Guide to the Human Genome
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Name: IKZF5 Sequence: fasta or formatted (419aa) NCBI GI: 116812565
Description:

zinc finger protein, subfamily 1A, 5

Referenced in:

Kruppel-related Zinc Finger Proteins

Composition:

amino acid map
 Amino acid        Percentage    Count  Longest homopolymer
 A alanine             5.3         22           1
 C cysteine            3.8         16           1
 D aspartate           5.0         21           1
 E glutamate           5.3         22           1
 F phenylalanine       2.9         12           1
 G glycine             6.0         25           2
 H histidine           5.7         24           2
 I isoleucine          3.3         14           1
 K lysine              5.5         23           2
 L leucine             6.9         29           2
 M methionine          2.9         12           1
 N asparagine          4.8         20           1
 P proline             9.1         38           2
 Q glutamine           5.7         24           2
 R arginine            4.5         19           3
 S serine             10.7         45           3
 T threonine           5.0         21           2
 V valine              4.3         18           2
 W tryptophan          0.2          1           1
 Y tyrosine            3.1         13           1
Comparative genomics:

Search single species RefSeq proteins at NCBI
   H. sapiens
   M. musculus
   D. rerio
   C. intestinalis
   S. purpuratus
   D. melanogaster
   C. elegans
   A. thaliana
   S. cerevisiae
   E. coli W3110
   A. pernix K1

Search summary

comparative genomics plot

   Figure data

Additional searches of
RefSeq proteins at NCBI

   All
   Eukaryotes
   Bacteria
   Archaea
   Viruses
   Primates
   Mammals
   Vertebrates

Related human proteins:
Protein          Relative score         Description

Self-match            1.000   zinc finger protein, subfamily 1A, 5 
IKZF2                 0.135   helios isoform 1 
IKZF3                 0.134   aiolos isoform 1 
IKZF2                 0.132   helios isoform 2 
IKZF1                 0.130   zinc finger protein, subfamily 1A, 1 (Ikaros) 
IKZF3                 0.129   aiolos isoform 4 
IKZF3                 0.127   aiolos isoform 3 
IKZF3                 0.121   aiolos isoform 6 
IKZF4                 0.116   zinc finger protein, subfamily 1A, 4 
IKZF3                 0.093   aiolos isoform 2 
REST                  0.080   RE1-silencing transcription factor 
ZFP64                 0.075   zinc finger protein 64 isoform c 
ZFP64                 0.075   zinc finger protein 64 isoform b 
ZFP64                 0.075   zinc finger protein 64 isoform a 
ZNF267                0.073   zinc finger protein 267 
ZNF513                0.072   zinc finger protein 513 
CTCF                  0.072   CCCTC-binding factor 
ZNF845                0.071   zinc finger protein 845 
ZFP64                 0.071   zinc finger protein 64 isoform d 
ZNF677                0.071   zinc finger protein 677 
IKZF3                 0.070   aiolos isoform 5 
ZFAT                  0.069   zinc finger protein 406 isoform ZFAT-1 
ZFAT                  0.069   zinc finger protein 406 isoform TR-ZFAT 
CTCFL                 0.067   CCCTC-binding factor-like protein 
ZNF236                0.067   zinc finger protein 236 
ZNF470                0.066   zinc finger protein 470 
ZNF320                0.066   zinc finger protein 320 
ZNF471                0.065   zinc finger protein 471 
ZNF596                0.065   zinc finger protein 596 
ZNF596                0.065   zinc finger protein 596 
Human BLASTP results (used to prepare the table)

Gene descriptions are from NCBI RefSeq. Search results were obtained with NCBI BLAST and RefSeq entries. When identical proteins are present, the self-match may not be listed first in BLASTP output. In such cases, the table above has been reordered to place it first.

See About the Figures for the scoring system used in the figure above right. The same scoring system was used in the table of BLASTP results.


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Guide to the Human Genome
Copyright © 2010 by Stewart Scherer. All rights reserved.

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