LOC100288238 17713

Name: LOC100288238	Sequence: fasta or formatted (239aa)		NCBI GI: 239743690
Description: PREDICTED: hypothetical protein XP_002342947		Not currently referenced in the text
Other entries for this name: alt mRNA {239aa} PREDICTED: hypothetical protein
Composition: Amino acid Percentage Count Longest homopolymer A alanine 8.4 20 2 C cysteine 1.3 3 1 D aspartate 5.0 12 1 E glutamate 3.3 8 1 F phenylalanine 3.3 8 1 G glycine 13.0 31 2 H histidine 2.1 5 1 I isoleucine 2.5 6 2 K lysine 2.1 5 2 L leucine 9.6 23 3 M methionine 0.4 1 1 N asparagine 1.7 4 1 P proline 12.1 29 5 Q glutamine 3.8 9 1 R arginine 11.7 28 2 S serine 9.2 22 2 T threonine 5.4 13 1 V valine 2.9 7 1 W tryptophan 1.7 4 1 Y tyrosine 0.4 1 1			Comparative genomics: Search single species RefSeq proteins at NCBI H. sapiens M. musculus D. rerio C. intestinalis S. purpuratus D. melanogaster C. elegans A. thaliana S. cerevisiae E. coli W3110 A. pernix K1 Search summary Figure data Additional searches of RefSeq proteins at NCBI All Eukaryotes Bacteria Archaea Viruses Primates Mammals Vertebrates
Related human proteins: Protein Relative score Description Self-match 1.000 PREDICTED: hypothetical protein XP_002342947 LOC100293814 1.000 PREDICTED: hypothetical protein LOC100288238 1.000 PREDICTED: hypothetical protein LOC100130255 0.034 PREDICTED: hypothetical protein LOC100130255 0.034 PREDICTED: hypothetical protein LOC100130255 0.034 PREDICTED: hypothetical protein LOC339192 0.032 PREDICTED: hypothetical protein LOC339192 0.032 PREDICTED: hypothetical protein LOC339192 0.032 PREDICTED: hypothetical protein COL21A1 0.030 collagen, type XXI, alpha 1 precursor EMID1 0.030 EMI domain containing 1 COL7A1 0.025 alpha 1 type VII collagen precursor FLJ37078 0.021 hypothetical protein LOC222183 LOC100290812 0.021 PREDICTED: hypothetical protein XP_002347678 LOC100288205 0.021 PREDICTED: hypothetical protein XP_002343496 COL3A1 0.021 collagen type III alpha 1 preproprotein LOC100293975 0.021 PREDICTED: hypothetical protein C19orf61 0.021 hypothetical protein LOC56006 COL9A3 0.021 alpha 3 type IX collagen C1QTNF9B 0.019 C1q and tumor necrosis factor related protein 9B [Ho... LOC388279 0.019 PREDICTED: hypothetical protein LOC65998 0.017 hypothetical protein LOC65998 CABP1 0.017 calcium binding protein 1 isoform 3 SCARA3 0.017 scavenger receptor class A, member 3 isoform 1 [Homo... SRRM1 0.017 serine/arginine repetitive matrix 1 COL5A1 0.015 alpha 1 type V collagen preproprotein MYO15A 0.015 myosin XV HOXA10 0.015 homeobox A10 isoform a LOC100287063 0.015 PREDICTED: hypothetical protein XP_002342368 FLJ22184 0.015 PREDICTED: hypothetical protein FLJ22184 Human BLASTP results (used to prepare the table)

Gene descriptions are from NCBI RefSeq. Search results were obtained with NCBI BLAST and RefSeq entries. When identical proteins are present, the self-match may not be listed first in BLASTP output. In such cases, the table above has been reordered to place it first.

See About the Figures for the scoring system used in the figure above right. The same scoring system was used in the table of BLASTP results.