Guide to the Human Genome
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Name: IRF2BP2 Sequence: fasta or formatted (571aa) NCBI GI: 116734706
Description:

interferon regulatory factor 2 binding protein 2 isoform B

Referenced in:

Interferon

Other entries for this name:
alt prot [587aa] interferon regulatory factor 2 binding protein 2 isoform A
Composition:

amino acid map
 Amino acid        Percentage    Count  Longest homopolymer
 A alanine            13.8         79           4
 C cysteine            2.3         13           2
 D aspartate           2.6         15           1
 E glutamate           6.0         34           2
 F phenylalanine       2.1         12           1
 G glycine             8.4         48           2
 H histidine           2.8         16           1
 I isoleucine          1.8         10           1
 K lysine              4.0         23           2
 L leucine             7.2         41           2
 M methionine          1.4          8           1
 N asparagine          3.0         17           1
 P proline            12.6         72           4
 Q glutamine           4.7         27           5
 R arginine            6.1         35           2
 S serine              9.8         56           3
 T threonine           4.7         27           2
 V valine              5.1         29           1
 W tryptophan          0.9          5           1
 Y tyrosine            0.7          4           1
Comparative genomics:

Search single species RefSeq proteins at NCBI
   H. sapiens
   M. musculus
   D. rerio
   C. intestinalis
   S. purpuratus
   D. melanogaster
   C. elegans
   A. thaliana
   S. cerevisiae
   E. coli W3110
   A. pernix K1

Search summary

comparative genomics plot

   Figure data

Additional searches of
RefSeq proteins at NCBI

   All
   Eukaryotes
   Bacteria
   Archaea
   Viruses
   Primates
   Mammals
   Vertebrates

Related human proteins:
Protein          Relative score         Description

Self-match            1.000   interferon regulatory factor 2 binding protein 2 is... 
IRF2BP2               0.991   interferon regulatory factor 2 binding protein 2 is...
C14orf4               0.241   chromosome 14 open reading frame 4 
IRF2BP1               0.146   interferon regulatory factor 2 binding protein 1 [Ho...
PCLO                  0.032   piccolo isoform 2 
PCLO                  0.032   piccolo isoform 1 
NACA                  0.032   nascent polypeptide-associated complex alpha subuni...
GGN                   0.031   gametogenetin 
CASKIN2               0.029   cask-interacting protein 2 isoform b 
CASKIN2               0.029   cask-interacting protein 2 isoform a 
FLJ22184              0.028   PREDICTED: hypothetical protein FLJ22184 
FLJ22184              0.025   PREDICTED: hypothetical protein LOC80164 
LOC645602             0.025   PREDICTED: hypothetical protein 
LOC645602             0.025   PREDICTED: hypothetical protein 
LOC645602             0.025   PREDICTED: hypothetical protein 
TAF4                  0.025   TBP-associated factor 4 
RAPH1                 0.023   Ras association and pleckstrin homology domains 1 is...
C2orf55               0.022   hypothetical protein LOC343990 
SRRM1                 0.022   serine/arginine repetitive matrix 1 
CASKIN1               0.022   CASK interacting protein 1 
ARHGAP17              0.022   nadrin isoform 1 
NKX1-1                0.022   PREDICTED: NK1 homeobox 1 
FBRSL1                0.021   fibrosin-like 1 
LOC100289716          0.021   PREDICTED: hypothetical protein XP_002346898 
LOC100289602          0.021   PREDICTED: hypothetical protein XP_002342755 
LOC100289602          0.021   PREDICTED: hypothetical protein 
NHSL1                 0.020   NHS-like 1 
LOC100293812          0.020   PREDICTED: hypothetical protein 
FSCB                  0.020   fibrous sheath CABYR binding protein 
WIPF2                 0.020   WIRE protein 
Human BLASTP results (used to prepare the table)

Gene descriptions are from NCBI RefSeq. Search results were obtained with NCBI BLAST and RefSeq entries. When identical proteins are present, the self-match may not be listed first in BLASTP output. In such cases, the table above has been reordered to place it first.

See About the Figures for the scoring system used in the figure above right. The same scoring system was used in the table of BLASTP results.


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Guide to the Human Genome
Copyright © 2010 by Stewart Scherer. All rights reserved.

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