Search of human proteins with 239746082

Search of human proteins with 239746082

BLASTP 2.2.11 [Jun-05-2005]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= gi|239746082 PREDICTED: hypothetical protein XP_002343651 [Homo
sapiens]
         (168 letters)

Database: hs.faa 
           37,866 sequences; 18,247,518 total letters

Searching..................................................done

                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

gi|239751570 PREDICTED: hypothetical protein XP_002347902 [Homo ...   357   2e-99
gi|239746082 PREDICTED: hypothetical protein XP_002343651 [Homo ...   357   2e-99
gi|239757060 PREDICTED: hypothetical protein [Homo sapiens]           356   6e-99
gi|18959210 WIRE protein [Homo sapiens]                                34   0.052
gi|110556636 tankyrase 1-binding protein 1 [Homo sapiens]              33   0.088
gi|81295809 pericentrin [Homo sapiens]                                 32   0.26 
gi|113416171 PREDICTED: hypothetical protein [Homo sapiens]            32   0.33 
gi|118601070 hypothetical protein LOC158724 [Homo sapiens]             32   0.33 
gi|85815829 SH3-domain binding protein 1 [Homo sapiens]                32   0.33 
gi|169184624 PREDICTED: similar to synaptotagmin XV-b [Homo sapi...    31   0.44 
gi|239753349 PREDICTED: hypothetical protein LOC285141 [Homo sap...    31   0.44 
gi|239747917 PREDICTED: hypothetical protein LOC285141 [Homo sap...    31   0.44 
gi|239741811 PREDICTED: hypothetical protein LOC285141 [Homo sap...    31   0.44 
gi|122891870 melanoma inhibitory activity family, member 3 [Homo...    31   0.44 
gi|112363080 microtubule associated serine/threonine kinase 2 [H...    31   0.44 
gi|31881675 synaptotagmin XV isoform a [Homo sapiens]                  31   0.44 
gi|31881667 synaptotagmin XV isoform b [Homo sapiens]                  31   0.44 
gi|239746597 PREDICTED: hypothetical protein XP_002343794 [Homo ...    31   0.57 
gi|118572613 splicing coactivator subunit SRm300 [Homo sapiens]        31   0.57 
gi|169166294 PREDICTED: hypothetical protein [Homo sapiens]            30   0.75 
gi|149999378 inverted formin 2 isoform 2 [Homo sapiens]                30   0.75 
gi|149999380 inverted formin 2 isoform 1 [Homo sapiens]                30   0.75 
gi|239757331 PREDICTED: hypothetical protein [Homo sapiens]            30   0.97 
gi|239751841 PREDICTED: hypothetical protein [Homo sapiens]            30   0.97 
gi|239746332 PREDICTED: hypothetical protein XP_002343733 [Homo ...    30   0.97 
gi|56118221 amyloid beta (A4) precursor protein-binding, family ...    30   0.97 
gi|116256363 transmembrane protease, serine 13 [Homo sapiens]          30   0.97 
gi|239747677 PREDICTED: hypothetical protein [Homo sapiens]            30   1.3  
gi|239741546 PREDICTED: hypothetical protein XP_002342233 [Homo ...    30   1.3  
gi|146134388 YLP motif containing 1 [Homo sapiens]                     30   1.3  

>gi|239751570 PREDICTED: hypothetical protein XP_002347902 [Homo
           sapiens]
          Length = 168

 Score =  357 bits (917), Expect = 2e-99
 Identities = 168/168 (100%), Positives = 168/168 (100%)

Query: 1   MVGNGSFPTVIKALAPCLQWPWSPPRTQTATPTPSYDSNVHRRFPRFRRCIRERRSEGAC 60
           MVGNGSFPTVIKALAPCLQWPWSPPRTQTATPTPSYDSNVHRRFPRFRRCIRERRSEGAC
Sbjct: 1   MVGNGSFPTVIKALAPCLQWPWSPPRTQTATPTPSYDSNVHRRFPRFRRCIRERRSEGAC 60

Query: 61  ENRPSAAVPLVTRGGRAAPGPPSLVRAEATSGSRDAPPHAFVQLGRRCLSRSSAALETLA 120
           ENRPSAAVPLVTRGGRAAPGPPSLVRAEATSGSRDAPPHAFVQLGRRCLSRSSAALETLA
Sbjct: 61  ENRPSAAVPLVTRGGRAAPGPPSLVRAEATSGSRDAPPHAFVQLGRRCLSRSSAALETLA 120

Query: 121 QCHFCTLPSPPPQLSFLNLPIPPQLEACGSSCKPDQGCRPDPQMVEAG 168
           QCHFCTLPSPPPQLSFLNLPIPPQLEACGSSCKPDQGCRPDPQMVEAG
Sbjct: 121 QCHFCTLPSPPPQLSFLNLPIPPQLEACGSSCKPDQGCRPDPQMVEAG 168


>gi|239746082 PREDICTED: hypothetical protein XP_002343651 [Homo
           sapiens]
          Length = 168

 Score =  357 bits (917), Expect = 2e-99
 Identities = 168/168 (100%), Positives = 168/168 (100%)

Query: 1   MVGNGSFPTVIKALAPCLQWPWSPPRTQTATPTPSYDSNVHRRFPRFRRCIRERRSEGAC 60
           MVGNGSFPTVIKALAPCLQWPWSPPRTQTATPTPSYDSNVHRRFPRFRRCIRERRSEGAC
Sbjct: 1   MVGNGSFPTVIKALAPCLQWPWSPPRTQTATPTPSYDSNVHRRFPRFRRCIRERRSEGAC 60

Query: 61  ENRPSAAVPLVTRGGRAAPGPPSLVRAEATSGSRDAPPHAFVQLGRRCLSRSSAALETLA 120
           ENRPSAAVPLVTRGGRAAPGPPSLVRAEATSGSRDAPPHAFVQLGRRCLSRSSAALETLA
Sbjct: 61  ENRPSAAVPLVTRGGRAAPGPPSLVRAEATSGSRDAPPHAFVQLGRRCLSRSSAALETLA 120

Query: 121 QCHFCTLPSPPPQLSFLNLPIPPQLEACGSSCKPDQGCRPDPQMVEAG 168
           QCHFCTLPSPPPQLSFLNLPIPPQLEACGSSCKPDQGCRPDPQMVEAG
Sbjct: 121 QCHFCTLPSPPPQLSFLNLPIPPQLEACGSSCKPDQGCRPDPQMVEAG 168


>gi|239757060 PREDICTED: hypothetical protein [Homo sapiens]
          Length = 168

 Score =  356 bits (913), Expect = 6e-99
 Identities = 167/168 (99%), Positives = 167/168 (99%)

Query: 1   MVGNGSFPTVIKALAPCLQWPWSPPRTQTATPTPSYDSNVHRRFPRFRRCIRERRSEGAC 60
           MVGNGSFPTVIKALAPCLQWPWSPPRTQTATPTPSYDSNVHRRFPRFRRCIRERRSEG C
Sbjct: 1   MVGNGSFPTVIKALAPCLQWPWSPPRTQTATPTPSYDSNVHRRFPRFRRCIRERRSEGVC 60

Query: 61  ENRPSAAVPLVTRGGRAAPGPPSLVRAEATSGSRDAPPHAFVQLGRRCLSRSSAALETLA 120
           ENRPSAAVPLVTRGGRAAPGPPSLVRAEATSGSRDAPPHAFVQLGRRCLSRSSAALETLA
Sbjct: 61  ENRPSAAVPLVTRGGRAAPGPPSLVRAEATSGSRDAPPHAFVQLGRRCLSRSSAALETLA 120

Query: 121 QCHFCTLPSPPPQLSFLNLPIPPQLEACGSSCKPDQGCRPDPQMVEAG 168
           QCHFCTLPSPPPQLSFLNLPIPPQLEACGSSCKPDQGCRPDPQMVEAG
Sbjct: 121 QCHFCTLPSPPPQLSFLNLPIPPQLEACGSSCKPDQGCRPDPQMVEAG 168


>gi|18959210 WIRE protein [Homo sapiens]
          Length = 440

 Score = 34.3 bits (77), Expect = 0.052
 Identities = 24/80 (30%), Positives = 35/80 (43%), Gaps = 8/80 (10%)

Query: 23  SPPRTQTATPTPSYDSNVHRRFPRFRRCIRE----RRSEGACENRPSAAVPLVTRGGRAA 78
           S P  ++A   P   +++HR+ P   R +        S     NRP          G A 
Sbjct: 266 SSPTNESAPELPQRHNSLHRKTPGPVRGLAPPPPTSASPSLLSNRPPPPARDPPSRGAAP 325

Query: 79  PGPPSLVRAEATSGSRDAPP 98
           P PP ++R    +G+RDAPP
Sbjct: 326 PPPPPVIR----NGARDAPP 341


>gi|110556636 tankyrase 1-binding protein 1 [Homo sapiens]
          Length = 1729

 Score = 33.5 bits (75), Expect = 0.088
 Identities = 30/99 (30%), Positives = 40/99 (40%), Gaps = 19/99 (19%)

Query: 64  PSAAVPLVTRGGRAAPGPPSLVRAEATSGSRDAPPHAFVQLGRRCLSRSSAALETLAQCH 123
           PS+  P    GG A+PG P    AEA SGS    PH                 +  + CH
Sbjct: 273 PSSPAPSSENGGPASPGLP----AEA-SGSGPGSPHLHPP-------------DKSSPCH 314

Query: 124 FCTLPSPPPQLSFLNLPIPPQLEACGSSCKPDQGCRPDP 162
              L +  P+ S  + P P    +  S+  PD+G R  P
Sbjct: 315 SQLLEAQTPEASQAS-PCPAVTPSAPSAALPDEGSRHTP 352


>gi|81295809 pericentrin [Homo sapiens]
          Length = 3336

 Score = 32.0 bits (71), Expect = 0.26
 Identities = 27/88 (30%), Positives = 34/88 (38%), Gaps = 17/88 (19%)

Query: 16   PCLQWPWSPPRTQTATPTPSYDSNVHRRFPRFRRCIRERRSEGACENRPSAAVPLVTRGG 75
            P  + P SPPRT+ + PT    S  H R P                 R  AA      GG
Sbjct: 3235 PRARQPQSPPRTRESPPTRDVPSG-HTRDP--------------ARGRRLAAAASPHSGG 3279

Query: 76   RAAPGPPSLVRAEATSGSRDAPPHAFVQ 103
            RA P P S  R E +  +   P H+  +
Sbjct: 3280 RATPSPNS--RLERSLTASQDPEHSLTE 3305


>gi|113416171 PREDICTED: hypothetical protein [Homo sapiens]
          Length = 265

 Score = 31.6 bits (70), Expect = 0.33
 Identities = 25/87 (28%), Positives = 32/87 (36%), Gaps = 8/87 (9%)

Query: 83  SLVRAEATSGSRDAPPHAFVQLGRRCLSRSSAALETLAQCHFCTLPSP--------PPQL 134
           S+  A  TS    AP  A   LG     R+SA     A C     P+P        P + 
Sbjct: 53  SVSTATVTSSGASAPGSADPTLGSTAARRASAPWACPAGCCRANAPAPARNPRRKEPRRQ 112

Query: 135 SFLNLPIPPQLEACGSSCKPDQGCRPD 161
           S           AC S C+P + C P+
Sbjct: 113 SRATGKSARTRRACASPCRPGRHCGPE 139


>gi|118601070 hypothetical protein LOC158724 [Homo sapiens]
          Length = 791

 Score = 31.6 bits (70), Expect = 0.33
 Identities = 29/102 (28%), Positives = 40/102 (39%), Gaps = 21/102 (20%)

Query: 16  PCLQWPWSPPRTQTATPTPSYD-----SNVHRRFPRFRRCIRER------------RSEG 58
           PCLQ    PP TQ + P P +      S++H + P+ RR    R            RSE 
Sbjct: 466 PCLQ----PPETQVSHPHPEHPKTRRRSSLHSQPPKTRRTSSLRSEPPKTRRTSSLRSEP 521

Query: 59  ACENRPSAAVPLVTRGGRAAPGPPSLVRAEATSGSRDAPPHA 100
               R S+  P   +  R +   P L ++   S     PP A
Sbjct: 522 PKTRRTSSLGPEPPKTRRVSSLRPELPKSRRVSSLHPEPPKA 563


>gi|85815829 SH3-domain binding protein 1 [Homo sapiens]
          Length = 701

 Score = 31.6 bits (70), Expect = 0.33
 Identities = 37/139 (26%), Positives = 52/139 (37%), Gaps = 26/139 (18%)

Query: 8   PTVIKALAPCLQWPWSPPRTQTATPTPSYDSNVHRRFPRFRRCIRE--RRSEGACENRPS 65
           P    A AP L    +  RT++  P       V R  P     + +  RR++     RP+
Sbjct: 515 PAPAPAPAPALASAATKERTESEVPPRPASPKVTRSPPETAAPVEDMARRTKRPAPARPT 574

Query: 66  AAVPLVTRGGRAAPGPPSLVRAEATSGSRDAPPHAFVQLGRRCLSRSSAALETLAQCHFC 125
              P V+ G R++P  P L     + G+  A P       RR +  S  A          
Sbjct: 575 MPPPQVS-GSRSSPPAPPLPPGSGSPGTPQALP-------RRLVGSSLRA---------- 616

Query: 126 TLPSPPPQLSFLNLPIPPQ 144
             P+ PP L     P PPQ
Sbjct: 617 --PTVPPPLP----PTPPQ 629


>gi|169184624 PREDICTED: similar to synaptotagmin XV-b [Homo
           sapiens]
          Length = 267

 Score = 31.2 bits (69), Expect = 0.44
 Identities = 15/30 (50%), Positives = 18/30 (60%), Gaps = 2/30 (6%)

Query: 79  PGPPSLVRAEATSGSRDAP--PHAFVQLGR 106
           PG P++    A+SG RD P  PHA  QL R
Sbjct: 238 PGTPAMATTAASSGQRDRPCQPHARTQLSR 267


>gi|239753349 PREDICTED: hypothetical protein LOC285141 [Homo
           sapiens]
          Length = 327

 Score = 31.2 bits (69), Expect = 0.44
 Identities = 19/58 (32%), Positives = 26/58 (44%)

Query: 76  RAAPGPPSLVRAEATSGSRDAPPHAFVQLGRRCLSRSSAALETLAQCHFCTLPSPPPQ 133
           R+  G PS  RA + +GSR  P     + GR+ +  S A          C+L  PP Q
Sbjct: 38  RSRLGAPSSARAASRAGSRCVPFGWSAEEGRQLVRHSEATTGLPLPSPVCSLTQPPQQ 95


>gi|239747917 PREDICTED: hypothetical protein LOC285141 [Homo
           sapiens]
          Length = 327

 Score = 31.2 bits (69), Expect = 0.44
 Identities = 19/58 (32%), Positives = 26/58 (44%)

Query: 76  RAAPGPPSLVRAEATSGSRDAPPHAFVQLGRRCLSRSSAALETLAQCHFCTLPSPPPQ 133
           R+  G PS  RA + +GSR  P     + GR+ +  S A          C+L  PP Q
Sbjct: 38  RSRLGAPSSARAASRAGSRCVPFGWSAEEGRQLVRHSEATTGLPLPSPVCSLTQPPQQ 95


>gi|239741811 PREDICTED: hypothetical protein LOC285141 [Homo
           sapiens]
          Length = 327

 Score = 31.2 bits (69), Expect = 0.44
 Identities = 19/58 (32%), Positives = 26/58 (44%)

Query: 76  RAAPGPPSLVRAEATSGSRDAPPHAFVQLGRRCLSRSSAALETLAQCHFCTLPSPPPQ 133
           R+  G PS  RA + +GSR  P     + GR+ +  S A          C+L  PP Q
Sbjct: 38  RSRLGAPSSARAASRAGSRCVPFGWSAEEGRQLVRHSEATTGLPLPSPVCSLTQPPQQ 95


>gi|122891870 melanoma inhibitory activity family, member 3 [Homo
            sapiens]
          Length = 1907

 Score = 31.2 bits (69), Expect = 0.44
 Identities = 18/45 (40%), Positives = 22/45 (48%), Gaps = 1/45 (2%)

Query: 64   PSAAVPLVTRGGRAAPGPPSLVRAEATSGSRDAPPHAFVQLGRRC 108
            P   +P  T G +  P PP+ VR    SGSRD PP A     + C
Sbjct: 1856 PGTRLPPPTHGPQEYPPPPA-VRDLLPSGSRDEPPPASQSTSQDC 1899


>gi|112363080 microtubule associated serine/threonine kinase 2 [Homo
           sapiens]
          Length = 1798

 Score = 31.2 bits (69), Expect = 0.44
 Identities = 28/110 (25%), Positives = 45/110 (40%), Gaps = 29/110 (26%)

Query: 19  QWPWSPPRTQTATP---TPSYDSNV-------HRRFPRFRRCIRERRSEGACENRPSAAV 68
           Q P   PR+++ +P     S+DS +         RFP+    + ER +E    N P + +
Sbjct: 289 QSPAMRPRSRSLSPGRSPVSFDSEIIMMNHVYKERFPKATAQMEERLAEFISSNTPDSVL 348

Query: 69  PLVTRGGRAAPGPPSLVRAEATSGSRDAPPHAFVQLGRRCLSRSSAALET 118
           PL       A G  S +             H  +++ R CL +S + L T
Sbjct: 349 PL-------ADGALSFIH------------HQVIEMARDCLDKSRSGLIT 379


>gi|31881675 synaptotagmin XV isoform a [Homo sapiens]
          Length = 421

 Score = 31.2 bits (69), Expect = 0.44
 Identities = 15/30 (50%), Positives = 18/30 (60%), Gaps = 2/30 (6%)

Query: 79  PGPPSLVRAEATSGSRDAP--PHAFVQLGR 106
           PG P++    A+SG RD P  PHA  QL R
Sbjct: 42  PGTPAMATTAASSGQRDRPCQPHARTQLSR 71


>gi|31881667 synaptotagmin XV isoform b [Homo sapiens]
          Length = 390

 Score = 31.2 bits (69), Expect = 0.44
 Identities = 15/30 (50%), Positives = 18/30 (60%), Gaps = 2/30 (6%)

Query: 79  PGPPSLVRAEATSGSRDAP--PHAFVQLGR 106
           PG P++    A+SG RD P  PHA  QL R
Sbjct: 42  PGTPAMATTAASSGQRDRPCQPHARTQLSR 71


>gi|239746597 PREDICTED: hypothetical protein XP_002343794 [Homo
           sapiens]
          Length = 213

 Score = 30.8 bits (68), Expect = 0.57
 Identities = 19/63 (30%), Positives = 31/63 (49%), Gaps = 3/63 (4%)

Query: 102 VQLGRRCLSR-SSAALETLAQCHFCTLPSPPPQLSFLNLPIPPQLEACGSSCKPDQGCRP 160
           + L + C  R  S  ++ L +   C+  +PP  + +  L +P    A G + KP +G RP
Sbjct: 26  LHLSQVCSDRPQSVCIQVLIKTVCCS--TPPRVVCWRALRVPTNARALGLALKPARGFRP 83

Query: 161 DPQ 163
            PQ
Sbjct: 84  RPQ 86


>gi|118572613 splicing coactivator subunit SRm300 [Homo sapiens]
          Length = 2752

 Score = 30.8 bits (68), Expect = 0.57
 Identities = 30/120 (25%), Positives = 41/120 (34%), Gaps = 19/120 (15%)

Query: 21   PWSPPRTQTATPTPSYDSNVHRRFPRFRRCIRERRSEGACENRPSAAVPLVTRGGRAAPG 80
            P +  R+++ TP P+       R P   R     RS  A   R  +  P   RG R+   
Sbjct: 2012 PVTRRRSRSRTP-PAIRRRSRSRTPLLPRKRSRSRSPLAIRRRSRSRTPRTARGKRSLTR 2070

Query: 81   PPSLVRAEATSGSRD------------------APPHAFVQLGRRCLSRSSAALETLAQC 122
             P  +R  + SGS                     PP A       C SR S +   L +C
Sbjct: 2071 SPPAIRRRSASGSSSDRSRSATPPATRNHSGSRTPPVALNSSRMSCFSRPSMSPTPLDRC 2130


>gi|169166294 PREDICTED: hypothetical protein [Homo sapiens]
          Length = 265

 Score = 30.4 bits (67), Expect = 0.75
 Identities = 25/87 (28%), Positives = 32/87 (36%), Gaps = 8/87 (9%)

Query: 83  SLVRAEATSGSRDAPPHAFVQLGRRCLSRSSAALETLAQCHFCTLPSP--------PPQL 134
           S+  A  TS    AP  A   LG     R+SA     A C     P+P        P + 
Sbjct: 53  SVSTATVTSFGASAPGSADPTLGSTAARRASAPWACPAGCCRANAPAPARNPRRKEPRRQ 112

Query: 135 SFLNLPIPPQLEACGSSCKPDQGCRPD 161
           S           AC S C+P + C P+
Sbjct: 113 SRATGKSARTRRACASPCRPGRHCGPE 139


>gi|149999378 inverted formin 2 isoform 2 [Homo sapiens]
          Length = 1240

 Score = 30.4 bits (67), Expect = 0.75
 Identities = 33/130 (25%), Positives = 39/130 (30%), Gaps = 17/130 (13%)

Query: 29  TATPTPSYDSNV-----------HRRFPRFRRCIRERRSEGACENRPSAAVPLVTRGGRA 77
           T TP PS +              H +     +  + R  E      P    P +  G  A
Sbjct: 376 TTTPKPSVEGQQPAAAAACEPVDHAQSESILKVSQPRALEQQASTPPPPPPPPLLPGSSA 435

Query: 78  APGPPS----LVRAEATSGSRDAPPHAFVQLGRRCLSRSSAALETLAQCHFCTLPSPPPQ 133
            P PP     L    A +     PP     LG                C F  LP PPP 
Sbjct: 436 EPPPPPPPPPLPSVGAKALPTAPPPPPLPGLGAMAPPAPPLPPPLPGSCEF--LPPPPPP 493

Query: 134 LSFLNLPIPP 143
           L  L  P PP
Sbjct: 494 LPGLGCPPPP 503


>gi|149999380 inverted formin 2 isoform 1 [Homo sapiens]
          Length = 1249

 Score = 30.4 bits (67), Expect = 0.75
 Identities = 33/130 (25%), Positives = 39/130 (30%), Gaps = 17/130 (13%)

Query: 29  TATPTPSYDSNV-----------HRRFPRFRRCIRERRSEGACENRPSAAVPLVTRGGRA 77
           T TP PS +              H +     +  + R  E      P    P +  G  A
Sbjct: 376 TTTPKPSVEGQQPAAAAACEPVDHAQSESILKVSQPRALEQQASTPPPPPPPPLLPGSSA 435

Query: 78  APGPPS----LVRAEATSGSRDAPPHAFVQLGRRCLSRSSAALETLAQCHFCTLPSPPPQ 133
            P PP     L    A +     PP     LG                C F  LP PPP 
Sbjct: 436 EPPPPPPPPPLPSVGAKALPTAPPPPPLPGLGAMAPPAPPLPPPLPGSCEF--LPPPPPP 493

Query: 134 LSFLNLPIPP 143
           L  L  P PP
Sbjct: 494 LPGLGCPPPP 503


>gi|239757331 PREDICTED: hypothetical protein [Homo sapiens]
          Length = 231

 Score = 30.0 bits (66), Expect = 0.97
 Identities = 32/124 (25%), Positives = 47/124 (37%), Gaps = 22/124 (17%)

Query: 18  LQWPWSPPRTQTATPTPSYD--------SNVHRRFPRFRRCIRERRSEGACENRPSAAVP 69
           L WP  PPR  +   +            S    R  R  R +R  R      +RP ++ P
Sbjct: 15  LSWPPPPPRASSLPRSLPRSPRLCSRSRSRSRSRSRRRSRSLRWLRRRSRSRSRPFSSGP 74

Query: 70  LVTRGGRAAPGPPSLVRAEATSGSRDAPP--------------HAFVQLGRRCLSRSSAA 115
               G  +  GP S   + A+ GS  +PP               + ++L RR  SRS + 
Sbjct: 75  SGPSGPSSPGGPSSGGASPASEGSAMSPPPPRSSSLRSRSRRARSRLRLLRRFRSRSLSL 134

Query: 116 LETL 119
           L +L
Sbjct: 135 LRSL 138


>gi|239751841 PREDICTED: hypothetical protein [Homo sapiens]
          Length = 231

 Score = 30.0 bits (66), Expect = 0.97
 Identities = 32/124 (25%), Positives = 47/124 (37%), Gaps = 22/124 (17%)

Query: 18  LQWPWSPPRTQTATPTPSYD--------SNVHRRFPRFRRCIRERRSEGACENRPSAAVP 69
           L WP  PPR  +   +            S    R  R  R +R  R      +RP ++ P
Sbjct: 15  LSWPPPPPRASSLPRSLPRSPRLCSRSRSRSRSRSRRRSRSLRWLRRRSRSRSRPFSSGP 74

Query: 70  LVTRGGRAAPGPPSLVRAEATSGSRDAPP--------------HAFVQLGRRCLSRSSAA 115
               G  +  GP S   + A+ GS  +PP               + ++L RR  SRS + 
Sbjct: 75  SGPSGPSSPGGPSSGGASPASEGSAMSPPPPRSSSLRSRSRRARSRLRLLRRFRSRSLSL 134

Query: 116 LETL 119
           L +L
Sbjct: 135 LRSL 138


>gi|239746332 PREDICTED: hypothetical protein XP_002343733 [Homo
           sapiens]
          Length = 231

 Score = 30.0 bits (66), Expect = 0.97
 Identities = 32/124 (25%), Positives = 47/124 (37%), Gaps = 22/124 (17%)

Query: 18  LQWPWSPPRTQTATPTPSYD--------SNVHRRFPRFRRCIRERRSEGACENRPSAAVP 69
           L WP  PPR  +   +            S    R  R  R +R  R      +RP ++ P
Sbjct: 15  LSWPPPPPRASSLPRSLPRSPRLCSRSRSRSRSRSRRRSRSLRWLRRRSRSRSRPFSSGP 74

Query: 70  LVTRGGRAAPGPPSLVRAEATSGSRDAPP--------------HAFVQLGRRCLSRSSAA 115
               G  +  GP S   + A+ GS  +PP               + ++L RR  SRS + 
Sbjct: 75  SGPSGPSSPGGPSSGGASPASEGSAMSPPPPRSSSLRSRSRRARSRLRLLRRFRSRSLSL 134

Query: 116 LETL 119
           L +L
Sbjct: 135 LRSL 138


>gi|56118221 amyloid beta (A4) precursor protein-binding, family B,
           member 1 interacting protein [Homo sapiens]
          Length = 666

 Score = 30.0 bits (66), Expect = 0.97
 Identities = 36/138 (26%), Positives = 48/138 (34%), Gaps = 16/138 (11%)

Query: 11  IKALAPCLQWPWSPPRTQTATPTPSYDSNVHRRFPRFRRCIRERRS----EGACENRPSA 66
           + A AP    P + P+T T  P        H      +   R   +    + A  N    
Sbjct: 446 VNAAAPAQ--PSTGPKTGTTQPNGQIPQATHSVSAVLQEAQRHAETSKDKKPALGNHHDP 503

Query: 67  AVPLVTRGGRAA-PGPPSLVRAEATSGSRDAPPHAFVQLGRRCLSRSSAALETLAQCHFC 125
           AVP      +++ P PP + R+  TSGS   P  A    G    +             F 
Sbjct: 504 AVPRAPHAPKSSLPPPPPVRRSSDTSGSPATPLKAKGTGGGGLPAPPD---------DFL 554

Query: 126 TLPSPPPQLSFLNLPIPP 143
             P PPP L    LP PP
Sbjct: 555 PPPPPPPPLDDPELPPPP 572


>gi|116256363 transmembrane protease, serine 13 [Homo sapiens]
          Length = 567

 Score = 30.0 bits (66), Expect = 0.97
 Identities = 19/52 (36%), Positives = 23/52 (44%)

Query: 64  PSAAVPLVTRGGRAAPGPPSLVRAEATSGSRDAPPHAFVQLGRRCLSRSSAA 115
           P+ A P  T  GRA+PG  S  +A     S      A   L R    RSS+A
Sbjct: 56  PAQASPAGTPPGRASPGRASPAQASPAQASPARASPALASLSRSSSGRSSSA 107


>gi|239747677 PREDICTED: hypothetical protein [Homo sapiens]
          Length = 262

 Score = 29.6 bits (65), Expect = 1.3
 Identities = 34/135 (25%), Positives = 50/135 (37%), Gaps = 19/135 (14%)

Query: 17  CLQWPWSPPRTQTATPTPSYDSNVHRRFPRFRR-----CIRERRSEGACENRPSAAVPLV 71
           C+  P +  R+    P  ++ S +  R  R  R     C R R +       P +  P  
Sbjct: 47  CVPGPSNARRSFAPFPLENWISYLRGRGSRSERGRECACARARLARA---RSPHSMSPTH 103

Query: 72  TRGGRAAPGPPSLVRAEATSGSRDAPP------HAFVQLGRRCLSRSSAALETLAQCHFC 125
             G  +AP PP    A+  +G    PP       A +   RRC S   +      +CH  
Sbjct: 104 FHGA-SAPPPPPPRLAQPRAGPAPPPPGPPSLRRAPINQPRRCQSSGGSP----RRCHCS 158

Query: 126 TLPSPPPQLSFLNLP 140
           ++P  P   S L  P
Sbjct: 159 SVPGAPAPASQLPRP 173


>gi|239741546 PREDICTED: hypothetical protein XP_002342233 [Homo
           sapiens]
          Length = 262

 Score = 29.6 bits (65), Expect = 1.3
 Identities = 34/135 (25%), Positives = 50/135 (37%), Gaps = 19/135 (14%)

Query: 17  CLQWPWSPPRTQTATPTPSYDSNVHRRFPRFRR-----CIRERRSEGACENRPSAAVPLV 71
           C+  P +  R+    P  ++ S +  R  R  R     C R R +       P +  P  
Sbjct: 47  CVPGPSNARRSFAPFPLENWISYLRGRGSRSERGRECACARARLARA---RSPHSMSPTH 103

Query: 72  TRGGRAAPGPPSLVRAEATSGSRDAPP------HAFVQLGRRCLSRSSAALETLAQCHFC 125
             G  +AP PP    A+  +G    PP       A +   RRC S   +      +CH  
Sbjct: 104 FHGA-SAPPPPPPRLAQPRAGPAPPPPGPPSLRRAPINQPRRCQSSGGSP----RRCHCS 158

Query: 126 TLPSPPPQLSFLNLP 140
           ++P  P   S L  P
Sbjct: 159 SVPGAPAPASQLPRP 173


>gi|146134388 YLP motif containing 1 [Homo sapiens]
          Length = 2146

 Score = 29.6 bits (65), Expect = 1.3
 Identities = 25/99 (25%), Positives = 38/99 (38%), Gaps = 13/99 (13%)

Query: 11  IKALAPCLQWPWSPPRTQTATPTPSYDSNVHRRFPRFRRCIRERRSEGACENRPSAAVP- 69
           +++  P  Q     P +++A P  S+ S+            +      A  ++P  AV  
Sbjct: 689 LQSAGPSEQVNSKAPLSKSALPYSSFSSD------------QGLGESSAAPSQPITAVKD 736

Query: 70  LVTRGGRAAPGPPSLVRAEATSGSRDAPPHAFVQLGRRC 108
           +  R G   P PP     E+  G R   P  F  LG RC
Sbjct: 737 MPVRSGGLLPDPPRSSYLESPRGPRFDGPRRFEDLGSRC 775


  Database: hs.faa
    Posted date:  Aug 4, 2009  4:42 PM
  Number of letters in database: 18,247,518
  Number of sequences in database:  37,866
  
Lambda     K      H
   0.320    0.134    0.442 

Gapped
Lambda     K      H
   0.267   0.0410    0.140 


Matrix: BLOSUM62
Gap Penalties: Existence: 11, Extension: 1
Number of Hits to DB: 9,030,694
Number of Sequences: 37866
Number of extensions: 476236
Number of successful extensions: 2506
Number of sequences better than 10.0: 30
Number of HSP's better than 10.0 without gapping: 26
Number of HSP's successfully gapped in prelim test: 106
Number of HSP's that attempted gapping in prelim test: 2406
Number of HSP's gapped (non-prelim): 189
length of query: 168
length of database: 18,247,518
effective HSP length: 95
effective length of query: 73
effective length of database: 14,650,248
effective search space: 1069468104
effective search space used: 1069468104
T: 11
A: 40
X1: 16 ( 7.4 bits)
X2: 38 (14.6 bits)
X3: 64 (24.7 bits)
S1: 41 (21.8 bits)
S2: 58 (26.9 bits)
Search results were obtained with NCBI BLAST and RefSeq entries.