Guide to the Human Genome
Home | Table of Contents | Search text | Search genes | Search sequences | Purchase | FAQ | Blog | Help

Search of human proteins with 239746757

BLASTP 2.2.11 [Jun-05-2005]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= gi|239746757 PREDICTED: hypothetical protein XP_002343835 [Homo
sapiens]
         (281 letters)

Database: hs.faa 
           37,866 sequences; 18,247,518 total letters

Searching..................................................done

                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

gi|239746757 PREDICTED: hypothetical protein XP_002343835 [Homo ...   586   e-168
gi|239752237 PREDICTED: hypothetical protein XP_002348168 [Homo ...   413   e-116
gi|239757743 PREDICTED: hypothetical protein [Homo sapiens]           321   5e-88
gi|113416996 PREDICTED: ankyrin repeat domain 33B [Homo sapiens]       37   0.015
gi|239750574 PREDICTED: hypothetical protein [Homo sapiens]            37   0.019
gi|169205732 PREDICTED: hypothetical protein [Homo sapiens]            37   0.019
gi|239745104 PREDICTED: hypothetical protein XP_002343360 [Homo ...    37   0.025
gi|239756517 PREDICTED: hypothetical protein [Homo sapiens]            34   0.13 
gi|21704281 junctophilin 2 isoform 1 [Homo sapiens]                    34   0.13 
gi|169206171 PREDICTED: hypothetical protein [Homo sapiens]            33   0.36 
gi|239751026 PREDICTED: hypothetical protein XP_002347678 [Homo ...    33   0.36 
gi|169206489 PREDICTED: hypothetical protein [Homo sapiens]            33   0.36 
gi|239745455 PREDICTED: hypothetical protein XP_002343496 [Homo ...    33   0.36 
gi|169205942 PREDICTED: hypothetical protein [Homo sapiens]            33   0.36 
gi|239754327 PREDICTED: chromosome 6 open reading frame 132 [Hom...    32   0.48 
gi|239753698 PREDICTED: hypothetical protein [Homo sapiens]            32   0.48 
gi|239753692 PREDICTED: hypothetical protein XP_002345754 [Homo ...    32   0.48 
gi|239748855 PREDICTED: chromosome 6 open reading frame 132 [Hom...    32   0.48 
gi|239748278 PREDICTED: hypothetical protein [Homo sapiens]            32   0.48 
gi|239742884 PREDICTED: hypothetical protein LOC647024 [Homo sap...    32   0.48 
gi|51896035 G protein-coupled receptor kinase 6 isoform B [Homo ...    32   0.48 
gi|32698936 B-cell CLL/lymphoma 9-like [Homo sapiens]                  32   0.48 
gi|169165712 PREDICTED: hypothetical protein [Homo sapiens]            32   0.62 
gi|239753682 PREDICTED: hypothetical protein XP_002345751 [Homo ...    32   0.62 
gi|239748296 PREDICTED: hypothetical protein [Homo sapiens]            32   0.62 
gi|88971283 PREDICTED: hypothetical protein [Homo sapiens]             32   0.62 
gi|239742194 PREDICTED: hypothetical protein XP_002342449 [Homo ...    32   0.62 
gi|41146634 PREDICTED: hypothetical protein [Homo sapiens]             32   0.62 
gi|24308289 leukocyte receptor cluster (LRC) member 1 [Homo sapi...    32   0.62 
gi|169202389 PREDICTED: similar to mCG50504 [Homo sapiens]             32   0.81 

>gi|239746757 PREDICTED: hypothetical protein XP_002343835 [Homo
           sapiens]
          Length = 281

 Score =  586 bits (1510), Expect = e-168
 Identities = 281/281 (100%), Positives = 281/281 (100%)

Query: 1   MSPAPPRPTKTSSLCTVSPDYTLGPCNVASISWHPLTHYVLGKQLNCKASRALARDRAGA 60
           MSPAPPRPTKTSSLCTVSPDYTLGPCNVASISWHPLTHYVLGKQLNCKASRALARDRAGA
Sbjct: 1   MSPAPPRPTKTSSLCTVSPDYTLGPCNVASISWHPLTHYVLGKQLNCKASRALARDRAGA 60

Query: 61  PSCPAGIPIVCSEDDQRLFKQPQPRAARTSATVTSSRGRPPRELGTRTPGYMPIRTGSRP 120
           PSCPAGIPIVCSEDDQRLFKQPQPRAARTSATVTSSRGRPPRELGTRTPGYMPIRTGSRP
Sbjct: 61  PSCPAGIPIVCSEDDQRLFKQPQPRAARTSATVTSSRGRPPRELGTRTPGYMPIRTGSRP 120

Query: 121 VRRAALRDKGCAQRHRHVEVCEPQPSRRQLVQVGSGRAGVPIAAQVPIAEVVGKDQHDVG 180
           VRRAALRDKGCAQRHRHVEVCEPQPSRRQLVQVGSGRAGVPIAAQVPIAEVVGKDQHDVG
Sbjct: 121 VRRAALRDKGCAQRHRHVEVCEPQPSRRQLVQVGSGRAGVPIAAQVPIAEVVGKDQHDVG 180

Query: 181 RTGNGQASSQGQEEGPRCPHGHGTEGSYRETAGWDGTPPGPGHLQILERRSDPPRLAVRA 240
           RTGNGQASSQGQEEGPRCPHGHGTEGSYRETAGWDGTPPGPGHLQILERRSDPPRLAVRA
Sbjct: 181 RTGNGQASSQGQEEGPRCPHGHGTEGSYRETAGWDGTPPGPGHLQILERRSDPPRLAVRA 240

Query: 241 QGRGRKSLGADQRSRAGGKALEGAQEEPVPGCGRFRLGPAP 281
           QGRGRKSLGADQRSRAGGKALEGAQEEPVPGCGRFRLGPAP
Sbjct: 241 QGRGRKSLGADQRSRAGGKALEGAQEEPVPGCGRFRLGPAP 281


>gi|239752237 PREDICTED: hypothetical protein XP_002348168 [Homo
           sapiens]
          Length = 217

 Score =  413 bits (1062), Expect = e-116
 Identities = 199/199 (100%), Positives = 199/199 (100%)

Query: 83  QPRAARTSATVTSSRGRPPRELGTRTPGYMPIRTGSRPVRRAALRDKGCAQRHRHVEVCE 142
           QPRAARTSATVTSSRGRPPRELGTRTPGYMPIRTGSRPVRRAALRDKGCAQRHRHVEVCE
Sbjct: 19  QPRAARTSATVTSSRGRPPRELGTRTPGYMPIRTGSRPVRRAALRDKGCAQRHRHVEVCE 78

Query: 143 PQPSRRQLVQVGSGRAGVPIAAQVPIAEVVGKDQHDVGRTGNGQASSQGQEEGPRCPHGH 202
           PQPSRRQLVQVGSGRAGVPIAAQVPIAEVVGKDQHDVGRTGNGQASSQGQEEGPRCPHGH
Sbjct: 79  PQPSRRQLVQVGSGRAGVPIAAQVPIAEVVGKDQHDVGRTGNGQASSQGQEEGPRCPHGH 138

Query: 203 GTEGSYRETAGWDGTPPGPGHLQILERRSDPPRLAVRAQGRGRKSLGADQRSRAGGKALE 262
           GTEGSYRETAGWDGTPPGPGHLQILERRSDPPRLAVRAQGRGRKSLGADQRSRAGGKALE
Sbjct: 139 GTEGSYRETAGWDGTPPGPGHLQILERRSDPPRLAVRAQGRGRKSLGADQRSRAGGKALE 198

Query: 263 GAQEEPVPGCGRFRLGPAP 281
           GAQEEPVPGCGRFRLGPAP
Sbjct: 199 GAQEEPVPGCGRFRLGPAP 217


>gi|239757743 PREDICTED: hypothetical protein [Homo sapiens]
          Length = 235

 Score =  321 bits (822), Expect = 5e-88
 Identities = 152/152 (100%), Positives = 152/152 (100%)

Query: 130 GCAQRHRHVEVCEPQPSRRQLVQVGSGRAGVPIAAQVPIAEVVGKDQHDVGRTGNGQASS 189
           GCAQRHRHVEVCEPQPSRRQLVQVGSGRAGVPIAAQVPIAEVVGKDQHDVGRTGNGQASS
Sbjct: 84  GCAQRHRHVEVCEPQPSRRQLVQVGSGRAGVPIAAQVPIAEVVGKDQHDVGRTGNGQASS 143

Query: 190 QGQEEGPRCPHGHGTEGSYRETAGWDGTPPGPGHLQILERRSDPPRLAVRAQGRGRKSLG 249
           QGQEEGPRCPHGHGTEGSYRETAGWDGTPPGPGHLQILERRSDPPRLAVRAQGRGRKSLG
Sbjct: 144 QGQEEGPRCPHGHGTEGSYRETAGWDGTPPGPGHLQILERRSDPPRLAVRAQGRGRKSLG 203

Query: 250 ADQRSRAGGKALEGAQEEPVPGCGRFRLGPAP 281
           ADQRSRAGGKALEGAQEEPVPGCGRFRLGPAP
Sbjct: 204 ADQRSRAGGKALEGAQEEPVPGCGRFRLGPAP 235


>gi|113416996 PREDICTED: ankyrin repeat domain 33B [Homo sapiens]
          Length = 1006

 Score = 37.4 bits (85), Expect = 0.015
 Identities = 62/234 (26%), Positives = 80/234 (34%), Gaps = 58/234 (24%)

Query: 95  SSRGRPPRELGTRT----------PGYMPIRTGSRP-------------VRRAALRDKGC 131
           ++R  PPR  G  T          PG    R G R                R A R    
Sbjct: 63  AARSEPPRCEGVFTRNRCSRAPHPPGPCRCRVGGRQQALWLLLETLEDQATRTAGRASAL 122

Query: 132 AQRHRHVEVCEPQPSRRQLVQVGSGRAGVPIAAQVPIAEVVGKDQHDVGRTGNG-----Q 186
           AQRH  ++    +  +   V +G+ RA   +AA     ++ GK      R   G      
Sbjct: 123 AQRHVGLKPGPQRLRQPSCVHLGAARASHRLAAGGHAVKIGGKKGRKEARGTQGWWPPQS 182

Query: 187 ASSQGQEEG---------PRCPHGHGTEGSYRETAG--WD--GTPPGPGHLQILERRSDP 233
            +  G+E           PR  H    + SY E  G  W     PP P       R S  
Sbjct: 183 LTCDGRERTSAPLRRDLPPRLAH----DASYPEVKGSLWQILTRPPPP-------RPSPA 231

Query: 234 PRLAVRAQGRGRKSLGADQRSRA-----GGKALEGAQEEPVPGCG-RFRLGPAP 281
           P L  R QGR R ++G D   R      G   +  A    + GC  RFR  P P
Sbjct: 232 PGLTGRGQGRARGAVGLDCGCRPRPCSFGQPDVGSAPSRSLRGCSLRFRNTPPP 285


>gi|239750574 PREDICTED: hypothetical protein [Homo sapiens]
          Length = 1297

 Score = 37.0 bits (84), Expect = 0.019
 Identities = 52/180 (28%), Positives = 67/180 (37%), Gaps = 52/180 (28%)

Query: 120 PVRRAALRDKGCAQRHRHVEVCEPQPSRRQLVQVGSGRAGVPIAAQVPIAEV--VGKDQH 177
           P   A    +G A RH HV V  PQ +           AG P+ A + ++ V  VG   H
Sbjct: 647 PAAAAPTAREGRAGRHGHVAVVCPQVA-----------AGAPVGADLDVSVVLWVGVVGH 695

Query: 178 DVGR---TGNGQASSQGQEEGPR----CPHGHGTEGSYRETAGWDGTPPGP---GHLQIL 227
            +GR    G  +A+   +E GP        G G  G +R   GW G   GP     +Q+L
Sbjct: 696 -LGRGRGAGRAEAARAAREGGPHQGVFIQRGRGGLG-HRPLPGWRGQGVGPLAQPSVQVL 753

Query: 228 ERRSDPPRL----------------------AVRAQGRGRKSLGADQRSRAGGKALEGAQ 265
            R    P +                      AV  +GR R  LG     R    A EGAQ
Sbjct: 754 GRVPRDPAVGAATVAQGPVHGHVPVELTAAAAVSGRGRLRDGLG-----RVASVAAEGAQ 808


>gi|169205732 PREDICTED: hypothetical protein [Homo sapiens]
          Length = 1297

 Score = 37.0 bits (84), Expect = 0.019
 Identities = 52/180 (28%), Positives = 67/180 (37%), Gaps = 52/180 (28%)

Query: 120 PVRRAALRDKGCAQRHRHVEVCEPQPSRRQLVQVGSGRAGVPIAAQVPIAEV--VGKDQH 177
           P   A    +G A RH HV V  PQ +           AG P+ A + ++ V  VG   H
Sbjct: 647 PAAAAPTAREGRAGRHGHVAVVCPQVA-----------AGAPVGADLDVSVVLWVGVVGH 695

Query: 178 DVGR---TGNGQASSQGQEEGPR----CPHGHGTEGSYRETAGWDGTPPGP---GHLQIL 227
            +GR    G  +A+   +E GP        G G  G +R   GW G   GP     +Q+L
Sbjct: 696 -LGRGRGAGRAEAARAAREGGPHQGVFIQRGRGGLG-HRPLPGWRGQGVGPLAQPSVQVL 753

Query: 228 ERRSDPPRL----------------------AVRAQGRGRKSLGADQRSRAGGKALEGAQ 265
            R    P +                      AV  +GR R  LG     R    A EGAQ
Sbjct: 754 GRVPRDPAVGAATVAQGPVHGHVPVELTAAAAVSGRGRLRDGLG-----RVASVAAEGAQ 808


>gi|239745104 PREDICTED: hypothetical protein XP_002343360 [Homo
           sapiens]
          Length = 152

 Score = 36.6 bits (83), Expect = 0.025
 Identities = 30/78 (38%), Positives = 37/78 (47%), Gaps = 7/78 (8%)

Query: 201 GHGTEGSYRET-AGWDGTPPGPGHLQILERRSDPPRLAVRAQGRGRKSLGADQ-RSRAGG 258
           G G EG  R   AG +   PGP      E R DP RL    +  GR+  GA Q  + +GG
Sbjct: 31  GRGGEGDARTCGAGRERGLPGPA--LDTEPRWDPRRLCEALRAPGRRLEGAGQPPATSGG 88

Query: 259 KALEGAQEEP---VPGCG 273
            A  G  +EP   + GCG
Sbjct: 89  PATSGRSKEPWGHISGCG 106


>gi|239756517 PREDICTED: hypothetical protein [Homo sapiens]
          Length = 316

 Score = 34.3 bits (77), Expect = 0.13
 Identities = 44/162 (27%), Positives = 66/162 (40%), Gaps = 23/162 (14%)

Query: 26  CNVASISWHPLTHYVLGKQLNCKASRALARDRAGAP--SCPAGIPIVCSEDDQRLFKQPQ 83
           C  +S +WH     + G++ + +AS AL    A  P  + PA + I          K+ Q
Sbjct: 132 CRSSSCAWHRWPQ-LRGREADPRASPALLICIAPRPRPALPAALHIGARATAGLAAKRAQ 190

Query: 84  PR--AARTSATVTSSRGRPPRELGTRTPGYMPIRTG---------SRPVRRAALRDKGCA 132
           P+  +A T+A    +R  PP     R PG   +R+G          RP  R     +G A
Sbjct: 191 PQLCSAGTAARGRRTRASPPTPPRPRPPG---LRSGDVPRGGARVERPTGRRGAGGRGGA 247

Query: 133 QRHRHVEVCEPQPSRRQLVQVGSGRAGVPIAAQVPIAEVVGK 174
           QR        P P RR  +Q   G +      ++    +VGK
Sbjct: 248 QR------IPPWPLRRLSLQYLGGVSEYSNKQELEQEVIVGK 283


>gi|21704281 junctophilin 2 isoform 1 [Homo sapiens]
          Length = 696

 Score = 34.3 bits (77), Expect = 0.13
 Identities = 32/132 (24%), Positives = 46/132 (34%), Gaps = 18/132 (13%)

Query: 139 EVCEPQPSRRQLVQVGSGRAGVPIAAQVPIAEVVGKDQHDVGRTGNGQASSQGQEEGPRC 198
           E+ E   S  +    G+G AG+P     P  E     + +  R   G  S  G    P+ 
Sbjct: 441 EILENSESLLEPPDRGAGAAGLP----QPPRESPQLHERETPRPEGGSPSPAGTPPQPKR 496

Query: 199 PHGHGTEGSYRETAGWDGTPPGPGHLQILERRSDPPRLAVRAQGRGRKSLGADQRSRAGG 258
           P    ++        W+G P G G            R    ++G GR+S       R   
Sbjct: 497 PRPGVSKDGLLSPGAWNGEPSGEG-----------SRSVTPSEGAGRRSPARPATER--- 542

Query: 259 KALEGAQEEPVP 270
            A+E  Q  P P
Sbjct: 543 MAIEALQAPPAP 554


>gi|169206171 PREDICTED: hypothetical protein [Homo sapiens]
          Length = 466

 Score = 32.7 bits (73), Expect = 0.36
 Identities = 28/91 (30%), Positives = 35/91 (38%), Gaps = 7/91 (7%)

Query: 197 RCPHGHGTEGSYRETAGWDGTPPGPGHLQILERRSDPPRLAV------RAQGRGRKSLGA 250
           R P G  T+ ++   AG D  P  P       R  D    AV      R   R R +L  
Sbjct: 49  RVPRGSVTDSNHTP-AGLDCGPTRPSGSLTTRRPRDAGEAAVSGPSRQRRTSRARTALWG 107

Query: 251 DQRSRAGGKALEGAQEEPVPGCGRFRLGPAP 281
            +  RA G  L+ A   P P   +   GPAP
Sbjct: 108 RRSRRAAGPGLDCAGSAPAPSGAQSCGGPAP 138


>gi|239751026 PREDICTED: hypothetical protein XP_002347678 [Homo
           sapiens]
          Length = 304

 Score = 32.7 bits (73), Expect = 0.36
 Identities = 39/136 (28%), Positives = 56/136 (41%), Gaps = 23/136 (16%)

Query: 26  CNVASISWHPLTHYVLGKQLNCKASRALARDRAGAP--SCPAGIPIVCSEDDQRLFKQPQ 83
           C  +S +WH     + G++   +AS AL    A  P  + PA + I          K+ Q
Sbjct: 132 CRSSSCAWHRWPQ-LRGREAEPRASPALLICIAPRPRPALPAALHIGARATAGLAAKRAQ 190

Query: 84  PR--AARTSATVTSSRGRPPRELGTRTPGYMPIRTG---------SRPVRRAALRDKGCA 132
           P+  +A T+A    +R  PP     R PG   +R+G          RP  R     +G A
Sbjct: 191 PQLCSAGTAARGRRTRASPPTPPRPRPPG---LRSGDVPRGGARVERPTGRRGAGGRGGA 247

Query: 133 QRHRHVEVCEPQPSRR 148
           QR        P+P RR
Sbjct: 248 QR------IPPRPLRR 257


>gi|169206489 PREDICTED: hypothetical protein [Homo sapiens]
          Length = 564

 Score = 32.7 bits (73), Expect = 0.36
 Identities = 28/91 (30%), Positives = 35/91 (38%), Gaps = 7/91 (7%)

Query: 197 RCPHGHGTEGSYRETAGWDGTPPGPGHLQILERRSDPPRLAV------RAQGRGRKSLGA 250
           R P G  T+ ++   AG D  P  P       R  D    AV      R   R R +L  
Sbjct: 49  RVPRGSVTDSNHTP-AGLDCGPTRPSGSLTTRRPRDAGEAAVSGPSRQRRTSRARTALWG 107

Query: 251 DQRSRAGGKALEGAQEEPVPGCGRFRLGPAP 281
            +  RA G  L+ A   P P   +   GPAP
Sbjct: 108 RRSRRAAGPGLDCAGSAPAPSGAQSCGGPAP 138


>gi|239745455 PREDICTED: hypothetical protein XP_002343496 [Homo
           sapiens]
          Length = 304

 Score = 32.7 bits (73), Expect = 0.36
 Identities = 39/136 (28%), Positives = 56/136 (41%), Gaps = 23/136 (16%)

Query: 26  CNVASISWHPLTHYVLGKQLNCKASRALARDRAGAP--SCPAGIPIVCSEDDQRLFKQPQ 83
           C  +S +WH     + G++   +AS AL    A  P  + PA + I          K+ Q
Sbjct: 132 CRSSSCAWHRWPQ-LRGREAEPRASPALLICIAPRPRPALPAALHIGARATAGLAAKRAQ 190

Query: 84  PR--AARTSATVTSSRGRPPRELGTRTPGYMPIRTG---------SRPVRRAALRDKGCA 132
           P+  +A T+A    +R  PP     R PG   +R+G          RP  R     +G A
Sbjct: 191 PQLCSAGTAARGRRTRASPPTPPRPRPPG---LRSGDVPRGGARVERPTGRRGAGGRGGA 247

Query: 133 QRHRHVEVCEPQPSRR 148
           QR        P+P RR
Sbjct: 248 QR------IPPRPLRR 257


>gi|169205942 PREDICTED: hypothetical protein [Homo sapiens]
          Length = 564

 Score = 32.7 bits (73), Expect = 0.36
 Identities = 28/91 (30%), Positives = 35/91 (38%), Gaps = 7/91 (7%)

Query: 197 RCPHGHGTEGSYRETAGWDGTPPGPGHLQILERRSDPPRLAV------RAQGRGRKSLGA 250
           R P G  T+ ++   AG D  P  P       R  D    AV      R   R R +L  
Sbjct: 49  RVPRGSVTDSNHTP-AGLDCGPTRPSGSLTTRRPRDAGEAAVSGPSRQRRTSRARTALWG 107

Query: 251 DQRSRAGGKALEGAQEEPVPGCGRFRLGPAP 281
            +  RA G  L+ A   P P   +   GPAP
Sbjct: 108 RRSRRAAGPGLDCAGSAPAPSGAQSCGGPAP 138


>gi|239754327 PREDICTED: chromosome 6 open reading frame 132 [Homo
           sapiens]
          Length = 1188

 Score = 32.3 bits (72), Expect = 0.48
 Identities = 41/173 (23%), Positives = 63/173 (36%), Gaps = 19/173 (10%)

Query: 2   SPAPPRPTKTSSLCTVSPDYTLGPCNVASISWHPLTHYVLGKQLNCKASRALARDRAGAP 61
           +P P  P K +      P  TLGP      +  P T       L   +  A+A   + A 
Sbjct: 646 TPEPAIPPKATLWPATPPKATLGPATPLKATSGPTT------PLKATSGPAIA---STAT 696

Query: 62  SCPAGIPIVCSEDDQRLFKQPQPRAARTSATVTSSRGR-PPREL------GTRTPGYMPI 114
           + P     + +E D     QP+  A++  +T + +RG   P E       G R+    P 
Sbjct: 697 TLPTTTSQLMAEKDSGPAGQPEKPASQEVSTPSQARGEGSPSEATRLPTQGARSSAAFPP 756

Query: 115 RTGSRPVRRAALRDKGCAQRHRHVEVCEPQPSRRQLVQVGSGRAGVPIAAQVP 167
           +T         L    C Q     EV    P+   L + G+   G P+  + P
Sbjct: 757 KTSPGGGEVPCLYKPHCHQSSLSREVAVVMPT---LARGGAAGPGEPVEVKEP 806


>gi|239753698 PREDICTED: hypothetical protein [Homo sapiens]
          Length = 416

 Score = 32.3 bits (72), Expect = 0.48
 Identities = 39/149 (26%), Positives = 59/149 (39%), Gaps = 30/149 (20%)

Query: 60  APSCPAGIPIVCSEDDQRLFKQPQPRAARTSATVTSSRGRPP----RELGTRTPGYMPIR 115
           +PS P+  P+   E ++      + R   ++      RGR P        TR   + P R
Sbjct: 184 SPSVPSRSPLPEREPERT---DDRSRVESSARAGDQRRGREPTSRDHRAATRRAAHGPFR 240

Query: 116 TGSRPVRRAALRDKGCAQRHRHVEVCEPQPSRRQLVQVGSGRAGVPIAAQVPIAEVVGKD 175
              R  RR        +Q   H+++C       + + V S R         P+AE     
Sbjct: 241 ---RRERRKPRPRSESSQLACHLDLCF------KWLPVASSRR--------PVAEA---- 279

Query: 176 QHDVGRTGNGQASSQGQEEGPRCPHGHGT 204
             + GR   G AS++G EEG R P G G+
Sbjct: 280 --EPGRPEFGSASTRGCEEGRRVPRGTGS 306


>gi|239753692 PREDICTED: hypothetical protein XP_002345754 [Homo
           sapiens]
          Length = 228

 Score = 32.3 bits (72), Expect = 0.48
 Identities = 24/76 (31%), Positives = 31/76 (40%), Gaps = 8/76 (10%)

Query: 177 HDVGRTGNGQASSQGQEEGPRCPHGHGTEGSYRETAGWDGTPPGPGHL-------QILER 229
           H  G   N   +    E G R     GT G+  + AGW   P  P HL       Q+   
Sbjct: 9   HTPGAPENKSFAGAWAETGVRRARRRGTVGTEPQAAGW-ALPASPRHLPARIGSAQLGFT 67

Query: 230 RSDPPRLAVRAQGRGR 245
           R+ PPR+  RA+   R
Sbjct: 68  RALPPRVPARARSAPR 83


>gi|239748855 PREDICTED: chromosome 6 open reading frame 132 [Homo
           sapiens]
          Length = 1188

 Score = 32.3 bits (72), Expect = 0.48
 Identities = 41/173 (23%), Positives = 63/173 (36%), Gaps = 19/173 (10%)

Query: 2   SPAPPRPTKTSSLCTVSPDYTLGPCNVASISWHPLTHYVLGKQLNCKASRALARDRAGAP 61
           +P P  P K +      P  TLGP      +  P T       L   +  A+A   + A 
Sbjct: 646 TPEPAIPPKATLWPATPPKATLGPATPLKATSGPTT------PLKATSGPAIA---STAT 696

Query: 62  SCPAGIPIVCSEDDQRLFKQPQPRAARTSATVTSSRGR-PPREL------GTRTPGYMPI 114
           + P     + +E D     QP+  A++  +T + +RG   P E       G R+    P 
Sbjct: 697 TLPTTTSQLMAEKDSGPAGQPEKPASQEVSTPSQARGEGSPSEATRLPTQGARSSAAFPP 756

Query: 115 RTGSRPVRRAALRDKGCAQRHRHVEVCEPQPSRRQLVQVGSGRAGVPIAAQVP 167
           +T         L    C Q     EV    P+   L + G+   G P+  + P
Sbjct: 757 KTSPGGGEVPCLYKPHCHQSSLSREVAVVMPT---LARGGAAGPGEPVEVKEP 806


>gi|239748278 PREDICTED: hypothetical protein [Homo sapiens]
          Length = 416

 Score = 32.3 bits (72), Expect = 0.48
 Identities = 39/149 (26%), Positives = 59/149 (39%), Gaps = 30/149 (20%)

Query: 60  APSCPAGIPIVCSEDDQRLFKQPQPRAARTSATVTSSRGRPP----RELGTRTPGYMPIR 115
           +PS P+  P+   E ++      + R   ++      RGR P        TR   + P R
Sbjct: 184 SPSVPSRSPLPEREPERT---DDRSRVESSARAGDQRRGREPTSRDHRAATRRAAHGPFR 240

Query: 116 TGSRPVRRAALRDKGCAQRHRHVEVCEPQPSRRQLVQVGSGRAGVPIAAQVPIAEVVGKD 175
              R  RR        +Q   H+++C       + + V S R         P+AE     
Sbjct: 241 ---RRERRKPRPRSESSQLACHLDLCF------KWLPVASSRR--------PVAEA---- 279

Query: 176 QHDVGRTGNGQASSQGQEEGPRCPHGHGT 204
             + GR   G AS++G EEG R P G G+
Sbjct: 280 --EPGRPEFGSASTRGCEEGRRVPRGTGS 306


>gi|239742884 PREDICTED: hypothetical protein LOC647024 [Homo
           sapiens]
          Length = 1188

 Score = 32.3 bits (72), Expect = 0.48
 Identities = 41/173 (23%), Positives = 63/173 (36%), Gaps = 19/173 (10%)

Query: 2   SPAPPRPTKTSSLCTVSPDYTLGPCNVASISWHPLTHYVLGKQLNCKASRALARDRAGAP 61
           +P P  P K +      P  TLGP      +  P T       L   +  A+A   + A 
Sbjct: 646 TPEPAIPPKATLWPATPPKATLGPATPLKATSGPTT------PLKATSGPAIA---STAT 696

Query: 62  SCPAGIPIVCSEDDQRLFKQPQPRAARTSATVTSSRGR-PPREL------GTRTPGYMPI 114
           + P     + +E D     QP+  A++  +T + +RG   P E       G R+    P 
Sbjct: 697 TLPTTTSQLMAEKDSGPAGQPEKPASQEVSTPSQARGEGSPSEATRLPTQGARSSAAFPP 756

Query: 115 RTGSRPVRRAALRDKGCAQRHRHVEVCEPQPSRRQLVQVGSGRAGVPIAAQVP 167
           +T         L    C Q     EV    P+   L + G+   G P+  + P
Sbjct: 757 KTSPGGGEVPCLYKPHCHQSSLSREVAVVMPT---LARGGAAGPGEPVEVKEP 806


>gi|51896035 G protein-coupled receptor kinase 6 isoform B [Homo
           sapiens]
          Length = 589

 Score = 32.3 bits (72), Expect = 0.48
 Identities = 16/45 (35%), Positives = 20/45 (44%)

Query: 203 GTEGSYRETAGWDGTPPGPGHLQILERRSDPPRLAVRAQGRGRKS 247
           G +GS      W G PP P    +L+R     R+AV      RKS
Sbjct: 528 GLDGSVPPDLDWKGQPPAPPKKGLLQRLFSRQRIAVETAATARKS 572


>gi|32698936 B-cell CLL/lymphoma 9-like [Homo sapiens]
          Length = 1499

 Score = 32.3 bits (72), Expect = 0.48
 Identities = 36/134 (26%), Positives = 56/134 (41%), Gaps = 9/134 (6%)

Query: 143 PQPSRRQLVQVG--SGRAGVPIAAQVPIAEVVGKDQHDVGRTGNGQASSQGQ--EEGPRC 198
           P P RR+       S R   P A   P+        H  G+TGNG A SQ Q   +GP C
Sbjct: 11  PHPRRREAPGSPPLSPRGHCPPAPAKPMHPENKLTNH--GKTGNGGAQSQHQNVNQGPTC 68

Query: 199 PHGHGTEGSYRETAGWDGTPPGPGHLQILERRSDPPRLAVRAQGRGRKSLGAD--QRSRA 256
             G    G+    A  +   P    L+   +   PP  +++ + +  +S+  D  ++  A
Sbjct: 69  NVGSKGVGAGNHGAKANQISPSNSSLK-NPQAGVPPFSSLKGKVKRDRSVSVDSGEQREA 127

Query: 257 GGKALEGAQEEPVP 270
           G  +L+   +E  P
Sbjct: 128 GTPSLDSEAKEVAP 141


>gi|169165712 PREDICTED: hypothetical protein [Homo sapiens]
          Length = 199

 Score = 32.0 bits (71), Expect = 0.62
 Identities = 16/40 (40%), Positives = 17/40 (42%), Gaps = 3/40 (7%)

Query: 181 RTGNGQASSQGQEEGPRCPHGHGTEGSYRETAGWDGTPPG 220
           RT       QG    PRCP   G+  S    AGW   PPG
Sbjct: 93  RTARSPGGGQGGSASPRCPRDCGSGASAWAVAGW---PPG 129


>gi|239753682 PREDICTED: hypothetical protein XP_002345751 [Homo
           sapiens]
          Length = 186

 Score = 32.0 bits (71), Expect = 0.62
 Identities = 35/154 (22%), Positives = 57/154 (37%), Gaps = 16/154 (10%)

Query: 108 TPGYMPIRTGSRPVRRAALRDKGCAQRHRHVEVCEPQPS--RRQLVQVGSGRAGVPIAAQ 165
           +PG     +G+R  R  +LR   C  +  ++ +   +P+  R QL  V  G +G      
Sbjct: 20  SPGCTSHSSGNRAARGDSLRSSSCGLKGLNLALAPERPAADRAQLFAVAVGASGEAPGRP 79

Query: 166 VPIAEVVGKDQHDVGRTGNGQASSQ-----------GQEEGPRCPHGHGTEGSYRETAGW 214
            P   V G  +        G+   Q           G+ +    P         R  AG 
Sbjct: 80  RPPGGVRGLGRRPAAGPREGRTGQQLTFFVCSRMNGGRRQAEAFPPAESQREKQR--AGS 137

Query: 215 DGTPPGPGHLQILER-RSDPPRLAVRAQGRGRKS 247
             T P P  +++ ++  + PPR  +R   R R S
Sbjct: 138 KSTAPTPFSVRVRQKMATTPPRPTLRNPVRCRAS 171


>gi|239748296 PREDICTED: hypothetical protein [Homo sapiens]
          Length = 186

 Score = 32.0 bits (71), Expect = 0.62
 Identities = 35/154 (22%), Positives = 57/154 (37%), Gaps = 16/154 (10%)

Query: 108 TPGYMPIRTGSRPVRRAALRDKGCAQRHRHVEVCEPQPS--RRQLVQVGSGRAGVPIAAQ 165
           +PG     +G+R  R  +LR   C  +  ++ +   +P+  R QL  V  G +G      
Sbjct: 20  SPGCTSHSSGNRAARGDSLRSSSCGLKGLNLALAPERPAADRAQLFAVAVGASGEAPGRP 79

Query: 166 VPIAEVVGKDQHDVGRTGNGQASSQ-----------GQEEGPRCPHGHGTEGSYRETAGW 214
            P   V G  +        G+   Q           G+ +    P         R  AG 
Sbjct: 80  RPPGGVRGLGRRPAAGPREGRTGQQLTFFVCSRMNGGRRQAEAFPPAESQREKQR--AGS 137

Query: 215 DGTPPGPGHLQILER-RSDPPRLAVRAQGRGRKS 247
             T P P  +++ ++  + PPR  +R   R R S
Sbjct: 138 KSTAPTPFSVRVRQKMATTPPRPTLRNPVRCRAS 171


>gi|88971283 PREDICTED: hypothetical protein [Homo sapiens]
          Length = 199

 Score = 32.0 bits (71), Expect = 0.62
 Identities = 16/40 (40%), Positives = 17/40 (42%), Gaps = 3/40 (7%)

Query: 181 RTGNGQASSQGQEEGPRCPHGHGTEGSYRETAGWDGTPPG 220
           RT       QG    PRCP   G+  S    AGW   PPG
Sbjct: 93  RTARSPGGGQGGSASPRCPRDCGSGASAWAVAGW---PPG 129


>gi|239742194 PREDICTED: hypothetical protein XP_002342449 [Homo
           sapiens]
          Length = 186

 Score = 32.0 bits (71), Expect = 0.62
 Identities = 35/154 (22%), Positives = 57/154 (37%), Gaps = 16/154 (10%)

Query: 108 TPGYMPIRTGSRPVRRAALRDKGCAQRHRHVEVCEPQPS--RRQLVQVGSGRAGVPIAAQ 165
           +PG     +G+R  R  +LR   C  +  ++ +   +P+  R QL  V  G +G      
Sbjct: 20  SPGCTSHSSGNRAARGDSLRSSSCGLKGLNLALAPERPAADRAQLFAVAVGASGEAPGRP 79

Query: 166 VPIAEVVGKDQHDVGRTGNGQASSQ-----------GQEEGPRCPHGHGTEGSYRETAGW 214
            P   V G  +        G+   Q           G+ +    P         R  AG 
Sbjct: 80  RPPGGVRGLGRRPAAGPREGRTGQQLTFFVCSRMNGGRRQAEAFPPAESQREKQR--AGS 137

Query: 215 DGTPPGPGHLQILER-RSDPPRLAVRAQGRGRKS 247
             T P P  +++ ++  + PPR  +R   R R S
Sbjct: 138 KSTAPTPFSVRVRQKMATTPPRPTLRNPVRCRAS 171


>gi|41146634 PREDICTED: hypothetical protein [Homo sapiens]
          Length = 199

 Score = 32.0 bits (71), Expect = 0.62
 Identities = 16/40 (40%), Positives = 17/40 (42%), Gaps = 3/40 (7%)

Query: 181 RTGNGQASSQGQEEGPRCPHGHGTEGSYRETAGWDGTPPG 220
           RT       QG    PRCP   G+  S    AGW   PPG
Sbjct: 93  RTARSPGGGQGGSASPRCPRDCGSGASAWAVAGW---PPG 129


>gi|24308289 leukocyte receptor cluster (LRC) member 1 [Homo
           sapiens]
          Length = 264

 Score = 32.0 bits (71), Expect = 0.62
 Identities = 24/83 (28%), Positives = 42/83 (50%), Gaps = 12/83 (14%)

Query: 185 GQASSQGQEEGPRCPHGHGTEGSYRETAGWDGTPPGPGHLQILERRSDPPRLAVRAQGRG 244
           GQ++++ Q + P           Y+   G  G PPGP   + ++ R DP R   +  G+ 
Sbjct: 118 GQSAAEAQTQPPW----------YQLPPGRGGPPPGPAPDEKIKSRLDPLREMQKHLGKK 167

Query: 245 RKSLGADQRSRAGGKALEGAQEE 267
           R+  G D+ SR+  K  EG++++
Sbjct: 168 RQH-GGDEGSRS-RKEKEGSEKQ 188


>gi|169202389 PREDICTED: similar to mCG50504 [Homo sapiens]
          Length = 189

 Score = 31.6 bits (70), Expect = 0.81
 Identities = 19/64 (29%), Positives = 23/64 (35%)

Query: 218 PPGPGHLQILERRSDPPRLAVRAQGRGRKSLGADQRSRAGGKALEGAQEEPVPGCGRFRL 277
           PP    L   E R+DP R   +   RG K+    +  RA   A         P CG    
Sbjct: 103 PPSTAKLHREEDRTDPSRPPPKEPTRGSKTPAPARLGRAAATAATATTAAAAPQCGPASA 162

Query: 278 GPAP 281
            P P
Sbjct: 163 APPP 166


  Database: hs.faa
    Posted date:  Aug 4, 2009  4:42 PM
  Number of letters in database: 18,247,518
  Number of sequences in database:  37,866
  
Lambda     K      H
   0.316    0.134    0.420 

Gapped
Lambda     K      H
   0.267   0.0410    0.140 


Matrix: BLOSUM62
Gap Penalties: Existence: 11, Extension: 1
Number of Hits to DB: 14,571,601
Number of Sequences: 37866
Number of extensions: 832795
Number of successful extensions: 3122
Number of sequences better than 10.0: 30
Number of HSP's better than 10.0 without gapping: 20
Number of HSP's successfully gapped in prelim test: 130
Number of HSP's that attempted gapping in prelim test: 3026
Number of HSP's gapped (non-prelim): 230
length of query: 281
length of database: 18,247,518
effective HSP length: 101
effective length of query: 180
effective length of database: 14,423,052
effective search space: 2596149360
effective search space used: 2596149360
T: 11
A: 40
X1: 16 ( 7.3 bits)
X2: 38 (14.6 bits)
X3: 64 (24.7 bits)
S1: 41 (21.6 bits)
S2: 61 (28.1 bits)

Search results were obtained with NCBI BLAST and RefSeq entries.


Home | Table of Contents | Search text | Search genes | Search sequences | Purchase | FAQ | Blog | Help

Guide to the Human Genome
Copyright © 2010 by Stewart Scherer. All rights reserved.

CSHL Press