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Search of human proteins with 239746455
BLASTP 2.2.11 [Jun-05-2005]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= gi|239746455 PREDICTED: hypothetical protein XP_002344215 [Homo
sapiens]
(537 letters)
Database: hs.faa
37,866 sequences; 18,247,518 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
gi|239746455 PREDICTED: hypothetical protein XP_002344215 [Homo ... 1105 0.0
gi|239751973 PREDICTED: hypothetical protein XP_002348052 [Homo ... 1102 0.0
gi|169214772 PREDICTED: similar to hCG1783157 [Homo sapiens] 1096 0.0
gi|226529477 cystatin 9 precursor [Homo sapiens] 55 2e-07
gi|18104940 cystatin 9-like precursor [Homo sapiens] 44 3e-04
gi|4503105 cystatin SA precursor [Homo sapiens] 44 4e-04
gi|4503107 cystatin C precursor [Homo sapiens] 40 0.005
gi|4503109 cystatin S precursor [Homo sapiens] 40 0.005
gi|19882251 cystatin SN precursor [Homo sapiens] 40 0.007
gi|19882256 cystatin D precursor [Homo sapiens] 35 0.17
gi|122937269 Wilms tumor 1 interacting protein [Homo sapiens] 35 0.17
gi|239743164 PREDICTED: hypothetical protein [Homo sapiens] 34 0.39
gi|239508826 PREDICTED: hypothetical protein [Homo sapiens] 34 0.39
gi|169211489 PREDICTED: hypothetical protein [Homo sapiens] 33 0.86
gi|169210715 PREDICTED: hypothetical protein [Homo sapiens] 33 0.86
gi|148277064 cut-like homeobox 1 isoform a [Homo sapiens] 32 1.1
gi|157785645 SPEG complex locus [Homo sapiens] 32 1.5
gi|47551356 hypothetical protein LOC408029 [Homo sapiens] 32 1.9
gi|47524184 hypothetical protein LOC29798 [Homo sapiens] 32 1.9
gi|23111062 splicing factor, arginine/serine-rich 8 [Homo sapiens] 32 1.9
gi|205361109 multiple C2 domains, transmembrane 1 isoform L [Hom... 31 2.5
gi|169210256 PREDICTED: hypothetical protein [Homo sapiens] 31 3.3
gi|45439359 triple functional domain (PTPRF interacting) [Homo s... 31 3.3
gi|6274552 signal transducer and activator of transcription 1 is... 30 4.3
gi|21536301 signal transducer and activator of transcription 1 i... 30 4.3
gi|169167808 PREDICTED: hypothetical protein [Homo sapiens] 30 4.3
gi|113417039 PREDICTED: hypothetical protein [Homo sapiens] 30 4.3
gi|113416520 PREDICTED: hypothetical protein [Homo sapiens] 30 4.3
gi|5032281 dystrophin Dp427c isoform [Homo sapiens] 30 5.6
gi|5032307 dystrophin Dp140c isoform [Homo sapiens] 30 5.6
>gi|239746455 PREDICTED: hypothetical protein XP_002344215 [Homo
sapiens]
Length = 537
Score = 1105 bits (2857), Expect = 0.0
Identities = 537/537 (100%), Positives = 537/537 (100%)
Query: 1 MVAAGDTGRLDARTGAFIGEQWGVGTVGRGRLHRKPLSPSLVPGDEFWKIPSLRGQRSRG 60
MVAAGDTGRLDARTGAFIGEQWGVGTVGRGRLHRKPLSPSLVPGDEFWKIPSLRGQRSRG
Sbjct: 1 MVAAGDTGRLDARTGAFIGEQWGVGTVGRGRLHRKPLSPSLVPGDEFWKIPSLRGQRSRG 60
Query: 61 TLQKGVKGGRVNSDTDDSPVPTSPRVASAGLACFGGGGSGEEASERTLWKGSVSTSCLCF 120
TLQKGVKGGRVNSDTDDSPVPTSPRVASAGLACFGGGGSGEEASERTLWKGSVSTSCLCF
Sbjct: 61 TLQKGVKGGRVNSDTDDSPVPTSPRVASAGLACFGGGGSGEEASERTLWKGSVSTSCLCF 120
Query: 121 QDGLNLSGGTKAKQKKLCRTGNVHLRPQWAAHGPSLVSVQTCLASSLRPQVARQEGGTKE 180
QDGLNLSGGTKAKQKKLCRTGNVHLRPQWAAHGPSLVSVQTCLASSLRPQVARQEGGTKE
Sbjct: 121 QDGLNLSGGTKAKQKKLCRTGNVHLRPQWAAHGPSLVSVQTCLASSLRPQVARQEGGTKE 180
Query: 181 AGPGGAGGRSSTGLHWQHYLLVDLVSGPWVLFLSPTCPPGPAWGADTRIPFEKLMEAVAH 240
AGPGGAGGRSSTGLHWQHYLLVDLVSGPWVLFLSPTCPPGPAWGADTRIPFEKLMEAVAH
Sbjct: 181 AGPGGAGGRSSTGLHWQHYLLVDLVSGPWVLFLSPTCPPGPAWGADTRIPFEKLMEAVAH 240
Query: 241 SPENRECAPYGEQASLASVIMLSCLMKTVLLAKLNECSSLDSERIEWAINQEGASLPGEP 300
SPENRECAPYGEQASLASVIMLSCLMKTVLLAKLNECSSLDSERIEWAINQEGASLPGEP
Sbjct: 241 SPENRECAPYGEQASLASVIMLSCLMKTVLLAKLNECSSLDSERIEWAINQEGASLPGEP 300
Query: 301 ANITELRNWLTRGLRDFFFPGEPYMHYVRASQVGSRSPPGLLRAGLQLEEASLKSGYAED 360
ANITELRNWLTRGLRDFFFPGEPYMHYVRASQVGSRSPPGLLRAGLQLEEASLKSGYAED
Sbjct: 301 ANITELRNWLTRGLRDFFFPGEPYMHYVRASQVGSRSPPGLLRAGLQLEEASLKSGYAED 360
Query: 361 SHVVEGAPAHGTYCAEHPHLDHSKRIRRHQYFVASMEFAVAQFNEDNMEEYTHRLLEVQR 420
SHVVEGAPAHGTYCAEHPHLDHSKRIRRHQYFVASMEFAVAQFNEDNMEEYTHRLLEVQR
Sbjct: 361 SHVVEGAPAHGTYCAEHPHLDHSKRIRRHQYFVASMEFAVAQFNEDNMEEYTHRLLEVQR 420
Query: 421 AQQKVSGSHFVHSQNSLHRLNSSKPVVMAAGDLEMGLTICKKYDEDIDNCPLQEGSAEKK 480
AQQKVSGSHFVHSQNSLHRLNSSKPVVMAAGDLEMGLTICKKYDEDIDNCPLQEGSAEKK
Sbjct: 421 AQQKVSGSHFVHSQNSLHRLNSSKPVVMAAGDLEMGLTICKKYDEDIDNCPLQEGSAEKK 480
Query: 481 KLAANSKTSGTRAPGKEQDSARFLSVTGVDDNQWGQKSTFRELHGPSQISWYGGMKG 537
KLAANSKTSGTRAPGKEQDSARFLSVTGVDDNQWGQKSTFRELHGPSQISWYGGMKG
Sbjct: 481 KLAANSKTSGTRAPGKEQDSARFLSVTGVDDNQWGQKSTFRELHGPSQISWYGGMKG 537
>gi|239751973 PREDICTED: hypothetical protein XP_002348052 [Homo
sapiens]
Length = 537
Score = 1102 bits (2849), Expect = 0.0
Identities = 536/537 (99%), Positives = 536/537 (99%)
Query: 1 MVAAGDTGRLDARTGAFIGEQWGVGTVGRGRLHRKPLSPSLVPGDEFWKIPSLRGQRSRG 60
MVAAGDTGRLDARTGAFIGEQWGVGTVGRGRLHRKPLSPSLVPGDEFWKIPSLRGQRSRG
Sbjct: 1 MVAAGDTGRLDARTGAFIGEQWGVGTVGRGRLHRKPLSPSLVPGDEFWKIPSLRGQRSRG 60
Query: 61 TLQKGVKGGRVNSDTDDSPVPTSPRVASAGLACFGGGGSGEEASERTLWKGSVSTSCLCF 120
TLQKGVKGGRVNSDTDDSPVPTSPRVASAGLACFGGGGSGEEASERTLWKGSVSTSCLCF
Sbjct: 61 TLQKGVKGGRVNSDTDDSPVPTSPRVASAGLACFGGGGSGEEASERTLWKGSVSTSCLCF 120
Query: 121 QDGLNLSGGTKAKQKKLCRTGNVHLRPQWAAHGPSLVSVQTCLASSLRPQVARQEGGTKE 180
QDGLNLSGGTKAKQKKLCRTGNVHLRPQWAAHGPSLVSVQTCLASSLRPQVARQEGGTKE
Sbjct: 121 QDGLNLSGGTKAKQKKLCRTGNVHLRPQWAAHGPSLVSVQTCLASSLRPQVARQEGGTKE 180
Query: 181 AGPGGAGGRSSTGLHWQHYLLVDLVSGPWVLFLSPTCPPGPAWGADTRIPFEKLMEAVAH 240
AGPGGAGGRSSTGLHWQHYLLVDLVSGPWVLFLSPTCPPGPAWGADTRIPFEKLMEAVAH
Sbjct: 181 AGPGGAGGRSSTGLHWQHYLLVDLVSGPWVLFLSPTCPPGPAWGADTRIPFEKLMEAVAH 240
Query: 241 SPENRECAPYGEQASLASVIMLSCLMKTVLLAKLNECSSLDSERIEWAINQEGASLPGEP 300
SPENRECAPYGEQASLASVIMLSCLMKTVLLAKLNECSSLDSERIEWAINQEGASLPGEP
Sbjct: 241 SPENRECAPYGEQASLASVIMLSCLMKTVLLAKLNECSSLDSERIEWAINQEGASLPGEP 300
Query: 301 ANITELRNWLTRGLRDFFFPGEPYMHYVRASQVGSRSPPGLLRAGLQLEEASLKSGYAED 360
ANITELRNWLTRGLRDFFFPGEPYMHYVRASQVGSRSPPGLLRAGLQLEEASLKSGYAED
Sbjct: 301 ANITELRNWLTRGLRDFFFPGEPYMHYVRASQVGSRSPPGLLRAGLQLEEASLKSGYAED 360
Query: 361 SHVVEGAPAHGTYCAEHPHLDHSKRIRRHQYFVASMEFAVAQFNEDNMEEYTHRLLEVQR 420
SHVVEGAPAHGTYCAEHPHLDHSK IRRHQYFVASMEFAVAQFNEDNMEEYTHRLLEVQR
Sbjct: 361 SHVVEGAPAHGTYCAEHPHLDHSKIIRRHQYFVASMEFAVAQFNEDNMEEYTHRLLEVQR 420
Query: 421 AQQKVSGSHFVHSQNSLHRLNSSKPVVMAAGDLEMGLTICKKYDEDIDNCPLQEGSAEKK 480
AQQKVSGSHFVHSQNSLHRLNSSKPVVMAAGDLEMGLTICKKYDEDIDNCPLQEGSAEKK
Sbjct: 421 AQQKVSGSHFVHSQNSLHRLNSSKPVVMAAGDLEMGLTICKKYDEDIDNCPLQEGSAEKK 480
Query: 481 KLAANSKTSGTRAPGKEQDSARFLSVTGVDDNQWGQKSTFRELHGPSQISWYGGMKG 537
KLAANSKTSGTRAPGKEQDSARFLSVTGVDDNQWGQKSTFRELHGPSQISWYGGMKG
Sbjct: 481 KLAANSKTSGTRAPGKEQDSARFLSVTGVDDNQWGQKSTFRELHGPSQISWYGGMKG 537
>gi|169214772 PREDICTED: similar to hCG1783157 [Homo sapiens]
Length = 538
Score = 1096 bits (2835), Expect = 0.0
Identities = 535/538 (99%), Positives = 536/538 (99%), Gaps = 1/538 (0%)
Query: 1 MVAAGDTGRLDARTGAFIGEQWGVGTVGRGRLHRKPLSPSLVPGDEFWKIPSLRGQRSRG 60
MVAAGDTGRLDARTGAFIGEQWGVGTVGRGRLHRKPLSPSLVPGDEFWKIPSLRGQRSRG
Sbjct: 1 MVAAGDTGRLDARTGAFIGEQWGVGTVGRGRLHRKPLSPSLVPGDEFWKIPSLRGQRSRG 60
Query: 61 TLQKGVKGGRVNSDTDDSPVPTSPRVASAGLACFGGGGSGEEASERTLWKGSVSTSCLCF 120
TLQKGVKGGRVNSDTDDSPVPTSPRVASAGLACFGGGGSGEEASERTLWKGSVSTSCLCF
Sbjct: 61 TLQKGVKGGRVNSDTDDSPVPTSPRVASAGLACFGGGGSGEEASERTLWKGSVSTSCLCF 120
Query: 121 QDGLNLSGGTKAKQKKLCRTGNVHLRPQWAAHGPSLVSVQTCLASSLRPQVARQEGGTKE 180
QDGLNLSGGTKAKQKKLCRTGNVHLRPQWAAHGPSLVSVQTCLASSLRPQVARQEGGTKE
Sbjct: 121 QDGLNLSGGTKAKQKKLCRTGNVHLRPQWAAHGPSLVSVQTCLASSLRPQVARQEGGTKE 180
Query: 181 AGPGGAGGRSSTGLHWQHYLLVDLVSGPWVLFLSPTCPPGPAWGADTRIPFEKLMEAVAH 240
AGPGGAGGRSSTGLHWQHYLLVDLVSGPWVLFLSPTCPPGPAWGADTRIPFEKLMEAVAH
Sbjct: 181 AGPGGAGGRSSTGLHWQHYLLVDLVSGPWVLFLSPTCPPGPAWGADTRIPFEKLMEAVAH 240
Query: 241 SPENRECAPYGEQASLASVIMLSCLMKTVLLAKLNECSSLDSERIEWAINQEGASLPGEP 300
SPENRECAPYGEQASLASVIMLSCLMKTVLLAKLNECSSLDSERIEWAINQEGASLPGEP
Sbjct: 241 SPENRECAPYGEQASLASVIMLSCLMKTVLLAKLNECSSLDSERIEWAINQEGASLPGEP 300
Query: 301 ANITELRNWLTRGLRDFFFPGEPYMHYVRASQVGSRSPPGLLRAGL-QLEEASLKSGYAE 359
ANITELRNWLTRGLRDFFFPGEPY+HYVRASQVGSRSPPGLLRAGL QLEEASLKSGYAE
Sbjct: 301 ANITELRNWLTRGLRDFFFPGEPYLHYVRASQVGSRSPPGLLRAGLQQLEEASLKSGYAE 360
Query: 360 DSHVVEGAPAHGTYCAEHPHLDHSKRIRRHQYFVASMEFAVAQFNEDNMEEYTHRLLEVQ 419
DSHVVEGAPAHGTYCAEHPHLDHSKRIRRHQYFVASMEFAVAQFNEDNMEEYTHRLLEVQ
Sbjct: 361 DSHVVEGAPAHGTYCAEHPHLDHSKRIRRHQYFVASMEFAVAQFNEDNMEEYTHRLLEVQ 420
Query: 420 RAQQKVSGSHFVHSQNSLHRLNSSKPVVMAAGDLEMGLTICKKYDEDIDNCPLQEGSAEK 479
RAQQKVSGSHFVHSQNSLHRLNSSKP VMAAGDLEMGLTICKKYDEDIDNCPLQEGSAEK
Sbjct: 421 RAQQKVSGSHFVHSQNSLHRLNSSKPGVMAAGDLEMGLTICKKYDEDIDNCPLQEGSAEK 480
Query: 480 KKLAANSKTSGTRAPGKEQDSARFLSVTGVDDNQWGQKSTFRELHGPSQISWYGGMKG 537
KKLAANSKTSGTRAPGKEQDSARFLSVTGVDDNQWGQKSTFRELHGPSQISWYGGMKG
Sbjct: 481 KKLAANSKTSGTRAPGKEQDSARFLSVTGVDDNQWGQKSTFRELHGPSQISWYGGMKG 538
>gi|226529477 cystatin 9 precursor [Homo sapiens]
Length = 159
Score = 54.7 bits (130), Expect = 2e-07
Identities = 32/102 (31%), Positives = 58/102 (56%), Gaps = 13/102 (12%)
Query: 373 YCAEHPHLDHSKRIRRHQYFVASMEFAVAQFNEDNMEEYTHRLLEVQRAQQKVSGSHFVH 432
+C+E + + +I + F+A++EFA+ FN + EE+ +RLL V + +
Sbjct: 29 WCSEE-EMGGNNKIVQDPMFLATVEFALNTFNVQSKEEHAYRLLRVLSSWR--------- 78
Query: 433 SQNSLHRLNSSKPVVMAAGDLEMGLTICKKYDEDIDNCPLQE 474
++S+ R K V +L++ T+C+K+++DIDNCP QE
Sbjct: 79 -EDSMDRKWRGKMVFSM--NLQLRQTVCRKFEDDIDNCPFQE 117
>gi|18104940 cystatin 9-like precursor [Homo sapiens]
Length = 147
Score = 44.3 bits (103), Expect = 3e-04
Identities = 29/87 (33%), Positives = 42/87 (48%), Gaps = 17/87 (19%)
Query: 390 QYFVASMEFAVAQFNEDNMEEYTHRLLEVQRAQQKVSGSHFVHSQNSLHRLNSSKPVVMA 449
+Y A++EFAV FN+ + + Y +RL H NS SK V
Sbjct: 45 RYLPATVEFAVHTFNQQSKDYYAYRL---------------GHILNSWKEQVESKTVFSM 89
Query: 450 AGDLEMGLTICKKYDEDIDNCPLQEGS 476
+L +G T C K+++DIDNC QE +
Sbjct: 90 --ELLLGRTRCGKFEDDIDNCHFQEST 114
>gi|4503105 cystatin SA precursor [Homo sapiens]
Length = 141
Score = 43.9 bits (102), Expect = 4e-04
Identities = 32/123 (26%), Positives = 57/123 (46%), Gaps = 32/123 (26%)
Query: 359 EDSHVVEGAPAHGTYCAEHPHLDHSKRIRRHQYFVASMEFAVAQFNEDNMEEYTHRLLEV 418
E+ ++EG G Y A+ + +R++R ++ F ++++N+ +EY RLL V
Sbjct: 25 EEDRIIEG----GIYDADL----NDERVQR------ALHFVISEYNKATEDEYYRRLLRV 70
Query: 419 QRAQQKVSGSHFVHSQNSLHRLNSSKPVVMAAGDLEMGLTICKKYDEDIDNCPLQEGSAE 478
RA++++ G V D+E+G TIC K ++D C E
Sbjct: 71 LRAREQIVGG------------------VNYFFDIEVGRTICTKSQPNLDTCAFHEQPEL 112
Query: 479 KKK 481
+KK
Sbjct: 113 QKK 115
>gi|4503107 cystatin C precursor [Homo sapiens]
Length = 146
Score = 40.0 bits (92), Expect = 0.005
Identities = 23/89 (25%), Positives = 45/89 (50%), Gaps = 22/89 (24%)
Query: 395 SMEFAVAQFNEDNMEEYTHRLLEVQRAQQKVSG--SHFVHSQNSLHRLNSSKPVVMAAGD 452
+++FAV ++N+ + + Y R L+V RA++++ ++F+ D
Sbjct: 52 ALDFAVGEYNKASNDMYHSRALQVVRARKQIVAGVNYFL--------------------D 91
Query: 453 LEMGLTICKKYDEDIDNCPLQEGSAEKKK 481
+E+G T C K ++DNCP + K+K
Sbjct: 92 VELGRTTCTKTQPNLDNCPFHDQPHLKRK 120
>gi|4503109 cystatin S precursor [Homo sapiens]
Length = 141
Score = 40.0 bits (92), Expect = 0.005
Identities = 24/87 (27%), Positives = 41/87 (47%), Gaps = 18/87 (20%)
Query: 395 SMEFAVAQFNEDNMEEYTHRLLEVQRAQQKVSGSHFVHSQNSLHRLNSSKPVVMAAGDLE 454
++ FA++++N+ +EY R L+V RA+++ G V D+E
Sbjct: 47 ALHFAISEYNKATEDEYYRRPLQVLRAREQTFGG------------------VNYFFDVE 88
Query: 455 MGLTICKKYDEDIDNCPLQEGSAEKKK 481
+G TIC K ++D C E +KK
Sbjct: 89 VGRTICTKSQPNLDTCAFHEQPELQKK 115
>gi|19882251 cystatin SN precursor [Homo sapiens]
Length = 141
Score = 39.7 bits (91), Expect = 0.007
Identities = 24/87 (27%), Positives = 40/87 (45%), Gaps = 18/87 (20%)
Query: 395 SMEFAVAQFNEDNMEEYTHRLLEVQRAQQKVSGSHFVHSQNSLHRLNSSKPVVMAAGDLE 454
++ FA++++N+ ++Y R L V RA+Q+ G V D+E
Sbjct: 47 ALHFAISEYNKATKDDYYRRPLRVLRARQQTVGG------------------VNYFFDVE 88
Query: 455 MGLTICKKYDEDIDNCPLQEGSAEKKK 481
+G TIC K ++D C E +KK
Sbjct: 89 VGRTICTKSQPNLDTCAFHEQPELQKK 115
>gi|19882256 cystatin D precursor [Homo sapiens]
Length = 142
Score = 35.0 bits (79), Expect = 0.17
Identities = 21/81 (25%), Positives = 39/81 (48%), Gaps = 19/81 (23%)
Query: 395 SMEFAVAQFNED-NMEEYTHRLLEVQRAQQKVSGSHFVHSQNSLHRLNSSKPVVMAAGDL 453
+++FA++++N+ N +EY R L+V A Q++ G V ++
Sbjct: 47 ALDFAISEYNKVINKDEYYSRPLQVMAAYQQIVGG------------------VNYYFNV 88
Query: 454 EMGLTICKKYDEDIDNCPLQE 474
+ G T C K ++DNCP +
Sbjct: 89 KFGRTTCTKSQPNLDNCPFND 109
>gi|122937269 Wilms tumor 1 interacting protein [Homo sapiens]
Length = 430
Score = 35.0 bits (79), Expect = 0.17
Identities = 31/88 (35%), Positives = 40/88 (45%), Gaps = 12/88 (13%)
Query: 23 GVGTVGRGRLHRKPLSPSLVPGDEFWKIPSLRGQRSRGT------LQKGVKGGRVNSDTD 76
G G+ GRGR +P PGDE RG+ S G L +G +G R + +
Sbjct: 26 GCGSPGRGRRGPRP-----GPGDEAAPALGRRGKGSGGPEAGADGLSRGERGPRRAAVPE 80
Query: 77 DSPVPT-SPRVASAGLACFGGGGSGEEA 103
S P SPR + AG GGGGS +
Sbjct: 81 LSAQPAGSPRASLAGSDGGGGGGSARSS 108
>gi|239743164 PREDICTED: hypothetical protein [Homo sapiens]
Length = 222
Score = 33.9 bits (76), Expect = 0.39
Identities = 42/174 (24%), Positives = 67/174 (38%), Gaps = 15/174 (8%)
Query: 179 KEAGPGGAGGRSSTGLHWQHYLLVDLVSGPWVLFLSPTCPPGPA-W--GADTRIPFEKLM 235
+EAG +GG S W + + +GP F PG A W +++ E
Sbjct: 21 QEAGALDSGGCSEARASWAWRVRCEAETGPVQAFGRQEAGPGEADWRSSSESAEAAESQK 80
Query: 236 EAVAHSPENRECAPYGEQASLASVIMLSCLMKTVLLAKLNECSSLDSERIEWAI--NQEG 293
+ P A E + L L++T + E L R+ WA ++E
Sbjct: 81 WGLGRPPGGMNWAGPKEATGRQEDLGLEILIQTFAPGEAAERPELGLGRMIWACRGHREA 140
Query: 294 ASLPGEPANITELRNWLTRGLRDF-FFPGEPYMHYV------RASQVGSRSPPG 340
++PG+ +T W RG R+ PG+ Y+ V R ++G P G
Sbjct: 141 GAVPGQAYLMTV---WAYRGRREAGAVPGQAYLTTVWSCRGCREEELGLERPTG 191
>gi|239508826 PREDICTED: hypothetical protein [Homo sapiens]
Length = 222
Score = 33.9 bits (76), Expect = 0.39
Identities = 42/174 (24%), Positives = 67/174 (38%), Gaps = 15/174 (8%)
Query: 179 KEAGPGGAGGRSSTGLHWQHYLLVDLVSGPWVLFLSPTCPPGPA-W--GADTRIPFEKLM 235
+EAG +GG S W + + +GP F PG A W +++ E
Sbjct: 21 QEAGALDSGGCSEARASWAWRVRCEAETGPVQAFGRQEAGPGEADWRSSSESAEAAESQK 80
Query: 236 EAVAHSPENRECAPYGEQASLASVIMLSCLMKTVLLAKLNECSSLDSERIEWAI--NQEG 293
+ P A E + L L++T + E L R+ WA ++E
Sbjct: 81 WGLGRPPGGMNWAGPKEATGRQEDLGLEILIQTFAPGEAAERPELGLGRMIWACRGHREA 140
Query: 294 ASLPGEPANITELRNWLTRGLRDF-FFPGEPYMHYV------RASQVGSRSPPG 340
++PG+ +T W RG R+ PG+ Y+ V R ++G P G
Sbjct: 141 GAVPGQAYLMTV---WAYRGRREAGAVPGQAYLTTVWSCRGCREEELGLERPTG 191
>gi|169211489 PREDICTED: hypothetical protein [Homo sapiens]
Length = 176
Score = 32.7 bits (73), Expect = 0.86
Identities = 25/89 (28%), Positives = 41/89 (46%), Gaps = 5/89 (5%)
Query: 216 TCPPGPAWGADT-RIPFEKLMEAVAHSPENREC--APYGEQASLASVIML--SCLMKTVL 270
TCPPGPA + T PF + E +E +P G L ++++L S +K
Sbjct: 11 TCPPGPAPSSPTVSRPFPETTRDAGDKDEGKESFPSPNGALILLPTLLVLDFSSFLKGQR 70
Query: 271 LAKLNECSSLDSERIEWAINQEGASLPGE 299
+ K+++ + + +EW NQ L E
Sbjct: 71 VMKMDQDPPGEVKNMEWHHNQNRRGLRSE 99
>gi|169210715 PREDICTED: hypothetical protein [Homo sapiens]
Length = 176
Score = 32.7 bits (73), Expect = 0.86
Identities = 25/89 (28%), Positives = 41/89 (46%), Gaps = 5/89 (5%)
Query: 216 TCPPGPAWGADT-RIPFEKLMEAVAHSPENREC--APYGEQASLASVIML--SCLMKTVL 270
TCPPGPA + T PF + E +E +P G L ++++L S +K
Sbjct: 11 TCPPGPAPSSPTVSRPFPETTRDAGDKDEGKESFPSPNGALILLPTLLVLDFSSFLKGQR 70
Query: 271 LAKLNECSSLDSERIEWAINQEGASLPGE 299
+ K+++ + + +EW NQ L E
Sbjct: 71 VMKMDQDPPGEVKNMEWHHNQNRRGLRSE 99
>gi|148277064 cut-like homeobox 1 isoform a [Homo sapiens]
Length = 1505
Score = 32.3 bits (72), Expect = 1.1
Identities = 24/69 (34%), Positives = 30/69 (43%), Gaps = 1/69 (1%)
Query: 123 GLNLSGGTKAKQKKLCRTGN-VHLRPQWAAHGPSLVSVQTCLASSLRPQVARQEGGTKEA 181
GL+ G Q L + N V W H S V + A+S A + GG KE
Sbjct: 793 GLDPQGAADCAQGVLRQVKNEVGRSGAWKDHWWSAVQPERRNAASSEEAKAEETGGGKEK 852
Query: 182 GPGGAGGRS 190
G GG+GG S
Sbjct: 853 GSGGSGGGS 861
>gi|157785645 SPEG complex locus [Homo sapiens]
Length = 3267
Score = 32.0 bits (71), Expect = 1.5
Identities = 38/151 (25%), Positives = 59/151 (39%), Gaps = 15/151 (9%)
Query: 279 SLDSERIEWAINQEGASLPGEPANITELRN--WLTRGLRDFFFPGEPYMHYVRASQVGSR 336
++D + + + + + A +T LR W GLR G ++ V ++ V S
Sbjct: 1312 AIDPDSLTYTVQHQVLGSDQWTALVTGLREPGWAATGLRK----GVQHIFRVLSTTVKSS 1367
Query: 337 SPPG-------LLRAGLQLEEASLKSGYAEDSHVVEGAPAHGTYCAEHPHLDHSKRIRRH 389
S P LL G LEEA + +VVEG PA T H R R
Sbjct: 1368 SKPSPPSEPVQLLEHGPTLEEAPAMLDKPDIVYVVEGQPASVTVTFNHVEAQVVWRSCRG 1427
Query: 390 QYFVASMEFAVAQFNEDNMEEYTHRLLEVQR 420
A V + ++ + ++Y R+ V R
Sbjct: 1428 ALLEA--RAGVYELSQPDDDQYCLRICRVSR 1456
>gi|47551356 hypothetical protein LOC408029 [Homo sapiens]
Length = 209
Score = 31.6 bits (70), Expect = 1.9
Identities = 15/40 (37%), Positives = 21/40 (52%), Gaps = 1/40 (2%)
Query: 78 SPVPTSPRVASAGLACFGGGGSGEEASERTLWKGSVSTSC 117
SP P +AG C GG+GE+ E + +GS +SC
Sbjct: 148 SPAAEGPAATAAGAVCLPAGGAGEQEKE-PVSRGSSRSSC 186
>gi|47524184 hypothetical protein LOC29798 [Homo sapiens]
Length = 203
Score = 31.6 bits (70), Expect = 1.9
Identities = 15/40 (37%), Positives = 21/40 (52%), Gaps = 1/40 (2%)
Query: 78 SPVPTSPRVASAGLACFGGGGSGEEASERTLWKGSVSTSC 117
SP P +AG C GG+GE+ E + +GS +SC
Sbjct: 142 SPAAEGPAATAAGAVCLPAGGAGEQEKE-PVSRGSSRSSC 180
>gi|23111062 splicing factor, arginine/serine-rich 8 [Homo sapiens]
Length = 951
Score = 31.6 bits (70), Expect = 1.9
Identities = 15/28 (53%), Positives = 18/28 (64%)
Query: 164 ASSLRPQVARQEGGTKEAGPGGAGGRSS 191
AS R + R+ G +EAGPGGAGG S
Sbjct: 4 ASGGRAKPERKSGAKEEAGPGGAGGGGS 31
>gi|205361109 multiple C2 domains, transmembrane 1 isoform L [Homo
sapiens]
Length = 999
Score = 31.2 bits (69), Expect = 2.5
Identities = 36/143 (25%), Positives = 49/143 (34%), Gaps = 15/143 (10%)
Query: 48 WKIPSLRGQRSRGTLQKGVKGGRVNSDTDDSPVPTSPRVASAGLACFGGGGSGEEASERT 107
WK L RS+G G + G T D+P P+ P G A G G+G
Sbjct: 25 WKNLQLGVGRSKGG--GGGRAGGPERRTADTPSPSPPPPVGTGNAPARGSGAGSR----- 77
Query: 108 LWKGSVSTSCLCFQDGLNLSGGTKAKQKKLCRTGNVHLRPQWAAHGPSLVSVQTCLASSL 167
W G + L + Q LC + L P A +++ + L
Sbjct: 78 -WSGFKKRKQV-------LDRVFSSSQPNLCCSSPEPLEPGGAGRAEQGSTLRRRIREHL 129
Query: 168 RPQVARQEGGTKEAGPGGAGGRS 190
P V + AG GGRS
Sbjct: 130 LPAVKGPAAASGAAGGTPPGGRS 152
>gi|169210256 PREDICTED: hypothetical protein [Homo sapiens]
Length = 447
Score = 30.8 bits (68), Expect = 3.3
Identities = 33/112 (29%), Positives = 42/112 (37%), Gaps = 15/112 (13%)
Query: 76 DDSPVPTSPRVASAGLACFGGGGSGEEASE-RTLWKGSVSTSCLCFQDGLNLSGGTKAKQ 134
D P+PT SAGLA G G GE A R S +S + +Q
Sbjct: 271 DPIPLPTRAPRTSAGLAGVGSGAPGEPAEPGRARAPRSAPSS-------------REPRQ 317
Query: 135 KKLCRTGNVHLRPQWAAHGPSLVSVQTCLASSLRPQVARQEGGTKEAGPGGA 186
K R G+ A GP + Q S P+ +GG +EA P A
Sbjct: 318 TKR-RVGSRARAGAGAVTGPCPAAAQGARGSWPSPRCLPSDGGAREAPPTSA 368
>gi|45439359 triple functional domain (PTPRF interacting) [Homo
sapiens]
Length = 3097
Score = 30.8 bits (68), Expect = 3.3
Identities = 23/97 (23%), Positives = 37/97 (38%), Gaps = 14/97 (14%)
Query: 108 LWKGSVSTSCLCFQDGLNLSGGTKAKQKKLCRTGNV-----------HLRPQWAAHGPSL 156
L+K S+ SCLC ++ + K RTG+V +R W +
Sbjct: 2213 LFKNSIKVSCLCLEENVE---NDPCKFALTSRTGDVVETFILHSSSPSVRQTWIHEINQI 2269
Query: 157 VSVQTCLASSLRPQVARQEGGTKEAGPGGAGGRSSTG 193
+ Q ++L + Q + G GG+GG G
Sbjct: 2270 LENQRNFLNALTSPIEYQRNHSGGGGGGGSGGSGGGG 2306
>gi|6274552 signal transducer and activator of transcription 1
isoform alpha [Homo sapiens]
Length = 750
Score = 30.4 bits (67), Expect = 4.3
Identities = 13/48 (27%), Positives = 29/48 (60%), Gaps = 1/48 (2%)
Query: 265 LMKTVLLAKLNECSSLDSERIEWAINQEGASLPGEP-ANITELRNWLT 311
+++ + + +L + + ++ E +EW Q+ A + G P A + +L+NW T
Sbjct: 217 IIELLNVTELTQNALINDELVEWKRRQQSACIGGPPNACLDQLQNWFT 264
>gi|21536301 signal transducer and activator of transcription 1
isoform beta [Homo sapiens]
Length = 712
Score = 30.4 bits (67), Expect = 4.3
Identities = 13/48 (27%), Positives = 29/48 (60%), Gaps = 1/48 (2%)
Query: 265 LMKTVLLAKLNECSSLDSERIEWAINQEGASLPGEP-ANITELRNWLT 311
+++ + + +L + + ++ E +EW Q+ A + G P A + +L+NW T
Sbjct: 217 IIELLNVTELTQNALINDELVEWKRRQQSACIGGPPNACLDQLQNWFT 264
>gi|169167808 PREDICTED: hypothetical protein [Homo sapiens]
Length = 195
Score = 30.4 bits (67), Expect = 4.3
Identities = 38/149 (25%), Positives = 50/149 (33%), Gaps = 11/149 (7%)
Query: 54 RGQRSRGTLQKGVKGGRVNSDTD--DSPVPTSPRVASAGLACFGGGGSGEEASERTLWKG 111
+G GT GV R T +S RV + G C GG G G E++ G
Sbjct: 28 QGASRAGTGGSGVLTPRAKGSTSRAESSAARGARVRAPGRTCRGGPGRGYESA-----AG 82
Query: 112 SVSTSCLCFQDGLNLSGGTKAKQKKLCRTGNVHLRPQWAAHGPSLVSVQTCLASSLRPQV 171
+ S G GG A Q LC + +W G +T P+
Sbjct: 83 NSLPSVP--GGGGRDPGGGAASQPGLCGRAGTGEKRKWERPGKETWKPKTRRPRLRAPRA 140
Query: 172 ARQEGGTKEAGPGGA--GGRSSTGLHWQH 198
A + GP G GG T +H
Sbjct: 141 ALLLPRPRTHGPAGGTRGGNLDTDTQKEH 169
>gi|113417039 PREDICTED: hypothetical protein [Homo sapiens]
Length = 195
Score = 30.4 bits (67), Expect = 4.3
Identities = 38/149 (25%), Positives = 50/149 (33%), Gaps = 11/149 (7%)
Query: 54 RGQRSRGTLQKGVKGGRVNSDTD--DSPVPTSPRVASAGLACFGGGGSGEEASERTLWKG 111
+G GT GV R T +S RV + G C GG G G E++ G
Sbjct: 28 QGASRAGTGGSGVLTPRAKGSTSRAESSAARGARVRAPGRTCRGGPGRGYESA-----AG 82
Query: 112 SVSTSCLCFQDGLNLSGGTKAKQKKLCRTGNVHLRPQWAAHGPSLVSVQTCLASSLRPQV 171
+ S G GG A Q LC + +W G +T P+
Sbjct: 83 NSLPSVP--GGGGRDPGGGAASQPGLCGRAGTGEKRKWERPGKETWKPKTRRPRLRAPRA 140
Query: 172 ARQEGGTKEAGPGGA--GGRSSTGLHWQH 198
A + GP G GG T +H
Sbjct: 141 ALLLPRPRTHGPAGGTRGGNLDTDTQKEH 169
>gi|113416520 PREDICTED: hypothetical protein [Homo sapiens]
Length = 195
Score = 30.4 bits (67), Expect = 4.3
Identities = 38/149 (25%), Positives = 50/149 (33%), Gaps = 11/149 (7%)
Query: 54 RGQRSRGTLQKGVKGGRVNSDTD--DSPVPTSPRVASAGLACFGGGGSGEEASERTLWKG 111
+G GT GV R T +S RV + G C GG G G E++ G
Sbjct: 28 QGASRAGTGGSGVLTPRAKGSTSRAESSAARGARVRAPGRTCRGGPGRGYESA-----AG 82
Query: 112 SVSTSCLCFQDGLNLSGGTKAKQKKLCRTGNVHLRPQWAAHGPSLVSVQTCLASSLRPQV 171
+ S G GG A Q LC + +W G +T P+
Sbjct: 83 NSLPSVP--GGGGRDPGGGAASQPGLCGRAGTGEKRKWERPGKETWKPKTRRPRLRAPRA 140
Query: 172 ARQEGGTKEAGPGGA--GGRSSTGLHWQH 198
A + GP G GG T +H
Sbjct: 141 ALLLPRPRTHGPAGGTRGGNLDTDTQKEH 169
>gi|5032281 dystrophin Dp427c isoform [Homo sapiens]
Length = 3677
Score = 30.0 bits (66), Expect = 5.6
Identities = 19/69 (27%), Positives = 38/69 (55%), Gaps = 4/69 (5%)
Query: 383 SKRIRRHQYFVASMEFAVAQFNEDNMEEYTHRL---LEVQRAQQKVSGSHFVHSQNSLHR 439
+K +R+H+ + + + + + +E HRL LE +A+ KV+G+ SL R
Sbjct: 3554 AKLLRQHKGRLEA-RMQILEDHNKQLESQLHRLRQLLEQPQAEAKVNGTTVSSPSTSLQR 3612
Query: 440 LNSSKPVVM 448
+SS+P+++
Sbjct: 3613 SDSSQPMLL 3621
>gi|5032307 dystrophin Dp140c isoform [Homo sapiens]
Length = 1105
Score = 30.0 bits (66), Expect = 5.6
Identities = 19/69 (27%), Positives = 38/69 (55%), Gaps = 4/69 (5%)
Query: 383 SKRIRRHQYFVASMEFAVAQFNEDNMEEYTHRL---LEVQRAQQKVSGSHFVHSQNSLHR 439
+K +R+H+ + + + + + +E HRL LE +A+ KV+G+ SL R
Sbjct: 982 AKLLRQHKGRLEA-RMQILEDHNKQLESQLHRLRQLLEQPQAEAKVNGTTVSSPSTSLQR 1040
Query: 440 LNSSKPVVM 448
+SS+P+++
Sbjct: 1041 SDSSQPMLL 1049
Database: hs.faa
Posted date: Aug 4, 2009 4:42 PM
Number of letters in database: 18,247,518
Number of sequences in database: 37,866
Lambda K H
0.315 0.132 0.407
Gapped
Lambda K H
0.267 0.0410 0.140
Matrix: BLOSUM62
Gap Penalties: Existence: 11, Extension: 1
Number of Hits to DB: 23,914,975
Number of Sequences: 37866
Number of extensions: 1212628
Number of successful extensions: 3856
Number of sequences better than 10.0: 30
Number of HSP's better than 10.0 without gapping: 11
Number of HSP's successfully gapped in prelim test: 55
Number of HSP's that attempted gapping in prelim test: 3818
Number of HSP's gapped (non-prelim): 86
length of query: 537
length of database: 18,247,518
effective HSP length: 107
effective length of query: 430
effective length of database: 14,195,856
effective search space: 6104218080
effective search space used: 6104218080
T: 11
A: 40
X1: 16 ( 7.3 bits)
X2: 38 (14.6 bits)
X3: 64 (24.7 bits)
S1: 41 (21.6 bits)
S2: 64 (29.3 bits)
Search results were obtained with NCBI BLAST and RefSeq entries.
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Guide to the Human Genome
Copyright © 2010 by Stewart Scherer. All rights reserved.