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Search of human proteins with 239743600
BLASTP 2.2.11 [Jun-05-2005]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= gi|239743600 PREDICTED: hypothetical protein XP_002342902 [Homo
sapiens]
(675 letters)
Database: hs.faa
37,866 sequences; 18,247,518 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
gi|239743602 PREDICTED: hypothetical protein XP_002342903 [Homo ... 1373 0.0
gi|239743600 PREDICTED: hypothetical protein XP_002342902 [Homo ... 1373 0.0
gi|239743598 PREDICTED: hypothetical protein XP_002342901 [Homo ... 1373 0.0
gi|239743596 PREDICTED: hypothetical protein XP_002342900 [Homo ... 1373 0.0
gi|126273519 exonuclease GOR [Homo sapiens] 1371 0.0
gi|239743594 PREDICTED: hypothetical protein XP_002342913, parti... 1118 0.0
gi|145199237 transcription elongation factor B polypeptide 3 bin... 691 0.0
gi|222136615 exonuclease NEF-sp isoform 2 [Homo sapiens] 108 1e-23
gi|222136613 exonuclease NEF-sp isoform 1 [Homo sapiens] 108 1e-23
gi|194239666 interferon stimulated exonuclease gene 20kDa-like 1... 81 4e-15
gi|6857800 interferon stimulated exonuclease [Homo sapiens] 74 4e-13
gi|13569960 interferon stimulated exonuclease gene 20kDa-like 2 ... 67 7e-11
gi|76781492 XPMC2 prevents mitotic catastrophe 2 homolog [Homo s... 56 9e-08
gi|188536114 PAN2 polyA specific ribonuclease subunit homolog is... 48 3e-05
gi|188536112 PAN2 polyA specific ribonuclease subunit homolog is... 48 3e-05
gi|63252863 BTB (POZ) domain containing 12 [Homo sapiens] 44 6e-04
gi|239756987 PREDICTED: hypothetical protein XP_002345138 [Homo ... 40 0.005
gi|239746003 PREDICTED: hypothetical protein XP_002344191 [Homo ... 40 0.005
gi|118572613 splicing coactivator subunit SRm300 [Homo sapiens] 40 0.005
gi|163965366 nascent polypeptide-associated complex alpha subuni... 40 0.009
gi|148762969 myeloid/lymphoid or mixed-lineage leukemia 2 [Homo ... 37 0.060
gi|122937321 UNC homeobox [Homo sapiens] 37 0.078
gi|38026934 Rho guanine nucleotide exchange factor (GEF) 11 isof... 36 0.10
gi|7662086 Rho guanine nucleotide exchange factor (GEF) 11 isofo... 36 0.10
gi|37693995 Kruppel-like factor 13 [Homo sapiens] 35 0.17
gi|148833506 obscurin, cytoskeletal calmodulin and titin-interac... 35 0.23
gi|14602439 Williams Beuren syndrome chromosome region 14 isofor... 35 0.30
gi|14602437 Williams Beuren syndrome chromosome region 14 isofor... 35 0.30
gi|14602435 Williams Beuren syndrome chromosome region 14 isofor... 35 0.30
gi|14602433 Williams Beuren syndrome chromosome region 14 isofor... 35 0.30
>gi|239743602 PREDICTED: hypothetical protein XP_002342903 [Homo
sapiens]
Length = 675
Score = 1373 bits (3554), Expect = 0.0
Identities = 675/675 (100%), Positives = 675/675 (100%)
Query: 1 MLRATAPCWFPPGYPEAKKVAEEAALEASRHLGGEQSQAGAPEGSKMLRATAPCWFRPGY 60
MLRATAPCWFPPGYPEAKKVAEEAALEASRHLGGEQSQAGAPEGSKMLRATAPCWFRPGY
Sbjct: 1 MLRATAPCWFPPGYPEAKKVAEEAALEASRHLGGEQSQAGAPEGSKMLRATAPCWFRPGY 60
Query: 61 PEAKKVAKEAAPEASRHLGAEQSPAGAPEGSKMLRATAPCWFPPGYPEAKKVAEEAALEA 120
PEAKKVAKEAAPEASRHLGAEQSPAGAPEGSKMLRATAPCWFPPGYPEAKKVAEEAALEA
Sbjct: 61 PEAKKVAKEAAPEASRHLGAEQSPAGAPEGSKMLRATAPCWFPPGYPEAKKVAEEAALEA 120
Query: 121 PEFPLPSHQPAQSFGLWVPQMHKQASAFVDIQAEPQNRGPAVPPAWPKMVTESCYFPAQR 180
PEFPLPSHQPAQSFGLWVPQMHKQASAFVDIQAEPQNRGPAVPPAWPKMVTESCYFPAQR
Sbjct: 121 PEFPLPSHQPAQSFGLWVPQMHKQASAFVDIQAEPQNRGPAVPPAWPKMVTESCYFPAQR 180
Query: 181 GSACRLPAAPRLTERPSGVRISAPRKRKTIAHSSSPCLVTGYTDAKRTRVASSSQRSRGS 240
GSACRLPAAPRLTERPSGVRISAPRKRKTIAHSSSPCLVTGYTDAKRTRVASSSQRSRGS
Sbjct: 181 GSACRLPAAPRLTERPSGVRISAPRKRKTIAHSSSPCLVTGYTDAKRTRVASSSQRSRGS 240
Query: 241 KVGRQPGKTRNRSGMACKTTATTSSKRIVRRASLPSLSLKKPIILRSSGCQVPTVLRRGY 300
KVGRQPGKTRNRSGMACKTTATTSSKRIVRRASLPSLSLKKPIILRSSGCQVPTVLRRGY
Sbjct: 241 KVGRQPGKTRNRSGMACKTTATTSSKRIVRRASLPSLSLKKPIILRSSGCQVPTVLRRGY 300
Query: 301 LQLFTEECLKFCASKQEAEEKALNEEKVAYDCSPNKNRYLNVVLNTLKRLKGLTPSSMPG 360
LQLFTEECLKFCASKQEAEEKALNEEKVAYDCSPNKNRYLNVVLNTLKRLKGLTPSSMPG
Sbjct: 301 LQLFTEECLKFCASKQEAEEKALNEEKVAYDCSPNKNRYLNVVLNTLKRLKGLTPSSMPG 360
Query: 361 LSRAALYSRLQEFLLTQDQLKENGYPFPHPERPGGAVLFTGQGKGPGDSSCRVCCRCGTE 420
LSRAALYSRLQEFLLTQDQLKENGYPFPHPERPGGAVLFTGQGKGPGDSSCRVCCRCGTE
Sbjct: 361 LSRAALYSRLQEFLLTQDQLKENGYPFPHPERPGGAVLFTGQGKGPGDSSCRVCCRCGTE 420
Query: 421 YLVSSSGRCVRDQLCYYHWGRVRSSQVAGGRVSQYTCCAAAPGSVGCQVAKQHVRDGRKE 480
YLVSSSGRCVRDQLCYYHWGRVRSSQVAGGRVSQYTCCAAAPGSVGCQVAKQHVRDGRKE
Sbjct: 421 YLVSSSGRCVRDQLCYYHWGRVRSSQVAGGRVSQYTCCAAAPGSVGCQVAKQHVRDGRKE 480
Query: 481 SLDGFVETFKKELSRDAYPGIYALDCEMCYTTHGLELTRVTVVDADMRVVYDTFVKPDNE 540
SLDGFVETFKKELSRDAYPGIYALDCEMCYTTHGLELTRVTVVDADMRVVYDTFVKPDNE
Sbjct: 481 SLDGFVETFKKELSRDAYPGIYALDCEMCYTTHGLELTRVTVVDADMRVVYDTFVKPDNE 540
Query: 541 IVDYNTRFSGVTEADVAKTSITLPQVQAILLSFFSAQTILIGHSLESDLLALKLIHSTVV 600
IVDYNTRFSGVTEADVAKTSITLPQVQAILLSFFSAQTILIGHSLESDLLALKLIHSTVV
Sbjct: 541 IVDYNTRFSGVTEADVAKTSITLPQVQAILLSFFSAQTILIGHSLESDLLALKLIHSTVV 600
Query: 601 DTAVLFPHYLGFPYKRSLRNLAADYLAQIIQDSQDGHNSSEDANACLQLVMWKVRQRAQI 660
DTAVLFPHYLGFPYKRSLRNLAADYLAQIIQDSQDGHNSSEDANACLQLVMWKVRQRAQI
Sbjct: 601 DTAVLFPHYLGFPYKRSLRNLAADYLAQIIQDSQDGHNSSEDANACLQLVMWKVRQRAQI 660
Query: 661 QPRHRSASPAALACP 675
QPRHRSASPAALACP
Sbjct: 661 QPRHRSASPAALACP 675
>gi|239743600 PREDICTED: hypothetical protein XP_002342902 [Homo
sapiens]
Length = 675
Score = 1373 bits (3554), Expect = 0.0
Identities = 675/675 (100%), Positives = 675/675 (100%)
Query: 1 MLRATAPCWFPPGYPEAKKVAEEAALEASRHLGGEQSQAGAPEGSKMLRATAPCWFRPGY 60
MLRATAPCWFPPGYPEAKKVAEEAALEASRHLGGEQSQAGAPEGSKMLRATAPCWFRPGY
Sbjct: 1 MLRATAPCWFPPGYPEAKKVAEEAALEASRHLGGEQSQAGAPEGSKMLRATAPCWFRPGY 60
Query: 61 PEAKKVAKEAAPEASRHLGAEQSPAGAPEGSKMLRATAPCWFPPGYPEAKKVAEEAALEA 120
PEAKKVAKEAAPEASRHLGAEQSPAGAPEGSKMLRATAPCWFPPGYPEAKKVAEEAALEA
Sbjct: 61 PEAKKVAKEAAPEASRHLGAEQSPAGAPEGSKMLRATAPCWFPPGYPEAKKVAEEAALEA 120
Query: 121 PEFPLPSHQPAQSFGLWVPQMHKQASAFVDIQAEPQNRGPAVPPAWPKMVTESCYFPAQR 180
PEFPLPSHQPAQSFGLWVPQMHKQASAFVDIQAEPQNRGPAVPPAWPKMVTESCYFPAQR
Sbjct: 121 PEFPLPSHQPAQSFGLWVPQMHKQASAFVDIQAEPQNRGPAVPPAWPKMVTESCYFPAQR 180
Query: 181 GSACRLPAAPRLTERPSGVRISAPRKRKTIAHSSSPCLVTGYTDAKRTRVASSSQRSRGS 240
GSACRLPAAPRLTERPSGVRISAPRKRKTIAHSSSPCLVTGYTDAKRTRVASSSQRSRGS
Sbjct: 181 GSACRLPAAPRLTERPSGVRISAPRKRKTIAHSSSPCLVTGYTDAKRTRVASSSQRSRGS 240
Query: 241 KVGRQPGKTRNRSGMACKTTATTSSKRIVRRASLPSLSLKKPIILRSSGCQVPTVLRRGY 300
KVGRQPGKTRNRSGMACKTTATTSSKRIVRRASLPSLSLKKPIILRSSGCQVPTVLRRGY
Sbjct: 241 KVGRQPGKTRNRSGMACKTTATTSSKRIVRRASLPSLSLKKPIILRSSGCQVPTVLRRGY 300
Query: 301 LQLFTEECLKFCASKQEAEEKALNEEKVAYDCSPNKNRYLNVVLNTLKRLKGLTPSSMPG 360
LQLFTEECLKFCASKQEAEEKALNEEKVAYDCSPNKNRYLNVVLNTLKRLKGLTPSSMPG
Sbjct: 301 LQLFTEECLKFCASKQEAEEKALNEEKVAYDCSPNKNRYLNVVLNTLKRLKGLTPSSMPG 360
Query: 361 LSRAALYSRLQEFLLTQDQLKENGYPFPHPERPGGAVLFTGQGKGPGDSSCRVCCRCGTE 420
LSRAALYSRLQEFLLTQDQLKENGYPFPHPERPGGAVLFTGQGKGPGDSSCRVCCRCGTE
Sbjct: 361 LSRAALYSRLQEFLLTQDQLKENGYPFPHPERPGGAVLFTGQGKGPGDSSCRVCCRCGTE 420
Query: 421 YLVSSSGRCVRDQLCYYHWGRVRSSQVAGGRVSQYTCCAAAPGSVGCQVAKQHVRDGRKE 480
YLVSSSGRCVRDQLCYYHWGRVRSSQVAGGRVSQYTCCAAAPGSVGCQVAKQHVRDGRKE
Sbjct: 421 YLVSSSGRCVRDQLCYYHWGRVRSSQVAGGRVSQYTCCAAAPGSVGCQVAKQHVRDGRKE 480
Query: 481 SLDGFVETFKKELSRDAYPGIYALDCEMCYTTHGLELTRVTVVDADMRVVYDTFVKPDNE 540
SLDGFVETFKKELSRDAYPGIYALDCEMCYTTHGLELTRVTVVDADMRVVYDTFVKPDNE
Sbjct: 481 SLDGFVETFKKELSRDAYPGIYALDCEMCYTTHGLELTRVTVVDADMRVVYDTFVKPDNE 540
Query: 541 IVDYNTRFSGVTEADVAKTSITLPQVQAILLSFFSAQTILIGHSLESDLLALKLIHSTVV 600
IVDYNTRFSGVTEADVAKTSITLPQVQAILLSFFSAQTILIGHSLESDLLALKLIHSTVV
Sbjct: 541 IVDYNTRFSGVTEADVAKTSITLPQVQAILLSFFSAQTILIGHSLESDLLALKLIHSTVV 600
Query: 601 DTAVLFPHYLGFPYKRSLRNLAADYLAQIIQDSQDGHNSSEDANACLQLVMWKVRQRAQI 660
DTAVLFPHYLGFPYKRSLRNLAADYLAQIIQDSQDGHNSSEDANACLQLVMWKVRQRAQI
Sbjct: 601 DTAVLFPHYLGFPYKRSLRNLAADYLAQIIQDSQDGHNSSEDANACLQLVMWKVRQRAQI 660
Query: 661 QPRHRSASPAALACP 675
QPRHRSASPAALACP
Sbjct: 661 QPRHRSASPAALACP 675
>gi|239743598 PREDICTED: hypothetical protein XP_002342901 [Homo
sapiens]
Length = 675
Score = 1373 bits (3554), Expect = 0.0
Identities = 675/675 (100%), Positives = 675/675 (100%)
Query: 1 MLRATAPCWFPPGYPEAKKVAEEAALEASRHLGGEQSQAGAPEGSKMLRATAPCWFRPGY 60
MLRATAPCWFPPGYPEAKKVAEEAALEASRHLGGEQSQAGAPEGSKMLRATAPCWFRPGY
Sbjct: 1 MLRATAPCWFPPGYPEAKKVAEEAALEASRHLGGEQSQAGAPEGSKMLRATAPCWFRPGY 60
Query: 61 PEAKKVAKEAAPEASRHLGAEQSPAGAPEGSKMLRATAPCWFPPGYPEAKKVAEEAALEA 120
PEAKKVAKEAAPEASRHLGAEQSPAGAPEGSKMLRATAPCWFPPGYPEAKKVAEEAALEA
Sbjct: 61 PEAKKVAKEAAPEASRHLGAEQSPAGAPEGSKMLRATAPCWFPPGYPEAKKVAEEAALEA 120
Query: 121 PEFPLPSHQPAQSFGLWVPQMHKQASAFVDIQAEPQNRGPAVPPAWPKMVTESCYFPAQR 180
PEFPLPSHQPAQSFGLWVPQMHKQASAFVDIQAEPQNRGPAVPPAWPKMVTESCYFPAQR
Sbjct: 121 PEFPLPSHQPAQSFGLWVPQMHKQASAFVDIQAEPQNRGPAVPPAWPKMVTESCYFPAQR 180
Query: 181 GSACRLPAAPRLTERPSGVRISAPRKRKTIAHSSSPCLVTGYTDAKRTRVASSSQRSRGS 240
GSACRLPAAPRLTERPSGVRISAPRKRKTIAHSSSPCLVTGYTDAKRTRVASSSQRSRGS
Sbjct: 181 GSACRLPAAPRLTERPSGVRISAPRKRKTIAHSSSPCLVTGYTDAKRTRVASSSQRSRGS 240
Query: 241 KVGRQPGKTRNRSGMACKTTATTSSKRIVRRASLPSLSLKKPIILRSSGCQVPTVLRRGY 300
KVGRQPGKTRNRSGMACKTTATTSSKRIVRRASLPSLSLKKPIILRSSGCQVPTVLRRGY
Sbjct: 241 KVGRQPGKTRNRSGMACKTTATTSSKRIVRRASLPSLSLKKPIILRSSGCQVPTVLRRGY 300
Query: 301 LQLFTEECLKFCASKQEAEEKALNEEKVAYDCSPNKNRYLNVVLNTLKRLKGLTPSSMPG 360
LQLFTEECLKFCASKQEAEEKALNEEKVAYDCSPNKNRYLNVVLNTLKRLKGLTPSSMPG
Sbjct: 301 LQLFTEECLKFCASKQEAEEKALNEEKVAYDCSPNKNRYLNVVLNTLKRLKGLTPSSMPG 360
Query: 361 LSRAALYSRLQEFLLTQDQLKENGYPFPHPERPGGAVLFTGQGKGPGDSSCRVCCRCGTE 420
LSRAALYSRLQEFLLTQDQLKENGYPFPHPERPGGAVLFTGQGKGPGDSSCRVCCRCGTE
Sbjct: 361 LSRAALYSRLQEFLLTQDQLKENGYPFPHPERPGGAVLFTGQGKGPGDSSCRVCCRCGTE 420
Query: 421 YLVSSSGRCVRDQLCYYHWGRVRSSQVAGGRVSQYTCCAAAPGSVGCQVAKQHVRDGRKE 480
YLVSSSGRCVRDQLCYYHWGRVRSSQVAGGRVSQYTCCAAAPGSVGCQVAKQHVRDGRKE
Sbjct: 421 YLVSSSGRCVRDQLCYYHWGRVRSSQVAGGRVSQYTCCAAAPGSVGCQVAKQHVRDGRKE 480
Query: 481 SLDGFVETFKKELSRDAYPGIYALDCEMCYTTHGLELTRVTVVDADMRVVYDTFVKPDNE 540
SLDGFVETFKKELSRDAYPGIYALDCEMCYTTHGLELTRVTVVDADMRVVYDTFVKPDNE
Sbjct: 481 SLDGFVETFKKELSRDAYPGIYALDCEMCYTTHGLELTRVTVVDADMRVVYDTFVKPDNE 540
Query: 541 IVDYNTRFSGVTEADVAKTSITLPQVQAILLSFFSAQTILIGHSLESDLLALKLIHSTVV 600
IVDYNTRFSGVTEADVAKTSITLPQVQAILLSFFSAQTILIGHSLESDLLALKLIHSTVV
Sbjct: 541 IVDYNTRFSGVTEADVAKTSITLPQVQAILLSFFSAQTILIGHSLESDLLALKLIHSTVV 600
Query: 601 DTAVLFPHYLGFPYKRSLRNLAADYLAQIIQDSQDGHNSSEDANACLQLVMWKVRQRAQI 660
DTAVLFPHYLGFPYKRSLRNLAADYLAQIIQDSQDGHNSSEDANACLQLVMWKVRQRAQI
Sbjct: 601 DTAVLFPHYLGFPYKRSLRNLAADYLAQIIQDSQDGHNSSEDANACLQLVMWKVRQRAQI 660
Query: 661 QPRHRSASPAALACP 675
QPRHRSASPAALACP
Sbjct: 661 QPRHRSASPAALACP 675
>gi|239743596 PREDICTED: hypothetical protein XP_002342900 [Homo
sapiens]
Length = 675
Score = 1373 bits (3554), Expect = 0.0
Identities = 675/675 (100%), Positives = 675/675 (100%)
Query: 1 MLRATAPCWFPPGYPEAKKVAEEAALEASRHLGGEQSQAGAPEGSKMLRATAPCWFRPGY 60
MLRATAPCWFPPGYPEAKKVAEEAALEASRHLGGEQSQAGAPEGSKMLRATAPCWFRPGY
Sbjct: 1 MLRATAPCWFPPGYPEAKKVAEEAALEASRHLGGEQSQAGAPEGSKMLRATAPCWFRPGY 60
Query: 61 PEAKKVAKEAAPEASRHLGAEQSPAGAPEGSKMLRATAPCWFPPGYPEAKKVAEEAALEA 120
PEAKKVAKEAAPEASRHLGAEQSPAGAPEGSKMLRATAPCWFPPGYPEAKKVAEEAALEA
Sbjct: 61 PEAKKVAKEAAPEASRHLGAEQSPAGAPEGSKMLRATAPCWFPPGYPEAKKVAEEAALEA 120
Query: 121 PEFPLPSHQPAQSFGLWVPQMHKQASAFVDIQAEPQNRGPAVPPAWPKMVTESCYFPAQR 180
PEFPLPSHQPAQSFGLWVPQMHKQASAFVDIQAEPQNRGPAVPPAWPKMVTESCYFPAQR
Sbjct: 121 PEFPLPSHQPAQSFGLWVPQMHKQASAFVDIQAEPQNRGPAVPPAWPKMVTESCYFPAQR 180
Query: 181 GSACRLPAAPRLTERPSGVRISAPRKRKTIAHSSSPCLVTGYTDAKRTRVASSSQRSRGS 240
GSACRLPAAPRLTERPSGVRISAPRKRKTIAHSSSPCLVTGYTDAKRTRVASSSQRSRGS
Sbjct: 181 GSACRLPAAPRLTERPSGVRISAPRKRKTIAHSSSPCLVTGYTDAKRTRVASSSQRSRGS 240
Query: 241 KVGRQPGKTRNRSGMACKTTATTSSKRIVRRASLPSLSLKKPIILRSSGCQVPTVLRRGY 300
KVGRQPGKTRNRSGMACKTTATTSSKRIVRRASLPSLSLKKPIILRSSGCQVPTVLRRGY
Sbjct: 241 KVGRQPGKTRNRSGMACKTTATTSSKRIVRRASLPSLSLKKPIILRSSGCQVPTVLRRGY 300
Query: 301 LQLFTEECLKFCASKQEAEEKALNEEKVAYDCSPNKNRYLNVVLNTLKRLKGLTPSSMPG 360
LQLFTEECLKFCASKQEAEEKALNEEKVAYDCSPNKNRYLNVVLNTLKRLKGLTPSSMPG
Sbjct: 301 LQLFTEECLKFCASKQEAEEKALNEEKVAYDCSPNKNRYLNVVLNTLKRLKGLTPSSMPG 360
Query: 361 LSRAALYSRLQEFLLTQDQLKENGYPFPHPERPGGAVLFTGQGKGPGDSSCRVCCRCGTE 420
LSRAALYSRLQEFLLTQDQLKENGYPFPHPERPGGAVLFTGQGKGPGDSSCRVCCRCGTE
Sbjct: 361 LSRAALYSRLQEFLLTQDQLKENGYPFPHPERPGGAVLFTGQGKGPGDSSCRVCCRCGTE 420
Query: 421 YLVSSSGRCVRDQLCYYHWGRVRSSQVAGGRVSQYTCCAAAPGSVGCQVAKQHVRDGRKE 480
YLVSSSGRCVRDQLCYYHWGRVRSSQVAGGRVSQYTCCAAAPGSVGCQVAKQHVRDGRKE
Sbjct: 421 YLVSSSGRCVRDQLCYYHWGRVRSSQVAGGRVSQYTCCAAAPGSVGCQVAKQHVRDGRKE 480
Query: 481 SLDGFVETFKKELSRDAYPGIYALDCEMCYTTHGLELTRVTVVDADMRVVYDTFVKPDNE 540
SLDGFVETFKKELSRDAYPGIYALDCEMCYTTHGLELTRVTVVDADMRVVYDTFVKPDNE
Sbjct: 481 SLDGFVETFKKELSRDAYPGIYALDCEMCYTTHGLELTRVTVVDADMRVVYDTFVKPDNE 540
Query: 541 IVDYNTRFSGVTEADVAKTSITLPQVQAILLSFFSAQTILIGHSLESDLLALKLIHSTVV 600
IVDYNTRFSGVTEADVAKTSITLPQVQAILLSFFSAQTILIGHSLESDLLALKLIHSTVV
Sbjct: 541 IVDYNTRFSGVTEADVAKTSITLPQVQAILLSFFSAQTILIGHSLESDLLALKLIHSTVV 600
Query: 601 DTAVLFPHYLGFPYKRSLRNLAADYLAQIIQDSQDGHNSSEDANACLQLVMWKVRQRAQI 660
DTAVLFPHYLGFPYKRSLRNLAADYLAQIIQDSQDGHNSSEDANACLQLVMWKVRQRAQI
Sbjct: 601 DTAVLFPHYLGFPYKRSLRNLAADYLAQIIQDSQDGHNSSEDANACLQLVMWKVRQRAQI 660
Query: 661 QPRHRSASPAALACP 675
QPRHRSASPAALACP
Sbjct: 661 QPRHRSASPAALACP 675
>gi|126273519 exonuclease GOR [Homo sapiens]
Length = 675
Score = 1371 bits (3549), Expect = 0.0
Identities = 674/675 (99%), Positives = 675/675 (100%)
Query: 1 MLRATAPCWFPPGYPEAKKVAEEAALEASRHLGGEQSQAGAPEGSKMLRATAPCWFRPGY 60
MLRATAPCWFPPGYPEAKKVAEEAALEASRHLGGEQSQAGAPEGSKMLRATAPCWFRPGY
Sbjct: 1 MLRATAPCWFPPGYPEAKKVAEEAALEASRHLGGEQSQAGAPEGSKMLRATAPCWFRPGY 60
Query: 61 PEAKKVAKEAAPEASRHLGAEQSPAGAPEGSKMLRATAPCWFPPGYPEAKKVAEEAALEA 120
PEAKKVAKEAAPEASRHLGAEQSPAGAPEGSKMLRATAPCWFPPGYPEAKKVAEEAALEA
Sbjct: 61 PEAKKVAKEAAPEASRHLGAEQSPAGAPEGSKMLRATAPCWFPPGYPEAKKVAEEAALEA 120
Query: 121 PEFPLPSHQPAQSFGLWVPQMHKQASAFVDIQAEPQNRGPAVPPAWPKMVTESCYFPAQR 180
PEFPLPSHQPAQSFGLWVPQMHKQASAFVDIQAEPQNRGPAVPPAWPKMVTESCYFPAQR
Sbjct: 121 PEFPLPSHQPAQSFGLWVPQMHKQASAFVDIQAEPQNRGPAVPPAWPKMVTESCYFPAQR 180
Query: 181 GSACRLPAAPRLTERPSGVRISAPRKRKTIAHSSSPCLVTGYTDAKRTRVASSSQRSRGS 240
GSACRLPAAPRLTERPSGVRISAPRKRKTIAHSSSPCLVTGYTDAKRTRVASSSQRSRGS
Sbjct: 181 GSACRLPAAPRLTERPSGVRISAPRKRKTIAHSSSPCLVTGYTDAKRTRVASSSQRSRGS 240
Query: 241 KVGRQPGKTRNRSGMACKTTATTSSKRIVRRASLPSLSLKKPIILRSSGCQVPTVLRRGY 300
KVGRQPGKTRNRSGMACKTTATTSSKRIVRRASLPSLSLKKPIILRSSGCQVPTVLRRGY
Sbjct: 241 KVGRQPGKTRNRSGMACKTTATTSSKRIVRRASLPSLSLKKPIILRSSGCQVPTVLRRGY 300
Query: 301 LQLFTEECLKFCASKQEAEEKALNEEKVAYDCSPNKNRYLNVVLNTLKRLKGLTPSSMPG 360
LQLFTEECLKFCASKQEAEEKALNEEKVAYDCSPNKNRYLNVVLNTLKRLKGLTPSSMPG
Sbjct: 301 LQLFTEECLKFCASKQEAEEKALNEEKVAYDCSPNKNRYLNVVLNTLKRLKGLTPSSMPG 360
Query: 361 LSRAALYSRLQEFLLTQDQLKENGYPFPHPERPGGAVLFTGQGKGPGDSSCRVCCRCGTE 420
LSRAALYSRLQEFLLTQDQLKENGYPFPHPERPGGAVLFTGQGKGPGDSSCRVCCRCGTE
Sbjct: 361 LSRAALYSRLQEFLLTQDQLKENGYPFPHPERPGGAVLFTGQGKGPGDSSCRVCCRCGTE 420
Query: 421 YLVSSSGRCVRDQLCYYHWGRVRSSQVAGGRVSQYTCCAAAPGSVGCQVAKQHVRDGRKE 480
YLVSSSGRCVRDQLCYYHWGRVRSSQVAGGRVSQYTCCAAAPGSVGCQVAKQHVRDGRKE
Sbjct: 421 YLVSSSGRCVRDQLCYYHWGRVRSSQVAGGRVSQYTCCAAAPGSVGCQVAKQHVRDGRKE 480
Query: 481 SLDGFVETFKKELSRDAYPGIYALDCEMCYTTHGLELTRVTVVDADMRVVYDTFVKPDNE 540
SLDGFVETFKKELSRDAYPGIYALDCEMCYTTHGLELTRVTVVDADMRVVYDTFVKPDNE
Sbjct: 481 SLDGFVETFKKELSRDAYPGIYALDCEMCYTTHGLELTRVTVVDADMRVVYDTFVKPDNE 540
Query: 541 IVDYNTRFSGVTEADVAKTSITLPQVQAILLSFFSAQTILIGHSLESDLLALKLIHSTVV 600
IVDYNTRFSGVTEADVAKTSITLPQVQAILLSFFSAQTILIGHSLESDLLALKLIHSTVV
Sbjct: 541 IVDYNTRFSGVTEADVAKTSITLPQVQAILLSFFSAQTILIGHSLESDLLALKLIHSTVV 600
Query: 601 DTAVLFPHYLGFPYKRSLRNLAADYLAQIIQDSQDGHNSSEDANACLQLVMWKVRQRAQI 660
DTAVLFPHYLGFPYKRSLRNLAADYLAQIIQDSQDGHNSSEDA+ACLQLVMWKVRQRAQI
Sbjct: 601 DTAVLFPHYLGFPYKRSLRNLAADYLAQIIQDSQDGHNSSEDASACLQLVMWKVRQRAQI 660
Query: 661 QPRHRSASPAALACP 675
QPRHRSASPAALACP
Sbjct: 661 QPRHRSASPAALACP 675
>gi|239743594 PREDICTED: hypothetical protein XP_002342913, partial
[Homo sapiens]
Length = 552
Score = 1118 bits (2893), Expect = 0.0
Identities = 552/552 (100%), Positives = 552/552 (100%)
Query: 124 PLPSHQPAQSFGLWVPQMHKQASAFVDIQAEPQNRGPAVPPAWPKMVTESCYFPAQRGSA 183
PLPSHQPAQSFGLWVPQMHKQASAFVDIQAEPQNRGPAVPPAWPKMVTESCYFPAQRGSA
Sbjct: 1 PLPSHQPAQSFGLWVPQMHKQASAFVDIQAEPQNRGPAVPPAWPKMVTESCYFPAQRGSA 60
Query: 184 CRLPAAPRLTERPSGVRISAPRKRKTIAHSSSPCLVTGYTDAKRTRVASSSQRSRGSKVG 243
CRLPAAPRLTERPSGVRISAPRKRKTIAHSSSPCLVTGYTDAKRTRVASSSQRSRGSKVG
Sbjct: 61 CRLPAAPRLTERPSGVRISAPRKRKTIAHSSSPCLVTGYTDAKRTRVASSSQRSRGSKVG 120
Query: 244 RQPGKTRNRSGMACKTTATTSSKRIVRRASLPSLSLKKPIILRSSGCQVPTVLRRGYLQL 303
RQPGKTRNRSGMACKTTATTSSKRIVRRASLPSLSLKKPIILRSSGCQVPTVLRRGYLQL
Sbjct: 121 RQPGKTRNRSGMACKTTATTSSKRIVRRASLPSLSLKKPIILRSSGCQVPTVLRRGYLQL 180
Query: 304 FTEECLKFCASKQEAEEKALNEEKVAYDCSPNKNRYLNVVLNTLKRLKGLTPSSMPGLSR 363
FTEECLKFCASKQEAEEKALNEEKVAYDCSPNKNRYLNVVLNTLKRLKGLTPSSMPGLSR
Sbjct: 181 FTEECLKFCASKQEAEEKALNEEKVAYDCSPNKNRYLNVVLNTLKRLKGLTPSSMPGLSR 240
Query: 364 AALYSRLQEFLLTQDQLKENGYPFPHPERPGGAVLFTGQGKGPGDSSCRVCCRCGTEYLV 423
AALYSRLQEFLLTQDQLKENGYPFPHPERPGGAVLFTGQGKGPGDSSCRVCCRCGTEYLV
Sbjct: 241 AALYSRLQEFLLTQDQLKENGYPFPHPERPGGAVLFTGQGKGPGDSSCRVCCRCGTEYLV 300
Query: 424 SSSGRCVRDQLCYYHWGRVRSSQVAGGRVSQYTCCAAAPGSVGCQVAKQHVRDGRKESLD 483
SSSGRCVRDQLCYYHWGRVRSSQVAGGRVSQYTCCAAAPGSVGCQVAKQHVRDGRKESLD
Sbjct: 301 SSSGRCVRDQLCYYHWGRVRSSQVAGGRVSQYTCCAAAPGSVGCQVAKQHVRDGRKESLD 360
Query: 484 GFVETFKKELSRDAYPGIYALDCEMCYTTHGLELTRVTVVDADMRVVYDTFVKPDNEIVD 543
GFVETFKKELSRDAYPGIYALDCEMCYTTHGLELTRVTVVDADMRVVYDTFVKPDNEIVD
Sbjct: 361 GFVETFKKELSRDAYPGIYALDCEMCYTTHGLELTRVTVVDADMRVVYDTFVKPDNEIVD 420
Query: 544 YNTRFSGVTEADVAKTSITLPQVQAILLSFFSAQTILIGHSLESDLLALKLIHSTVVDTA 603
YNTRFSGVTEADVAKTSITLPQVQAILLSFFSAQTILIGHSLESDLLALKLIHSTVVDTA
Sbjct: 421 YNTRFSGVTEADVAKTSITLPQVQAILLSFFSAQTILIGHSLESDLLALKLIHSTVVDTA 480
Query: 604 VLFPHYLGFPYKRSLRNLAADYLAQIIQDSQDGHNSSEDANACLQLVMWKVRQRAQIQPR 663
VLFPHYLGFPYKRSLRNLAADYLAQIIQDSQDGHNSSEDANACLQLVMWKVRQRAQIQPR
Sbjct: 481 VLFPHYLGFPYKRSLRNLAADYLAQIIQDSQDGHNSSEDANACLQLVMWKVRQRAQIQPR 540
Query: 664 HRSASPAALACP 675
HRSASPAALACP
Sbjct: 541 HRSASPAALACP 552
>gi|145199237 transcription elongation factor B polypeptide 3 binding
protein 1 [Homo sapiens]
Length = 1221
Score = 691 bits (1784), Expect = 0.0
Identities = 360/549 (65%), Positives = 408/549 (74%), Gaps = 43/549 (7%)
Query: 152 QAEPQNRGPAVPPAWPKMVTESCYF---PAQRGSACRLPAAPRLTERPSGVRISAPRKRK 208
+ EP RGPAVPPA P E CY AQR SA L A RL E+ V ISAP +++
Sbjct: 672 EVEPPRRGPAVPPARPPTAQEVCYLRAQQAQRASASLLQAPARLAEKSPSVHISAPGEKR 731
Query: 209 TIAHSSSPCLVTGYTDAKRTRVASSSQRSRGSKVGRQPGKTRNRSGMACKTTATTSSKRI 268
IAH +P L T AKRT AS SQ S G + G Q KTR SGMA KTT T KRI
Sbjct: 732 RIAHIPNPRLAAAPTGAKRTLAASGSQSSNGPEPGGQQLKTRTLSGMASKTTTTIIPKRI 791
Query: 269 VRRASLPSLSLKKPIILRSSGCQVPTVLRRGYLQLFTEECLKFCASKQEAEEKALNEEKV 328
SL SL KKPII + G +VPTV+R+ YL LF EECLKFC S QEA EKALNEEKV
Sbjct: 792 AHSPSLQSL--KKPIIPKEFGGKVPTVIRQRYLNLFIEECLKFCTSNQEAIEKALNEEKV 849
Query: 329 AYDCSPNKNRYLNVVLNTLKRLKGLTPSSMPGLSR------------------------- 363
AYD SP+KN YLNV +NTLK+L+GL PS++PGLS+
Sbjct: 850 AYDRSPSKNIYLNVAVNTLKKLRGLAPSAVPGLSKTSGRRVVSHEVVLGGRLAAKTSFSL 909
Query: 364 -------------AALYSRLQEFLLTQDQLKENGYPFPHPERPGGAVLFTGQGKGPGDSS 410
AALYSRL+E+LLTQDQLKENGYPFPHPERPGGA++FT + K P DSS
Sbjct: 910 SRPSSPRVEDLKGAALYSRLREYLLTQDQLKENGYPFPHPERPGGAIIFTAEEKRPKDSS 969
Query: 411 CRVCCRCGTEYLVSSSGRCVRDQLCYYHWGRVRSSQVAGGRVSQYTCCAAAPGSVGCQVA 470
CR CCRCGTEYLVSSSGRC+RD+ CYYHWGR+R ++VAGG +QY CC+AA GSVGCQVA
Sbjct: 970 CRTCCRCGTEYLVSSSGRCIRDEECYYHWGRLRRNRVAGGWETQYMCCSAAAGSVGCQVA 1029
Query: 471 KQHVRDGRKESLDGFVETFKKELSRDAYPGIYALDCEMCYTTHGLELTRVTVVDADMRVV 530
KQHV+DGRKE L+GFV+TF+KELS D +PGIYALDCEM YTT+GLELTRVTVVD D+ VV
Sbjct: 1030 KQHVQDGRKERLEGFVKTFEKELSGDTHPGIYALDCEMSYTTYGLELTRVTVVDTDVHVV 1089
Query: 531 YDTFVKPDNEIVDYNTRFSGVTEADVAKTSITLPQVQAILLSFFSAQTILIGHSLESDLL 590
YDTFVKPDNEIVDYNTRFSGVTEAD+A TS+TL VQA+LLS FSA TILIGHSLESDLL
Sbjct: 1090 YDTFVKPDNEIVDYNTRFSGVTEADLADTSVTLRDVQAVLLSMFSADTILIGHSLESDLL 1149
Query: 591 ALKLIHSTVVDTAVLFPHYLGFPYKRSLRNLAADYLAQIIQDSQDGHNSSEDANACLQLV 650
ALK+IHSTVVDT+VLFPH LG PYKRSLRNL ADYL QIIQD+ DGH+SSEDA AC+ LV
Sbjct: 1150 ALKVIHSTVVDTSVLFPHRLGLPYKRSLRNLMADYLRQIIQDNVDGHSSSEDAGACMHLV 1209
Query: 651 MWKVRQRAQ 659
+WKVR+ A+
Sbjct: 1210 IWKVREDAK 1218
Score = 36.2 bits (82), Expect = 0.10
Identities = 54/253 (21%), Positives = 88/253 (34%), Gaps = 44/253 (17%)
Query: 64 KKVAKEAAPEASRHLGAEQSPAGAPEGSKMLRATAPCWFPPGYPEAKKVAEEAALEAPEF 123
KK A P A+ G PA P + A G P ++ + + +AP
Sbjct: 434 KKKPSSATPVATSGKGRPDRPARRPSPTSGDSRPAA---GRGPPRPLQLPDRKSTKAPSG 490
Query: 124 PLPSHQPA---QSFGLWVPQMHKQASAFVDI---QAEPQNRGPAVPPAWPKMV------- 170
L + + P++ K+A + D+ ++E + GP VP WP +
Sbjct: 491 KLVERKARSLDEGASQDAPKLKKRALSHADLFGDESEDEAAGPGVPSVWPSALPSLSSDS 550
Query: 171 ----TESCYFPAQRGSACRLPAAPRLTERPS------------GVRISAPRKRKTIAHSS 214
S FP +G RL A+P + PS G + K + S
Sbjct: 551 DSDSDSSLGFPEAQGPPKRLKASPPPSPAPSSSSSSSSSTSSAGADVDYSALEKEVDFDS 610
Query: 215 SP---CLVTGYTDAKRTRVASSSQRSRGSKVGRQPGKTR--NRSGMACKTTATTSSKRIV 269
P CL + ++S + ++ RQP K G++ TT KR +
Sbjct: 611 DPMEECL-------RIFNESTSVKTEDRGRLARQPPKEEKSEEKGLSGLTTLFPGQKRRI 663
Query: 270 RRASLPSLSLKKP 282
S ++ P
Sbjct: 664 SHLSKQGQEVEPP 676
>gi|222136615 exonuclease NEF-sp isoform 2 [Homo sapiens]
Length = 743
Score = 108 bits (271), Expect = 1e-23
Identities = 62/153 (40%), Positives = 93/153 (60%), Gaps = 3/153 (1%)
Query: 501 IYALDCEMCYTTHGLELTRVTVVDADMRVVYDTFVKPDNEIVDYNTRFSGVTEADVAKTS 560
++ LDCEMC T+ G ELTR+++V V D VKP+N+I+DY T FSG+T+ + +
Sbjct: 228 LFGLDCEMCLTSKGRELTRISLVAEGGCCVMDELVKPENKILDYLTSFSGITKKILNPVT 287
Query: 561 ITLPQVQAILLSFFSAQTILIGHSLESDLLALKLIHSTVVDTAVLFPHYLGFPYKRSLRN 620
L VQ L + +L+GHSL+ DL ALK+IH V+DT++L+ G +K L+
Sbjct: 288 TKLKDVQRQLKALLPPDAVLVGHSLDLDLRALKMIHPYVIDTSLLYVREQGRRFK--LKF 345
Query: 621 LAADYLAQIIQ-DSQDGHNSSEDANACLQLVMW 652
LA L + IQ + GH+++EDA L+L +
Sbjct: 346 LAKVILGKDIQCPDRLGHDATEDARTILELARY 378
>gi|222136613 exonuclease NEF-sp isoform 1 [Homo sapiens]
Length = 774
Score = 108 bits (271), Expect = 1e-23
Identities = 62/153 (40%), Positives = 93/153 (60%), Gaps = 3/153 (1%)
Query: 501 IYALDCEMCYTTHGLELTRVTVVDADMRVVYDTFVKPDNEIVDYNTRFSGVTEADVAKTS 560
++ LDCEMC T+ G ELTR+++V V D VKP+N+I+DY T FSG+T+ + +
Sbjct: 228 LFGLDCEMCLTSKGRELTRISLVAEGGCCVMDELVKPENKILDYLTSFSGITKKILNPVT 287
Query: 561 ITLPQVQAILLSFFSAQTILIGHSLESDLLALKLIHSTVVDTAVLFPHYLGFPYKRSLRN 620
L VQ L + +L+GHSL+ DL ALK+IH V+DT++L+ G +K L+
Sbjct: 288 TKLKDVQRQLKALLPPDAVLVGHSLDLDLRALKMIHPYVIDTSLLYVREQGRRFK--LKF 345
Query: 621 LAADYLAQIIQ-DSQDGHNSSEDANACLQLVMW 652
LA L + IQ + GH+++EDA L+L +
Sbjct: 346 LAKVILGKDIQCPDRLGHDATEDARTILELARY 378
>gi|194239666 interferon stimulated exonuclease gene 20kDa-like 1
[Homo sapiens]
Length = 325
Score = 80.9 bits (198), Expect = 4e-15
Identities = 56/169 (33%), Positives = 90/169 (53%), Gaps = 18/169 (10%)
Query: 503 ALDCEMCYTT---HGLELTRVTVVDADMRVVYDTFVKPDNEIVDYNTRFSGVTEADVAKT 559
A+DCEM T EL R ++V V+YD +++P+ I DY TR+SG+T + K
Sbjct: 112 AIDCEMVGTGPRGRVSELARCSIVSYHGNVLYDKYIRPEMPIADYRTRWSGITRQHMRK- 170
Query: 560 SITLPQVQAILLSFFSAQTILIGHSLESDLLALKLIH--STVVDTAVLFPHYLGFP---- 613
++ Q +L + +++GH+L +D ALK +H S DT + P++L P
Sbjct: 171 AVPFQVAQKEILKLLKGK-VVVGHALHNDFQALKYVHPRSQTRDTTYV-PNFLSEPGLHT 228
Query: 614 -YKRSLRNLAADYLAQIIQDSQDGHNSSEDANACLQL-----VMWKVRQ 656
+ SL++LA L + IQ Q GH+S EDA ++L V W+ ++
Sbjct: 229 RARVSLKDLALQLLHKKIQVGQHGHSSVEDATTAMELYRLVEVQWEQQE 277
>gi|6857800 interferon stimulated exonuclease [Homo sapiens]
Length = 181
Score = 73.9 bits (180), Expect = 4e-13
Identities = 57/168 (33%), Positives = 86/168 (51%), Gaps = 12/168 (7%)
Query: 501 IYALDCEMCYTTHGLE--LTRVTVVDADMRVVYDTFVKPDNEIVDYNTRFSGVT-EADVA 557
+ A+DCEM E L R ++V+ V+YD F++P+ EI DY TR SGVT + V
Sbjct: 7 VVAMDCEMVGLGPHRESGLARCSLVNVHGAVLYDKFIRPEGEITDYRTRVSGVTPQHMVG 66
Query: 558 KTSITLPQVQAILLSFFSAQTILIGHSLESDLLALK------LIHSTVVDTAVLFPHYLG 611
T + +++ + L +++GH L+ D ALK I+ T D + L
Sbjct: 67 ATPFAVARLEILQL---LKGKLVVGHDLKHDFQALKEDMSGYTIYDTSTDRLLWREAKLD 123
Query: 612 FPYKRSLRNLAADYLAQIIQDSQDGHNSSEDANACLQLVMWKVRQRAQ 659
+ SLR L+ L + IQ+S GH+S EDA A ++L R RA+
Sbjct: 124 HCRRVSLRVLSERLLHKSIQNSLLGHSSVEDARATMELYQISQRIRAR 171
>gi|13569960 interferon stimulated exonuclease gene 20kDa-like 2
[Homo sapiens]
Length = 353
Score = 66.6 bits (161), Expect = 7e-11
Identities = 52/159 (32%), Positives = 81/159 (50%), Gaps = 17/159 (10%)
Query: 503 ALDCEMCYTT---HGLELTRVTVVDADMRVVYDTFVKPDNEIVDYNTRFSGVTEADVAKT 559
A+DCEM T H L R ++V+ + V+YD ++ P IVDY TR+SG+ + +
Sbjct: 181 AIDCEMVGTGPKGHVSSLARCSIVNYNGDVLYDEYILPPCHIVDYRTRWSGIRKQHMVNA 240
Query: 560 S---ITLPQVQAILLSFFSAQTILIGHSLESDLLALKLIH--STVVDTAVLFP--HYLGF 612
+ I Q+ IL I++GH++ +D AL+ H S DT+ + P
Sbjct: 241 TPFKIARGQILKILTG-----KIVVGHAIHNDFKALQYFHPKSLTRDTSHIPPLNRKADC 295
Query: 613 PYK--RSLRNLAADYLAQIIQDSQDGHNSSEDANACLQL 649
P SL++L L + IQ + GH+S EDA A ++L
Sbjct: 296 PENATMSLKHLTKKLLNRDIQVGKSGHSSVEDAQATMEL 334
>gi|76781492 XPMC2 prevents mitotic catastrophe 2 homolog [Homo
sapiens]
Length = 422
Score = 56.2 bits (134), Expect = 9e-08
Identities = 58/197 (29%), Positives = 88/197 (44%), Gaps = 13/197 (6%)
Query: 462 PGSVGCQVAKQHVRDGRKE--SLDGFVE-TFKKELSRDAYPGIYALDCEMCYTTHGLE-- 516
P + + + + RK+ +G V + KE + ALDCEM E
Sbjct: 201 PADIEAAIGPEAAKIARKQLGQSEGSVSLSLVKEQAFGGLTRALALDCEMVGVGPKGEES 260
Query: 517 -LTRVTVVDADMRVVYDTFVKPDNEIVDYNTRFSGVTEADVAKTSITLPQVQAILLSFFS 575
RV++V+ + VYD +VKP + DY T SG+ ++ K L VQ +
Sbjct: 261 MAARVSIVNQYGKCVYDKYVKPTEPVTDYRTAVSGIRPENL-KQGEELEVVQKEVAEMLK 319
Query: 576 AQTILIGHSLESDLLALKLIH--STVVDTAVLFPHYLGFPYKR-SLRNLAADYLAQIIQD 632
+ IL+GH+L +DL L L H + DT P R SLR L+ L +Q
Sbjct: 320 GR-ILVGHALHNDLKVLFLDHPKKKIRDTQKYKPFKSQVKSGRPSLRLLSEKILGLQVQQ 378
Query: 633 SQDGHNSSEDANACLQL 649
++ H S +DA A ++L
Sbjct: 379 AE--HCSIQDAQAAMRL 393
>gi|188536114 PAN2 polyA specific ribonuclease subunit homolog isoform
2 [Homo sapiens]
Length = 1202
Score = 48.1 bits (113), Expect = 3e-05
Identities = 41/127 (32%), Positives = 58/127 (45%), Gaps = 15/127 (11%)
Query: 532 DTFVKPDNEIVDYNTRFSGVTEADV-----AKTSITLPQVQAILLSFFSAQTILIGHSLE 586
D ++ ++VDY T++SG+ D+ +K TL L +GH L+
Sbjct: 1026 DDYISTQEQVVDYLTQYSGIKPGDLDAKISSKHLTTLKSTYLKLRFLIDIGVKFVGHGLQ 1085
Query: 587 SDLLALKLI--HSTVVDTAVLFPHYLGFPYKR--SLRNLAADYLAQIIQDSQDGHNSSED 642
D + L+ V+DT LF P KR SLR LA +L IQ + H+S ED
Sbjct: 1086 KDFRVINLMVPKDQVLDTVYLF----HMPRKRMISLRFLAWYFLDLKIQG--ETHDSIED 1139
Query: 643 ANACLQL 649
A LQL
Sbjct: 1140 ARTALQL 1146
>gi|188536112 PAN2 polyA specific ribonuclease subunit homolog isoform
1 [Homo sapiens]
Length = 1198
Score = 48.1 bits (113), Expect = 3e-05
Identities = 41/127 (32%), Positives = 58/127 (45%), Gaps = 15/127 (11%)
Query: 532 DTFVKPDNEIVDYNTRFSGVTEADV-----AKTSITLPQVQAILLSFFSAQTILIGHSLE 586
D ++ ++VDY T++SG+ D+ +K TL L +GH L+
Sbjct: 1022 DDYISTQEQVVDYLTQYSGIKPGDLDAKISSKHLTTLKSTYLKLRFLIDIGVKFVGHGLQ 1081
Query: 587 SDLLALKLI--HSTVVDTAVLFPHYLGFPYKR--SLRNLAADYLAQIIQDSQDGHNSSED 642
D + L+ V+DT LF P KR SLR LA +L IQ + H+S ED
Sbjct: 1082 KDFRVINLMVPKDQVLDTVYLF----HMPRKRMISLRFLAWYFLDLKIQG--ETHDSIED 1135
Query: 643 ANACLQL 649
A LQL
Sbjct: 1136 ARTALQL 1142
>gi|63252863 BTB (POZ) domain containing 12 [Homo sapiens]
Length = 1834
Score = 43.5 bits (101), Expect = 6e-04
Identities = 112/495 (22%), Positives = 175/495 (35%), Gaps = 75/495 (15%)
Query: 16 EAKKVAEEAALEASRHLGGEQSQAGAPEGSKMLRATAPC-------------WFRPGYPE 62
E +++ E AA + R L E+ AGA E + L +P W + E
Sbjct: 850 EMEEIYEFAATQ--RKLLQEERAAGAGEDADWLEGGSPVSGQLLAGVQVQKQWDKVEEME 907
Query: 63 AKKVAKEAAPEASRHLGAEQSPAGAPEGSKMLRATAPCWFPP----GYPEAKKVAEEAAL 118
+ ++ A +G P + S A AP P G+ + +
Sbjct: 908 PLEPGRDEAATTWEKMGQCALPPPQGQHSGARGAEAPEQEAPEEALGHSSCSSPSRDCQA 967
Query: 119 EAPEFPLPSHQPAQSFGLWVPQMHKQASAFVDIQAEPQNRGPAVPPA----------WPK 168
E E LP A + + S I +EP+ + AV W
Sbjct: 968 ERKEGSLPHSDDAGDYEQLFSSTQGEISEPSQITSEPEEQSGAVRERGLEVSHRLAPWQA 1027
Query: 169 MVTESCYF---PAQRGSACRLPAAPRLTERPSGVRISAPRKRKTIAHSSSPCLVTGYTDA 225
C F P Q GS PR + SG +S PR R + SP L++ +
Sbjct: 1028 SPPHPCRFLLGPPQGGS-------PRGSHHTSGSSLSTPRSRGGTSQVGSPTLLSPAVPS 1080
Query: 226 KRTRVASSSQRSRGSKVGRQPGKTRNRSGMACKTTAT----TSSKRIVRRASLPSLSLKK 281
K+ R S S+ + G Q GK R RS + C+ S I S P S +
Sbjct: 1081 KQKRDRSILTLSK--EPGHQKGKER-RSVLECRNKGVLMFPEKSPSIDLTQSNPDHSSSR 1137
Query: 282 PIILRSSGCQVPTVLRRGYLQLFTEECLKFCASKQEAEEKALNEEKVAYDCSPNKNRYLN 341
S + V+ L L ++E L+ +K ++ EEK A + SP +
Sbjct: 1138 SQKSSSKLNEEDEVI----LLLDSDEELELEQTKMKSISSDPLEEKKALEISPRSCELFS 1193
Query: 342 VVLNTLKRLKGLTPSSMPGLSRAALYSRLQEFLLTQDQLKENGYPFPHPERPGGAVLFTG 401
++ + PS P S A L + L EN R G LF
Sbjct: 1194 IIDVDADQ----EPSQSPPRSEAVLQQE------DEGALPENRGSL---GRRGAPWLFCD 1240
Query: 402 QGKGPGDSSCRVCCRCGTEYLVSSSGRCVRDQLCYYHWGRVRSSQVAGG----RVSQYTC 457
+ P ++S T +LV ++ R + C + + S + G V+Q+T
Sbjct: 1241 RESSPSEAS-----TTDTSWLVPATPLASRSRDCS---SQTQISSLRSGLAVQAVTQHTP 1292
Query: 458 CAAAPGSVGCQVAKQ 472
A+ G +VA++
Sbjct: 1293 RASVGNREGNEVAQK 1307
>gi|239756987 PREDICTED: hypothetical protein XP_002345138 [Homo
sapiens]
Length = 459
Score = 40.4 bits (93), Expect = 0.005
Identities = 36/128 (28%), Positives = 55/128 (42%), Gaps = 7/128 (5%)
Query: 71 APEA--SRHLGAEQSPAGAPEGSKMLRATAPCWFPPGYPEAKKVAEEAALEAP-EFPLPS 127
AP+A ++ A SP G ++ R T P G A E+A AP P P+
Sbjct: 112 APQAFLAQRSPARASPGGGFTSAEGKRKTRPAGRGGGRTRRVVAAPESAAAAPGRSPSPA 171
Query: 128 HQPAQSFGLWVPQMHKQASAFVDIQAEPQNRGPAVPPAWPKMVTESCYFPAQRGSACRLP 187
+ S VP+ + + + +P++ P P A + +++ PA R A R P
Sbjct: 172 DPGSTSSATRVPRARRSSRRAL----QPRHAAPDAPGAPSRSTSQATPPPAPRFPASRRP 227
Query: 188 AAPRLTER 195
APRL R
Sbjct: 228 GAPRLLSR 235
>gi|239746003 PREDICTED: hypothetical protein XP_002344191 [Homo
sapiens]
Length = 459
Score = 40.4 bits (93), Expect = 0.005
Identities = 36/128 (28%), Positives = 55/128 (42%), Gaps = 7/128 (5%)
Query: 71 APEA--SRHLGAEQSPAGAPEGSKMLRATAPCWFPPGYPEAKKVAEEAALEAP-EFPLPS 127
AP+A ++ A SP G ++ R T P G A E+A AP P P+
Sbjct: 112 APQAFLAQRSPARASPGGGFTSAEGKRKTRPAGRGGGRTRRVVAAPESAAAAPGRSPSPA 171
Query: 128 HQPAQSFGLWVPQMHKQASAFVDIQAEPQNRGPAVPPAWPKMVTESCYFPAQRGSACRLP 187
+ S VP+ + + + +P++ P P A + +++ PA R A R P
Sbjct: 172 DPGSTSSATRVPRARRSSRRAL----QPRHAAPDAPGAPSRSTSQATPPPAPRFPASRRP 227
Query: 188 AAPRLTER 195
APRL R
Sbjct: 228 GAPRLLSR 235
>gi|118572613 splicing coactivator subunit SRm300 [Homo sapiens]
Length = 2752
Score = 40.4 bits (93), Expect = 0.005
Identities = 56/237 (23%), Positives = 90/237 (37%), Gaps = 23/237 (9%)
Query: 61 PEAKKVAKEAAPEASRHLGAEQSPAGAPEGSKMLRATAPCWFPPGYPEAKKVAEEAALEA 120
PE K A A P SR + + +PEGS ++ P +P + A + +
Sbjct: 1622 PEPKAPAPRALPRRSRSGSSSKGRGPSPEGSSSTESS------PEHPPKSRTARRGSRSS 1675
Query: 121 PEFPLPSH-QPAQSFGLWVPQMHKQA---SAFVDIQAEPQNRGPAVPPAWPKMVTESCYF 176
PE S P + P++ ++A + P+ R PP + + S
Sbjct: 1676 PEPKTKSRTPPRRRSSRSSPELTRKARLSRRSRSASSSPETRS-RTPPRHRRSPSVSSPE 1734
Query: 177 PAQRGSAC---RLPAAPRLTERPSGVRISAPRKRKTIAHSSSPCLVTGYTDAKRTRVASS 233
PA++ + R ++PR R +P+ R S T +R R SS
Sbjct: 1735 PAEKSRSSRRRRSASSPRTKTTSRRGRSPSPKPRGLQRSRSRSRREKTRTTRRRDRSGSS 1794
Query: 234 SQRSRGSKVGRQPGK-TRNRSG--------MACKTTATTSSKRIVRRASLPSLSLKK 281
SR + R + TR R G A + ++ TSS+R R+ P S K+
Sbjct: 1795 QSTSRRRQRSRSRSRVTRRRRGGSGYHSRSPARQESSRTSSRRRRGRSRTPPTSRKR 1851
Score = 31.6 bits (70), Expect = 2.5
Identities = 62/244 (25%), Positives = 87/244 (35%), Gaps = 57/244 (23%)
Query: 44 GSKMLRATAPCWFRPGYPEAKKVAKEAAPEASRHLGAEQSPAGAPEGSKMLRATAPCWFP 103
GS AT P P P + EA+P R SP +PE K+ ++++ P
Sbjct: 376 GSPQPLATTPLSQEPVNPPS-----EASPTRDR------SPPKSPE--KLPQSSSSESSP 422
Query: 104 PGYPEAKKVAEEAALEAPEFPLP-----SHQPAQSFGLWVPQMHKQASAFVDIQAEPQNR 158
P P+ KV+ A+ +PE P P SH+ S + H +A P R
Sbjct: 423 PS-PQPTKVSRHAS-SSPESPKPAPAPGSHREISSSPTSKNRSHGRAKRDKSHSHTPSRR 480
Query: 159 -GPAVPPAWPKMVTESCYFPAQRG-SACRLPAAPRLTERPSGVRISAPRKR--------- 207
G + PA K P +RG S R P R R +P++R
Sbjct: 481 MGRSRSPATAKRGRSRSRTPTKRGHSRSRSPQWRRSRSAQRWGRSRSPQRRGRSRSPQRP 540
Query: 208 ------------------KTIAHSSSPCLVTGYTDAKRTRVASSSQRSRGSKVGRQPGKT 249
+ +HS SP A R R S + RG R P +
Sbjct: 541 GWSRSRNTQRRGRSRSARRGRSHSRSP--------ATRGRSRSRTPARRGRSRSRTPARR 592
Query: 250 RNRS 253
R+RS
Sbjct: 593 RSRS 596
Score = 30.8 bits (68), Expect = 4.3
Identities = 48/202 (23%), Positives = 71/202 (35%), Gaps = 39/202 (19%)
Query: 64 KKVAKEAAPEASRHLGAEQSPAGAP------EGSKMLRATAPCWFPPGYP--EAKKVAEE 115
+K A +P R + PA P GS AT P P P EA +
Sbjct: 344 EKSATRPSPSPERSSTGPEPPAPTPLLAERHGGSPQPLATTPLSQEPVNPPSEASPTRDR 403
Query: 116 AALEAPEFPLPSHQPAQSFGLWVPQMHKQASAFVDIQAEPQNRGPAVPPAWPKMVTESCY 175
+ ++PE LP ++S P + + P++ PA P
Sbjct: 404 SPPKSPE-KLPQSSSSESS----PPSPQPTKVSRHASSSPESPKPAPAP----------- 447
Query: 176 FPAQRGSACRLPAAPRLTERPSGVRISAPRKRKTIAHSSSPCLVTGYT----DAKRTRVA 231
GS + ++P R G R ++ +HS +P G + AKR R
Sbjct: 448 -----GSHREISSSPTSKNRSHG------RAKRDKSHSHTPSRRMGRSRSPATAKRGRSR 496
Query: 232 SSSQRSRGSKVGRQPGKTRNRS 253
S + RG R P R+RS
Sbjct: 497 SRTPTKRGHSRSRSPQWRRSRS 518
Score = 30.8 bits (68), Expect = 4.3
Identities = 67/296 (22%), Positives = 109/296 (36%), Gaps = 43/296 (14%)
Query: 15 PEAKKVAEEAALEASRHLGGEQSQAGAPEGSKMLRATAPCWFRPGYPEAKKVAK---EAA 71
PE K A A SR + + +PEGS ++ P +P + A+ ++
Sbjct: 1622 PEPKAPAPRALPRRSRSGSSSKGRGPSPEGSSSTESS------PEHPPKSRTARRGSRSS 1675
Query: 72 PE---ASRHLGAEQSPAGAPEGSKMLRATAPCWFPPGYPEAKKVAEEAALEAPEFPLPSH 128
PE SR +S +PE ++ R + PE + +P P
Sbjct: 1676 PEPKTKSRTPPRRRSSRSSPELTRKARLSRRSRSASSSPETRSRTPPRHRRSPSVSSP-- 1733
Query: 129 QPAQSFGLWVPQMHKQASAFVDIQAEPQNRGPAVPP-----AWPKMVTESCYFPAQRGSA 183
+PA+ + + AS+ + R P+ P + + E +R +
Sbjct: 1734 EPAEKSR--SSRRRRSASSPRTKTTSRRGRSPSPKPRGLQRSRSRSRREKTRTTRRRDRS 1791
Query: 184 CRLPAAPRLTERP-SGVRISAPRKRKTIAHSSSPCLVTGYTDAKRTRVASSSQRSRGSKV 242
+ R +R S R++ R+ + HS SP A++ +SS+R RG
Sbjct: 1792 GSSQSTSRRRQRSRSRSRVTRRRRGGSGYHSRSP--------ARQESSRTSSRRRRGR-- 1841
Query: 243 GRQPGKTRNRSGMACKTTATTSSKRIVRRASLPSLSLKKPIILRSSGCQVPTVLRR 298
R P +R RS T+ KR RAS P R S + P + RR
Sbjct: 1842 SRTPPTSRKRSR---SRTSPAPWKRSRSRAS--------PATHRRSRSRTPLISRR 1886
Score = 30.4 bits (67), Expect = 5.6
Identities = 44/156 (28%), Positives = 59/156 (37%), Gaps = 19/156 (12%)
Query: 177 PAQRG-SACRLPAAPRLTERPSGVRISAPRKRKTIAHSSSPCLVTGY----TDAKRTRVA 231
PA+RG S R PA R R +P +R++ S SP +G T A+R R
Sbjct: 609 PARRGRSRSRTPARRRSRTR-------SPVRRRS--RSRSPARRSGRSRSRTPARRGRSR 659
Query: 232 SSSQRSRGSKVGRQPGKTRNRSGMACKTTATTSSKRIVRRASLPSLSLKKPIILRSSGCQ 291
S + RG R P + RS S R RR S SL +R
Sbjct: 660 SRTPARRGRSRSRTPARRSGRSRSRTPARRGRSRSRTPRRGRSRSRSL-----VRRGRSH 714
Query: 292 VPTVLRRGYLQLFTEECLKFCASKQEAEEKALNEEK 327
T RRG +E K S++ + + E K
Sbjct: 715 SRTPQRRGRSGSSSERKNKSRTSQRRSRSNSSPEMK 750
Score = 30.4 bits (67), Expect = 5.6
Identities = 52/242 (21%), Positives = 85/242 (35%), Gaps = 27/242 (11%)
Query: 11 PPGYPEAKKVAEEAALEASRHLGGEQSQAGAPEGSKMLRATAPCWFRPGYPEAKKVAKEA 70
PP P ++ E A S +G SQ+ P R+ P F +++ + +
Sbjct: 2410 PPSAPSQSRMTSERAPSPSSRMGQAPSQSLLPPAQDQPRSPVPSAFSD---QSRCLIAQT 2466
Query: 71 APEA------SRHLGAEQSPAGAPEGSKMLRATAP------CWFPPGYPEAKKVAEEAAL 118
P A S + S AG G ML AP PP A++ + AAL
Sbjct: 2467 TPVAGSQSLSSGAVATTTSSAGDHNG--MLSVPAPGVPHSDVGEPPASTGAQQPSALAAL 2524
Query: 119 EAPEFPLPSHQPAQSFGLWVPQMHKQASAFVDIQAEPQNRGPAVPPAWPKMVTESCYFPA 178
+ + S + S +S+ + + G ++P P++ + P
Sbjct: 2525 QPAKERRSSSSSSSSSSSSSSSSSSSSSSSSSGSSSSDSEGSSLP-VQPEVALKRVPSPT 2583
Query: 179 QRGSACRLPAAPRLTERPSGVRISAPRKRKTIAHSSSPCLVTGYTDAKRTRVASSSQRSR 238
AP+ R P KRK + SSS + + + + +SSS S
Sbjct: 2584 P---------APKEAVREGRPPEPTPAKRKRRSSSSSSSSSSSSSSSSSSSSSSSSSSSS 2634
Query: 239 GS 240
S
Sbjct: 2635 SS 2636
>gi|163965366 nascent polypeptide-associated complex alpha subunit
isoform a [Homo sapiens]
Length = 2078
Score = 39.7 bits (91), Expect = 0.009
Identities = 71/293 (24%), Positives = 99/293 (33%), Gaps = 34/293 (11%)
Query: 4 ATAPCWFPPGYPEAKKVAEEAALEASRHLGGEQSQAGAPEGSKMLRATAPCWFRPGYPEA 63
AT P P P A + + L H G P K AT+P P P A
Sbjct: 1256 ATPPPKGAPTPPAATPPSLKGGLATPPHKGAPNPAVVTPPSPKGGPATSPPKGAPTPPAA 1315
Query: 64 KKVAKEAAPEASRHLGAEQSPA---GAPEGSKMLRATAPCWFPPGYPEAKKVAEEAALEA 120
+ + +P GA PA +P+G+ L AT P G P E
Sbjct: 1316 TPPSPKGSPGTPPPKGAPTPPAVTPPSPKGTPTLPATTPS--SKGGPTTPSSKEG---PT 1370
Query: 121 PEFPLPSHQPAQSFGLWVPQMHKQASAFVDIQAEPQNRGPAVPPAWPKMVTESCYFPAQR 180
P PSH+ + P K+ A + +P + PAV P PK + P R
Sbjct: 1371 PPAATPSHKGGPAM---TPPSPKRGPAIPSPKGDPTS--PAVIPLSPKKAPAT---PVTR 1422
Query: 181 GSACRLPAAPRLTERPSGVRISAPRKRKTIAHSSSPCLVTGYTDAKRTRVASSSQRSRGS 240
A P+ LT P+ +S + T A P + D V S
Sbjct: 1423 EGAA-TPSKGDLTP-PAVTPVSLKKAPATSAPKGGPATPSSKGDPTLPAVTPPSP----- 1475
Query: 241 KVGRQPGKTRNRSGMACKTTATTSSKRIVRRASLPSLSLKKPIILRSSGCQVP 293
+ A K AT+SS + P + P ++ SS +VP
Sbjct: 1476 -----------KEPPAPKQVATSSSPKKAPATPAPMGAPTLPAVIPSSPKEVP 1517
Score = 33.1 bits (74), Expect = 0.86
Identities = 28/94 (29%), Positives = 33/94 (35%), Gaps = 2/94 (2%)
Query: 74 ASRHLGAEQSPAGAPEGSKM--LRATAPCWFPPGYPEAKKVAEEAALEAPEFPLPSHQPA 131
A+ H SP GAP S + L P P V E P P P PA
Sbjct: 851 ATTHSPTPPSPKGAPTPSAVTPLSPKGVTLPPKETPTPSVVNLPFPKEGPATPAPKQAPA 910
Query: 132 QSFGLWVPQMHKQASAFVDIQAEPQNRGPAVPPA 165
S P+ + A I A P +G PPA
Sbjct: 911 LSMTSSSPKKARATPAPKGIPASPSPKGAPTPPA 944
Score = 32.3 bits (72), Expect = 1.5
Identities = 40/159 (25%), Positives = 52/159 (32%), Gaps = 8/159 (5%)
Query: 12 PGYPEAKKVAEEAALEASRHLGGEQSQAGAPEGSKMLRATAPCWFRPGYPEAKKVAKEAA 71
P P A + + L H G + A P K AT P P P A + +
Sbjct: 1103 PMPPAATPPSPKGGLATPPHKGAPTTPAATPPSPKGGLATPPPKGAPTTPAATPPSPKGG 1162
Query: 72 PEASRHLGAEQSPAGAPEGSKMLRATAPCWFPPGYPEAKKVAEEAALE------APEFPL 125
GA +PA P K AT P P A + + L AP P
Sbjct: 1163 LATPPPKGAPTTPAATPPSPKGGLATPSPKGAPTTPAATPPSPKGGLATPSPKGAPTTPA 1222
Query: 126 PSHQPAQSFGLWVPQMHKQASAFVDIQAEPQNRGPAVPP 164
+ P+ GL P + P+ GPA PP
Sbjct: 1223 AT-PPSPKGGLATPSPKGAPTTPAATPPSPKG-GPATPP 1259
Score = 31.2 bits (69), Expect = 3.3
Identities = 48/213 (22%), Positives = 66/213 (30%), Gaps = 13/213 (6%)
Query: 4 ATAPCWFPPGYPEAKKVAEEAALEASRHLGGEQSQAGAPEGSKMLRATAPCWFRPGYPEA 63
AT P P P A + + L G + A P K AT P P P A
Sbjct: 1118 ATPPHKGAPTTPAATPPSPKGGLATPPPKGAPTTPAATPPSPKGGLATPPPKGAPTTPAA 1177
Query: 64 KKVAKEAAPEASRHLGAEQSPAGAPEGSKMLRATAPCWFPPGYPEAKKVAEEAALEAPEF 123
+ + GA +PA P K AT P P A + + L
Sbjct: 1178 TPPSPKGGLATPSPKGAPTTPAATPPSPKGGLATPSPKGAPTTPAATPPSPKGGLAT--- 1234
Query: 124 PLPSHQPAQSFGLWVPQMHKQASAFVDIQAEPQNRGPAVPPAWPKMVTESCYFPAQRGSA 183
PS + A + P K A P P P A P + P +G+
Sbjct: 1235 --PSPKGAPTTPAATPPSPKGGPA-----TPPPKGAPTPPAATPPSLKGGLATPPHKGAP 1287
Query: 184 CRLPAAPRLTERPSGVRISAPRKRKTIAHSSSP 216
P P G ++P K +++P
Sbjct: 1288 NPAVVTP---PSPKGGPATSPPKGAPTPPAATP 1317
Score = 29.6 bits (65), Expect = 9.5
Identities = 49/213 (23%), Positives = 66/213 (30%), Gaps = 24/213 (11%)
Query: 4 ATAPCWFPPGYPEAKKVAEEAALEASRHLGGEQSQAGAPEGSKMLRATAPCWFRPGYPEA 63
AT P P G P A + + A + L S G P + A P P A
Sbjct: 1038 ATPPS--PKGSPAATPLPKGAPTTPAATL---PSPKGGPATPSLKGAPTP-------PAA 1085
Query: 64 KKVAKEAAPEASRHLGAEQSPAGAPEGSKMLRATAPCWFPPGYPEAKKVAEEAALEAPEF 123
+ + P GA PA P K AT P P P A + + L P
Sbjct: 1086 TPPSPKGGPATPSPKGAPMPPAATPPSPKGGLATPPHKGAPTTPAATPPSPKGGLATPPP 1145
Query: 124 PLPSHQPAQSFGLWVPQMHKQASAFVDIQAEPQNRGPAVPPAWPKMVTESCYFPAQRGSA 183
PA + P K A P P P A P P+ +G+
Sbjct: 1146 KGAPTTPAAT-----PPSPKGGLA-----TPPPKGAPTTPAATPPSPKGGLATPSPKGAP 1195
Query: 184 CRLPAAPRLTERPSGVRISAPRKRKTIAHSSSP 216
A P G+ +P+ T ++ P
Sbjct: 1196 TTPAATP--PSPKGGLATPSPKGAPTTPAATPP 1226
>gi|148762969 myeloid/lymphoid or mixed-lineage leukemia 2 [Homo
sapiens]
Length = 5537
Score = 37.0 bits (84), Expect = 0.060
Identities = 46/181 (25%), Positives = 65/181 (35%), Gaps = 8/181 (4%)
Query: 27 EASRHLGGEQSQAGAPEGSKMLRATAPCWFRPGYPEAKKVAKEAAPEASRHLGAEQSPAG 86
EASR L + A + L + P P P ++ PE+S E+SP
Sbjct: 463 EASR-LSPPPEELPASPLPEALHLSRPLEESPLSPPPEESPLSPPPESSPFSPLEESPLS 521
Query: 87 APEGSKMLRATAPCWFPPGYPEAKKVA---EEAALEAPEFPLPSHQPAQSFGLWVPQMHK 143
PE S A PP PEA ++ EE+ L P LP+ P ++ L P
Sbjct: 522 PPEESPPSPALETPLSPP--PEASPLSPPFEESPLSPPPEELPTSPPPEASRLSPPPEES 579
Query: 144 QASAFVDIQAEPQNRGPAVPPAWPKMVTESCYFPAQRGSACRLPAAPRLTERPSGVRISA 203
S + P + P +P P + P A RL+ P +S
Sbjct: 580 PMSP--PPEESPMSPPPEASRLFPPFEESPLSPPPEESPLSPPPEASRLSPPPEDSPMSP 637
Query: 204 P 204
P
Sbjct: 638 P 638
>gi|122937321 UNC homeobox [Homo sapiens]
Length = 531
Score = 36.6 bits (83), Expect = 0.078
Identities = 42/163 (25%), Positives = 58/163 (35%), Gaps = 9/163 (5%)
Query: 5 TAPCWFPPGYPEAKKVAEEAALEASRHLGGEQSQAGAPEGSKMLRATAPCWFRPGYPEAK 64
TAP PPG P A + A + R G Q + G P K + P
Sbjct: 267 TAPA--PPGEPPAPGTCDPAFYPSQRSGAGPQPRPGRP-ADKDAASCGPGAAVAAVERGA 323
Query: 65 KVAKEAAPEASRHLGAEQSPAGAPEGSKMLRATAPCWFPPGYPEAKKVAEEAALEAPEFP 124
+A+P + L ++ P + A A F PG P A + F
Sbjct: 324 AGLPKASPFSVESLLSDSPPRRKAASNAAAAAAAGLDFAPGLP----CAPRTLIGKGHFL 379
Query: 125 LPSHQPAQSFGLWVPQMHKQASAFVDIQAEPQNRGPAVPPAWP 167
L + Q G VPQ + A ++ + PAVPPA P
Sbjct: 380 L--YPITQPLGFLVPQAALKGGAGLEPAPKDAPPAPAVPPAPP 420
>gi|38026934 Rho guanine nucleotide exchange factor (GEF) 11 isoform
2 [Homo sapiens]
Length = 1562
Score = 36.2 bits (82), Expect = 0.10
Identities = 26/102 (25%), Positives = 43/102 (42%), Gaps = 15/102 (14%)
Query: 33 GGEQSQAGAPEGSKMLRATAPCWFRPGYPEAKKVAKEAAPEASRHLGA------------ 80
GG +AG EG ++++ + E K+ K A A LG+
Sbjct: 75 GGAAMKAGVKEGDRIIKVNGTMVTNSSHLEVVKLIKSGAYVALTLLGSSPSSMGISGLQQ 134
Query: 81 EQSPAGAPEGSKMLRATAPCWFPPGYPEAKKVAEEAALEAPE 122
+ SPAGAP + ++ + P PP P +++ L+ PE
Sbjct: 135 DPSPAGAPRITSVIPSPPP---PPPLPPPQRITGPKPLQDPE 173
>gi|7662086 Rho guanine nucleotide exchange factor (GEF) 11 isoform
1 [Homo sapiens]
Length = 1522
Score = 36.2 bits (82), Expect = 0.10
Identities = 26/102 (25%), Positives = 43/102 (42%), Gaps = 15/102 (14%)
Query: 33 GGEQSQAGAPEGSKMLRATAPCWFRPGYPEAKKVAKEAAPEASRHLGA------------ 80
GG +AG EG ++++ + E K+ K A A LG+
Sbjct: 75 GGAAMKAGVKEGDRIIKVNGTMVTNSSHLEVVKLIKSGAYVALTLLGSSPSSMGISGLQQ 134
Query: 81 EQSPAGAPEGSKMLRATAPCWFPPGYPEAKKVAEEAALEAPE 122
+ SPAGAP + ++ + P PP P +++ L+ PE
Sbjct: 135 DPSPAGAPRITSVIPSPPP---PPPLPPPQRITGPKPLQDPE 173
>gi|37693995 Kruppel-like factor 13 [Homo sapiens]
Length = 288
Score = 35.4 bits (80), Expect = 0.17
Identities = 23/60 (38%), Positives = 28/60 (46%), Gaps = 5/60 (8%)
Query: 81 EQSPAGAP----EGSKMLRATAPCWFPPGYPEAKKVAEEAALEAPEFPLPSHQPAQSFGL 136
+Q+PA AP EG+ +A PC PP PE E A AP P S +P GL
Sbjct: 73 QQAPAPAPAERREGAAARKARTPCRLPPPAPEPTSPGAEGAAAAPPSPAWS-EPEPEAGL 131
>gi|148833506 obscurin, cytoskeletal calmodulin and titin-interacting
RhoGEF isoform b [Homo sapiens]
Length = 7968
Score = 35.0 bits (79), Expect = 0.23
Identities = 73/279 (26%), Positives = 102/279 (36%), Gaps = 54/279 (19%)
Query: 16 EAKKVAEEAALEASRHLGGEQSQAGAPEGSKMLRATAP-CWFRPGY--------PEAKKV 66
E + + EEAA E L A AP LR A PG+ P +
Sbjct: 6920 EHRVLEEEAAREEQATL-----LAKAPSFETALRLPASGTHLAPGHSHSLEHDSPSTPRP 6974
Query: 67 AKEAAPEASRHLGAEQSPA-----GAPEGSKMLRATAPCWFPPGYPEAKKVAEEAALEAP 121
+ EA EA R A A G P+GSK L +T G+P A E P
Sbjct: 6975 SSEACGEAQRLPSAPSGGAPIRDMGHPQGSKQLPSTG------GHPGT------AQPERP 7022
Query: 122 EFPLPSHQPAQSFGLWVPQMH-KQASAFVDIQAEPQNRGPAVPPAWPK-------MVTES 173
P QPA P H KQ SA + + P P ++P +V S
Sbjct: 7023 SPDSPWGQPA-------PFCHPKQGSAPQEGCSPHPAVAPCPPGSFPPGSCKEAPLVPSS 7075
Query: 174 CYFPAQRGSACRLPAAPRLTERPSGVRISAPRKRKTIAHSSSPCLVTGY-TDAKRTRVAS 232
+ + A+P L + IS P + K PC G + A ++V
Sbjct: 7076 PFLGQPQAPPAPAKASPPLDSKMGPGDISLPGRPKP-----GPCSSPGSASQASSSQV-- 7128
Query: 233 SSQRSRGSKVGRQPGKTRNRSGMACKTTATTSSKRIVRR 271
SS R S+VG +PG + + G + + S ++R
Sbjct: 7129 SSLRVGSSQVGTEPGPSLDAEGWTQEAEDLSDSTPTLQR 7167
Score = 30.0 bits (66), Expect = 7.3
Identities = 33/116 (28%), Positives = 43/116 (37%), Gaps = 11/116 (9%)
Query: 15 PEAKKVAEEAALEASRHLGGEQSQAGAPEGSKMLRATA--PCWFRPGYPEAKKVAKEAAP 72
P ++ E L ++ G G P+GSK L +T P +P P + AP
Sbjct: 6974 PSSEACGEAQRLPSAPSGGAPIRDMGHPQGSKQLPSTGGHPGTAQPERPSPDSPWGQPAP 7033
Query: 73 EASRHLGAEQSPAGAPEGSKMLRATAPC---WFPPG-YPEAKKVAEEAALEAPEFP 124
G + EG A APC FPPG EA V L P+ P
Sbjct: 7034 FCHPKQG-----SAPQEGCSPHPAVAPCPPGSFPPGSCKEAPLVPSSPFLGQPQAP 7084
>gi|14602439 Williams Beuren syndrome chromosome region 14 isoform
delta [Homo sapiens]
Length = 831
Score = 34.7 bits (78), Expect = 0.30
Identities = 42/156 (26%), Positives = 55/156 (35%), Gaps = 22/156 (14%)
Query: 99 PCWFPPGYPEAKKVA--EEAALEAPEFPLPSHQPAQSFGLWVPQMHKQASAFVDIQAEPQ 156
PC PP P A A +E L +P FP P+ PA A PQ
Sbjct: 409 PCPPPPFPPMAPPTALLQEEPLFSPRFPFPTVPPAPGV--------SPLPAPAAFPPTPQ 460
Query: 157 NRGPAVPPAWPKMVTESCYFPAQRGSACRLPAAPRLTERPSGVRISAP------RKRKTI 210
+ P +P + Y G +P P G + S P T
Sbjct: 461 SVPSPAPTPFPIELLPLGYSEPAFGPCFSMPRGKPPAPSPRGQKASPPTLAPATASPPTT 520
Query: 211 AHSSSPCLVTGYTDAKRTR------VASSSQRSRGS 240
A S++PCL T AK + V+S+ RS GS
Sbjct: 521 AGSNNPCLTQLLTAAKPEQALEPPLVSSTLLRSPGS 556
>gi|14602437 Williams Beuren syndrome chromosome region 14 isoform
gamma [Homo sapiens]
Length = 850
Score = 34.7 bits (78), Expect = 0.30
Identities = 42/156 (26%), Positives = 55/156 (35%), Gaps = 22/156 (14%)
Query: 99 PCWFPPGYPEAKKVA--EEAALEAPEFPLPSHQPAQSFGLWVPQMHKQASAFVDIQAEPQ 156
PC PP P A A +E L +P FP P+ PA A PQ
Sbjct: 409 PCPPPPFPPMAPPTALLQEEPLFSPRFPFPTVPPAPGV--------SPLPAPAAFPPTPQ 460
Query: 157 NRGPAVPPAWPKMVTESCYFPAQRGSACRLPAAPRLTERPSGVRISAP------RKRKTI 210
+ P +P + Y G +P P G + S P T
Sbjct: 461 SVPSPAPTPFPIELLPLGYSEPAFGPCFSMPRGKPPAPSPRGQKASPPTLAPATASPPTT 520
Query: 211 AHSSSPCLVTGYTDAKRTR------VASSSQRSRGS 240
A S++PCL T AK + V+S+ RS GS
Sbjct: 521 AGSNNPCLTQLLTAAKPEQALEPPLVSSTLLRSPGS 556
>gi|14602435 Williams Beuren syndrome chromosome region 14 isoform
beta [Homo sapiens]
Length = 833
Score = 34.7 bits (78), Expect = 0.30
Identities = 42/156 (26%), Positives = 55/156 (35%), Gaps = 22/156 (14%)
Query: 99 PCWFPPGYPEAKKVA--EEAALEAPEFPLPSHQPAQSFGLWVPQMHKQASAFVDIQAEPQ 156
PC PP P A A +E L +P FP P+ PA A PQ
Sbjct: 409 PCPPPPFPPMAPPTALLQEEPLFSPRFPFPTVPPAPGV--------SPLPAPAAFPPTPQ 460
Query: 157 NRGPAVPPAWPKMVTESCYFPAQRGSACRLPAAPRLTERPSGVRISAP------RKRKTI 210
+ P +P + Y G +P P G + S P T
Sbjct: 461 SVPSPAPTPFPIELLPLGYSEPAFGPCFSMPRGKPPAPSPRGQKASPPTLAPATASPPTT 520
Query: 211 AHSSSPCLVTGYTDAKRTR------VASSSQRSRGS 240
A S++PCL T AK + V+S+ RS GS
Sbjct: 521 AGSNNPCLTQLLTAAKPEQALEPPLVSSTLLRSPGS 556
>gi|14602433 Williams Beuren syndrome chromosome region 14 isoform
alpha [Homo sapiens]
Length = 852
Score = 34.7 bits (78), Expect = 0.30
Identities = 42/156 (26%), Positives = 55/156 (35%), Gaps = 22/156 (14%)
Query: 99 PCWFPPGYPEAKKVA--EEAALEAPEFPLPSHQPAQSFGLWVPQMHKQASAFVDIQAEPQ 156
PC PP P A A +E L +P FP P+ PA A PQ
Sbjct: 409 PCPPPPFPPMAPPTALLQEEPLFSPRFPFPTVPPAPGV--------SPLPAPAAFPPTPQ 460
Query: 157 NRGPAVPPAWPKMVTESCYFPAQRGSACRLPAAPRLTERPSGVRISAP------RKRKTI 210
+ P +P + Y G +P P G + S P T
Sbjct: 461 SVPSPAPTPFPIELLPLGYSEPAFGPCFSMPRGKPPAPSPRGQKASPPTLAPATASPPTT 520
Query: 211 AHSSSPCLVTGYTDAKRTR------VASSSQRSRGS 240
A S++PCL T AK + V+S+ RS GS
Sbjct: 521 AGSNNPCLTQLLTAAKPEQALEPPLVSSTLLRSPGS 556
Database: hs.faa
Posted date: Aug 4, 2009 4:42 PM
Number of letters in database: 18,247,518
Number of sequences in database: 37,866
Lambda K H
0.318 0.131 0.401
Gapped
Lambda K H
0.267 0.0410 0.140
Matrix: BLOSUM62
Gap Penalties: Existence: 11, Extension: 1
Number of Hits to DB: 28,268,932
Number of Sequences: 37866
Number of extensions: 1454005
Number of successful extensions: 5213
Number of sequences better than 10.0: 30
Number of HSP's better than 10.0 without gapping: 18
Number of HSP's successfully gapped in prelim test: 98
Number of HSP's that attempted gapping in prelim test: 5043
Number of HSP's gapped (non-prelim): 242
length of query: 675
length of database: 18,247,518
effective HSP length: 109
effective length of query: 566
effective length of database: 14,120,124
effective search space: 7991990184
effective search space used: 7991990184
T: 11
A: 40
X1: 16 ( 7.3 bits)
X2: 38 (14.6 bits)
X3: 64 (24.7 bits)
S1: 41 (21.7 bits)
S2: 65 (29.6 bits)
Search results were obtained with NCBI BLAST and RefSeq entries.
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Guide to the Human Genome
Copyright © 2010 by Stewart Scherer. All rights reserved.