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Search of human proteins with 239743362
BLASTP 2.2.11 [Jun-05-2005]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= gi|239743362 PREDICTED: hypothetical protein XP_002342841 [Homo
sapiens]
(229 letters)
Database: hs.faa
37,866 sequences; 18,247,518 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
gi|239754717 PREDICTED: hypothetical protein [Homo sapiens] 464 e-131
gi|239749265 PREDICTED: hypothetical protein [Homo sapiens] 464 e-131
gi|239743362 PREDICTED: hypothetical protein XP_002342841 [Homo ... 464 e-131
gi|239509054 PREDICTED: similar to RAB19, member RAS oncogene fa... 389 e-108
gi|169214831 PREDICTED: zinc finger protein 840 [Homo sapiens] 48 8e-06
gi|169215032 PREDICTED: zinc finger protein 840 [Homo sapiens] 48 8e-06
gi|169214556 PREDICTED: zinc finger protein 840 [Homo sapiens] 48 8e-06
gi|7657218 bromodomain-containing protein 4 isoform short [Homo ... 43 3e-04
gi|19718731 bromodomain-containing protein 4 isoform long [Homo ... 43 3e-04
gi|39812378 RAN binding protein 9 [Homo sapiens] 42 3e-04
gi|195947369 junction-mediating and regulatory protein [Homo sap... 42 6e-04
gi|122937321 UNC homeobox [Homo sapiens] 42 6e-04
gi|39930517 sterile alpha motif domain containing 1 [Homo sapiens] 41 7e-04
gi|50843837 hypothetical protein LOC55701 [Homo sapiens] 41 0.001
gi|24497589 aristaless related homeobox [Homo sapiens] 40 0.002
gi|33286436 gametogenetin [Homo sapiens] 40 0.002
gi|149158690 HLA-B associated transcript-2 [Homo sapiens] 39 0.003
gi|12751477 forkhead box L2 [Homo sapiens] 39 0.005
gi|239754327 PREDICTED: chromosome 6 open reading frame 132 [Hom... 39 0.005
gi|239748855 PREDICTED: chromosome 6 open reading frame 132 [Hom... 39 0.005
gi|239742884 PREDICTED: hypothetical protein LOC647024 [Homo sap... 39 0.005
gi|52485606 formin-like 2 [Homo sapiens] 39 0.005
gi|110347459 MYC-associated zinc finger protein isoform 2 [Homo ... 38 0.008
gi|110347461 MYC-associated zinc finger protein isoform 1 [Homo ... 38 0.008
gi|145701025 multiple EGF-like-domains 8 [Homo sapiens] 38 0.008
gi|210032580 SET domain containing 1B [Homo sapiens] 38 0.008
gi|150170699 kinesin family member 26A [Homo sapiens] 38 0.008
gi|47271406 bin3, bicoid-interacting 3 [Homo sapiens] 38 0.008
gi|41352718 deltex homolog 1 [Homo sapiens] 38 0.008
gi|112821681 G protein-regulated inducer of neurite outgrowth 1 ... 38 0.008
>gi|239754717 PREDICTED: hypothetical protein [Homo sapiens]
Length = 229
Score = 464 bits (1195), Expect = e-131
Identities = 229/229 (100%), Positives = 229/229 (100%)
Query: 1 MLVKTVPSKWAAPTSFIKIPARLVAGKENIATLIHSGFQRQLSPSLQTPCIKYLQVTCLV 60
MLVKTVPSKWAAPTSFIKIPARLVAGKENIATLIHSGFQRQLSPSLQTPCIKYLQVTCLV
Sbjct: 1 MLVKTVPSKWAAPTSFIKIPARLVAGKENIATLIHSGFQRQLSPSLQTPCIKYLQVTCLV 60
Query: 61 QPPPLPSLPPPPPPAPRDGAVTVGIGVGEAAAAVAAAAPAPDVVAVVPGVAASAITVYPT 120
QPPPLPSLPPPPPPAPRDGAVTVGIGVGEAAAAVAAAAPAPDVVAVVPGVAASAITVYPT
Sbjct: 61 QPPPLPSLPPPPPPAPRDGAVTVGIGVGEAAAAVAAAAPAPDVVAVVPGVAASAITVYPT 120
Query: 121 QQRPRNFRDHIVPVRLRGEDGEARRGEGKDTEAPVRSPPATRRVSERSRHFNCGPRACAP 180
QQRPRNFRDHIVPVRLRGEDGEARRGEGKDTEAPVRSPPATRRVSERSRHFNCGPRACAP
Sbjct: 121 QQRPRNFRDHIVPVRLRGEDGEARRGEGKDTEAPVRSPPATRRVSERSRHFNCGPRACAP 180
Query: 181 AARPRRRSLVEGTSPPERGGANGGLYRCVLGSKPRRRKSIVSGFLPSRG 229
AARPRRRSLVEGTSPPERGGANGGLYRCVLGSKPRRRKSIVSGFLPSRG
Sbjct: 181 AARPRRRSLVEGTSPPERGGANGGLYRCVLGSKPRRRKSIVSGFLPSRG 229
>gi|239749265 PREDICTED: hypothetical protein [Homo sapiens]
Length = 229
Score = 464 bits (1195), Expect = e-131
Identities = 229/229 (100%), Positives = 229/229 (100%)
Query: 1 MLVKTVPSKWAAPTSFIKIPARLVAGKENIATLIHSGFQRQLSPSLQTPCIKYLQVTCLV 60
MLVKTVPSKWAAPTSFIKIPARLVAGKENIATLIHSGFQRQLSPSLQTPCIKYLQVTCLV
Sbjct: 1 MLVKTVPSKWAAPTSFIKIPARLVAGKENIATLIHSGFQRQLSPSLQTPCIKYLQVTCLV 60
Query: 61 QPPPLPSLPPPPPPAPRDGAVTVGIGVGEAAAAVAAAAPAPDVVAVVPGVAASAITVYPT 120
QPPPLPSLPPPPPPAPRDGAVTVGIGVGEAAAAVAAAAPAPDVVAVVPGVAASAITVYPT
Sbjct: 61 QPPPLPSLPPPPPPAPRDGAVTVGIGVGEAAAAVAAAAPAPDVVAVVPGVAASAITVYPT 120
Query: 121 QQRPRNFRDHIVPVRLRGEDGEARRGEGKDTEAPVRSPPATRRVSERSRHFNCGPRACAP 180
QQRPRNFRDHIVPVRLRGEDGEARRGEGKDTEAPVRSPPATRRVSERSRHFNCGPRACAP
Sbjct: 121 QQRPRNFRDHIVPVRLRGEDGEARRGEGKDTEAPVRSPPATRRVSERSRHFNCGPRACAP 180
Query: 181 AARPRRRSLVEGTSPPERGGANGGLYRCVLGSKPRRRKSIVSGFLPSRG 229
AARPRRRSLVEGTSPPERGGANGGLYRCVLGSKPRRRKSIVSGFLPSRG
Sbjct: 181 AARPRRRSLVEGTSPPERGGANGGLYRCVLGSKPRRRKSIVSGFLPSRG 229
>gi|239743362 PREDICTED: hypothetical protein XP_002342841 [Homo
sapiens]
Length = 229
Score = 464 bits (1195), Expect = e-131
Identities = 229/229 (100%), Positives = 229/229 (100%)
Query: 1 MLVKTVPSKWAAPTSFIKIPARLVAGKENIATLIHSGFQRQLSPSLQTPCIKYLQVTCLV 60
MLVKTVPSKWAAPTSFIKIPARLVAGKENIATLIHSGFQRQLSPSLQTPCIKYLQVTCLV
Sbjct: 1 MLVKTVPSKWAAPTSFIKIPARLVAGKENIATLIHSGFQRQLSPSLQTPCIKYLQVTCLV 60
Query: 61 QPPPLPSLPPPPPPAPRDGAVTVGIGVGEAAAAVAAAAPAPDVVAVVPGVAASAITVYPT 120
QPPPLPSLPPPPPPAPRDGAVTVGIGVGEAAAAVAAAAPAPDVVAVVPGVAASAITVYPT
Sbjct: 61 QPPPLPSLPPPPPPAPRDGAVTVGIGVGEAAAAVAAAAPAPDVVAVVPGVAASAITVYPT 120
Query: 121 QQRPRNFRDHIVPVRLRGEDGEARRGEGKDTEAPVRSPPATRRVSERSRHFNCGPRACAP 180
QQRPRNFRDHIVPVRLRGEDGEARRGEGKDTEAPVRSPPATRRVSERSRHFNCGPRACAP
Sbjct: 121 QQRPRNFRDHIVPVRLRGEDGEARRGEGKDTEAPVRSPPATRRVSERSRHFNCGPRACAP 180
Query: 181 AARPRRRSLVEGTSPPERGGANGGLYRCVLGSKPRRRKSIVSGFLPSRG 229
AARPRRRSLVEGTSPPERGGANGGLYRCVLGSKPRRRKSIVSGFLPSRG
Sbjct: 181 AARPRRRSLVEGTSPPERGGANGGLYRCVLGSKPRRRKSIVSGFLPSRG 229
>gi|239509054 PREDICTED: similar to RAB19, member RAS oncogene
family [Homo sapiens]
Length = 339
Score = 389 bits (998), Expect = e-108
Identities = 190/190 (100%), Positives = 190/190 (100%)
Query: 40 RQLSPSLQTPCIKYLQVTCLVQPPPLPSLPPPPPPAPRDGAVTVGIGVGEAAAAVAAAAP 99
RQLSPSLQTPCIKYLQVTCLVQPPPLPSLPPPPPPAPRDGAVTVGIGVGEAAAAVAAAAP
Sbjct: 150 RQLSPSLQTPCIKYLQVTCLVQPPPLPSLPPPPPPAPRDGAVTVGIGVGEAAAAVAAAAP 209
Query: 100 APDVVAVVPGVAASAITVYPTQQRPRNFRDHIVPVRLRGEDGEARRGEGKDTEAPVRSPP 159
APDVVAVVPGVAASAITVYPTQQRPRNFRDHIVPVRLRGEDGEARRGEGKDTEAPVRSPP
Sbjct: 210 APDVVAVVPGVAASAITVYPTQQRPRNFRDHIVPVRLRGEDGEARRGEGKDTEAPVRSPP 269
Query: 160 ATRRVSERSRHFNCGPRACAPAARPRRRSLVEGTSPPERGGANGGLYRCVLGSKPRRRKS 219
ATRRVSERSRHFNCGPRACAPAARPRRRSLVEGTSPPERGGANGGLYRCVLGSKPRRRKS
Sbjct: 270 ATRRVSERSRHFNCGPRACAPAARPRRRSLVEGTSPPERGGANGGLYRCVLGSKPRRRKS 329
Query: 220 IVSGFLPSRG 229
IVSGFLPSRG
Sbjct: 330 IVSGFLPSRG 339
>gi|169214831 PREDICTED: zinc finger protein 840 [Homo sapiens]
Length = 980
Score = 47.8 bits (112), Expect = 8e-06
Identities = 26/42 (61%), Positives = 28/42 (66%), Gaps = 5/42 (11%)
Query: 79 GAVTVGIGVGEAAAAVAAAAPAPDVVAVVPGVAASAITVYPT 120
G VTVG G AAA PAPD+VAVV G AAS +TVYPT
Sbjct: 218 GVVTVGWG-----GIAAAAGPAPDIVAVVLGAAASTVTVYPT 254
Score = 42.0 bits (97), Expect = 4e-04
Identities = 19/25 (76%), Positives = 21/25 (84%)
Query: 1 MLVKTVPSKWAAPTSFIKIPARLVA 25
+LVKT P +WAAP SFIKIPARL A
Sbjct: 77 LLVKTHPPRWAAPLSFIKIPARLAA 101
>gi|169215032 PREDICTED: zinc finger protein 840 [Homo sapiens]
Length = 980
Score = 47.8 bits (112), Expect = 8e-06
Identities = 26/42 (61%), Positives = 28/42 (66%), Gaps = 5/42 (11%)
Query: 79 GAVTVGIGVGEAAAAVAAAAPAPDVVAVVPGVAASAITVYPT 120
G VTVG G AAA PAPD+VAVV G AAS +TVYPT
Sbjct: 218 GVVTVGWG-----GIAAAAGPAPDIVAVVLGAAASTVTVYPT 254
Score = 42.0 bits (97), Expect = 4e-04
Identities = 19/25 (76%), Positives = 21/25 (84%)
Query: 1 MLVKTVPSKWAAPTSFIKIPARLVA 25
+LVKT P +WAAP SFIKIPARL A
Sbjct: 77 LLVKTHPPRWAAPLSFIKIPARLAA 101
>gi|169214556 PREDICTED: zinc finger protein 840 [Homo sapiens]
Length = 980
Score = 47.8 bits (112), Expect = 8e-06
Identities = 26/42 (61%), Positives = 28/42 (66%), Gaps = 5/42 (11%)
Query: 79 GAVTVGIGVGEAAAAVAAAAPAPDVVAVVPGVAASAITVYPT 120
G VTVG G AAA PAPD+VAVV G AAS +TVYPT
Sbjct: 218 GVVTVGWG-----GIAAAAGPAPDIVAVVLGAAASTVTVYPT 254
Score = 42.0 bits (97), Expect = 4e-04
Identities = 19/25 (76%), Positives = 21/25 (84%)
Query: 1 MLVKTVPSKWAAPTSFIKIPARLVA 25
+LVKT P +WAAP SFIKIPARL A
Sbjct: 77 LLVKTHPPRWAAPLSFIKIPARLAA 101
>gi|7657218 bromodomain-containing protein 4 isoform short [Homo
sapiens]
Length = 722
Score = 42.7 bits (99), Expect = 3e-04
Identities = 39/139 (28%), Positives = 56/139 (40%), Gaps = 27/139 (19%)
Query: 46 LQTPCIKYLQVTCLVQPPPLPSLP-PPPPPAPRDGAVTVGIGVGEAAAAVAAAAPAPDVV 104
+QTP + + L PPP+P P PPP PAP+ ++ + AA P P V
Sbjct: 234 VQTPVMTVVPPQPLQTPPPVPPQPQPPPAPAPQP---------VQSHPPIIAATPQP--V 282
Query: 105 AVVPGVAASAITVYPTQQRPRNFRDHIVPVRLRGEDGEARRGEGKDTEAPVRSP------ 158
GV A T PT P + P L E + G+ +++ PV+ P
Sbjct: 283 KTKKGVKRKADTTTPTTIDPIH-----EPPSLPPEPKTTKLGQRRESSRPVKPPKKDVPD 337
Query: 159 ----PATRRVSERSRHFNC 173
PA + S+ S C
Sbjct: 338 SQQHPAPEKSSKVSEQLKC 356
>gi|19718731 bromodomain-containing protein 4 isoform long [Homo
sapiens]
Length = 1362
Score = 42.7 bits (99), Expect = 3e-04
Identities = 39/139 (28%), Positives = 56/139 (40%), Gaps = 27/139 (19%)
Query: 46 LQTPCIKYLQVTCLVQPPPLPSLP-PPPPPAPRDGAVTVGIGVGEAAAAVAAAAPAPDVV 104
+QTP + + L PPP+P P PPP PAP+ ++ + AA P P V
Sbjct: 234 VQTPVMTVVPPQPLQTPPPVPPQPQPPPAPAPQP---------VQSHPPIIAATPQP--V 282
Query: 105 AVVPGVAASAITVYPTQQRPRNFRDHIVPVRLRGEDGEARRGEGKDTEAPVRSP------ 158
GV A T PT P + P L E + G+ +++ PV+ P
Sbjct: 283 KTKKGVKRKADTTTPTTIDPIH-----EPPSLPPEPKTTKLGQRRESSRPVKPPKKDVPD 337
Query: 159 ----PATRRVSERSRHFNC 173
PA + S+ S C
Sbjct: 338 SQQHPAPEKSSKVSEQLKC 356
Score = 32.0 bits (71), Expect = 0.45
Identities = 17/51 (33%), Positives = 23/51 (45%), Gaps = 3/51 (5%)
Query: 61 QPPPLPSLPPPPPPAPRD---GAVTVGIGVGEAAAAVAAAAPAPDVVAVVP 108
QPPP P PPPPPP + + + AA ++P P + VP
Sbjct: 756 QPPPPPQQPPPPPPPQQQQQPPPPPPPPSMPQQAAPAMKSSPPPFIATQVP 806
Score = 28.1 bits (61), Expect = 6.5
Identities = 15/36 (41%), Positives = 16/36 (44%)
Query: 39 QRQLSPSLQTPCIKYLQVTCLVQPPPLPSLPPPPPP 74
Q Q P L P +Q QPPP P P PPP
Sbjct: 951 QSQPPPPLPPPPHPSVQQQLQQQPPPPPPPQPQPPP 986
Score = 27.7 bits (60), Expect = 8.5
Identities = 12/24 (50%), Positives = 14/24 (58%), Gaps = 8/24 (33%)
Query: 62 PPPLPSL--------PPPPPPAPR 77
PPP PS+ PPPPPP P+
Sbjct: 960 PPPHPSVQQQLQQQPPPPPPPQPQ 983
>gi|39812378 RAN binding protein 9 [Homo sapiens]
Length = 729
Score = 42.4 bits (98), Expect = 3e-04
Identities = 24/55 (43%), Positives = 28/55 (50%), Gaps = 9/55 (16%)
Query: 62 PPPLPSLPPPPPPAPRDGAVTVGIGVGEAAAAVAAAAPAPDVVAVVPGVAASAIT 116
PPP + PPPPPP P A +AAA A+ PAP +A PG A A T
Sbjct: 75 PPPATAAPPPPPPPPPPPA---------SAAAPASGPPAPPGLAAGPGPAGGAPT 120
Score = 30.8 bits (68), Expect = 1.0
Identities = 24/71 (33%), Positives = 30/71 (42%), Gaps = 4/71 (5%)
Query: 39 QRQLSPSLQTPCIKYLQVTCLVQP-PPLPSLPPPPPPAPRDGAVTVGIGVGEAAAAVAAA 97
Q+QLSP P V+ +V P PP S P +P GA G+G AA +
Sbjct: 16 QQQLSPP---PPAALAPVSGVVLPAPPAVSAGSSPAGSPGGGAGGEGLGAAAAALLLHPP 72
Query: 98 APAPDVVAVVP 108
P P A P
Sbjct: 73 PPPPPATAAPP 83
Score = 28.1 bits (61), Expect = 6.5
Identities = 19/50 (38%), Positives = 21/50 (42%), Gaps = 18/50 (36%)
Query: 62 PPPLPSLPPPP---------PPAP---------RDGAVTVGIGVGEAAAA 93
PPP P PPPP PPAP GA T + G +AAA
Sbjct: 82 PPPPPPPPPPPASAAAPASGPPAPPGLAAGPGPAGGAPTPALVAGSSAAA 131
>gi|195947369 junction-mediating and regulatory protein [Homo
sapiens]
Length = 988
Score = 41.6 bits (96), Expect = 6e-04
Identities = 26/78 (33%), Positives = 36/78 (46%), Gaps = 5/78 (6%)
Query: 3 VKTVPSKWAAPTSFIKIPARLVAGKENIATLIHSGFQRQLSPSLQTPCIKYLQVTCLVQ- 61
VK PS+ P S +++ + E +L SG +L P++ P + C V
Sbjct: 742 VKRGPSQTTEPQSLVQLEDTSLTQLE-ATSLPLSGVTSELPPTISLPLLNNNLEPCSVTI 800
Query: 62 ---PPPLPSLPPPPPPAP 76
P PLP PPPPPP P
Sbjct: 801 NPLPSPLPPTPPPPPPPP 818
>gi|122937321 UNC homeobox [Homo sapiens]
Length = 531
Score = 41.6 bits (96), Expect = 6e-04
Identities = 47/140 (33%), Positives = 55/140 (39%), Gaps = 30/140 (21%)
Query: 63 PPLPSLPPPPPPAPRDGAVTVGIGVGEAAAAVAAAAPAPDVVAVVPGVAASAITVYPTQQ 122
PP P++PP PP GA + G G A + A A +PD VA PG A A
Sbjct: 410 PPAPAVPPAPPAQASFGAFS---GPGGAPDS-AFARRSPDAVA-SPGAPAPA-------- 456
Query: 123 RPRNFRDHIVPVRLRGEDGEARRGEGKDTEAPVRSPPATRRVSERSRHFNCGPRACAPAA 182
P FRD G G+ T P PPA S R GPR +PA
Sbjct: 457 -PAPFRDLASAAATEGGGGDC---ADAGTAGPAPPPPAP---SPRP-----GPRPPSPAE 504
Query: 183 RPRRRSLVE-----GTSPPE 197
P + E G SPPE
Sbjct: 505 EPATCGVPEPGAAAGPSPPE 524
Score = 38.5 bits (88), Expect = 0.005
Identities = 40/146 (27%), Positives = 48/146 (32%), Gaps = 31/146 (21%)
Query: 66 PSLPPPPPPAPRDGAVTVGIGVGEAAAAVAAAAPAPDVVAVVPGVAASAITVYPTQQRPR 125
P P PPPPA + G G A+ A APAP PG A YP+Q+
Sbjct: 244 PEPPEPPPPAAK--------GPGAHASGAAGTAPAPPGEPPAPGTCDPAF--YPSQR--- 290
Query: 126 NFRDHIVPVRLRGEDGEARRGEGKDTEAPVRSPPATRRVSERSRHFNCGPRACAPAARPR 185
G + R G D +A P A ER A P A P
Sbjct: 291 -----------SGAGPQPRPGRPADKDAASCGPGAAVAAVERG-------AAGLPKASPF 332
Query: 186 RRSLVEGTSPPERGGANGGLYRCVLG 211
+ SPP R A+ G
Sbjct: 333 SVESLLSDSPPRRKAASNAAAAAAAG 358
Score = 29.6 bits (65), Expect = 2.2
Identities = 17/41 (41%), Positives = 21/41 (51%), Gaps = 6/41 (14%)
Query: 62 PPPLPS-LPPPPPPAPRDGAVTVGIGVGEAAAAVAAAAPAP 101
PPP PS P P PP+P + T G+ AAA P+P
Sbjct: 487 PPPAPSPRPGPRPPSPAEEPATCGV-----PEPGAAAGPSP 522
>gi|39930517 sterile alpha motif domain containing 1 [Homo sapiens]
Length = 538
Score = 41.2 bits (95), Expect = 7e-04
Identities = 42/129 (32%), Positives = 47/129 (36%), Gaps = 31/129 (24%)
Query: 60 VQPPPLPSLPPPPPPAPRDGAVTVGIGVGEAAAAVAAAAPAPDVVAVVP--GVAASAITV 117
VQPP + PP PP APR A AA AAAAP P P VAA+A
Sbjct: 99 VQPPRRGATPPAPPRAPRG-----------APAAAAAAAPPPTPAPPPPPAPVAAAAPAR 147
Query: 118 YPTQQRPRNFRDHIVPVRLRGEDGEARRGEGKDTEAPVRSPPATRRVSERSRHFNCGPRA 177
P R G A+ G AP+ +PP P A
Sbjct: 148 AP--------RAAAAAATAPPSPGPAQPGPRAQRAAPLAAPPPA----------PAAPPA 189
Query: 178 CAPAARPRR 186
AP A PRR
Sbjct: 190 VAPPAGPRR 198
Score = 29.3 bits (64), Expect = 2.9
Identities = 30/112 (26%), Positives = 43/112 (38%), Gaps = 10/112 (8%)
Query: 62 PPPLPSLPP----PPPPAPRDGAVTVGIGVGEAAAAVAAAAPAPDVVAVVPGVAASAITV 117
PPP P PP PPPP P+ + G AA V+ +VV + G + +
Sbjct: 213 PPPQPPAPPQQQQPPPPQPQPPPEGGAVRAGGAARPVSLR----EVVRYLGGSGGAGGRL 268
Query: 118 YPTQQRPRNFRDHIVPVRLRGEDGEARRGEGKDTEAPVRSPPATRRVSERSR 169
T+ R + + R R E + P R+PPA RS+
Sbjct: 269 --TRGRVQGLLEEEAAARGRLERTRLGALALPRGDRPGRAPPAASARPSRSK 318
>gi|50843837 hypothetical protein LOC55701 [Homo sapiens]
Length = 1519
Score = 40.8 bits (94), Expect = 0.001
Identities = 49/172 (28%), Positives = 63/172 (36%), Gaps = 40/172 (23%)
Query: 62 PPPLPSLPP--PPPPAPRDGAVTVGIGVGEAAAAVAAAAPAPDVVAVV------------ 107
PP LPS PP P PP P + T G G A +++ V
Sbjct: 202 PPELPSGPPGLPSPPLPEEALGTRSPGDGHNAPVEGPEGEYVELLEVTLPVRGSPTDAEG 261
Query: 108 -PGVAASAITVYPTQQ------RPRNFRD--HIVPVRLRGEDGEARRGEGKDTEAPVRSP 158
PG+ S + PT++ R R R H + RG+DG GEG T A SP
Sbjct: 262 SPGL--SRVRTVPTRKGAGGKGRHRRHRAWMHQKGLGPRGQDGARPPGEGSSTGASPESP 319
Query: 159 PATRRVSERSRHFNCGPRACAPAARPRRRSLVEGTS-----PPE-RGGANGG 204
P V E A + P ++ E + P E RGG GG
Sbjct: 320 PGAEAVPE---------AAVLEVSEPPAEAVGEASGSCPLRPGELRGGGGGG 362
>gi|24497589 aristaless related homeobox [Homo sapiens]
Length = 562
Score = 39.7 bits (91), Expect = 0.002
Identities = 24/61 (39%), Positives = 27/61 (44%)
Query: 64 PLPSLPPPPPPAPRDGAVTVGIGVGEAAAAVAAAAPAPDVVAVVPGVAASAITVYPTQQR 123
P PPPPPP R G G G AAAA AAAA ++ P V+ S Y
Sbjct: 121 PRGEAPPPPPPTARPGERPDGAGAAAAAAAAAAAAWDTLKISQAPQVSISRSKSYRENGA 180
Query: 124 P 124
P
Sbjct: 181 P 181
>gi|33286436 gametogenetin [Homo sapiens]
Length = 652
Score = 39.7 bits (91), Expect = 0.002
Identities = 47/158 (29%), Positives = 56/158 (35%), Gaps = 43/158 (27%)
Query: 59 LVQPPPLPSLPPP---PPPAPRDGAVTVGIGVGEAAAAVAAAAPAPDVVAVVPGVAASAI 115
L P P P+L PP P P P +T G+G E+A A AA P +A A S
Sbjct: 440 LPPPTPPPTLQPPALQPTPLPVAPPLTPGLGHKESALAPTAAPALPPALAADQAPAPSPA 499
Query: 116 TVYPTQQRPRNFRDHIVPVRLRGEDGEARRGEGKDTEAPVRSP-PATRRVSERSRHFNCG 174
PT P PV +P PA + R+R N G
Sbjct: 500 PA-PTVAEP---------------------------SPPVSAPAPAAAPIKTRTRR-NKG 530
Query: 175 PRACAPAAR--------PRRRSLVEGTSPPERGGANGG 204
RA A R PR R+ T P GG GG
Sbjct: 531 SRAARGATRKDGLHGDGPRERA--TATVPDSSGGGGGG 566
Score = 33.9 bits (76), Expect = 0.12
Identities = 41/174 (23%), Positives = 65/174 (37%), Gaps = 31/174 (17%)
Query: 54 LQVTCLVQPPPLPSLPPPPPPAPRDGAVTVGIGVGEAAAAVAAAAPAPDVVAVVPGVAAS 113
L + C + PSL PP + ++G G G A + A +V+ P
Sbjct: 239 LSLLCKITFKSRPSLAPPAASSSLAAKASLGGGGGGGLFAASGAISYAEVLKQGP----- 293
Query: 114 AITVYPTQQRPRNFRDHIVPVRLRGEDGEARRGEGKDTEAPVRSPPATRRVSERSRHFNC 173
+ P RP + V ++ E G+G+ P +P + ++R
Sbjct: 294 ---LPPGAARP------LGEVSRGAQEAEGGDGDGEGCSGPPSAP------ASQARALPP 338
Query: 174 GPRACAPAARPRRRSLVEGTSPPER----GGANGGLYRCVLGSKPRRRKSIVSG 223
P P ++P + V PER GA GG+ PRRR + +SG
Sbjct: 339 PPYTTFPGSKP-KFDWVSAPDGPERHFRFNGAGGGI------GAPRRRAAALSG 385
Score = 27.7 bits (60), Expect = 8.5
Identities = 20/73 (27%), Positives = 27/73 (36%), Gaps = 8/73 (10%)
Query: 62 PPPLPSLPPPPPPAPRDGAVTVGIGVGEAAAAVAAAAPAPDVVA--------VVPGVAAS 113
PP L L PPPPP TV + + P P + + + P +A
Sbjct: 136 PPSLRPLKPPPPPRQLSVKDTVPRAPSQFPPPLETWKPPPPLPSERQPADRRITPALATP 195
Query: 114 AITVYPTQQRPRN 126
A +Q PRN
Sbjct: 196 ASPPTESQAGPRN 208
>gi|149158690 HLA-B associated transcript-2 [Homo sapiens]
Length = 2157
Score = 39.3 bits (90), Expect = 0.003
Identities = 44/187 (23%), Positives = 69/187 (36%), Gaps = 14/187 (7%)
Query: 14 TSFIKIPARLVAGKENIATLIHSGFQRQLSPSLQTPCIKYLQVTCLVQPPPLP--SLPPP 71
TS +++ L + + +T + G Q PS P + L Q P + SLPP
Sbjct: 1941 TSLLQVRQDLPSPSDFYSTPLQPGGQSGFLPS-GAPAQQMLLPMVDSQLPVVNFGSLPPA 1999
Query: 72 PPPAPRDGAVTVGIGVGEAAAAVAAAAPAPDVVAVVPGVAASAITVYPTQQRPRNF-RDH 130
PPPAP ++ V A P + P A+ + P + P + R
Sbjct: 2000 PPPAPPPLSL----------LPVGPALQPPSLAVRPPPAPATRVLPSPARPFPASLGRAE 2049
Query: 131 IVPVRLRGEDGEARRGEGKDTEAPVRSPPATRRVSERSRHFNCGPRACAPAARPRRRSLV 190
+ PV L+ + R+PP R S + P + R +R L
Sbjct: 2050 LHPVELKPFQDYQKLSSNLGGPGSSRTPPTGRSFSGLNSRLKATPSTYSGVFRTQRVDLY 2109
Query: 191 EGTSPPE 197
+ SPP+
Sbjct: 2110 QQASPPD 2116
Score = 35.8 bits (81), Expect = 0.031
Identities = 44/147 (29%), Positives = 56/147 (38%), Gaps = 29/147 (19%)
Query: 74 PAPRDGAVTVGIGVGEAAAAVAAAAPAPDVVAVVPGVAASAITVYPTQQRPRNFRDHIVP 133
P P++G +T AP P PG S T + R F VP
Sbjct: 1125 PTPKEGTLTQ-----------VPLAPPP------PGAPPSPAPARFTARGGRVFTPRGVP 1167
Query: 134 VRLRGEDGEARRGEGKDTEAPVRSPPATRRVSERSRHFNCGPRACAPAARPRRRSLVEGT 193
R RG G G P SPPA ++ GP P+ P + L+ G
Sbjct: 1168 SR-RGRGG----GRPPPQVCPGWSPPAKSLAPKKPP---TGP--LPPSKEPLKEKLIPGP 1217
Query: 194 -SPPERGGANGGL-YRCVLGSKPRRRK 218
SP RGG+NGG G +PRRR+
Sbjct: 1218 LSPVARGGSNGGSNVGMEDGERPRRRR 1244
Score = 30.4 bits (67), Expect = 1.3
Identities = 30/138 (21%), Positives = 43/138 (31%), Gaps = 15/138 (10%)
Query: 62 PPPLPSLPPPPPPAPRDGAVTVGIGVGEAAAAVAAAAPAPDVVAVVPGVAASAITVYPTQ 121
PP PS P PPP P++ + A A+AP P+ P A P Q
Sbjct: 511 PPAAPSTPAPPPAVPKE--------LPAPPAPPPASAPTPETEPEEPAQAP------PAQ 556
Query: 122 QRPRNFRDHIVPVRLRGEDGEARRGEGKDTEAPVRSPPATRRVSERSRHFNCGPRACAPA 181
P P + G + G +PV ++ E P
Sbjct: 557 STPTP-GVAAAPTLVSGGGSTSSTSSGSFEASPVEPQLPSKEGPEPPEEVPPPTTPPVPK 615
Query: 182 ARPRRRSLVEGTSPPERG 199
P+ + PP +G
Sbjct: 616 VEPKGDGIGPTRQPPSQG 633
Score = 28.5 bits (62), Expect = 5.0
Identities = 35/144 (24%), Positives = 50/144 (34%), Gaps = 20/144 (13%)
Query: 66 PSLPPPPPPAPRDGAVTVGIGVGEAAAAVAAAAPAPDVVAVVPG--VAASAITVYPTQQR 123
P +PPPPP G + P P + PG A T P ++
Sbjct: 826 PPVPPPPPYLASYPGFPENGAPGPPISRFPLEEPGPRPLPWPPGSDEVAKIQTPPPKKEP 885
Query: 124 PRNFRDHIVPVRLRGEDGEARRGEGKDTEAPVRSPPATRRVSERSRHFNCGPRACA---- 179
P+ +L G EA R + + + PP RR S + GPR +
Sbjct: 886 PKE-----ETAQLTGP--EAGRKPARGVGSGGQGPPPPRRESRTETRW--GPRPGSSRRG 936
Query: 180 -----PAARPRRRSLVEGTSPPER 198
P A PRR ++ PP +
Sbjct: 937 IPPEEPGAPPRRAGPIKKPPPPTK 960
Score = 27.7 bits (60), Expect = 8.5
Identities = 22/80 (27%), Positives = 30/80 (37%), Gaps = 11/80 (13%)
Query: 148 GKDTEAPVRSPPATRRVSERSRHFNCGPRACAPAAR-----------PRRRSLVEGTSPP 196
G D A +++PP + + GP A AR PRR S E P
Sbjct: 869 GSDEVAKIQTPPPKKEPPKEETAQLTGPEAGRKPARGVGSGGQGPPPPRRESRTETRWGP 928
Query: 197 ERGGANGGLYRCVLGSKPRR 216
G + G+ G+ PRR
Sbjct: 929 RPGSSRRGIPPEEPGAPPRR 948
>gi|12751477 forkhead box L2 [Homo sapiens]
Length = 376
Score = 38.5 bits (88), Expect = 0.005
Identities = 26/68 (38%), Positives = 29/68 (42%), Gaps = 3/68 (4%)
Query: 52 KYLQVTCLVQPPPLPSLPPPPPPAPRDGAVTVGIGVGEAAAAVAAAAPAPDVVAVVPGVA 111
KYLQ L PLP PP P P AAAA AA +P AVV G+A
Sbjct: 193 KYLQSGFLNNSWPLPQ---PPSPMPYASCQMAAAAAAAAAAAAAAGPGSPGAAAVVKGLA 249
Query: 112 ASAITVYP 119
A + P
Sbjct: 250 GPAASYGP 257
Score = 28.1 bits (61), Expect = 6.5
Identities = 18/50 (36%), Positives = 19/50 (38%), Gaps = 10/50 (20%)
Query: 62 PPPLPSLPP----------PPPPAPRDGAVTVGIGVGEAAAAVAAAAPAP 101
PPP P P PPP P GA G A+ AA PAP
Sbjct: 286 PPPHPHPHPHAHHLHAAAAPPPAPPHHGAAAPPPGQLSPASPATAAPPAP 335
>gi|239754327 PREDICTED: chromosome 6 open reading frame 132 [Homo
sapiens]
Length = 1188
Score = 38.5 bits (88), Expect = 0.005
Identities = 35/110 (31%), Positives = 42/110 (38%), Gaps = 16/110 (14%)
Query: 59 LVQPPPLPSLPPPPPP-----APRDGAVTVGIG-----VGEAAAAVAAAAPAPDVVAVVP 108
L++PPP PS+ PPPPP +P + I + A A P P V A P
Sbjct: 177 LLEPPPPPSMAPPPPPVLEALSPPHTLSSPSIPTPPDFIPPAPPLAFLAPPPPPVPAPAP 236
Query: 109 GVAASAITVYPTQQRPRNFRDHIVPVRLRGEDGEARRGEGKDTEAPVRSP 158
AS TV P V L G EA R +P RSP
Sbjct: 237 PAPASPHTVGTRLFPPGGVTKWKSDVALNGRQAEATRA------SPPRSP 280
Score = 33.9 bits (76), Expect = 0.12
Identities = 34/123 (27%), Positives = 44/123 (35%), Gaps = 12/123 (9%)
Query: 62 PPPLPSLPPPPPPAPRDGAVTVGIGVGEAAAAVAAAAPAPDVVAVVPGVAASAITVYPTQ 121
PPP P LPPP PP P A AA PA P ++ A+ P
Sbjct: 390 PPPAPPLPPPAPPLPPPAPPLPPAAPPLPCAQKAAHPPAG--FTKTPKSSSPALKPKPNP 447
Query: 122 QRPRN--------FRDHIVPVRLRGEDGEARRGEGKDTEAPVRSPPATRRVSERSRHFNC 173
P N +RD +LR E G ++ P T V+ +S+
Sbjct: 448 PSPENTASSAPVDWRDPSQMEKLRNELAAYLCGSRREDRFLSHRPGPT--VAPQSKEGKK 505
Query: 174 GPR 176
GPR
Sbjct: 506 GPR 508
Score = 30.8 bits (68), Expect = 1.0
Identities = 31/108 (28%), Positives = 39/108 (36%), Gaps = 11/108 (10%)
Query: 62 PPPLPSL---PPPPPPAPRDGAVTVGIGVGEAAAAVAAAAPAPDVVAVVPGVA--ASAIT 116
PPP P L PPPP AP V + ++ + P PD + P +A A
Sbjct: 171 PPPPPLLLEPPPPPSMAPPPPPVLEALSPPHTLSSPSIPTP-PDFIPPAPPLAFLAPPPP 229
Query: 117 VYPTQQRPRNFRDHIVPVRLRGEDGEAR-----RGEGKDTEAPVRSPP 159
P P H V RL G + G+ EA SPP
Sbjct: 230 PVPAPAPPAPASPHTVGTRLFPPGGVTKWKSDVALNGRQAEATRASPP 277
>gi|239748855 PREDICTED: chromosome 6 open reading frame 132 [Homo
sapiens]
Length = 1188
Score = 38.5 bits (88), Expect = 0.005
Identities = 35/110 (31%), Positives = 42/110 (38%), Gaps = 16/110 (14%)
Query: 59 LVQPPPLPSLPPPPPP-----APRDGAVTVGIG-----VGEAAAAVAAAAPAPDVVAVVP 108
L++PPP PS+ PPPPP +P + I + A A P P V A P
Sbjct: 177 LLEPPPPPSMAPPPPPVLEALSPPHTLSSPSIPTPPDFIPPAPPLAFLAPPPPPVPAPAP 236
Query: 109 GVAASAITVYPTQQRPRNFRDHIVPVRLRGEDGEARRGEGKDTEAPVRSP 158
AS TV P V L G EA R +P RSP
Sbjct: 237 PAPASPHTVGTRLFPPGGVTKWKSDVALNGRQAEATRA------SPPRSP 280
Score = 33.9 bits (76), Expect = 0.12
Identities = 34/123 (27%), Positives = 44/123 (35%), Gaps = 12/123 (9%)
Query: 62 PPPLPSLPPPPPPAPRDGAVTVGIGVGEAAAAVAAAAPAPDVVAVVPGVAASAITVYPTQ 121
PPP P LPPP PP P A AA PA P ++ A+ P
Sbjct: 390 PPPAPPLPPPAPPLPPPAPPLPPAAPPLPCAQKAAHPPAG--FTKTPKSSSPALKPKPNP 447
Query: 122 QRPRN--------FRDHIVPVRLRGEDGEARRGEGKDTEAPVRSPPATRRVSERSRHFNC 173
P N +RD +LR E G ++ P T V+ +S+
Sbjct: 448 PSPENTASSAPVDWRDPSQMEKLRNELAAYLCGSRREDRFLSHRPGPT--VAPQSKEGKK 505
Query: 174 GPR 176
GPR
Sbjct: 506 GPR 508
Score = 30.8 bits (68), Expect = 1.0
Identities = 31/108 (28%), Positives = 39/108 (36%), Gaps = 11/108 (10%)
Query: 62 PPPLPSL---PPPPPPAPRDGAVTVGIGVGEAAAAVAAAAPAPDVVAVVPGVA--ASAIT 116
PPP P L PPPP AP V + ++ + P PD + P +A A
Sbjct: 171 PPPPPLLLEPPPPPSMAPPPPPVLEALSPPHTLSSPSIPTP-PDFIPPAPPLAFLAPPPP 229
Query: 117 VYPTQQRPRNFRDHIVPVRLRGEDGEAR-----RGEGKDTEAPVRSPP 159
P P H V RL G + G+ EA SPP
Sbjct: 230 PVPAPAPPAPASPHTVGTRLFPPGGVTKWKSDVALNGRQAEATRASPP 277
>gi|239742884 PREDICTED: hypothetical protein LOC647024 [Homo
sapiens]
Length = 1188
Score = 38.5 bits (88), Expect = 0.005
Identities = 35/110 (31%), Positives = 42/110 (38%), Gaps = 16/110 (14%)
Query: 59 LVQPPPLPSLPPPPPP-----APRDGAVTVGIG-----VGEAAAAVAAAAPAPDVVAVVP 108
L++PPP PS+ PPPPP +P + I + A A P P V A P
Sbjct: 177 LLEPPPPPSMAPPPPPVLEALSPPHTLSSPSIPTPPDFIPPAPPLAFLAPPPPPVPAPAP 236
Query: 109 GVAASAITVYPTQQRPRNFRDHIVPVRLRGEDGEARRGEGKDTEAPVRSP 158
AS TV P V L G EA R +P RSP
Sbjct: 237 PAPASPHTVGTRLFPPGGVTKWKSDVALNGRQAEATRA------SPPRSP 280
Score = 33.9 bits (76), Expect = 0.12
Identities = 34/123 (27%), Positives = 44/123 (35%), Gaps = 12/123 (9%)
Query: 62 PPPLPSLPPPPPPAPRDGAVTVGIGVGEAAAAVAAAAPAPDVVAVVPGVAASAITVYPTQ 121
PPP P LPPP PP P A AA PA P ++ A+ P
Sbjct: 390 PPPAPPLPPPAPPLPPPAPPLPPAAPPLPCAQKAAHPPAG--FTKTPKSSSPALKPKPNP 447
Query: 122 QRPRN--------FRDHIVPVRLRGEDGEARRGEGKDTEAPVRSPPATRRVSERSRHFNC 173
P N +RD +LR E G ++ P T V+ +S+
Sbjct: 448 PSPENTASSAPVDWRDPSQMEKLRNELAAYLCGSRREDRFLSHRPGPT--VAPQSKEGKK 505
Query: 174 GPR 176
GPR
Sbjct: 506 GPR 508
Score = 30.8 bits (68), Expect = 1.0
Identities = 31/108 (28%), Positives = 39/108 (36%), Gaps = 11/108 (10%)
Query: 62 PPPLPSL---PPPPPPAPRDGAVTVGIGVGEAAAAVAAAAPAPDVVAVVPGVA--ASAIT 116
PPP P L PPPP AP V + ++ + P PD + P +A A
Sbjct: 171 PPPPPLLLEPPPPPSMAPPPPPVLEALSPPHTLSSPSIPTP-PDFIPPAPPLAFLAPPPP 229
Query: 117 VYPTQQRPRNFRDHIVPVRLRGEDGEAR-----RGEGKDTEAPVRSPP 159
P P H V RL G + G+ EA SPP
Sbjct: 230 PVPAPAPPAPASPHTVGTRLFPPGGVTKWKSDVALNGRQAEATRASPP 277
>gi|52485606 formin-like 2 [Homo sapiens]
Length = 1092
Score = 38.5 bits (88), Expect = 0.005
Identities = 29/77 (37%), Positives = 35/77 (45%), Gaps = 5/77 (6%)
Query: 42 LSPSLQTP-CIKYLQVTCLVQPPPLPSLPPPPPPAPRDGAVTVGIGVGEAAAAVAAAAPA 100
L PS TP ++ VT + PPP P PPPPPP P G AA V A A
Sbjct: 533 LPPSSDTPETVQNGPVTPPMPPPPPPPPPPPPPPPPPPPPPL----PGPAAETVPAPPLA 588
Query: 101 PDVVAVVPGVAASAITV 117
P + + P S+ TV
Sbjct: 589 PPLPSAPPLPGTSSPTV 605
>gi|110347459 MYC-associated zinc finger protein isoform 2 [Homo
sapiens]
Length = 493
Score = 37.7 bits (86), Expect = 0.008
Identities = 33/112 (29%), Positives = 42/112 (37%), Gaps = 5/112 (4%)
Query: 11 AAPTSFIKIPARLVAGKENIATLIHSGFQRQLSPSLQTPCIKYLQVTCLVQPPPLPSLPP 70
A P + + +R V G N Q L + + C P PP
Sbjct: 11 APPFPVLGLDSRGVGGLMNSFPPPQGHAQNPLQVGAELQSRFFASQGCAQSPFQAAPAPP 70
Query: 71 PPPPAPRDGAVTVGI-----GVGEAAAAVAAAAPAPDVVAVVPGVAASAITV 117
P P AP + V + E+AAA AAAA A VA P A+A TV
Sbjct: 71 PTPQAPAAEPLQVDLLPVLAAAQESAAAAAAAAAAAAAVAAAPPAPAAASTV 122
Score = 37.0 bits (84), Expect = 0.014
Identities = 21/56 (37%), Positives = 24/56 (42%)
Query: 57 TCLVQPPPLPSLPPPPPPAPRDGAVTVGIGVGEAAAAVAAAAPAPDVVAVVPGVAA 112
T ++ PP P PPPP AP A AAAA A VAV P +A
Sbjct: 124 TAALKQPPAPPPPPPPVSAPAAEAAPPASAATIAAAAATAVVAPTSTVAVAPVASA 179
Score = 31.6 bits (70), Expect = 0.59
Identities = 18/47 (38%), Positives = 22/47 (46%)
Query: 69 PPPPPPAPRDGAVTVGIGVGEAAAAVAAAAPAPDVVAVVPGVAASAI 115
PP PPP P + A+AA AAA A VVA VA + +
Sbjct: 130 PPAPPPPPPPVSAPAAEAAPPASAATIAAAAATAVVAPTSTVAVAPV 176
>gi|110347461 MYC-associated zinc finger protein isoform 1 [Homo
sapiens]
Length = 477
Score = 37.7 bits (86), Expect = 0.008
Identities = 33/112 (29%), Positives = 42/112 (37%), Gaps = 5/112 (4%)
Query: 11 AAPTSFIKIPARLVAGKENIATLIHSGFQRQLSPSLQTPCIKYLQVTCLVQPPPLPSLPP 70
A P + + +R V G N Q L + + C P PP
Sbjct: 11 APPFPVLGLDSRGVGGLMNSFPPPQGHAQNPLQVGAELQSRFFASQGCAQSPFQAAPAPP 70
Query: 71 PPPPAPRDGAVTVGI-----GVGEAAAAVAAAAPAPDVVAVVPGVAASAITV 117
P P AP + V + E+AAA AAAA A VA P A+A TV
Sbjct: 71 PTPQAPAAEPLQVDLLPVLAAAQESAAAAAAAAAAAAAVAAAPPAPAAASTV 122
Score = 37.0 bits (84), Expect = 0.014
Identities = 21/56 (37%), Positives = 24/56 (42%)
Query: 57 TCLVQPPPLPSLPPPPPPAPRDGAVTVGIGVGEAAAAVAAAAPAPDVVAVVPGVAA 112
T ++ PP P PPPP AP A AAAA A VAV P +A
Sbjct: 124 TAALKQPPAPPPPPPPVSAPAAEAAPPASAATIAAAAATAVVAPTSTVAVAPVASA 179
Score = 31.6 bits (70), Expect = 0.59
Identities = 18/47 (38%), Positives = 22/47 (46%)
Query: 69 PPPPPPAPRDGAVTVGIGVGEAAAAVAAAAPAPDVVAVVPGVAASAI 115
PP PPP P + A+AA AAA A VVA VA + +
Sbjct: 130 PPAPPPPPPPVSAPAAEAAPPASAATIAAAAATAVVAPTSTVAVAPV 176
>gi|145701025 multiple EGF-like-domains 8 [Homo sapiens]
Length = 2778
Score = 37.7 bits (86), Expect = 0.008
Identities = 27/82 (32%), Positives = 33/82 (40%), Gaps = 13/82 (15%)
Query: 57 TCLVQPPPLPSLPPPPPPAPRDGAVTVGIGVGEAAAAVAAAAPAPDVVAVVPGVAASAIT 116
T +QPPP P PPPP P DG G G+ A A++ P V V +
Sbjct: 2456 TVHIQPPPAP----PPPPPPADGGPR---GAGDPGGAGASSGPGAPAEPRVREVWPRGLI 2508
Query: 117 VYPTQQRP------RNFRDHIV 132
Y T P R RD +V
Sbjct: 2509 TYVTVTEPSAVLVVRGVRDRLV 2530
>gi|210032580 SET domain containing 1B [Homo sapiens]
Length = 1923
Score = 37.7 bits (86), Expect = 0.008
Identities = 23/76 (30%), Positives = 34/76 (44%), Gaps = 5/76 (6%)
Query: 4 KTVPSKWAAPTSFIKIPARLVAGKENIATLIHSGFQRQLSPSLQTP---CIKYLQVTCLV 60
++ PS + ++ PA G+E + L+ Q + PS P + +
Sbjct: 1481 RSPPSMLSLDGPLVRPPAGAALGRELL--LLPGQPQTPVFPSTHDPRTVTLDFRNAGIPA 1538
Query: 61 QPPPLPSLPPPPPPAP 76
PPPLP PPPPPP P
Sbjct: 1539 PPPPLPPQPPPPPPPP 1554
Score = 35.4 bits (80), Expect = 0.041
Identities = 16/22 (72%), Positives = 16/22 (72%), Gaps = 2/22 (9%)
Query: 62 PPPLPSLPPPPPPAPRDGAVTV 83
PPPLP PPPPPP P AVTV
Sbjct: 706 PPPLP--PPPPPPPPAHPAVTV 725
Score = 32.3 bits (72), Expect = 0.35
Identities = 15/34 (44%), Positives = 18/34 (52%), Gaps = 6/34 (17%)
Query: 43 SPSLQTPCIKYLQVTCLVQPPPLPSLPPPPPPAP 76
+PS+ P + L PP P LPPPPPP P
Sbjct: 671 APSVLAPTLP------LPPPPGFPPLPPPPPPPP 698
Score = 31.2 bits (69), Expect = 0.77
Identities = 11/14 (78%), Positives = 11/14 (78%)
Query: 63 PPLPSLPPPPPPAP 76
PPLP PPPPPP P
Sbjct: 688 PPLPPPPPPPPPQP 701
Score = 28.9 bits (63), Expect = 3.8
Identities = 10/15 (66%), Positives = 10/15 (66%)
Query: 62 PPPLPSLPPPPPPAP 76
PPP P PP PPP P
Sbjct: 1283 PPPRPPRPPSPPPEP 1297
>gi|150170699 kinesin family member 26A [Homo sapiens]
Length = 1882
Score = 37.7 bits (86), Expect = 0.008
Identities = 49/164 (29%), Positives = 62/164 (37%), Gaps = 36/164 (21%)
Query: 64 PLPSLPPPPPPAPRDGAVTVGIGVGEAAAAVAAAAPAPDVVAVVPG-VAASAITVYPTQQ 122
P PS PP P R ++ E ++ A+A P AV P V A+A+ +
Sbjct: 1354 PRPSGAAPPAPPTRKSSL-------EQRSSPASAPPH----AVNPARVGAAAVLRGEEEP 1402
Query: 123 RPRNFRDHIVP-----VRLRGEDGEA----------RRGEG------KDTEAPVRSPPAT 161
RP + DH VP ++ R EA R EG K EAP R P A
Sbjct: 1403 RPSSRADHSVPRATSSLKARASKVEAAHRLAGHASLERYEGLAHSSSKGREAPGRPPRAV 1462
Query: 162 RRVSERSRHFNCGPRACAPAARPRRRSLVEGTSPPERGGANGGL 205
++ GP APA R V PP GG GL
Sbjct: 1463 PKLGVPPSSPTHGP---APACRSGAAKAVGAPKPPVGGGKGRGL 1503
>gi|47271406 bin3, bicoid-interacting 3 [Homo sapiens]
Length = 689
Score = 37.7 bits (86), Expect = 0.008
Identities = 51/186 (27%), Positives = 70/186 (37%), Gaps = 39/186 (20%)
Query: 62 PPPL---------PSLPPPPPPAPRDGAVTVGIGVGEAAAAVAAAAPAPDVVAVVPGVAA 112
PPPL P++PP A G + G G A +A +PA V PG AA
Sbjct: 17 PPPLKDESGGGGGPTVPPHQEAA--SGELRGGTERGPGRCAPSAGSPAAAVGRESPGAAA 74
Query: 113 SAITVYPTQQRPRNFRDHIVPVRLRGEDGEAR-RGEGKDTEAPVRSPPATRRVSERSRHF 171
++ + QQ RG +A+ GE + ++ P R+ P V E R
Sbjct: 75 TSSSGPQAQQH-------------RGGGPQAQSHGEARLSDPPGRAAPPD--VGEERR-- 117
Query: 172 NCGPRACAPAARPRRRSLVEGTSPPERG----------GANGGLYRCVLGSKPRRRKSIV 221
G P A PR R+ + PP G G GG ++ + RR S
Sbjct: 118 GGGGTELGPPAPPRPRNGYQPHRPPGGGGGKRRNSCNVGGGGGGFKHPAFKRRRRVNSDC 177
Query: 222 SGFLPS 227
LPS
Sbjct: 178 DSVLPS 183
>gi|41352718 deltex homolog 1 [Homo sapiens]
Length = 620
Score = 37.7 bits (86), Expect = 0.008
Identities = 22/48 (45%), Positives = 24/48 (50%), Gaps = 1/48 (2%)
Query: 63 PPLPSLPPPPPPAPRDGAVTVGIGVGEAAAAV-AAAAPAPDVVAVVPG 109
PP P LPPPPPP GA+ V AA+ AA A P A PG
Sbjct: 227 PPAPPLPPPPPPGGPPGALAVRPSATFTGAALWAAPAAGPAEPAPPPG 274
Score = 31.6 bits (70), Expect = 0.59
Identities = 24/61 (39%), Positives = 25/61 (40%), Gaps = 9/61 (14%)
Query: 63 PPLPSLPPPPPPAP------RDGAVTVGIGVGEA-AAAVAAAAPAPDVVAVVPGVAASAI 115
PPLP PPPPP P R A G + A AA A AP P PG A
Sbjct: 230 PPLP--PPPPPGGPPGALAVRPSATFTGAALWAAPAAGPAEPAPPPGAPPRSPGAPGGAR 287
Query: 116 T 116
T
Sbjct: 288 T 288
>gi|112821681 G protein-regulated inducer of neurite outgrowth 1
[Homo sapiens]
Length = 1008
Score = 37.7 bits (86), Expect = 0.008
Identities = 45/157 (28%), Positives = 55/157 (35%), Gaps = 17/157 (10%)
Query: 71 PPPPAPRDGAVTVGIGVGEAAAAV-------AAAAPAPDVVAVVPGVAASAITVYPTQQR 123
P PP+ RD + V +G E + AAA PA V V PG A +A P
Sbjct: 849 PSPPSRRDAGLQVSLGAAETRSVATGPMTPQAAAPPAFPEVRVRPGSALAAAVAPPEPAE 908
Query: 124 PRNFRDHIVPVRLRGEDGEARRGEGKDTEAPVRSPPATRRVSER-SRHFNCGPRACAPAA 182
P V E G G E V + + + H G A PAA
Sbjct: 909 P-------VRDVSWDEKGMTWEVYGAAMEVEVLGMAIQKHLERQIEEHGRQGAPAPPPAA 961
Query: 183 R--PRRRSLVEGTSPPERGGANGGLYRCVLGSKPRRR 217
R P R V P GL+R +L S R R
Sbjct: 962 RAGPGRSGSVRTAPPDGAAKRPPGLFRALLQSVRRPR 998
Database: hs.faa
Posted date: Aug 4, 2009 4:42 PM
Number of letters in database: 18,247,518
Number of sequences in database: 37,866
Lambda K H
0.318 0.135 0.415
Gapped
Lambda K H
0.267 0.0410 0.140
Matrix: BLOSUM62
Gap Penalties: Existence: 11, Extension: 1
Number of Hits to DB: 12,210,203
Number of Sequences: 37866
Number of extensions: 780867
Number of successful extensions: 15699
Number of sequences better than 10.0: 30
Number of HSP's better than 10.0 without gapping: 401
Number of HSP's successfully gapped in prelim test: 447
Number of HSP's that attempted gapping in prelim test: 9111
Number of HSP's gapped (non-prelim): 4592
length of query: 229
length of database: 18,247,518
effective HSP length: 99
effective length of query: 130
effective length of database: 14,498,784
effective search space: 1884841920
effective search space used: 1884841920
T: 11
A: 40
X1: 16 ( 7.3 bits)
X2: 38 (14.6 bits)
X3: 64 (24.7 bits)
S1: 41 (21.7 bits)
S2: 60 (27.7 bits)
Search results were obtained with NCBI BLAST and RefSeq entries.
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Guide to the Human Genome
Copyright © 2010 by Stewart Scherer. All rights reserved.