Guide to the Human Genome
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Name: LOC100287971 Sequence: fasta or formatted (302aa) NCBI GI: 239744563
Description:

PREDICTED: hypothetical protein XP_002343195

Not currently referenced in the text

Composition:

amino acid map
 Amino acid        Percentage    Count  Longest homopolymer
 A alanine             5.3         16           2
 C cysteine            3.0          9           1
 D aspartate           3.6         11           1
 E glutamate           8.9         27           3
 F phenylalanine       4.0         12           2
 G glycine            10.3         31           2
 H histidine           3.3         10           2
 I isoleucine          2.0          6           1
 K lysine              3.6         11           1
 L leucine            13.2         40           2
 M methionine          1.3          4           2
 N asparagine          1.7          5           1
 P proline             8.3         25           2
 Q glutamine           4.3         13           2
 R arginine            4.0         12           1
 S serine              5.0         15           2
 T threonine           4.3         13           2
 V valine             11.9         36           2
 W tryptophan          1.0          3           1
 Y tyrosine            1.0          3           1
Comparative genomics:

Search single species RefSeq proteins at NCBI
   H. sapiens
   M. musculus
   D. rerio
   C. intestinalis
   S. purpuratus
   D. melanogaster
   C. elegans
   A. thaliana
   S. cerevisiae
   E. coli W3110
   A. pernix K1

Search summary

comparative genomics plot

   Figure data

Additional searches of
RefSeq proteins at NCBI

   All
   Eukaryotes
   Bacteria
   Archaea
   Viruses
   Primates
   Mammals
   Vertebrates

Related human proteins:
Protein          Relative score         Description

Self-match            1.000   PREDICTED: hypothetical protein XP_002343195 
GPR64                 0.013   G protein-coupled receptor 64 isoform 3 
GPR64                 0.013   G protein-coupled receptor 64 isoform 2 
GPR64                 0.013   G protein-coupled receptor 64 isoform 1 
GPR64                 0.013   G protein-coupled receptor 64 isoform 4 
ABHD14B               0.012   abhydrolase domain containing 14B 
ABHD14B               0.012   abhydrolase domain containing 14B 
TET3                  0.008   tet oncogene family member 3 
TYSND1                0.008   trypsin domain containing 1 isoform a 
LOC100292515          0.007   PREDICTED: hypothetical protein 
LOC100289910          0.007   PREDICTED: hypothetical protein XP_002347211 
LOC100287264          0.007   PREDICTED: hypothetical protein XP_002343075 
SEMA3G                0.005   semaphorin sem2 
PPM1F                 0.005   protein phosphatase 1F 
LRRC39                0.005   leucine rich repeat containing 39 
HSPBP1                0.005   hsp70-interacting protein 
HSPBP1                0.005   hsp70-interacting protein 
LOC100293927          0.005   PREDICTED: hypothetical protein 
LOC100290226          0.005   PREDICTED: hypothetical protein XP_002347217 
LOC100288718          0.005   PREDICTED: hypothetical protein XP_002343085 
ETFA                  0.005   electron transfer flavoprotein, alpha polypeptide iso...
Human BLASTP results (used to prepare the table)

Gene descriptions are from NCBI RefSeq. Search results were obtained with NCBI BLAST and RefSeq entries. When identical proteins are present, the self-match may not be listed first in BLASTP output. In such cases, the table above has been reordered to place it first.

See About the Figures for the scoring system used in the figure above right. The same scoring system was used in the table of BLASTP results.


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Guide to the Human Genome
Copyright © 2010 by Stewart Scherer. All rights reserved.

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