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Search of human proteins with 239745125
BLASTP 2.2.11 [Jun-05-2005]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= gi|239745125 PREDICTED: similar to WAS protein homolog
associated with actin, golgi membranes and microtubules [Homo sapiens]
(130 letters)
Database: hs.faa
37,866 sequences; 18,247,518 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
gi|239745125 PREDICTED: similar to WAS protein homolog associate... 252 5e-68
gi|169208753 PREDICTED: similar to WHDC1-like protein 1 [Homo sa... 250 2e-67
gi|239745156 PREDICTED: similar to WAS protein homolog associate... 250 2e-67
gi|169208040 PREDICTED: similar to WAS protein homolog associate... 215 7e-57
gi|122937271 WAS protein homolog associated with actin, golgi me... 204 1e-53
gi|195947369 junction-mediating and regulatory protein [Homo sap... 110 3e-25
gi|22538387 A-kinase anchor protein 9 isoform 2 [Homo sapiens] 35 0.022
gi|22538393 A-kinase anchor protein 9 isoform 3 [Homo sapiens] 35 0.022
gi|16418355 cAMP responsive element binding protein 3-like 1 [Ho... 34 0.029
gi|40789306 zinc finger protein 365 isoform C [Homo sapiens] 34 0.037
gi|40789310 zinc finger protein 365 isoform B [Homo sapiens] 34 0.037
gi|148596972 zinc finger protein 365 isoform A [Homo sapiens] 34 0.037
gi|20270377 DPY30 domain containing 1 [Homo sapiens] 33 0.064
gi|146133848 golgi autoantigen, golgin subfamily a, 6 [Homo sapi... 32 0.11
gi|28269672 serologically defined colon cancer antigen 8 [Homo s... 32 0.11
gi|24308171 zinc finger protein 280C [Homo sapiens] 32 0.14
gi|94538359 golgi autoantigen, golgin subfamily a, 6B [Homo sapi... 32 0.14
gi|31563507 GRIP and coiled-coil domain-containing 2 [Homo sapiens] 31 0.24
gi|223634475 golgi autoantigen, golgin subfamily a, 6D [Homo sap... 31 0.24
gi|239755047 PREDICTED: ankyrin repeat domain 18A [Homo sapiens] 31 0.24
gi|239749578 PREDICTED: ankyrin repeat domain 18A [Homo sapiens] 31 0.24
gi|51472437 PREDICTED: golgi autoantigen, golgin subfamily a, 6C... 31 0.24
gi|239743724 PREDICTED: ankyrin repeat domain 18A [Homo sapiens] 31 0.24
gi|63053524 ubiquitin specific protease 1 [Homo sapiens] 31 0.24
gi|63053522 ubiquitin specific protease 1 [Homo sapiens] 31 0.24
gi|31543910 ubiquitin specific protease 1 [Homo sapiens] 31 0.24
gi|8922950 meiosis-specific nuclear structural 1 [Homo sapiens] 31 0.24
gi|237649015 EBNA1 binding protein 2 isoform 2 [Homo sapiens] 31 0.32
gi|237649012 EBNA1 binding protein 2 isoform 1 [Homo sapiens] 31 0.32
gi|197313728 pleckstrin homology-like domain, family B, member 2... 31 0.32
>gi|239745125 PREDICTED: similar to WAS protein homolog associated
with actin, golgi membranes and microtubules [Homo
sapiens]
Length = 130
Score = 252 bits (644), Expect = 5e-68
Identities = 130/130 (100%), Positives = 130/130 (100%)
Query: 1 MEASVPKYKKQLPQLGMQKEMEQDVKRFGQAAWATAIPRLEKLKLMLAQETLQLMRAKEL 60
MEASVPKYKKQLPQLGMQKEMEQDVKRFGQAAWATAIPRLEKLKLMLAQETLQLMRAKEL
Sbjct: 1 MEASVPKYKKQLPQLGMQKEMEQDVKRFGQAAWATAIPRLEKLKLMLAQETLQLMRAKEL 60
Query: 61 YLNRKRAEIQGKMEDLPEQEKNINVVDELEMQFYEIQLELYEVKFEILKNEEILLTTQLD 120
YLNRKRAEIQGKMEDLPEQEKNINVVDELEMQFYEIQLELYEVKFEILKNEEILLTTQLD
Sbjct: 61 YLNRKRAEIQGKMEDLPEQEKNINVVDELEMQFYEIQLELYEVKFEILKNEEILLTTQLD 120
Query: 121 SLKRLIKNEI 130
SLKRLIKNEI
Sbjct: 121 SLKRLIKNEI 130
>gi|169208753 PREDICTED: similar to WHDC1-like protein 1 [Homo
sapiens]
Length = 130
Score = 250 bits (639), Expect = 2e-67
Identities = 129/130 (99%), Positives = 130/130 (100%)
Query: 1 MEASVPKYKKQLPQLGMQKEMEQDVKRFGQAAWATAIPRLEKLKLMLAQETLQLMRAKEL 60
MEASVPKYKKQLPQLGMQKEMEQDVKRFGQAAWATAIPRLEKLKLMLAQETLQLMRAKEL
Sbjct: 1 MEASVPKYKKQLPQLGMQKEMEQDVKRFGQAAWATAIPRLEKLKLMLAQETLQLMRAKEL 60
Query: 61 YLNRKRAEIQGKMEDLPEQEKNINVVDELEMQFYEIQLELYEVKFEILKNEEILLTTQLD 120
YLNRKRAEIQGKMEDLPEQEKNINVVDELEMQFYEIQLELYEVKFEILKNEEILLTTQLD
Sbjct: 61 YLNRKRAEIQGKMEDLPEQEKNINVVDELEMQFYEIQLELYEVKFEILKNEEILLTTQLD 120
Query: 121 SLKRLIKNEI 130
SLKRLIK+EI
Sbjct: 121 SLKRLIKDEI 130
>gi|239745156 PREDICTED: similar to WAS protein homolog associated
with actin, golgi membranes and microtubules isoform 2
[Homo sapiens]
Length = 130
Score = 250 bits (639), Expect = 2e-67
Identities = 129/130 (99%), Positives = 130/130 (100%)
Query: 1 MEASVPKYKKQLPQLGMQKEMEQDVKRFGQAAWATAIPRLEKLKLMLAQETLQLMRAKEL 60
MEASVPKYKKQLPQLGMQKEMEQDVKRFGQAAWATAIPRLEKLKLMLAQETLQLMRAKEL
Sbjct: 1 MEASVPKYKKQLPQLGMQKEMEQDVKRFGQAAWATAIPRLEKLKLMLAQETLQLMRAKEL 60
Query: 61 YLNRKRAEIQGKMEDLPEQEKNINVVDELEMQFYEIQLELYEVKFEILKNEEILLTTQLD 120
YLNRKRAEIQGKMEDLPEQEKNINVVDELEMQFYEIQLELYEVKFEILKNEEILLTTQLD
Sbjct: 61 YLNRKRAEIQGKMEDLPEQEKNINVVDELEMQFYEIQLELYEVKFEILKNEEILLTTQLD 120
Query: 121 SLKRLIKNEI 130
SLKRLIK+EI
Sbjct: 121 SLKRLIKDEI 130
>gi|169208040 PREDICTED: similar to WAS protein homolog associated
with actin, golgi membranes and microtubules isoform 1
[Homo sapiens]
Length = 131
Score = 215 bits (548), Expect = 7e-57
Identities = 111/113 (98%), Positives = 112/113 (99%)
Query: 17 MQKEMEQDVKRFGQAAWATAIPRLEKLKLMLAQETLQLMRAKELYLNRKRAEIQGKMEDL 76
MQKEMEQDVKRFGQAAWATAIPRLEKLKLMLAQETLQLMRAKELYLNRKRAEIQGKMEDL
Sbjct: 1 MQKEMEQDVKRFGQAAWATAIPRLEKLKLMLAQETLQLMRAKELYLNRKRAEIQGKMEDL 60
Query: 77 PEQEKNINVVDELEMQFYEIQLELYEVKFEILKNEEILLTTQLDSLKRLIKNE 129
PEQEKNINVVDELEMQFYEIQLELYEVKFEILKNEEILLTTQLDSLKRLIK +
Sbjct: 61 PEQEKNINVVDELEMQFYEIQLELYEVKFEILKNEEILLTTQLDSLKRLIKEK 113
>gi|122937271 WAS protein homolog associated with actin, golgi
membranes and microtubules [Homo sapiens]
Length = 809
Score = 204 bits (520), Expect = 1e-53
Identities = 108/129 (83%), Positives = 117/129 (90%), Gaps = 1/129 (0%)
Query: 2 EASVPKYKKQLPQL-GMQKEMEQDVKRFGQAAWATAIPRLEKLKLMLAQETLQLMRAKEL 60
+ +V +K+ + L GMQKEMEQD KRFGQAAWATAIPRLEKL+LMLA+ETLQLMRAKEL
Sbjct: 297 DITVNYFKETVKALAGMQKEMEQDAKRFGQAAWATAIPRLEKLQLMLARETLQLMRAKEL 356
Query: 61 YLNRKRAEIQGKMEDLPEQEKNINVVDELEMQFYEIQLELYEVKFEILKNEEILLTTQLD 120
LN KRAEIQGKMEDLPEQEKN NVVDELE+QFYEIQLELYEVKFEILKNEEILLTTQLD
Sbjct: 357 CLNHKRAEIQGKMEDLPEQEKNTNVVDELEIQFYEIQLELYEVKFEILKNEEILLTTQLD 416
Query: 121 SLKRLIKNE 129
SLKRLIK +
Sbjct: 417 SLKRLIKEK 425
>gi|195947369 junction-mediating and regulatory protein [Homo
sapiens]
Length = 988
Score = 110 bits (275), Expect = 3e-25
Identities = 54/116 (46%), Positives = 84/116 (72%)
Query: 14 QLGMQKEMEQDVKRFGQAAWATAIPRLEKLKLMLAQETLQLMRAKELYLNRKRAEIQGKM 73
Q + M D K+FG+A+WA A R+EKL+ +++ETLQ+MRAKE+ L +++ ++ +M
Sbjct: 451 QKAVYDRMRADQKKFGKASWAAAAERMEKLQYAVSKETLQMMRAKEICLEQRKHALKEEM 510
Query: 74 EDLPEQEKNINVVDELEMQFYEIQLELYEVKFEILKNEEILLTTQLDSLKRLIKNE 129
+ L + I +D+LE +Y++QL+LYEV+FEILK EE+LLT QL+S+KRLI +
Sbjct: 511 QSLRGGTEAIARLDQLEADYYDLQLQLYEVQFEILKCEELLLTAQLESIKRLISEK 566
>gi|22538387 A-kinase anchor protein 9 isoform 2 [Homo sapiens]
Length = 3907
Score = 34.7 bits (78), Expect = 0.022
Identities = 34/126 (26%), Positives = 69/126 (54%), Gaps = 9/126 (7%)
Query: 8 YKKQLPQLGMQKEMEQDVK--RFGQAAWATAIPRL--EKLKLMLAQETLQLMRAKELYLN 63
YK+Q+ G+Q EM Q ++ +F + T +L E KL Q++L +++E+ L
Sbjct: 663 YKQQID--GLQNEMSQKIETMQFEKDNLITKQNQLILEISKLKDLQQSLVNSKSEEMTLQ 720
Query: 64 RKRAEIQGKMEDLPEQEKNINVVDELEMQFYEIQLELYEVKFEILKNEEILLTTQLDSLK 123
E+Q ++E L ++EK +++ E+Q +++ EL E + + +N+ QL++
Sbjct: 721 IN--ELQKEIEILRQEEKEKGTLEQ-EVQELQLKTELLEKQMKEKENDLQEKFAQLEAEN 777
Query: 124 RLIKNE 129
++K+E
Sbjct: 778 SILKDE 783
Score = 30.0 bits (66), Expect = 0.54
Identities = 27/105 (25%), Positives = 49/105 (46%), Gaps = 9/105 (8%)
Query: 17 MQKEMEQDVKRFGQAAWATAIPRLEKLKLMLAQE--------TLQLMRAKELYLNRKRAE 68
+QK++E+ R + T +L+ L+ E TLQ + +K E
Sbjct: 3348 LQKQLEEKHSRIVELLNETEKYKLDSLQTRQQMEKDRQVHRKTLQTEQEANTEGQKKMHE 3407
Query: 69 IQGKMEDLPEQ-EKNINVVDELEMQFYEIQLELYEVKFEILKNEE 112
+Q K+EDL Q E+ V +L+++ +Q + E + + L+ EE
Sbjct: 3408 LQSKVEDLQRQLEEKRQQVYKLDLEGQRLQGIMQEFQKQELEREE 3452
>gi|22538393 A-kinase anchor protein 9 isoform 3 [Homo sapiens]
Length = 3899
Score = 34.7 bits (78), Expect = 0.022
Identities = 34/126 (26%), Positives = 69/126 (54%), Gaps = 9/126 (7%)
Query: 8 YKKQLPQLGMQKEMEQDVK--RFGQAAWATAIPRL--EKLKLMLAQETLQLMRAKELYLN 63
YK+Q+ G+Q EM Q ++ +F + T +L E KL Q++L +++E+ L
Sbjct: 663 YKQQID--GLQNEMSQKIETMQFEKDNLITKQNQLILEISKLKDLQQSLVNSKSEEMTLQ 720
Query: 64 RKRAEIQGKMEDLPEQEKNINVVDELEMQFYEIQLELYEVKFEILKNEEILLTTQLDSLK 123
E+Q ++E L ++EK +++ E+Q +++ EL E + + +N+ QL++
Sbjct: 721 IN--ELQKEIEILRQEEKEKGTLEQ-EVQELQLKTELLEKQMKEKENDLQEKFAQLEAEN 777
Query: 124 RLIKNE 129
++K+E
Sbjct: 778 SILKDE 783
Score = 30.0 bits (66), Expect = 0.54
Identities = 27/105 (25%), Positives = 49/105 (46%), Gaps = 9/105 (8%)
Query: 17 MQKEMEQDVKRFGQAAWATAIPRLEKLKLMLAQE--------TLQLMRAKELYLNRKRAE 68
+QK++E+ R + T +L+ L+ E TLQ + +K E
Sbjct: 3340 LQKQLEEKHSRIVELLNETEKYKLDSLQTRQQMEKDRQVHRKTLQTEQEANTEGQKKMHE 3399
Query: 69 IQGKMEDLPEQ-EKNINVVDELEMQFYEIQLELYEVKFEILKNEE 112
+Q K+EDL Q E+ V +L+++ +Q + E + + L+ EE
Sbjct: 3400 LQSKVEDLQRQLEEKRQQVYKLDLEGQRLQGIMQEFQKQELEREE 3444
>gi|16418355 cAMP responsive element binding protein 3-like 1 [Homo
sapiens]
Length = 519
Score = 34.3 bits (77), Expect = 0.029
Identities = 26/81 (32%), Positives = 39/81 (48%), Gaps = 2/81 (2%)
Query: 52 LQLMRAKELYLNRKRAEIQGKMEDLPEQEKNINVVDELEMQFYEIQLELYEV--KFEILK 109
L L +A+E L R R +I+ K+ + K V+ LE + E E+ K E L+
Sbjct: 281 LPLTKAEEKALKRVRRKIKNKISAQESRRKKKEYVECLEKKVETFTSENNELWKKVETLE 340
Query: 110 NEEILLTTQLDSLKRLIKNEI 130
N L QL L+ L+ N+I
Sbjct: 341 NANRTLLQQLQKLQTLVTNKI 361
>gi|40789306 zinc finger protein 365 isoform C [Homo sapiens]
Length = 462
Score = 33.9 bits (76), Expect = 0.037
Identities = 28/101 (27%), Positives = 49/101 (48%), Gaps = 8/101 (7%)
Query: 18 QKEMEQDVKRFGQAAWATAIPRLEKLKLMLAQETLQLM--RAKELYLNRKRAEIQGKMED 75
+ + + R +A T R++KL LAQ+T +L+ RA + L +K+ E+Q +
Sbjct: 158 EAHVREKFNRMVEAVDRTIEKRIDKLTKELAQKTAELLEVRAAFVQLTQKKQEVQRRERA 217
Query: 76 LPEQEKNINVVDELEMQFYEIQLELYEVKFEILKNEEILLT 116
L Q VD ++ L E + E+L+ EE ++T
Sbjct: 218 LNRQ------VDVAVEMIAVLRQRLTESEEELLRKEEEVVT 252
>gi|40789310 zinc finger protein 365 isoform B [Homo sapiens]
Length = 333
Score = 33.9 bits (76), Expect = 0.037
Identities = 28/101 (27%), Positives = 49/101 (48%), Gaps = 8/101 (7%)
Query: 18 QKEMEQDVKRFGQAAWATAIPRLEKLKLMLAQETLQLM--RAKELYLNRKRAEIQGKMED 75
+ + + R +A T R++KL LAQ+T +L+ RA + L +K+ E+Q +
Sbjct: 158 EAHVREKFNRMVEAVDRTIEKRIDKLTKELAQKTAELLEVRAAFVQLTQKKQEVQRRERA 217
Query: 76 LPEQEKNINVVDELEMQFYEIQLELYEVKFEILKNEEILLT 116
L Q VD ++ L E + E+L+ EE ++T
Sbjct: 218 LNRQ------VDVAVEMIAVLRQRLTESEEELLRKEEEVVT 252
>gi|148596972 zinc finger protein 365 isoform A [Homo sapiens]
Length = 407
Score = 33.9 bits (76), Expect = 0.037
Identities = 28/101 (27%), Positives = 49/101 (48%), Gaps = 8/101 (7%)
Query: 18 QKEMEQDVKRFGQAAWATAIPRLEKLKLMLAQETLQLM--RAKELYLNRKRAEIQGKMED 75
+ + + R +A T R++KL LAQ+T +L+ RA + L +K+ E+Q +
Sbjct: 158 EAHVREKFNRMVEAVDRTIEKRIDKLTKELAQKTAELLEVRAAFVQLTQKKQEVQRRERA 217
Query: 76 LPEQEKNINVVDELEMQFYEIQLELYEVKFEILKNEEILLT 116
L Q VD ++ L E + E+L+ EE ++T
Sbjct: 218 LNRQ------VDVAVEMIAVLRQRLTESEEELLRKEEEVVT 252
>gi|20270377 DPY30 domain containing 1 [Homo sapiens]
Length = 177
Score = 33.1 bits (74), Expect = 0.064
Identities = 24/87 (27%), Positives = 49/87 (56%), Gaps = 5/87 (5%)
Query: 41 EKLKLMLAQETLQLMRAKELYLNRKRAEIQGKMEDLPEQEKNINVVDELEMQFYEIQLEL 100
E+ ++ QE ++ ++A+EL L +++ +Q ++E QEK + EL+ ++ E+
Sbjct: 60 ERELALMEQEMMERLKAEELLLQQQQLALQLELE---MQEKERQRIQELQRAQEQLGKEM 116
Query: 101 YEVKFEILKNEEILLTTQ--LDSLKRL 125
+++NE+IL + + LDS K L
Sbjct: 117 RMNMENLVRNEDILHSEEATLDSGKTL 143
Score = 26.6 bits (57), Expect = 6.0
Identities = 25/99 (25%), Positives = 46/99 (46%), Gaps = 5/99 (5%)
Query: 31 AAWATAIPRLEKLKLMLAQETLQLMRAKELYLNRKRAEIQGKMEDLPEQEKNINVVDELE 90
A W ++ + +E +L R +EL L + + K E+L Q++ + + ELE
Sbjct: 34 ALWIYKYKENVTMEQLRQKEMAKLERERELALMEQEMMERLKAEELLLQQQQLALQLELE 93
Query: 91 MQFYEIQLELYEVKFEILKNEEILLTTQLDSLKRLIKNE 129
MQ E Q E+ + +E L +++ L++NE
Sbjct: 94 MQEKERQRIQ-----ELQRAQEQLGKEMRMNMENLVRNE 127
>gi|146133848 golgi autoantigen, golgin subfamily a, 6 [Homo
sapiens]
Length = 693
Score = 32.3 bits (72), Expect = 0.11
Identities = 32/117 (27%), Positives = 58/117 (49%), Gaps = 8/117 (6%)
Query: 7 KYKKQLPQLGMQKEM----EQDVKRFGQAAWATAIPRLEKLKLMLAQETLQLMRAKELYL 62
+ +KQ +L Q+E E+ +++ + W RL K + L ++ +L ++ L
Sbjct: 380 RLRKQEQRLRKQEERLRKEEERLQKQEKRLWDQE-ERLWKKEERLQKQEERLALSQNHKL 438
Query: 63 NRKRAEIQGKMEDLPEQEKNINVVDELEMQFYEIQLELYEVKFEILKNEEILLTTQL 119
+++ AE Q EDL ++K+ +LE Q E+Q +L E E ++ L TQL
Sbjct: 439 DKQLAEPQCSFEDLNNEKKSAL---QLEQQVKELQEKLDEEHLEAASHQNQQLETQL 492
>gi|28269672 serologically defined colon cancer antigen 8 [Homo
sapiens]
Length = 713
Score = 32.3 bits (72), Expect = 0.11
Identities = 23/65 (35%), Positives = 33/65 (50%), Gaps = 1/65 (1%)
Query: 18 QKEMEQDVKRFGQAAWATAIPRLEKLKLMLAQETLQLMRAKELYLNRKRAEIQGKMEDLP 77
++ D FG+AA A LEKLKL +E ++ ++ +L AE Q EDL
Sbjct: 203 KRPFSHDNADFGKAASAGEQLELEKLKLTY-EEKCEIEESQLKFLRNDLAEYQRTCEDLK 261
Query: 78 EQEKN 82
EQ K+
Sbjct: 262 EQLKH 266
>gi|24308171 zinc finger protein 280C [Homo sapiens]
Length = 737
Score = 32.0 bits (71), Expect = 0.14
Identities = 20/58 (34%), Positives = 33/58 (56%), Gaps = 3/58 (5%)
Query: 74 EDLPEQEKNINVVDELEMQFYEIQLELYEVKFEILKNE---EILLTTQLDSLKRLIKN 128
+D P Q KNI+ + EL M+ E +LE ++ K E ++E E++ ++ S K I N
Sbjct: 3 DDKPFQPKNISKMAELFMECEEEELEPWQKKVEETQDEDDDELIFVGEISSSKPAISN 60
>gi|94538359 golgi autoantigen, golgin subfamily a, 6B [Homo
sapiens]
Length = 693
Score = 32.0 bits (71), Expect = 0.14
Identities = 32/117 (27%), Positives = 57/117 (48%), Gaps = 8/117 (6%)
Query: 7 KYKKQLPQLGMQKEM----EQDVKRFGQAAWATAIPRLEKLKLMLAQETLQLMRAKELYL 62
+ +KQ +L Q+E E+ +++ + W RL K + L ++ +L ++ L
Sbjct: 380 RLRKQEQRLRKQEERLRKEEERLQKQEKRLWDQE-ERLWKKEERLQKQEERLALSQNHKL 438
Query: 63 NRKRAEIQGKMEDLPEQEKNINVVDELEMQFYEIQLELYEVKFEILKNEEILLTTQL 119
+++ AE Q EDL ++K+ +LE Q E+Q +L E E + L TQL
Sbjct: 439 DKQLAEPQCSFEDLNNEKKSAL---QLEQQVKELQEKLDEEHLEAASQQNQQLETQL 492
>gi|31563507 GRIP and coiled-coil domain-containing 2 [Homo sapiens]
Length = 1684
Score = 31.2 bits (69), Expect = 0.24
Identities = 22/96 (22%), Positives = 48/96 (50%), Gaps = 5/96 (5%)
Query: 37 IPRLEKLKLMLAQETLQLMRAKELYLNRKRAEIQGKMEDLPEQEKNINVVDELEMQFYEI 96
I L+ +L + L++ RAK + AE K + + E +N ++EL++Q +
Sbjct: 1075 IETLQSNAKLLEVQILEVQRAKAMVDKELEAEKLQKEQKIKEHATTVNELEELQVQLQKE 1134
Query: 97 QLELYEV--KFEILK---NEEILLTTQLDSLKRLIK 127
+ +L + + E++K + L+ ++ +RL+K
Sbjct: 1135 KKQLQKTMQELELVKKDAQQTTLMNMEIADYERLMK 1170
>gi|223634475 golgi autoantigen, golgin subfamily a, 6D [Homo
sapiens]
Length = 693
Score = 31.2 bits (69), Expect = 0.24
Identities = 32/117 (27%), Positives = 56/117 (47%), Gaps = 8/117 (6%)
Query: 7 KYKKQLPQLGMQKEM----EQDVKRFGQAAWATAIPRLEKLKLMLAQETLQLMRAKELYL 62
+ +KQ +L Q+E E+ +++ + W RL K + L ++ +L ++ L
Sbjct: 380 RLRKQEQRLRKQEERLRKEEERLQKQEKRLWDQE-ERLWKKEERLQKQEERLALSQNHKL 438
Query: 63 NRKRAEIQGKMEDLPEQEKNINVVDELEMQFYEIQLELYEVKFEILKNEEILLTTQL 119
+++ AE Q EDL ++K+ +LE Q E+Q +L E E L TQL
Sbjct: 439 DKQLAEPQCSFEDLNNEKKSAL---QLEQQVKELQEKLDEEHLEAASQRNQQLETQL 492
>gi|239755047 PREDICTED: ankyrin repeat domain 18A [Homo sapiens]
Length = 1415
Score = 31.2 bits (69), Expect = 0.24
Identities = 31/120 (25%), Positives = 60/120 (50%), Gaps = 20/120 (16%)
Query: 7 KYKKQLPQ--LGMQKEMEQDVKRFGQAAWATAIPRLEKLKLMLAQETLQ-LMRAKELYLN 63
K KK L + L ++ ME+D+ G +L++ K L + +Q + + +E++L
Sbjct: 900 KDKKMLEEEVLNLKTHMEKDMVELG---------KLQEYKSELDERAVQEIEKLEEIHL- 949
Query: 64 RKRAEIQGKMEDLPEQEKNINVVDELEMQFYEIQLELYEVKFEILKNEEILLTTQLDSLK 123
+K+AE + ++E L N + ++ E+ L+ E KF +K +TT+L+ K
Sbjct: 950 QKQAEYEKQLEQL-------NKDNTASLKKKELTLKDVECKFSKMKTAYEEVTTELEEFK 1002
>gi|239749578 PREDICTED: ankyrin repeat domain 18A [Homo sapiens]
Length = 1002
Score = 31.2 bits (69), Expect = 0.24
Identities = 31/120 (25%), Positives = 60/120 (50%), Gaps = 20/120 (16%)
Query: 7 KYKKQLPQ--LGMQKEMEQDVKRFGQAAWATAIPRLEKLKLMLAQETLQ-LMRAKELYLN 63
K KK L + L ++ ME+D+ G +L++ K L + +Q + + +E++L
Sbjct: 793 KDKKMLEEEVLNLKTHMEKDMVELG---------KLQEYKSELDERAVQEIEKLEEIHL- 842
Query: 64 RKRAEIQGKMEDLPEQEKNINVVDELEMQFYEIQLELYEVKFEILKNEEILLTTQLDSLK 123
+K+AE + ++E L N + ++ E+ L+ E KF +K +TT+L+ K
Sbjct: 843 QKQAEYEKQLEQL-------NKDNTASLKKKELTLKDVECKFSKMKTAYEEVTTELEEFK 895
>gi|51472437 PREDICTED: golgi autoantigen, golgin subfamily a, 6C
isoform 1 [Homo sapiens]
Length = 693
Score = 31.2 bits (69), Expect = 0.24
Identities = 32/117 (27%), Positives = 56/117 (47%), Gaps = 8/117 (6%)
Query: 7 KYKKQLPQLGMQKEM----EQDVKRFGQAAWATAIPRLEKLKLMLAQETLQLMRAKELYL 62
+ +KQ +L Q+E E+ +++ + W RL K + L ++ +L ++ L
Sbjct: 380 RLRKQEQRLRKQEERLRKEEERLQKQEKRLWDQE-ERLWKKEERLQKQEERLALSQNHKL 438
Query: 63 NRKRAEIQGKMEDLPEQEKNINVVDELEMQFYEIQLELYEVKFEILKNEEILLTTQL 119
+++ AE Q EDL ++K+ +LE Q E+Q +L E E L TQL
Sbjct: 439 DKQLAEPQCSFEDLNNEKKSAL---QLEQQVKELQEKLDEEHLEAASQRNQQLETQL 492
>gi|239743724 PREDICTED: ankyrin repeat domain 18A [Homo sapiens]
Length = 1415
Score = 31.2 bits (69), Expect = 0.24
Identities = 31/120 (25%), Positives = 60/120 (50%), Gaps = 20/120 (16%)
Query: 7 KYKKQLPQ--LGMQKEMEQDVKRFGQAAWATAIPRLEKLKLMLAQETLQ-LMRAKELYLN 63
K KK L + L ++ ME+D+ G +L++ K L + +Q + + +E++L
Sbjct: 900 KDKKMLEEEVLNLKTHMEKDMVELG---------KLQEYKSELDERAVQEIEKLEEIHL- 949
Query: 64 RKRAEIQGKMEDLPEQEKNINVVDELEMQFYEIQLELYEVKFEILKNEEILLTTQLDSLK 123
+K+AE + ++E L N + ++ E+ L+ E KF +K +TT+L+ K
Sbjct: 950 QKQAEYEKQLEQL-------NKDNTASLKKKELTLKDVECKFSKMKTAYEEVTTELEEFK 1002
>gi|63053524 ubiquitin specific protease 1 [Homo sapiens]
Length = 785
Score = 31.2 bits (69), Expect = 0.24
Identities = 14/43 (32%), Positives = 29/43 (67%), Gaps = 3/43 (6%)
Query: 49 QETLQLMRAKELYLNRKRAEIQGKMEDLPEQEKNINVVDELEM 91
QET QL++ +E+ + AE+ K+E++P ++ +N ++ +EM
Sbjct: 212 QETCQLLKKEEV---KNVAELPTKVEEIPHPKEEMNGINSIEM 251
>gi|63053522 ubiquitin specific protease 1 [Homo sapiens]
Length = 785
Score = 31.2 bits (69), Expect = 0.24
Identities = 14/43 (32%), Positives = 29/43 (67%), Gaps = 3/43 (6%)
Query: 49 QETLQLMRAKELYLNRKRAEIQGKMEDLPEQEKNINVVDELEM 91
QET QL++ +E+ + AE+ K+E++P ++ +N ++ +EM
Sbjct: 212 QETCQLLKKEEV---KNVAELPTKVEEIPHPKEEMNGINSIEM 251
>gi|31543910 ubiquitin specific protease 1 [Homo sapiens]
Length = 785
Score = 31.2 bits (69), Expect = 0.24
Identities = 14/43 (32%), Positives = 29/43 (67%), Gaps = 3/43 (6%)
Query: 49 QETLQLMRAKELYLNRKRAEIQGKMEDLPEQEKNINVVDELEM 91
QET QL++ +E+ + AE+ K+E++P ++ +N ++ +EM
Sbjct: 212 QETCQLLKKEEV---KNVAELPTKVEEIPHPKEEMNGINSIEM 251
>gi|8922950 meiosis-specific nuclear structural 1 [Homo sapiens]
Length = 495
Score = 31.2 bits (69), Expect = 0.24
Identities = 32/125 (25%), Positives = 61/125 (48%), Gaps = 8/125 (6%)
Query: 9 KKQLPQLGMQKEMEQDVKRFGQAAWATAIPRLEKLKLM----LAQETLQLMRAKELYLNR 64
+KQ +L ++ E D++ Q A RL++L+L LA E +L + + L +
Sbjct: 53 RKQFLRLLQNEQFELDMEEAIQKAEENK--RLKELQLKQEEKLAMELAKL-KHESLKDEK 109
Query: 65 KRAEIQGKMEDLPEQEKNINVVDELEMQFYEIQLELYEVKFEILKNEEILLTTQLDSLKR 124
R +++ +L E EK + + + +I E +K+E +K + + T ++ KR
Sbjct: 110 MRQQVRENSIELRELEKKLKAAYMNKERAAQIA-EKDAIKYEQMKRDAEIAKTMMEEHKR 168
Query: 125 LIKNE 129
+IK E
Sbjct: 169 IIKEE 173
>gi|237649015 EBNA1 binding protein 2 isoform 2 [Homo sapiens]
Length = 306
Score = 30.8 bits (68), Expect = 0.32
Identities = 26/85 (30%), Positives = 39/85 (45%), Gaps = 7/85 (8%)
Query: 2 EASVPKYKKQL---PQLGMQKEMEQDVKRFGQAAWATAIPRLEKLKLMLAQET--LQLMR 56
EA P+ K Q P+ Q+EM R QAA +PRL +LK+ + T M
Sbjct: 84 EAPAPQNKDQKAVDPEDDFQREMS--FYRQAQAAVLAVLPRLHQLKVPTKRPTDYFAEMA 141
Query: 57 AKELYLNRKRAEIQGKMEDLPEQEK 81
+L + + R ++Q K + EK
Sbjct: 142 KSDLQMQKIRQKLQTKQAAMERSEK 166
>gi|237649012 EBNA1 binding protein 2 isoform 1 [Homo sapiens]
Length = 361
Score = 30.8 bits (68), Expect = 0.32
Identities = 26/85 (30%), Positives = 39/85 (45%), Gaps = 7/85 (8%)
Query: 2 EASVPKYKKQL---PQLGMQKEMEQDVKRFGQAAWATAIPRLEKLKLMLAQET--LQLMR 56
EA P+ K Q P+ Q+EM R QAA +PRL +LK+ + T M
Sbjct: 139 EAPAPQNKDQKAVDPEDDFQREMS--FYRQAQAAVLAVLPRLHQLKVPTKRPTDYFAEMA 196
Query: 57 AKELYLNRKRAEIQGKMEDLPEQEK 81
+L + + R ++Q K + EK
Sbjct: 197 KSDLQMQKIRQKLQTKQAAMERSEK 221
>gi|197313728 pleckstrin homology-like domain, family B, member 2
isoform b [Homo sapiens]
Length = 1237
Score = 30.8 bits (68), Expect = 0.32
Identities = 23/72 (31%), Positives = 42/72 (58%), Gaps = 5/72 (6%)
Query: 50 ETLQLMRAKEL--YLNRKRAEIQGKMEDLPEQEKNINVVDELEMQFYEIQLELYEVKFEI 107
ET +LM+ KE+ +LNRK AE++ + + E+ K+ +++D F +++ + E +
Sbjct: 663 ETTELMKEKEILDHLNRKIAELEKNI--VGEKTKDADLLDVESKHFEDLEFQQLEHESR- 719
Query: 108 LKNEEILLTTQL 119
L E+ LT QL
Sbjct: 720 LDEEKENLTQQL 731
Database: hs.faa
Posted date: Aug 4, 2009 4:42 PM
Number of letters in database: 18,247,518
Number of sequences in database: 37,866
Lambda K H
0.315 0.132 0.348
Gapped
Lambda K H
0.267 0.0410 0.140
Matrix: BLOSUM62
Gap Penalties: Existence: 11, Extension: 1
Number of Hits to DB: 4,095,228
Number of Sequences: 37866
Number of extensions: 158287
Number of successful extensions: 985
Number of sequences better than 10.0: 30
Number of HSP's better than 10.0 without gapping: 24
Number of HSP's successfully gapped in prelim test: 132
Number of HSP's that attempted gapping in prelim test: 911
Number of HSP's gapped (non-prelim): 212
length of query: 130
length of database: 18,247,518
effective HSP length: 90
effective length of query: 40
effective length of database: 14,839,578
effective search space: 593583120
effective search space used: 593583120
T: 11
A: 40
X1: 16 ( 7.3 bits)
X2: 38 (14.6 bits)
X3: 64 (24.7 bits)
S1: 41 (21.6 bits)
S2: 56 (26.2 bits)
Search results were obtained with NCBI BLAST and RefSeq entries.
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Guide to the Human Genome
Copyright © 2010 by Stewart Scherer. All rights reserved.