LOC100288571 18593

Name: LOC100288571	Sequence: fasta or formatted (404aa)		NCBI GI: 239745895
Description: PREDICTED: hypothetical protein XP_002343612		Not currently referenced in the text
Composition: Amino acid Percentage Count Longest homopolymer A alanine 11.1 45 2 C cysteine 2.0 8 2 D aspartate 2.0 8 2 E glutamate 6.9 28 2 F phenylalanine 1.7 7 1 G glycine 13.4 54 3 H histidine 5.4 22 2 I isoleucine 2.0 8 1 K lysine 4.5 18 2 L leucine 5.4 22 3 M methionine 1.0 4 1 N asparagine 2.0 8 1 P proline 9.9 40 2 Q glutamine 3.2 13 1 R arginine 9.9 40 5 S serine 8.2 33 2 T threonine 5.7 23 3 V valine 3.0 12 1 W tryptophan 1.2 5 1 Y tyrosine 1.5 6 1			Comparative genomics: Search single species RefSeq proteins at NCBI H. sapiens M. musculus D. rerio C. intestinalis S. purpuratus D. melanogaster C. elegans A. thaliana S. cerevisiae E. coli W3110 A. pernix K1 Search summary Figure data Additional searches of RefSeq proteins at NCBI All Eukaryotes Bacteria Archaea Viruses Primates Mammals Vertebrates
Related human proteins: Protein Relative score Description Self-match 1.000 PREDICTED: hypothetical protein XP_002343612 LOC100290679 1.000 PREDICTED: hypothetical protein XP_002347834 LOC100293107 0.925 PREDICTED: hypothetical protein COL1A2 0.029 alpha 2 type I collagen TCF3 0.028 transcription factor 3 isoform E47 TCF3 0.027 transcription factor 3 isoform E12 FLG 0.025 filaggrin COL5A1 0.025 alpha 1 type V collagen preproprotein LOC100289763 0.025 PREDICTED: hypothetical protein XP_002347867 LOC100289681 0.025 PREDICTED: hypothetical protein XP_002343623 LOC100292172 0.025 PREDICTED: hypothetical protein COL1A1 0.024 alpha 1 type I collagen preproprotein EGLN1 0.024 egl nine homolog 1 COL3A1 0.024 collagen type III alpha 1 preproprotein COL2A1 0.023 collagen, type II, alpha 1 isoform 1 precursor [Hom... COL2A1 0.023 collagen, type II, alpha 1 isoform 2 precursor [Hom... TBX2 0.023 T-box 2 LOC100292370 0.022 PREDICTED: hypothetical protein COL5A2 0.022 alpha 2 type V collagen preproprotein COL22A1 0.022 collagen, type XXII, alpha 1 ITPKC 0.021 inositol 1,4,5-trisphosphate 3-kinase C FLJ37078 0.021 hypothetical protein LOC222183 FLJ10357 0.021 hypothetical protein LOC55701 LOC100131774 0.019 PREDICTED: hypothetical protein COL11A2 0.019 collagen, type XI, alpha 2 isoform 2 preproprotein ... COL11A2 0.019 collagen, type XI, alpha 2 isoform 3 preproprotein ... COL11A2 0.019 collagen, type XI, alpha 2 isoform 1 preproprotein ... HOXD4 0.018 homeobox D4 LOC100290812 0.018 PREDICTED: hypothetical protein XP_002347678 LOC100288205 0.018 PREDICTED: hypothetical protein XP_002343496 Human BLASTP results (used to prepare the table)

Gene descriptions are from NCBI RefSeq. Search results were obtained with NCBI BLAST and RefSeq entries. When identical proteins are present, the self-match may not be listed first in BLASTP output. In such cases, the table above has been reordered to place it first.

See About the Figures for the scoring system used in the figure above right. The same scoring system was used in the table of BLASTP results.