAGDGPGAEE 77
GA R + VRLA E AT+ A + R A E + GPG++E
Sbjct: 18 GAGSGIGRAVSVRLAGEGATVAACDLDRAAAQETVRLLGGPGSKE 62
>gi|148528975 LON peptidase N-terminal domain and ring finger 2
[Homo sapiens]
Length = 754
Score = 31.2 bits (69), Expect = 1.4
Identities = 27/80 (33%), Positives = 35/80 (43%), Gaps = 3/80 (3%)
Query: 33 GASCPDFRGLCVRLAAELATLGALEQQREAGAEVLSAGDGPGAEEDFLRQLGSLLRELHC 92
G + PD RGLC+RL LA G L + GA +A G E+ G L+R +
Sbjct: 52 GLAQPD-RGLCLRLGDALARAGRLPE--ALGAFRGAARLGALRPEELEELAGGLVRAVGL 108
Query: 93 PDRALCGGDGAAALREPGAG 112
DR L + PG G
Sbjct: 109 RDRPLSAENPGGEPEAPGEG 128
>gi|164519026 galactosidase, beta 1 like 3 [Homo sapiens]
Length = 653
Score = 31.2 bits (69), Expect = 1.4
Identities = 16/48 (33%), Positives = 26/48 (54%)
Query: 177 QLLQELHAKISELQPSLPPGSLQPLLSCSLDAPRWEALESLSQSLRDQ 224
+L Q + A P LPP ++ P + SL P W+AL L++ +R +
Sbjct: 387 KLFQSVSATPLPRVPKLPPKAVYPPVRPSLYLPLWDALSYLNEPVRSR 434
Database: hs.faa
Posted date: Aug 4, 2009 4:42 PM
Number of letters in database: 18,247,518
Number of sequences in database: 37,866
Lambda K H
0.319 0.136 0.414
Gapped
Lambda K H
0.267 0.0410 0.140
Matrix: BLOSUM62
Gap Penalties: Existence: 11, Extension: 1
Number of Hits to DB: 16,070,588
Number of Sequences: 37866
Number of extensions: 872576
Number of successful extensions: 2967
Number of sequences better than 10.0: 30
Number of HSP's better than 10.0 without gapping: 13
Number of HSP's successfully gapped in prelim test: 86
Number of HSP's that attempted gapping in prelim test: 2909
Number of HSP's gapped (non-prelim): 127
length of query: 349
length of database: 18,247,518
effective HSP length: 103
effective length of query: 246
effective length of database: 14,347,320
effective search space: 3529440720
effective search space used: 3529440720
T: 11
A: 40
X1: 16 ( 7.4 bits)
X2: 38 (14.6 bits)
X3: 64 (24.7 bits)
S1: 41 (21.7 bits)
S2: 62 (28.5 bits)
Search results were obtained with NCBI BLAST and RefSeq entries.
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Guide to the Human Genome
Copyright © 2010 by Stewart Scherer. All rights reserved.