Home |
Table of Contents |
Search text |
Search genes |
Search sequences |
Purchase |
FAQ |
Blog |
Help
Search of human proteins with 239741865
BLASTP 2.2.11 [Jun-05-2005]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= gi|239741865 PREDICTED: hypothetical protein XP_002342328 [Homo
sapiens]
(165 letters)
Database: hs.faa
37,866 sequences; 18,247,518 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
gi|239753399 PREDICTED: hypothetical protein [Homo sapiens] 345 1e-95
gi|239741865 PREDICTED: hypothetical protein XP_002342328 [Homo ... 345 1e-95
gi|239753329 PREDICTED: hypothetical protein XP_002345623 [Homo ... 49 3e-06
gi|170650694 centaurin, gamma 1 isoform PIKE-L [Homo sapiens] 45 4e-05
gi|27436957 membrane associated guanylate kinase, WW and PDZ dom... 44 6e-05
gi|158854042 hypothetical protein LOC222183 [Homo sapiens] 44 8e-05
gi|54607124 RNA binding motif protein 15B [Homo sapiens] 41 4e-04
gi|239741995 PREDICTED: hypothetical protein XP_002342368 [Homo ... 41 5e-04
gi|30387642 late cornified envelope 4A [Homo sapiens] 40 0.001
gi|41281831 neuronal PAS domain protein 3 isoform 2 [Homo sapiens] 40 0.001
gi|11545847 neuronal PAS domain protein 3 isoform 1 [Homo sapiens] 40 0.001
gi|239751535 PREDICTED: hypothetical protein [Homo sapiens] 40 0.001
gi|239746046 PREDICTED: hypothetical protein XP_002343643 [Homo ... 40 0.001
gi|28269693 xylosyltransferase I [Homo sapiens] 39 0.002
gi|239758013 PREDICTED: hypothetical protein [Homo sapiens] 39 0.002
gi|239756693 PREDICTED: similar to coiled-coil domain containing... 39 0.002
gi|169204521 PREDICTED: hypothetical protein [Homo sapiens] 39 0.002
gi|169205149 PREDICTED: hypothetical protein [Homo sapiens] 39 0.002
gi|169204400 PREDICTED: hypothetical protein [Homo sapiens] 39 0.002
gi|126090909 engrailed homeobox 1 [Homo sapiens] 39 0.003
gi|169206171 PREDICTED: hypothetical protein [Homo sapiens] 39 0.003
gi|169211642 PREDICTED: hypothetical protein [Homo sapiens] 39 0.003
gi|169210857 PREDICTED: similar to RIKEN cDNA E130309D14 [Homo s... 39 0.003
gi|122692281 hypothetical protein LOC645369 [Homo sapiens] 39 0.003
gi|63175652 CREBBP/EP300 inhibitor 2 [Homo sapiens] 39 0.003
gi|239752764 PREDICTED: hypothetical protein [Homo sapiens] 38 0.003
gi|239748099 PREDICTED: hypothetical protein [Homo sapiens] 38 0.003
gi|239747300 PREDICTED: hypothetical protein XP_002346414 [Homo ... 38 0.003
gi|239741124 PREDICTED: hypothetical protein XP_002342114 [Homo ... 38 0.003
gi|61835232 growth differentiation factor 7 preproprotein [Homo ... 38 0.003
>gi|239753399 PREDICTED: hypothetical protein [Homo sapiens]
Length = 165
Score = 345 bits (885), Expect = 1e-95
Identities = 165/165 (100%), Positives = 165/165 (100%)
Query: 1 MEVTRQHPRHPYPKVGSRIPSNRKCHSPPPPPSGTLTGAECGGGRGRERRGGGTRHTHHA 60
MEVTRQHPRHPYPKVGSRIPSNRKCHSPPPPPSGTLTGAECGGGRGRERRGGGTRHTHHA
Sbjct: 1 MEVTRQHPRHPYPKVGSRIPSNRKCHSPPPPPSGTLTGAECGGGRGRERRGGGTRHTHHA 60
Query: 61 ENCFTAFLKVAEGAAAAAPRKPRTGRGGAAATAAVTRKERETAPARDRGGGDGGGARADG 120
ENCFTAFLKVAEGAAAAAPRKPRTGRGGAAATAAVTRKERETAPARDRGGGDGGGARADG
Sbjct: 61 ENCFTAFLKVAEGAAAAAPRKPRTGRGGAAATAAVTRKERETAPARDRGGGDGGGARADG 120
Query: 121 LRGRSPRRRPAGRAHARSLPSAPGSPKKIPTLARAAGPSPTSGVS 165
LRGRSPRRRPAGRAHARSLPSAPGSPKKIPTLARAAGPSPTSGVS
Sbjct: 121 LRGRSPRRRPAGRAHARSLPSAPGSPKKIPTLARAAGPSPTSGVS 165
>gi|239741865 PREDICTED: hypothetical protein XP_002342328 [Homo
sapiens]
Length = 165
Score = 345 bits (885), Expect = 1e-95
Identities = 165/165 (100%), Positives = 165/165 (100%)
Query: 1 MEVTRQHPRHPYPKVGSRIPSNRKCHSPPPPPSGTLTGAECGGGRGRERRGGGTRHTHHA 60
MEVTRQHPRHPYPKVGSRIPSNRKCHSPPPPPSGTLTGAECGGGRGRERRGGGTRHTHHA
Sbjct: 1 MEVTRQHPRHPYPKVGSRIPSNRKCHSPPPPPSGTLTGAECGGGRGRERRGGGTRHTHHA 60
Query: 61 ENCFTAFLKVAEGAAAAAPRKPRTGRGGAAATAAVTRKERETAPARDRGGGDGGGARADG 120
ENCFTAFLKVAEGAAAAAPRKPRTGRGGAAATAAVTRKERETAPARDRGGGDGGGARADG
Sbjct: 61 ENCFTAFLKVAEGAAAAAPRKPRTGRGGAAATAAVTRKERETAPARDRGGGDGGGARADG 120
Query: 121 LRGRSPRRRPAGRAHARSLPSAPGSPKKIPTLARAAGPSPTSGVS 165
LRGRSPRRRPAGRAHARSLPSAPGSPKKIPTLARAAGPSPTSGVS
Sbjct: 121 LRGRSPRRRPAGRAHARSLPSAPGSPKKIPTLARAAGPSPTSGVS 165
>gi|239753329 PREDICTED: hypothetical protein XP_002345623 [Homo
sapiens]
Length = 351
Score = 48.5 bits (114), Expect = 3e-06
Identities = 49/150 (32%), Positives = 63/150 (42%), Gaps = 27/150 (18%)
Query: 4 TRQHPRH-PYP---KVGSRIPSNRKCHSPPPPPSGTLTGAECGGGRGRERRGGGTRHTHH 59
TR PR PY + GSR+ C S P G G + + RGGG +
Sbjct: 111 TRSAPRRCPYQDASRAGSRV-----CRSRPQNRGGGDKKPRRRGQKAAKSRGGGGKKPRG 165
Query: 60 AENCFTAFLKVAEGAAAAAPRKPRTGRGGAAATAAVTRKERETAPARDRGGGDGGGARAD 119
+ A GA A RKPR R G A AA +K ++ A A+ RG GGG +
Sbjct: 166 QK---------AAGAGAKKHRKPR--RRGERAAAAGGKKLQKAAAAKSRG---GGGKKTA 211
Query: 120 GLRGRSPRRRPAGRAHARSLPSAPGSPKKI 149
G+ PRRR +A S G KK+
Sbjct: 212 AAGGKKPRRRRGQKA----AKSRGGGDKKL 237
>gi|170650694 centaurin, gamma 1 isoform PIKE-L [Homo sapiens]
Length = 1192
Score = 44.7 bits (104), Expect = 4e-05
Identities = 50/174 (28%), Positives = 64/174 (36%), Gaps = 41/174 (23%)
Query: 11 PYPKVGSRIPSNRKCHSPPPPPSG----TLTGAECGGGRGRERRGGGTRHTHHAENCFTA 66
P+P GSR K PPP P T +GA+ GGG +G G+R +
Sbjct: 169 PHPGTGSR---RLKVAPPPPAPKPCKTVTTSGAKAGGG-----KGAGSRLS--------- 211
Query: 67 FLKVAEGAAAAAPRKPRTGRGGAAATAAVTRKERETAPARDRGGGDGGGARADGLRGR-S 125
+EG K G G + + AA GG G GA G RG+ S
Sbjct: 212 -WPESEGKPRVKGSKSSAGTGASVSAAATAAAAGGGGSTASTSGGVGAGA---GARGKLS 267
Query: 126 PRR--------------RPAGRAHARSLPSAPGSPKKIPTLARAAGPSPTSGVS 165
PR+ PAG +LP P SP T A A P P ++
Sbjct: 268 PRKGKSKTLDNSDLHPGPPAGSPPPLTLPPTP-SPATAVTAASAQPPGPAPPIT 320
Score = 29.6 bits (65), Expect = 1.2
Identities = 45/180 (25%), Positives = 56/180 (31%), Gaps = 44/180 (24%)
Query: 28 PPPPPSGTLTGAECGGGRGRER------RG----GGTRHT---HHAENCFTAFLKVAEG- 73
PPPPPS + A G RG E RG G RH H + + + G
Sbjct: 28 PPPPPSPSAAAAGAAGARGSETGDPGSPRGAEEPGKKRHERLFHRQDALWISTSSAGTGG 87
Query: 74 ----------AAAAAPRKPRTGR--------------GGAAAT----AAVTRKERETAPA 105
A+ A P P GR GG + A T R +
Sbjct: 88 AEPPALSPAPASPARPVSPAPGRRLSLWAVPPGPPLSGGLSPDPKPGGAPTSSRRPLLSS 147
Query: 106 RDRGGGDGGGARADGLRGRSPRRRPAG--RAHARSLPSAPGSPKKIPTLARAAGPSPTSG 163
GG + G G+ G S G R P AP K + T AG +G
Sbjct: 148 PSWGGPEPEGRAGGGIPGSSSPHPGTGSRRLKVAPPPPAPKPCKTVTTSGAKAGGGKGAG 207
>gi|27436957 membrane associated guanylate kinase, WW and PDZ domain
containing 2 [Homo sapiens]
Length = 1455
Score = 43.9 bits (102), Expect = 6e-05
Identities = 43/117 (36%), Positives = 49/117 (41%), Gaps = 15/117 (12%)
Query: 40 ECGGGRGRERRGGGTRHTHHAENCFTAFLKVAEGAAAAAPRKPRTGRGGAAATAAVTRKE 99
E GG+GR G R A A A+ A A PR AAA + + R+E
Sbjct: 1330 EAPGGQGRPEAG---RPASEARAPGLAAADAADAARAGGKEAPR-----AAAGSELCRRE 1381
Query: 100 RE-TAPARDRGGGDGGGA-----RADGLRGRSPRRRPAGRAHARSLPSAPGSPKKIP 150
APA GG G GA RA G P RP G A AR APG P K+P
Sbjct: 1382 GPGAAPAFAGPGGGGSGALEAEGRAGARAGPRPGPRPPGGAPARKAAVAPG-PWKVP 1437
>gi|158854042 hypothetical protein LOC222183 [Homo sapiens]
Length = 653
Score = 43.5 bits (101), Expect = 8e-05
Identities = 50/167 (29%), Positives = 63/167 (37%), Gaps = 27/167 (16%)
Query: 4 TRQHPRHPYPKVGSRIPSNRKCHSPPPPPSGTLTGAECGGGRGRERRGGGTRHTHHAENC 63
+R P+H G + S R S P PSG G G G +R GG+ A
Sbjct: 276 SRLSPKHR--DEGRKTGSQRSSGSRSPSPSG-------GSGWGSPQRNGGSGQRSGAHGG 326
Query: 64 FTAFLKVAEGAAAAAPRKP-----RTGRGGAAATAAVTRKERETAPARDRGGGDGGGARA 118
G+A + P KP R AAA + +E+ R G G RA
Sbjct: 327 -------RPGSAHSPPDKPSSPSPRVRDKAAAAAPTPPARGKESPSPRSAPSSQGRGGRA 379
Query: 119 DGLRGRSPRRRPAGRAHARSLPSAPGSPKKIPTLARAAGPSPTSGVS 165
G GR RRR R +RS SAP + R P+P G S
Sbjct: 380 AGGAGRR-RRRRRRRRRSRSSASAPRRRGR-----RRPRPAPPRGSS 420
Score = 40.8 bits (94), Expect = 5e-04
Identities = 47/176 (26%), Positives = 61/176 (34%), Gaps = 36/176 (20%)
Query: 8 PRHPYPKVGSRI------PSNRKCHSPPP--PPSGTLTGAECGGGRGRERRGGGTRHTHH 59
P P P+V + P R SP P PS G GG GR RR R
Sbjct: 338 PSSPSPRVRDKAAAAAPTPPARGKESPSPRSAPSSQGRGGRAAGGAGRRRRRRRRRRRSR 397
Query: 60 AENCFTAFLKVAEGAAAAAPRKPRTGRGGAAATAAVTRKERETAPARDRGGGDG------ 113
+ +A+APR+ R A +R + D G G G
Sbjct: 398 S--------------SASAPRRRGRRRPRPAPPRGSSRSLSRARSSSDSGSGRGAPGPGP 443
Query: 114 --GGARADGLRG-----RSPRRRPAGRAHARSLPSAPGSPKKIPTLARAAGPSPTS 162
G R G G R PR RPA + + G P+ + +R+ GP P S
Sbjct: 444 EPGSERGHGGHGKRAKERPPRARPASTSPSPGAHGRRGGPEG-KSSSRSPGPHPRS 498
Score = 30.8 bits (68), Expect = 0.56
Identities = 36/158 (22%), Positives = 61/158 (38%), Gaps = 23/158 (14%)
Query: 10 HPYPKVGSRIPSN-------RKCHSPP--PPPSGTLTGAECGGGRGRERRGGGTRHTHHA 60
HP SR PS ++ HSP P P L+ + G GR R TR +
Sbjct: 495 HPRSWSSSRSPSKSRSRSAEKRPHSPSRSPSPKKPLSRDKDGEGRARHSEAEATRARRRS 554
Query: 61 ENCFTAFLKVAEGAAAAAPRKPRTGR---------GGAAATAAVTRKERETAPARDRGGG 111
+ + + + PR+ + R +++++ ++ + +R G
Sbjct: 555 RSYSPIRKRRRDSPSFMEPRRITSARKRPIPYYRPSPSSSSSCLSSDYSTRSHSRSPSPG 614
Query: 112 DGGGA---RADGLRGR--SPRRRPAGRAHARSLPSAPG 144
G+ R+ G R R SP R P+ H+RS + G
Sbjct: 615 HSHGSYSSRSHGTRSRTRSPSRTPSPSYHSRSSSESGG 652
>gi|54607124 RNA binding motif protein 15B [Homo sapiens]
Length = 890
Score = 41.2 bits (95), Expect = 4e-04
Identities = 39/147 (26%), Positives = 46/147 (31%), Gaps = 27/147 (18%)
Query: 20 PSNRKCHSPPPPPSGTLTGAECGGGRGRERRGGGTRHTHHAENCFTAFLKVAEGAAAAAP 79
PS R S P AE GG R + GG +H A A P
Sbjct: 11 PSGRGSSSSAKRPREREREAEAGGRRAAHKASGGAKHPVPAR-------------ARDKP 57
Query: 80 RKPRTGRGGAAATAAVTRKERETAPARDRGGGDGGGARA------DGLRGRSPRRRPAGR 133
R +G GG + R G G GGG R G G SPR P
Sbjct: 58 RGSGSGGGGHRDGRGTGDANHRASSGRSSGSGAGGGGRGGKASGDPGASGMSPRASP--- 114
Query: 134 AHARSLPSAPGSPKKIPTLARAAGPSP 160
LP P P P ++ +P
Sbjct: 115 -----LPPPPPPPGAEPACPGSSAAAP 136
>gi|239741995 PREDICTED: hypothetical protein XP_002342368 [Homo
sapiens]
Length = 224
Score = 40.8 bits (94), Expect = 5e-04
Identities = 43/142 (30%), Positives = 61/142 (42%), Gaps = 16/142 (11%)
Query: 32 PSGTLTG----AECGGGRGRERRG-GGTRHTHHAENCFTAFLKVAEGAAAAAPRKPRTGR 86
P+G L G A GGGRG E G G R A + + AA A+PR
Sbjct: 47 PAGILEGGPQVAARGGGRGWEGGGLGARRAVTAARRGEWGRARESRSAALASPRVSNAPT 106
Query: 87 GGAAATAAVTRKERETAPARDRGGGDGGGARADGLRGRSPRRRPA----GRAHARSLPSA 142
A+ + +ER++ R GGGARA+ R P RPA G R+ +
Sbjct: 107 TPASRNPGLRAQERQSG----RRAAGGGGARAEP--PRVPPCRPAGCSGGNRSRRAAGAG 160
Query: 143 PGSPKKIPTLARAAGPSPTSGV 164
P + ++ P R G +P +G+
Sbjct: 161 PRTTRRKPP-PRPPGTAPAAGL 181
>gi|30387642 late cornified envelope 4A [Homo sapiens]
Length = 99
Score = 40.0 bits (92), Expect = 0.001
Identities = 22/59 (37%), Positives = 28/59 (47%), Gaps = 5/59 (8%)
Query: 8 PRHPYPKVGSRIPSNRKCHSPPPPPSGTLTGAECGGGRGRERRGGG---TRHTHHAENC 63
P+ P PK + PS KC S PPP + G+ GG GGG + H HH +C
Sbjct: 14 PKCPIPKYPPKCPS--KCASSCPPPISSCCGSSSGGCGCCSSEGGGCCLSHHRHHRSHC 70
>gi|41281831 neuronal PAS domain protein 3 isoform 2 [Homo sapiens]
Length = 920
Score = 40.0 bits (92), Expect = 0.001
Identities = 35/111 (31%), Positives = 42/111 (37%), Gaps = 16/111 (14%)
Query: 19 IPSNRKCHSPPPPPSGTLTGAECGGGRGRERRGGGTRHTHHAENCFTAFLKVAEGAAAAA 78
I N +S PPS + GGG G GGG H ++ T GA AA
Sbjct: 660 ISRNESPYSMTKPPSSEHFPSPQGGGGGGG--GGGGLHVAIPDSVLTP-----PGADGAA 712
Query: 79 PRKPRTGRGGAAATAAV---------TRKERETAPARDRGGGDGGGARADG 120
RK + G AA A V + R+ P GGG GGG G
Sbjct: 713 ARKTQFGASATAALAPVASDPLSPPLSASPRDKHPGNGGGGGGGGGGAGGG 763
>gi|11545847 neuronal PAS domain protein 3 isoform 1 [Homo sapiens]
Length = 901
Score = 40.0 bits (92), Expect = 0.001
Identities = 35/111 (31%), Positives = 42/111 (37%), Gaps = 16/111 (14%)
Query: 19 IPSNRKCHSPPPPPSGTLTGAECGGGRGRERRGGGTRHTHHAENCFTAFLKVAEGAAAAA 78
I N +S PPS + GGG G GGG H ++ T GA AA
Sbjct: 641 ISRNESPYSMTKPPSSEHFPSPQGGGGGGG--GGGGLHVAIPDSVLTP-----PGADGAA 693
Query: 79 PRKPRTGRGGAAATAAV---------TRKERETAPARDRGGGDGGGARADG 120
RK + G AA A V + R+ P GGG GGG G
Sbjct: 694 ARKTQFGASATAALAPVASDPLSPPLSASPRDKHPGNGGGGGGGGGGAGGG 744
>gi|239751535 PREDICTED: hypothetical protein [Homo sapiens]
Length = 255
Score = 39.7 bits (91), Expect = 0.001
Identities = 30/101 (29%), Positives = 42/101 (41%), Gaps = 13/101 (12%)
Query: 63 CFTAFLKVAEGAAAAAPRKPRTGRGG--AAATAAVTRK-------ERETAPARDRGGGDG 113
C +V + AA +PR PR G GG A A R+ R AR G G+G
Sbjct: 19 CIRGSQRVPQPPAARSPRGPRAGGGGGDAGGGGAPVRRARGGGCWARAYQDARCFGRGEG 78
Query: 114 GGARADGLRGRSP----RRRPAGRAHARSLPSAPGSPKKIP 150
G + G +P R +R +P+ PG P ++P
Sbjct: 79 GDLQVSSGPGAAPPAEFRASARSAQGSRDVPAGPGFPPRLP 119
Score = 34.7 bits (78), Expect = 0.039
Identities = 50/182 (27%), Positives = 61/182 (33%), Gaps = 45/182 (24%)
Query: 6 QHPRHPYPKV-----GSRIPSNRKCHSPPPPPSGTLTGAECGGGRG--RERRGGGT-RHT 57
QHP P+V R+P SP P +G G + GGG R RGGG
Sbjct: 8 QHPSLCTPRVQCIRGSQRVPQPPAARSPRGPRAGG-GGGDAGGGGAPVRRARGGGCWARA 66
Query: 58 HHAENCF----TAFLKVAEGAAAAAPRKPRTGRGGAAATAAV------------------ 95
+ CF L+V+ G AA P + R A + V
Sbjct: 67 YQDARCFGRGEGGDLQVSSGPGAAPPAEFRASARSAQGSRDVPAGPGFPPRLPRPFTSAS 126
Query: 96 ----TRKERETA---------PARDRGGGDGGGARADGLRGRSPRRRPAGRAHARSLPSA 142
TR R +A P R G G R G G SPR R A A + A
Sbjct: 127 FSNQTRLRRRSASALPAPRLCPQRASPGCSSPGVRGPG-GGASPRARGGNAAAALAARQA 185
Query: 143 PG 144
G
Sbjct: 186 AG 187
Score = 27.7 bits (60), Expect = 4.7
Identities = 34/127 (26%), Positives = 43/127 (33%), Gaps = 23/127 (18%)
Query: 17 SRIPSNRKCHSPPPPPSGTLTGAECGGGRGRERRGGGTRHTHHAENCFTAFLKVAEGAAA 76
S +P+ R C P + GGG RGG AA
Sbjct: 139 SALPAPRLCPQRASPGCSSPGVRGPGGGASPRARGGN---------------------AA 177
Query: 77 AAPRKPRTGRGGAAATAAVTRKERETAPARDRGGGDGGGARADGLRGRSPRRRPAGRAHA 136
AA + GG + +A V ++ A A+ G GAR R RPA R
Sbjct: 178 AALAARQAAGGGRSRSAFVAGRDAALACAQLPRRPRGAGARRGMRRRLGAGERPAPR--P 235
Query: 137 RSLPSAP 143
R P AP
Sbjct: 236 RGPPRAP 242
>gi|239746046 PREDICTED: hypothetical protein XP_002343643 [Homo
sapiens]
Length = 255
Score = 39.7 bits (91), Expect = 0.001
Identities = 30/101 (29%), Positives = 42/101 (41%), Gaps = 13/101 (12%)
Query: 63 CFTAFLKVAEGAAAAAPRKPRTGRGG--AAATAAVTRK-------ERETAPARDRGGGDG 113
C +V + AA +PR PR G GG A A R+ R AR G G+G
Sbjct: 19 CIRGSQRVPQPPAARSPRGPRAGGGGGDAGGGGAPVRRARGGGCWARAYQDARCFGRGEG 78
Query: 114 GGARADGLRGRSP----RRRPAGRAHARSLPSAPGSPKKIP 150
G + G +P R +R +P+ PG P ++P
Sbjct: 79 GDLQVSSGPGAAPPAEFRASARSAQGSRDVPAGPGFPPRLP 119
Score = 34.7 bits (78), Expect = 0.039
Identities = 50/182 (27%), Positives = 61/182 (33%), Gaps = 45/182 (24%)
Query: 6 QHPRHPYPKV-----GSRIPSNRKCHSPPPPPSGTLTGAECGGGRG--RERRGGGT-RHT 57
QHP P+V R+P SP P +G G + GGG R RGGG
Sbjct: 8 QHPSLCTPRVQCIRGSQRVPQPPAARSPRGPRAGG-GGGDAGGGGAPVRRARGGGCWARA 66
Query: 58 HHAENCF----TAFLKVAEGAAAAAPRKPRTGRGGAAATAAV------------------ 95
+ CF L+V+ G AA P + R A + V
Sbjct: 67 YQDARCFGRGEGGDLQVSSGPGAAPPAEFRASARSAQGSRDVPAGPGFPPRLPRPFTSAS 126
Query: 96 ----TRKERETA---------PARDRGGGDGGGARADGLRGRSPRRRPAGRAHARSLPSA 142
TR R +A P R G G R G G SPR R A A + A
Sbjct: 127 FSNQTRLRRRSASALPAPRLCPQRASPGCSSPGVRGPG-GGASPRARGGNAAAALAARQA 185
Query: 143 PG 144
G
Sbjct: 186 AG 187
Score = 27.7 bits (60), Expect = 4.7
Identities = 34/127 (26%), Positives = 43/127 (33%), Gaps = 23/127 (18%)
Query: 17 SRIPSNRKCHSPPPPPSGTLTGAECGGGRGRERRGGGTRHTHHAENCFTAFLKVAEGAAA 76
S +P+ R C P + GGG RGG AA
Sbjct: 139 SALPAPRLCPQRASPGCSSPGVRGPGGGASPRARGGN---------------------AA 177
Query: 77 AAPRKPRTGRGGAAATAAVTRKERETAPARDRGGGDGGGARADGLRGRSPRRRPAGRAHA 136
AA + GG + +A V ++ A A+ G GAR R RPA R
Sbjct: 178 AALAARQAAGGGRSRSAFVAGRDAALACAQLPRRPRGAGARRGMRRRLGAGERPAPR--P 235
Query: 137 RSLPSAP 143
R P AP
Sbjct: 236 RGPPRAP 242
>gi|28269693 xylosyltransferase I [Homo sapiens]
Length = 959
Score = 39.3 bits (90), Expect = 0.002
Identities = 31/85 (36%), Positives = 34/85 (40%), Gaps = 13/85 (15%)
Query: 86 RGGAAA-------TAAVTRKERETAPARD---RGGGDGGGARADGLRGRSPRRRPAGRAH 135
RGGAA A R+ER PA RGGG GGG G GR P+ R G
Sbjct: 46 RGGAAVGGGEQPPPAPAPRRERRDLPAEPAAARGGGGGGGG---GGGGRGPQARARGGGP 102
Query: 136 ARSLPSAPGSPKKIPTLARAAGPSP 160
P S +P A PSP
Sbjct: 103 GEPRGQQPASRGALPARALDPHPSP 127
>gi|239758013 PREDICTED: hypothetical protein [Homo sapiens]
Length = 819
Score = 39.3 bits (90), Expect = 0.002
Identities = 42/173 (24%), Positives = 56/173 (32%), Gaps = 43/173 (24%)
Query: 9 RHPYPKVGSRIPSNRKCHSPPPPPSGTLTGAECGGGR-------------------GRER 49
R + G RK H P P +G GG + G+ R
Sbjct: 208 REAKSRFGKTRGGRRKKHRRPKPAAGGAKSRRGGGKKPQKQRRRGQKAATGGKSRVGKSR 267
Query: 50 RGGGTRHTHHAENCFTAFLK-----------VAEGAAAAAPRK-----PRTGRGGAAATA 93
GG + +N A K A+G P+ PR GRGG
Sbjct: 268 GGGDKKLRRQGQNAALAGAKRRGAATAGEKPAAKGRGGRGPKSLGGQNPRWGRGGKKPRR 327
Query: 94 AVTRKERETAPARDRGGGDGGGARADGL--------RGRSPRRRPAGRAHARS 138
+ + A RGGG A G+ RG+ PRR+ A A A+S
Sbjct: 328 RGQKATKAAAAGTKRGGGGQQKAAVVGVKSRKKQRRRGKKPRRQKASAAGAKS 380
Score = 36.2 bits (82), Expect = 0.013
Identities = 45/153 (29%), Positives = 62/153 (40%), Gaps = 23/153 (15%)
Query: 33 SGTLTGAECGGGRGRERRGGGTRHTHHAENCFTAFLKVAEGAAAAAPRKPRTGRGGAAAT 92
+G A+ GGRG + GG + A AAAA ++ G+ AA
Sbjct: 294 AGEKPAAKGRGGRGPKSLGGQNPRWGRGGKKPRRRGQKATKAAAAGTKRGGGGQQKAAVV 353
Query: 93 AAVTRKERE------------TAPARDRGGGDGGGARADGLRG---RSPR----RRPAGR 133
+RK++ A A+ RGGGD G R RG + PR RR A +
Sbjct: 354 GVKSRKKQRRRGKKPRRQKASAAGAKSRGGGDKKGLREAKRRGDGRKKPRWQNPRRRAQK 413
Query: 134 AHARSLPSAPGSPK---KIPTLARAAGPSPTSG 163
A A + P GS K + P A++ G SG
Sbjct: 414 APA-AKPRGGGSKKPRRRGPKAAKSRGGKSRSG 445
Score = 31.2 bits (69), Expect = 0.43
Identities = 23/55 (41%), Positives = 28/55 (50%), Gaps = 9/55 (16%)
Query: 42 GGGRGRERRGGGTRHTHHAENCFTAFLKVAEGAAAAAPRKP-----RTGRGGAAA 91
GGG + RRGGG + + E TA + AAAA +KP R GRG AA
Sbjct: 760 GGGGAKRRRGGGAK-SRSGEKAVTA---GGQKAAAAGGKKPPRVKSRGGRGQKAA 810
Score = 30.8 bits (68), Expect = 0.56
Identities = 39/139 (28%), Positives = 53/139 (38%), Gaps = 21/139 (15%)
Query: 38 GAECGGGRGRE--RRG------GGTRHTHHAENCFTAFLKV----AEGAAAAAPRKPRTG 85
G + GGRGR+ RRG G + A+ A K A+ AAAAA K + G
Sbjct: 112 GTKSLGGRGRKPRRRGQKAAATGSKKPRWRAQKSAAAGSKNRGAGAQKAAAAAGVKSQGG 171
Query: 86 RGGAAATAAVTRKERETAP----ARDRGGGDGGGARADGLRGRSPRRRPAGRAHARSLPS 141
A AA + P A+ RG D G + + R + H R P+
Sbjct: 172 EKPQKAAAAGAKSRSGKKPRRRGAKSRGDEDKKGRQREAKSRFGKTRGGRRKKHRRPKPA 231
Query: 142 APGSPKKIPTLARAAGPSP 160
A G+ + R G P
Sbjct: 232 AGGAKSR-----RGGGKKP 245
Score = 30.8 bits (68), Expect = 0.56
Identities = 20/63 (31%), Positives = 31/63 (49%), Gaps = 6/63 (9%)
Query: 80 RKPRTGR----GGAAATAAVTRKERETAPARDRGGGDGGGARADGLRGRSPRRRPAGRAH 135
+KPR G+ GGA + + K R + A+ R G +++ G G +RR G A
Sbjct: 716 KKPRLGKSRGGGGAKSRGSGGAKSRGSGGAKSRSGKKAAASKSHG--GGGAKRRRGGGAK 773
Query: 136 ARS 138
+RS
Sbjct: 774 SRS 776
Score = 29.3 bits (64), Expect = 1.6
Identities = 36/147 (24%), Positives = 50/147 (34%), Gaps = 22/147 (14%)
Query: 15 VGSRIPSNRKCHSPPPPPSGTLTGAECGGG-----RGRERRGGGTRHTHHAENCFTAFLK 69
V SR R+ P + GGG R +RRG G + +
Sbjct: 355 VKSRKKQRRRGKKPRRQKASAAGAKSRGGGDKKGLREAKRRGDGRKKPRWQNP-----RR 409
Query: 70 VAEGAAAAAPR-----KPRT-------GRGGAAATAAVTRKERETAPARDRGGGDGGGAR 117
A+ A AA PR KPR RGG + + + R AR + G +R
Sbjct: 410 RAQKAPAAKPRGGGSKKPRRRGPKAAKSRGGKSRSGGGKKPRRRGQKARQKAAEAGAESR 469
Query: 118 ADGLRGRSPRRRPAGRAHARSLPSAPG 144
D +GR ++ L S G
Sbjct: 470 GDKKQGRQKASAAGTKSRGGGLKSHSG 496
Score = 29.3 bits (64), Expect = 1.6
Identities = 25/82 (30%), Positives = 37/82 (45%), Gaps = 17/82 (20%)
Query: 71 AEGAAAAAPRKPRT----GRGGAAATAAV-----TRKERETAPARDRGGG-----DGGGA 116
A G A A +KPR RG AAV R+ ++ + RGGG GGA
Sbjct: 678 AVGQEAEARKKPRRRRAKSRGDGGQNAAVGINPWQRRGKKPRLGKSRGGGGAKSRGSGGA 737
Query: 117 R---ADGLRGRSPRRRPAGRAH 135
+ + G + RS ++ A ++H
Sbjct: 738 KSRGSGGAKSRSGKKAAASKSH 759
Score = 28.9 bits (63), Expect = 2.1
Identities = 24/104 (23%), Positives = 42/104 (40%), Gaps = 14/104 (13%)
Query: 38 GAECGGGRGRERRGGGTRHTHHAENCFTAFLKV--------AEGAAAAAPRKPRTGRGGA 89
G + G + RGGG + +H +N + K A GA + ++PR +
Sbjct: 475 GRQKASAAGTKSRGGGLK-SHSGKNLWRRGQKAEAAGEKATAAGAKSRGRKQPRRQKPAV 533
Query: 90 AAT-----AAVTRKERETAPARDRGGGDGGGARADGLRGRSPRR 128
A + +R+ ++ A G GG ++ G G PR+
Sbjct: 534 AGAKSRVGGSKSRQRQKAVAAGATSHGGGGNKQSRGGGGNKPRQ 577
>gi|239756693 PREDICTED: similar to coiled-coil domain containing 92
[Homo sapiens]
Length = 272
Score = 38.9 bits (89), Expect = 0.002
Identities = 28/90 (31%), Positives = 40/90 (44%), Gaps = 12/90 (13%)
Query: 73 GAAAAAPRKPRTGRGGAAATAAVTRKERETAPARDRGGGDGGGARADGLRGRSPRRRPAG 132
G A A P + G G A A VTR R PARD G ++G RP+
Sbjct: 159 GPARAQPAQRARGPGVGARLAGVTRDGRG-GPARDAARSPQAGPGSEG-------SRPSS 210
Query: 133 RAHARSLPSAPGSPKK----IPTLARAAGP 158
R + P+ P SP + +P +++A+ P
Sbjct: 211 RKRGEAAPAPPKSPNRQPFVLPDVSKASSP 240
>gi|169204521 PREDICTED: hypothetical protein [Homo sapiens]
Length = 430
Score = 38.9 bits (89), Expect = 0.002
Identities = 43/153 (28%), Positives = 58/153 (37%), Gaps = 8/153 (5%)
Query: 17 SRIPSNRKCHSPPPPPS-GTLTGAECGGGRGRERRGGGTRHTHHAENCFTAFLKVAEGAA 75
+R P C S PP G+L E R R+ R G +R + ++ A
Sbjct: 209 NREPGVLLCFSAAPPDMVGSLERGERARIRERKGREGPSRPRRGLQGTAAGRVRADPDDA 268
Query: 76 AAAPRKPRTGRGGAAATAAVTRKERETAPARDRGGGDG-GGARADGLRGRSP-----RRR 129
+ + KP+ G GG AA E A A + G G GA GL P RR
Sbjct: 269 SLSTDKPQRGTGGPLGPAA-AGAGTEAAAAHEEGSKAGDSGAEPRGLAPHGPHPSCGERR 327
Query: 130 PAGRAHARSLPSAPGSPKKIPTLARAAGPSPTS 162
P GR R + + A AA +PT+
Sbjct: 328 PGGRWQQRRRSHEGRARGRHRVEADAADAAPTA 360
>gi|169205149 PREDICTED: hypothetical protein [Homo sapiens]
Length = 430
Score = 38.9 bits (89), Expect = 0.002
Identities = 43/153 (28%), Positives = 58/153 (37%), Gaps = 8/153 (5%)
Query: 17 SRIPSNRKCHSPPPPPS-GTLTGAECGGGRGRERRGGGTRHTHHAENCFTAFLKVAEGAA 75
+R P C S PP G+L E R R+ R G +R + ++ A
Sbjct: 209 NREPGVLLCFSAAPPDMVGSLERGERARIRERKGREGPSRPRRGLQGTAAGRVRADPDDA 268
Query: 76 AAAPRKPRTGRGGAAATAAVTRKERETAPARDRGGGDG-GGARADGLRGRSP-----RRR 129
+ + KP+ G GG AA E A A + G G GA GL P RR
Sbjct: 269 SLSTDKPQRGTGGPLGPAA-AGAGTEAAAAHEEGSKAGDSGAEPRGLAPHGPHPSCGERR 327
Query: 130 PAGRAHARSLPSAPGSPKKIPTLARAAGPSPTS 162
P GR R + + A AA +PT+
Sbjct: 328 PGGRWQQRRRSHEGRARGRHRVEADAADAAPTA 360
>gi|169204400 PREDICTED: hypothetical protein [Homo sapiens]
Length = 430
Score = 38.9 bits (89), Expect = 0.002
Identities = 43/153 (28%), Positives = 58/153 (37%), Gaps = 8/153 (5%)
Query: 17 SRIPSNRKCHSPPPPPS-GTLTGAECGGGRGRERRGGGTRHTHHAENCFTAFLKVAEGAA 75
+R P C S PP G+L E R R+ R G +R + ++ A
Sbjct: 209 NREPGVLLCFSAAPPDMVGSLERGERARIRERKGREGPSRPRRGLQGTAAGRVRADPDDA 268
Query: 76 AAAPRKPRTGRGGAAATAAVTRKERETAPARDRGGGDG-GGARADGLRGRSP-----RRR 129
+ + KP+ G GG AA E A A + G G GA GL P RR
Sbjct: 269 SLSTDKPQRGTGGPLGPAA-AGAGTEAAAAHEEGSKAGDSGAEPRGLAPHGPHPSCGERR 327
Query: 130 PAGRAHARSLPSAPGSPKKIPTLARAAGPSPTS 162
P GR R + + A AA +PT+
Sbjct: 328 PGGRWQQRRRSHEGRARGRHRVEADAADAAPTA 360
>gi|126090909 engrailed homeobox 1 [Homo sapiens]
Length = 392
Score = 38.5 bits (88), Expect = 0.003
Identities = 36/123 (29%), Positives = 41/123 (33%), Gaps = 24/123 (19%)
Query: 25 CHSPPPPP----SGTLTGAECGGGRGRERRGG-----------GTRHTHHAE-------N 62
C PPP + G GGGR RG GTR A N
Sbjct: 117 CKKEQPPPQLLVAAAARGGAGGGGRVERDRGQTAAGRDPVHPLGTRAPGAASLLCAPDAN 176
Query: 63 CFT--AFLKVAEGAAAAAPRKPRTGRGGAAATAAVTRKERETAPARDRGGGDGGGARADG 120
C A GA A+ P AAA A P+ GGG GGGA + G
Sbjct: 177 CGPPDGSQPAAAGAGASKAGNPAAAAAAAAAAVAAAAAAAAAKPSDTGGGGSGGGAGSPG 236
Query: 121 LRG 123
+G
Sbjct: 237 AQG 239
>gi|169206171 PREDICTED: hypothetical protein [Homo sapiens]
Length = 466
Score = 38.5 bits (88), Expect = 0.003
Identities = 52/164 (31%), Positives = 61/164 (37%), Gaps = 41/164 (25%)
Query: 23 RKCHSPPPPPSGTLTGAECGGGRGRERRGGGTRHTHHAENCFTAFLKVAEGAAAAAPRKP 82
R C PPS L G C G R R GG R A + + + + A P KP
Sbjct: 238 RACPGSTLPPSSVLAG--CVGTRARGH-GGVQRQRFSAPSSHSTGARTLPTPSRARPGKP 294
Query: 83 RTGRGGAAATAAVTRKERETAPARDRGGGDG-------GGARADGL-----------RGR 124
RG A PAR RGGG G G R G+ R
Sbjct: 295 AP-RGSAP-------------PARLRGGGGGSGLTQLVGSGRGSGVTHSVGTHALATRRG 340
Query: 125 SPRRRPA----GRAHARSLPS-APGSPKKIPTLARAAGPSPTSG 163
S RP G H R L S AP SP + P++ RA GP +G
Sbjct: 341 SRAPRPVGVLRGVPHFRPLSSPAPQSPPRSPSV-RAFGPRLGAG 383
>gi|169211642 PREDICTED: hypothetical protein [Homo sapiens]
Length = 378
Score = 38.5 bits (88), Expect = 0.003
Identities = 28/89 (31%), Positives = 40/89 (44%), Gaps = 12/89 (13%)
Query: 74 AAAAAPRKPRTGRGGAAATAAVTRKERETAPARDRGGGDGGGARADGLRGRSPRRRPAGR 133
AA A P + G G A A VTR R PARD G ++G RP+ R
Sbjct: 266 AARAQPAQRARGPGVGARLAGVTRDGRG-GPARDAARSPQAGPGSEG-------SRPSSR 317
Query: 134 AHARSLPSAPGSPKK----IPTLARAAGP 158
+ P+ P SP + +P +++A+ P
Sbjct: 318 KRGEAAPAPPKSPNRQPFVLPDVSKASSP 346
>gi|169210857 PREDICTED: similar to RIKEN cDNA E130309D14 [Homo
sapiens]
Length = 378
Score = 38.5 bits (88), Expect = 0.003
Identities = 28/89 (31%), Positives = 40/89 (44%), Gaps = 12/89 (13%)
Query: 74 AAAAAPRKPRTGRGGAAATAAVTRKERETAPARDRGGGDGGGARADGLRGRSPRRRPAGR 133
AA A P + G G A A VTR R PARD G ++G RP+ R
Sbjct: 266 AARAQPAQRARGPGVGARLAGVTRDGRG-GPARDAARSPQAGPGSEG-------SRPSSR 317
Query: 134 AHARSLPSAPGSPKK----IPTLARAAGP 158
+ P+ P SP + +P +++A+ P
Sbjct: 318 KRGEAAPAPPKSPNRQPFVLPDVSKASSP 346
>gi|122692281 hypothetical protein LOC645369 [Homo sapiens]
Length = 621
Score = 38.5 bits (88), Expect = 0.003
Identities = 44/130 (33%), Positives = 52/130 (40%), Gaps = 16/130 (12%)
Query: 34 GTLTGAECGGGRGRERRGGGTRHTHHAENCFTAFLKVAEGAAAAAPRKPRTGRGGAAATA 93
G GA C R RG + T L+ AEG+ A R+P G AA A
Sbjct: 392 GDAEGASCSWQRPPGERGSQEIPRGELDLSMTN-LRGAEGSMRGARREPEEPEGAVAARA 450
Query: 94 AVTRKERETAPARDRGGGDGGGARADGLRGRSPRRRPAGRA-HARSLPSAPGS--PKKIP 150
AR +GG R LR RS P RA + P +PGS P P
Sbjct: 451 -----------ARGQGGRLPRTGRYAALRRRSTSGLPDYRAPPSPEPPPSPGSADPDSSP 499
Query: 151 TLARAAGPSP 160
LA+AA PSP
Sbjct: 500 -LAKAASPSP 508
Score = 36.2 bits (82), Expect = 0.013
Identities = 32/111 (28%), Positives = 45/111 (40%), Gaps = 11/111 (9%)
Query: 56 HTHHAENCFTAFLKVAEGAAAAAPRKPRTGRGGAAAT----AAVTRKERETAPARDRGGG 111
H+ A++ A A AA+++ P GA + V + E P G G
Sbjct: 211 HSLRAKDLAAAAAAAAAAAASSSSSAPAAAPPGAIPLNGFLSYVQSRGLELKPGGCGGSG 270
Query: 112 DGGGARADGLRGRSPRR-------RPAGRAHARSLPSAPGSPKKIPTLARA 155
D GA A +G P RP G A L S+P P++ P+LA A
Sbjct: 271 DAFGAAAMLAKGSWPPHPAAPSGGRPRGAASPPDLASSPRCPREPPSLAEA 321
>gi|63175652 CREBBP/EP300 inhibitor 2 [Homo sapiens]
Length = 236
Score = 38.5 bits (88), Expect = 0.003
Identities = 31/80 (38%), Positives = 37/80 (46%), Gaps = 7/80 (8%)
Query: 82 PRTGRGGA---AATAAVTRKERETAPARDRGGGDGGGARADGLRGRSPRRRPAGRAHARS 138
P+TG A V R RE APA+ G+G A A G G P R A AR+
Sbjct: 11 PQTGAANGDRDVPQAEVGRGRREPAPAQPEEAGEGAMAAARG--GPVPAAREGRMAAARA 68
Query: 139 LPSAP--GSPKKIPTLARAA 156
P+A G+P LARAA
Sbjct: 69 APAAAARGAPVAAAALARAA 88
>gi|239752764 PREDICTED: hypothetical protein [Homo sapiens]
Length = 370
Score = 38.1 bits (87), Expect = 0.003
Identities = 40/113 (35%), Positives = 46/113 (40%), Gaps = 18/113 (15%)
Query: 70 VAEGAAAAAPRKPRTGRGGAAATAAVT---RKERETAPARDRGGGDGGGA--RADGLRGR 124
V G A P + R G GAAA A R+ R P R GGA R L G
Sbjct: 69 VIVGRRRACPGRGRGGLPGAAALGAGAQQPRRRRLAQPPGSRAPLQVGGAPRRRAHLTGG 128
Query: 125 SPRRRPAGRAHARSLPS--APG-SPKKIPT----------LARAAGPSPTSGV 164
PRRRP A A LP+ APG P T L R P+P +G+
Sbjct: 129 PPRRRPPRLAAAHGLPASEAPGLRPDSARTRLRLRLASARLPRGLPPAPAAGL 181
Score = 29.6 bits (65), Expect = 1.2
Identities = 42/164 (25%), Positives = 50/164 (30%), Gaps = 31/164 (18%)
Query: 18 RIPSNRKCHSPPPPPSGTLTGAECGGGR------------GRERRGGGTRHTHHAENCFT 65
R+ S R PP P+ L A C R G + G H T
Sbjct: 163 RLASARLPRGLPPAPAAGLWRAGCTRLRPLLLQPPPMLSPGLAQSPGVELHAR------T 216
Query: 66 AFLKVAEGAAAAAPRKPRTGRGGAAATAAVTRKERETAPARDR------GGGDGGGARAD 119
L A P P R +A + A T A A R GGG+G
Sbjct: 217 LSLPAPSPAPCLPPPAPPAARTPSAHSPAHTHFTLTLAEAHTRALTPARGGGEGDPGPIV 276
Query: 120 GLRGRSPRRRPAGRAHARSLPSAPGSPKKIPTLARAAGPSPTSG 163
G RP S S P P +P+ ARA P G
Sbjct: 277 G-------GRPENEDSLASQTSPPAPPAPVPSTARARSPGARRG 313
Score = 28.1 bits (61), Expect = 3.6
Identities = 27/81 (33%), Positives = 31/81 (38%), Gaps = 14/81 (17%)
Query: 94 AVTRKERETAPARDRGGGDGGGARADGLRGRSPRRR----PAGRAHARSLPSAP------ 143
AV R P R RGG GA A G + PRRR P G + AP
Sbjct: 68 AVIVGRRRACPGRGRGGLP--GAAALGAGAQQPRRRRLAQPPGSRAPLQVGGAPRRRAHL 125
Query: 144 --GSPKKIPTLARAAGPSPTS 162
G P++ P AA P S
Sbjct: 126 TGGPPRRRPPRLAAAHGLPAS 146
>gi|239748099 PREDICTED: hypothetical protein [Homo sapiens]
Length = 295
Score = 38.1 bits (87), Expect = 0.003
Identities = 48/161 (29%), Positives = 66/161 (40%), Gaps = 31/161 (19%)
Query: 32 PSGTLTG----AECGGGRGRERRGGGTRHTHHAENCFTAFLKVA-----EGAAAAAPRKP 82
P+G L G A GGGRG E G G R A A +A E A + P
Sbjct: 95 PAGILEGGPQVAARGGGRGWEGGGLGARRAVTAARRGGASRPLAGEPWREAARRRPQQCP 154
Query: 83 RTGRGGAAATAAVTRKERETAP-----------ARDRGGG----DGGGARADGLRGRSPR 127
+ GR + +AA+ AP A++R G GGGARA+ R P
Sbjct: 155 QWGRARESRSAALASPRVSNAPTTPASRNPGLRAQERQSGRRAAGGGGARAEP--PRVPP 212
Query: 128 RRPA----GRAHARSLPSAPGSPKKIPTLARAAGPSPTSGV 164
RPA G R+ + P + ++ P R G +P +G+
Sbjct: 213 CRPAGCSGGNRSRRAAGAGPRTTRRKPP-PRPPGTAPAAGL 252
>gi|239747300 PREDICTED: hypothetical protein XP_002346414 [Homo
sapiens]
Length = 470
Score = 38.1 bits (87), Expect = 0.003
Identities = 40/113 (35%), Positives = 46/113 (40%), Gaps = 18/113 (15%)
Query: 70 VAEGAAAAAPRKPRTGRGGAAATAAVT---RKERETAPARDRGGGDGGGA--RADGLRGR 124
V G A P + R G GAAA A R+ R P R GGA R L G
Sbjct: 69 VIVGRRRACPGRGRGGLPGAAALGAGAQQPRRRRLAQPPGSRAPLQVGGAPRRRAHLTGG 128
Query: 125 SPRRRPAGRAHARSLPS--APG-SPKKIPT----------LARAAGPSPTSGV 164
PRRRP A A LP+ APG P T L R P+P +G+
Sbjct: 129 PPRRRPPRLAAAHGLPASEAPGLRPDSARTRLRLRLASARLPRGLPPAPAAGL 181
Score = 28.1 bits (61), Expect = 3.6
Identities = 27/81 (33%), Positives = 31/81 (38%), Gaps = 14/81 (17%)
Query: 94 AVTRKERETAPARDRGGGDGGGARADGLRGRSPRRR----PAGRAHARSLPSAP------ 143
AV R P R RGG GA A G + PRRR P G + AP
Sbjct: 68 AVIVGRRRACPGRGRGGLP--GAAALGAGAQQPRRRRLAQPPGSRAPLQVGGAPRRRAHL 125
Query: 144 --GSPKKIPTLARAAGPSPTS 162
G P++ P AA P S
Sbjct: 126 TGGPPRRRPPRLAAAHGLPAS 146
>gi|239741124 PREDICTED: hypothetical protein XP_002342114 [Homo
sapiens]
Length = 470
Score = 38.1 bits (87), Expect = 0.003
Identities = 40/113 (35%), Positives = 46/113 (40%), Gaps = 18/113 (15%)
Query: 70 VAEGAAAAAPRKPRTGRGGAAATAAVT---RKERETAPARDRGGGDGGGA--RADGLRGR 124
V G A P + R G GAAA A R+ R P R GGA R L G
Sbjct: 69 VIVGRRRACPGRGRGGLPGAAALGAGAQQPRRRRLAQPPGSRAPLQVGGAPRRRAHLTGG 128
Query: 125 SPRRRPAGRAHARSLPS--APG-SPKKIPT----------LARAAGPSPTSGV 164
PRRRP A A LP+ APG P T L R P+P +G+
Sbjct: 129 PPRRRPPRLAAAHGLPASEAPGLRPDSARTRLRLRLASARLPRGLPPAPAAGL 181
Score = 28.1 bits (61), Expect = 3.6
Identities = 27/81 (33%), Positives = 31/81 (38%), Gaps = 14/81 (17%)
Query: 94 AVTRKERETAPARDRGGGDGGGARADGLRGRSPRRR----PAGRAHARSLPSAP------ 143
AV R P R RGG GA A G + PRRR P G + AP
Sbjct: 68 AVIVGRRRACPGRGRGGLP--GAAALGAGAQQPRRRRLAQPPGSRAPLQVGGAPRRRAHL 125
Query: 144 --GSPKKIPTLARAAGPSPTS 162
G P++ P AA P S
Sbjct: 126 TGGPPRRRPPRLAAAHGLPAS 146
>gi|61835232 growth differentiation factor 7 preproprotein [Homo
sapiens]
Length = 450
Score = 38.1 bits (87), Expect = 0.003
Identities = 43/134 (32%), Positives = 52/134 (38%), Gaps = 11/134 (8%)
Query: 2 EVTRQHPRHPYPKVGSRIPSNRKCHSPPPPPSGTLT---GAECGGGRGRERRGG--GTRH 56
+ R+H R P P + R P P P G GGG E R +
Sbjct: 215 DAMRRHRREPRPPRAFCLLL-RAVAGPVPSPLALRRLGFGWPGGGGSAAEERAVLVVSSR 273
Query: 57 THHAENCFTAFLKVAE--GAAAAAPRKPRTGRGGAAATAAV-TRKERETAPA--RDRGGG 111
T E+ F A GAA A+ P G G A+ A + R+ R TA A R G
Sbjct: 274 TQRKESLFREIRAQARALGAALASEPLPDPGTGTASPRAVIGGRRRRRTALAGTRTAQGS 333
Query: 112 DGGGARADGLRGRS 125
GG R G RGRS
Sbjct: 334 GGGAGRGHGRRGRS 347
Database: hs.faa
Posted date: Aug 4, 2009 4:42 PM
Number of letters in database: 18,247,518
Number of sequences in database: 37,866
Lambda K H
0.313 0.132 0.410
Gapped
Lambda K H
0.267 0.0410 0.140
Matrix: BLOSUM62
Gap Penalties: Existence: 11, Extension: 1
Number of Hits to DB: 9,460,600
Number of Sequences: 37866
Number of extensions: 599874
Number of successful extensions: 6035
Number of sequences better than 10.0: 30
Number of HSP's better than 10.0 without gapping: 186
Number of HSP's successfully gapped in prelim test: 611
Number of HSP's that attempted gapping in prelim test: 4688
Number of HSP's gapped (non-prelim): 1612
length of query: 165
length of database: 18,247,518
effective HSP length: 94
effective length of query: 71
effective length of database: 14,688,114
effective search space: 1042856094
effective search space used: 1042856094
T: 11
A: 40
X1: 16 ( 7.2 bits)
X2: 38 (14.6 bits)
X3: 64 (24.7 bits)
S1: 42 (21.9 bits)
S2: 58 (26.9 bits)
Search results were obtained with NCBI BLAST and RefSeq entries.
Home |
Table of Contents |
Search text |
Search genes |
Search sequences |
Purchase |
FAQ |
Blog |
Help
Guide to the Human Genome
Copyright © 2010 by Stewart Scherer. All rights reserved.