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Search of human proteins with 238776795
BLASTP 2.2.11 [Jun-05-2005]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= gi|238776795 SVH protein isoform c [Homo sapiens]
(284 letters)
Database: hs.faa
37,866 sequences; 18,247,518 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
gi|238776795 SVH protein isoform c [Homo sapiens] 558 e-159
gi|31377663 SVH protein isoform a [Homo sapiens] 519 e-147
gi|238776799 SVH protein isoform d [Homo sapiens] 467 e-132
gi|169165524 PREDICTED: similar to SVH protein isoform 2 [Homo s... 422 e-118
gi|113415138 PREDICTED: similar to SVH protein isoform 2 [Homo s... 419 e-117
gi|169165133 PREDICTED: similar to SVH protein isoform 1 [Homo s... 419 e-117
gi|238776793 SVH protein isoform b [Homo sapiens] 417 e-117
gi|169165522 PREDICTED: similar to SVH protein isoform 1 [Homo s... 410 e-115
gi|238776801 SVH protein isoform f [Homo sapiens] 410 e-115
gi|238776797 SVH protein isoform e [Homo sapiens] 409 e-114
gi|169165931 PREDICTED: similar to SVH protein isoform 1 [Homo s... 407 e-114
gi|113414573 PREDICTED: similar to SVH protein isoform 2 [Homo s... 407 e-114
gi|29540566 armadillo repeat containing, X-linked 3 [Homo sapiens] 182 2e-46
gi|29540564 armadillo repeat containing, X-linked 3 [Homo sapiens] 182 2e-46
gi|7705274 armadillo repeat containing, X-linked 3 [Homo sapiens] 182 2e-46
gi|7706143 armadillo repeat containing, X-linked 1 [Homo sapiens] 169 2e-42
gi|7662162 ALEX2 protein [Homo sapiens] 110 1e-24
gi|29540562 ALEX2 protein [Homo sapiens] 110 1e-24
gi|239757861 PREDICTED: similar to armadillo repeat containing, ... 97 2e-20
gi|41054846 armadillo repeat containing, X-linked 5 [Homo sapiens] 77 2e-14
gi|34147335 armadillo repeat containing, X-linked 6 [Homo sapiens] 67 2e-11
gi|57546906 armadillo repeat containing, X-linked 6 [Homo sapiens] 67 2e-11
gi|51702248 G protein-coupled receptor associated sorting protei... 60 3e-09
gi|19923967 G protein-coupled receptor associated sorting protei... 60 3e-09
gi|150378528 G protein-coupled receptor associated sorting prote... 52 8e-07
gi|150378489 G protein-coupled receptor associated sorting prote... 52 8e-07
gi|103472136 G protein-coupled receptor associated sorting prote... 52 8e-07
gi|216547715 basic helix-loop-helix domain containing, class B, ... 45 9e-05
gi|216547682 basic helix-loop-helix domain containing, class B, ... 45 9e-05
gi|216547672 basic helix-loop-helix domain containing, class B, ... 45 9e-05
>gi|238776795 SVH protein isoform c [Homo sapiens]
Length = 284
Score = 558 bits (1439), Expect = e-159
Identities = 284/284 (100%), Positives = 284/284 (100%)
Query: 1 MGGPRGAGWVAAGLLLGAGACYCIYRLTRGRRRGDRELGIRSSKSAGALEEGTSEGQLCG 60
MGGPRGAGWVAAGLLLGAGACYCIYRLTRGRRRGDRELGIRSSKSAGALEEGTSEGQLCG
Sbjct: 1 MGGPRGAGWVAAGLLLGAGACYCIYRLTRGRRRGDRELGIRSSKSAGALEEGTSEGQLCG 60
Query: 61 RSARPQTGGTWESQWSKTSQPEDLTDGSYDDVLNAEQLQKLLYLLESTEDPVIIERALIT 120
RSARPQTGGTWESQWSKTSQPEDLTDGSYDDVLNAEQLQKLLYLLESTEDPVIIERALIT
Sbjct: 61 RSARPQTGGTWESQWSKTSQPEDLTDGSYDDVLNAEQLQKLLYLLESTEDPVIIERALIT 120
Query: 121 LGNNAAFSVNQAIIRELGGIPIVANKINHSNQSIKEKALNALNNLSVNVENQIKIKVQVL 180
LGNNAAFSVNQAIIRELGGIPIVANKINHSNQSIKEKALNALNNLSVNVENQIKIKVQVL
Sbjct: 121 LGNNAAFSVNQAIIRELGGIPIVANKINHSNQSIKEKALNALNNLSVNVENQIKIKVQVL 180
Query: 181 KLLLNLSENPAMTEGLLRAQVDSSFLSLYDSHVAKEILLRVLTLFQNIKNCLKIEGHLAV 240
KLLLNLSENPAMTEGLLRAQVDSSFLSLYDSHVAKEILLRVLTLFQNIKNCLKIEGHLAV
Sbjct: 181 KLLLNLSENPAMTEGLLRAQVDSSFLSLYDSHVAKEILLRVLTLFQNIKNCLKIEGHLAV 240
Query: 241 QPTFTEGSLFFLLHGEECAQKIRALVDHHDAEVKEKVVTIIPKI 284
QPTFTEGSLFFLLHGEECAQKIRALVDHHDAEVKEKVVTIIPKI
Sbjct: 241 QPTFTEGSLFFLLHGEECAQKIRALVDHHDAEVKEKVVTIIPKI 284
>gi|31377663 SVH protein isoform a [Homo sapiens]
Length = 343
Score = 519 bits (1337), Expect = e-147
Identities = 278/343 (81%), Positives = 281/343 (81%), Gaps = 59/343 (17%)
Query: 1 MGGPRGAGWVAAGLLLGAGACYCIYRLTRGRRRGDRELGIRSSKSAGALEEGTSEGQLCG 60
MGGPRGAGWVAAGLLLGAGACYCIYRLTRGRRRGDRELGIRSSKSAGALEEGTSEGQLCG
Sbjct: 1 MGGPRGAGWVAAGLLLGAGACYCIYRLTRGRRRGDRELGIRSSKSAGALEEGTSEGQLCG 60
Query: 61 RSARPQTGGTWESQWSKTSQPEDLTDGSYDDVLNAEQLQKLLYLLESTEDPVIIERALIT 120
RSARPQTGGTWESQWSKTSQPEDLTDGSYDDVLNAEQLQKLLYLLESTEDPVIIERALIT
Sbjct: 61 RSARPQTGGTWESQWSKTSQPEDLTDGSYDDVLNAEQLQKLLYLLESTEDPVIIERALIT 120
Query: 121 LGNNAAFSVNQAIIRELGGIPIVANKINHSNQSIKEKALNALNNLSVNVENQIKIKVQV- 179
LGNNAAFSVNQAIIRELGGIPIVANKINHSNQSIKEKALNALNNLSVNVENQIKIK+ +
Sbjct: 121 LGNNAAFSVNQAIIRELGGIPIVANKINHSNQSIKEKALNALNNLSVNVENQIKIKIYIS 180
Query: 180 -------------------LKLLLNL---------------------------------- 186
L LL N+
Sbjct: 181 QVCEDVFSGPLNSAVQLAGLTLLTNMTVTNDHQHMLHSYITDLFQVLLTGNGNTKVQVLK 240
Query: 187 -----SENPAMTEGLLRAQVDSSFLSLYDSHVAKEILLRVLTLFQNIKNCLKIEGHLAVQ 241
SENPAMTEGLLRAQVDSSFLSLYDSHVAKEILLRVLTLFQNIKNCLKIEGHLAVQ
Sbjct: 241 LLLNLSENPAMTEGLLRAQVDSSFLSLYDSHVAKEILLRVLTLFQNIKNCLKIEGHLAVQ 300
Query: 242 PTFTEGSLFFLLHGEECAQKIRALVDHHDAEVKEKVVTIIPKI 284
PTFTEGSLFFLLHGEECAQKIRALVDHHDAEVKEKVVTIIPKI
Sbjct: 301 PTFTEGSLFFLLHGEECAQKIRALVDHHDAEVKEKVVTIIPKI 343
>gi|238776799 SVH protein isoform d [Homo sapiens]
Length = 249
Score = 467 bits (1201), Expect = e-132
Identities = 249/284 (87%), Positives = 249/284 (87%), Gaps = 35/284 (12%)
Query: 1 MGGPRGAGWVAAGLLLGAGACYCIYRLTRGRRRGDRELGIRSSKSAGALEEGTSEGQLCG 60
MGGPRGAGWVAAGLLLGAGACYCIYRLTRGRRRGDRELGIRSSKSA
Sbjct: 1 MGGPRGAGWVAAGLLLGAGACYCIYRLTRGRRRGDRELGIRSSKSA-------------- 46
Query: 61 RSARPQTGGTWESQWSKTSQPEDLTDGSYDDVLNAEQLQKLLYLLESTEDPVIIERALIT 120
EDLTDGSYDDVLNAEQLQKLLYLLESTEDPVIIERALIT
Sbjct: 47 ---------------------EDLTDGSYDDVLNAEQLQKLLYLLESTEDPVIIERALIT 85
Query: 121 LGNNAAFSVNQAIIRELGGIPIVANKINHSNQSIKEKALNALNNLSVNVENQIKIKVQVL 180
LGNNAAFSVNQAIIRELGGIPIVANKINHSNQSIKEKALNALNNLSVNVENQIKIKVQVL
Sbjct: 86 LGNNAAFSVNQAIIRELGGIPIVANKINHSNQSIKEKALNALNNLSVNVENQIKIKVQVL 145
Query: 181 KLLLNLSENPAMTEGLLRAQVDSSFLSLYDSHVAKEILLRVLTLFQNIKNCLKIEGHLAV 240
KLLLNLSENPAMTEGLLRAQVDSSFLSLYDSHVAKEILLRVLTLFQNIKNCLKIEGHLAV
Sbjct: 146 KLLLNLSENPAMTEGLLRAQVDSSFLSLYDSHVAKEILLRVLTLFQNIKNCLKIEGHLAV 205
Query: 241 QPTFTEGSLFFLLHGEECAQKIRALVDHHDAEVKEKVVTIIPKI 284
QPTFTEGSLFFLLHGEECAQKIRALVDHHDAEVKEKVVTIIPKI
Sbjct: 206 QPTFTEGSLFFLLHGEECAQKIRALVDHHDAEVKEKVVTIIPKI 249
>gi|169165524 PREDICTED: similar to SVH protein isoform 2 [Homo
sapiens]
Length = 253
Score = 422 bits (1084), Expect = e-118
Identities = 228/288 (79%), Positives = 236/288 (81%), Gaps = 39/288 (13%)
Query: 1 MGGPRGAGWVAAGLLLGAGACYCIYRLTRGRRRGDRELGIRSSKSAGALEEGTSEGQLCG 60
MGGPRGAGWVAAGLLLGAGACYCIYRLTRGRRRGDRELGIRSSKSA
Sbjct: 1 MGGPRGAGWVAAGLLLGAGACYCIYRLTRGRRRGDRELGIRSSKSA-------------- 46
Query: 61 RSARPQTGGTWESQWSKTSQPEDLTDGSYDDVLNAEQLQKLLYLLESTEDPVIIERALIT 120
EDLTDGSYDDVLNAEQLQKLLYLLESTEDPVIIERALIT
Sbjct: 47 ---------------------EDLTDGSYDDVLNAEQLQKLLYLLESTEDPVIIERALIT 85
Query: 121 LGNNAAFSVNQAIIRELGGIPIVANKINHSNQSIKEKALNALNNLSVNVENQIKIKVQVL 180
LGNNAAFSVNQAIIRELGGIPIVANKINHSNQSIKEKALNALNNLSVNVENQIKIK+ +
Sbjct: 86 LGNNAAFSVNQAIIRELGGIPIVANKINHSNQSIKEKALNALNNLSVNVENQIKIKIYIS 145
Query: 181 KLLLNLSENPAMTEGLL----RAQVDSSFLSLYDSHVAKEILLRVLTLFQNIKNCLKIEG 236
++ ++ P + LL +VDSSFLSLYDSHVAKEILLRVLTLFQNIKNCLKIEG
Sbjct: 146 QVCEDVFSGPLNSAVLLTGNGNTKVDSSFLSLYDSHVAKEILLRVLTLFQNIKNCLKIEG 205
Query: 237 HLAVQPTFTEGSLFFLLHGEECAQKIRALVDHHDAEVKEKVVTIIPKI 284
HLAVQPTFTEGSLFFLLHGEECAQKIRALVDHHDAEVKEKVVTIIPKI
Sbjct: 206 HLAVQPTFTEGSLFFLLHGEECAQKIRALVDHHDAEVKEKVVTIIPKI 253
>gi|113415138 PREDICTED: similar to SVH protein isoform 2 [Homo
sapiens]
Length = 253
Score = 419 bits (1076), Expect = e-117
Identities = 226/288 (78%), Positives = 236/288 (81%), Gaps = 39/288 (13%)
Query: 1 MGGPRGAGWVAAGLLLGAGACYCIYRLTRGRRRGDRELGIRSSKSAGALEEGTSEGQLCG 60
MGGPRGAGWVAAGLLLGAGACYCIYRLTRGRRRGDRELGIRSSKSA
Sbjct: 1 MGGPRGAGWVAAGLLLGAGACYCIYRLTRGRRRGDRELGIRSSKSA-------------- 46
Query: 61 RSARPQTGGTWESQWSKTSQPEDLTDGSYDDVLNAEQLQKLLYLLESTEDPVIIERALIT 120
EDLTDGSYDDVLNAEQLQKLLYLLESTEDPVIIERALIT
Sbjct: 47 ---------------------EDLTDGSYDDVLNAEQLQKLLYLLESTEDPVIIERALIT 85
Query: 121 LGNNAAFSVNQAIIRELGGIPIVANKINHSNQSIKEKALNALNNLSVNVENQIKIKVQVL 180
LGNNAAFSVNQAIIRELGGIPIVANKINHSNQSIK+KALNALNNLSVNVENQIKIK+ +
Sbjct: 86 LGNNAAFSVNQAIIRELGGIPIVANKINHSNQSIKDKALNALNNLSVNVENQIKIKIYIS 145
Query: 181 KLLLNLSENPAMTEGLL----RAQVDSSFLSLYDSHVAKEILLRVLTLFQNIKNCLKIEG 236
++ ++ P + LL +VDSSFLSLYDSHVAKEILLRVLTLFQ+IKNCLKIEG
Sbjct: 146 QVCEDVFSGPLNSAVLLTGNGNTKVDSSFLSLYDSHVAKEILLRVLTLFQHIKNCLKIEG 205
Query: 237 HLAVQPTFTEGSLFFLLHGEECAQKIRALVDHHDAEVKEKVVTIIPKI 284
HLAVQPTFTEGSLFFLLHGEECAQKIRALVDHHDAEVKEKVVTIIPKI
Sbjct: 206 HLAVQPTFTEGSLFFLLHGEECAQKIRALVDHHDAEVKEKVVTIIPKI 253
>gi|169165133 PREDICTED: similar to SVH protein isoform 1 [Homo
sapiens]
Length = 253
Score = 419 bits (1076), Expect = e-117
Identities = 226/288 (78%), Positives = 236/288 (81%), Gaps = 39/288 (13%)
Query: 1 MGGPRGAGWVAAGLLLGAGACYCIYRLTRGRRRGDRELGIRSSKSAGALEEGTSEGQLCG 60
MGGPRGAGWVAAGLLLGAGACYCIYRLTRGRRRGDRELGIRSSKSA
Sbjct: 1 MGGPRGAGWVAAGLLLGAGACYCIYRLTRGRRRGDRELGIRSSKSA-------------- 46
Query: 61 RSARPQTGGTWESQWSKTSQPEDLTDGSYDDVLNAEQLQKLLYLLESTEDPVIIERALIT 120
EDLTDGSYDDVLNAEQLQKLLYLLESTEDPVIIERALIT
Sbjct: 47 ---------------------EDLTDGSYDDVLNAEQLQKLLYLLESTEDPVIIERALIT 85
Query: 121 LGNNAAFSVNQAIIRELGGIPIVANKINHSNQSIKEKALNALNNLSVNVENQIKIKVQVL 180
LGNNAAFSVNQAIIRELGGIPIVANKINHSNQSIK+KALNALNNLSVNVENQIKIK+ +
Sbjct: 86 LGNNAAFSVNQAIIRELGGIPIVANKINHSNQSIKDKALNALNNLSVNVENQIKIKIYIS 145
Query: 181 KLLLNLSENPAMTEGLL----RAQVDSSFLSLYDSHVAKEILLRVLTLFQNIKNCLKIEG 236
++ ++ P + LL +VDSSFLSLYDSHVAKEILLRVLTLFQ+IKNCLKIEG
Sbjct: 146 QVCEDVFSGPLNSAVLLTGNGNTKVDSSFLSLYDSHVAKEILLRVLTLFQHIKNCLKIEG 205
Query: 237 HLAVQPTFTEGSLFFLLHGEECAQKIRALVDHHDAEVKEKVVTIIPKI 284
HLAVQPTFTEGSLFFLLHGEECAQKIRALVDHHDAEVKEKVVTIIPKI
Sbjct: 206 HLAVQPTFTEGSLFFLLHGEECAQKIRALVDHHDAEVKEKVVTIIPKI 253
>gi|238776793 SVH protein isoform b [Homo sapiens]
Length = 308
Score = 417 bits (1073), Expect = e-117
Identities = 239/343 (69%), Positives = 244/343 (71%), Gaps = 94/343 (27%)
Query: 1 MGGPRGAGWVAAGLLLGAGACYCIYRLTRGRRRGDRELGIRSSKSAGALEEGTSEGQLCG 60
MGGPRGAGWVAAGLLLGAGACYCIYRLTRGRRRGDRELGIRSSKSA
Sbjct: 1 MGGPRGAGWVAAGLLLGAGACYCIYRLTRGRRRGDRELGIRSSKSA-------------- 46
Query: 61 RSARPQTGGTWESQWSKTSQPEDLTDGSYDDVLNAEQLQKLLYLLESTEDPVIIERALIT 120
EDLTDGSYDDVLNAEQLQKLLYLLESTEDPVIIERALIT
Sbjct: 47 ---------------------EDLTDGSYDDVLNAEQLQKLLYLLESTEDPVIIERALIT 85
Query: 121 LGNNAAFSVNQAIIRELGGIPIVANKINHSNQSIKEKALNA------------------- 161
LGNNAAFSVNQAIIRELGGIPIVANKINHSNQSIKEKALNA
Sbjct: 86 LGNNAAFSVNQAIIRELGGIPIVANKINHSNQSIKEKALNALNNLSVNVENQIKIKIYIS 145
Query: 162 ----------------------LNNLSVNVENQIKI------------------KVQVLK 181
L N++V ++Q + KVQVLK
Sbjct: 146 QVCEDVFSGPLNSAVQLAGLTLLTNMTVTNDHQHMLHSYITDLFQVLLTGNGNTKVQVLK 205
Query: 182 LLLNLSENPAMTEGLLRAQVDSSFLSLYDSHVAKEILLRVLTLFQNIKNCLKIEGHLAVQ 241
LLLNLSENPAMTEGLLRAQVDSSFLSLYDSHVAKEILLRVLTLFQNIKNCLKIEGHLAVQ
Sbjct: 206 LLLNLSENPAMTEGLLRAQVDSSFLSLYDSHVAKEILLRVLTLFQNIKNCLKIEGHLAVQ 265
Query: 242 PTFTEGSLFFLLHGEECAQKIRALVDHHDAEVKEKVVTIIPKI 284
PTFTEGSLFFLLHGEECAQKIRALVDHHDAEVKEKVVTIIPKI
Sbjct: 266 PTFTEGSLFFLLHGEECAQKIRALVDHHDAEVKEKVVTIIPKI 308
>gi|169165522 PREDICTED: similar to SVH protein isoform 1 [Homo
sapiens]
Length = 284
Score = 410 bits (1055), Expect = e-115
Identities = 230/319 (72%), Positives = 237/319 (74%), Gaps = 70/319 (21%)
Query: 1 MGGPRGAGWVAAGLLLGAGACYCIYRLTRGRRRGDRELGIRSSKSAGALEEGTSEGQLCG 60
MGGPRGAGWVAAGLLLGAGACYCIYRLTRGRRRGDRELGIRSSKSA
Sbjct: 1 MGGPRGAGWVAAGLLLGAGACYCIYRLTRGRRRGDRELGIRSSKSA-------------- 46
Query: 61 RSARPQTGGTWESQWSKTSQPEDLTDGSYDDVLNAEQLQKLLYLLESTEDPVIIERALIT 120
EDLTDGSYDDVLNAEQLQKLLYLLESTEDPVIIERALIT
Sbjct: 47 ---------------------EDLTDGSYDDVLNAEQLQKLLYLLESTEDPVIIERALIT 85
Query: 121 LGNNAAFSVNQAIIRELGGIPIVANKINHSNQSIKEKALNALNNLSVNVENQIKIKVQV- 179
LGNNAAFSVNQAIIRELGGIPIVANKINHSNQSIKEKALNALNNLSVNVENQIKIK+ +
Sbjct: 86 LGNNAAFSVNQAIIRELGGIPIVANKINHSNQSIKEKALNALNNLSVNVENQIKIKIYIS 145
Query: 180 -------------------LKLLLNLSEN---------------PAMTEGLLRAQVDSSF 205
L+LL N++ + G +VDSSF
Sbjct: 146 QVCEDVFSGPLNSAVQLAGLRLLTNMTVTNDHQHMLHSYITDLFQVLLTGNGNTKVDSSF 205
Query: 206 LSLYDSHVAKEILLRVLTLFQNIKNCLKIEGHLAVQPTFTEGSLFFLLHGEECAQKIRAL 265
LSLYDSHVAKEILLRVLTLFQNIKNCLKIEGHLAVQPTFTEGSLFFLLHGEECAQKIRAL
Sbjct: 206 LSLYDSHVAKEILLRVLTLFQNIKNCLKIEGHLAVQPTFTEGSLFFLLHGEECAQKIRAL 265
Query: 266 VDHHDAEVKEKVVTIIPKI 284
VDHHDAEVKEKVVTIIPKI
Sbjct: 266 VDHHDAEVKEKVVTIIPKI 284
>gi|238776801 SVH protein isoform f [Homo sapiens]
Length = 225
Score = 410 bits (1053), Expect = e-115
Identities = 225/284 (79%), Positives = 225/284 (79%), Gaps = 59/284 (20%)
Query: 1 MGGPRGAGWVAAGLLLGAGACYCIYRLTRGRRRGDRELGIRSSKSAGALEEGTSEGQLCG 60
MGGPRGAGWVAAGLLLGAGACYCIYRLTRGRRRGDRELGIRSSKSA
Sbjct: 1 MGGPRGAGWVAAGLLLGAGACYCIYRLTRGRRRGDRELGIRSSKSA-------------- 46
Query: 61 RSARPQTGGTWESQWSKTSQPEDLTDGSYDDVLNAEQLQKLLYLLESTEDPVIIERALIT 120
EDLTDGSYDDVLNAEQLQKLLYLLESTEDPVIIERALIT
Sbjct: 47 ---------------------EDLTDGSYDDVLNAEQLQKLLYLLESTEDPVIIERALIT 85
Query: 121 LGNNAAFSVNQAIIRELGGIPIVANKINHSNQSIKEKALNALNNLSVNVENQIKIKVQVL 180
LGNNAAFSVNQAIIRELGGIPIVANKINHSNQSIKEKALNALNNLSVNVENQIKIK
Sbjct: 86 LGNNAAFSVNQAIIRELGGIPIVANKINHSNQSIKEKALNALNNLSVNVENQIKIK---- 141
Query: 181 KLLLNLSENPAMTEGLLRAQVDSSFLSLYDSHVAKEILLRVLTLFQNIKNCLKIEGHLAV 240
VDSSFLSLYDSHVAKEILLRVLTLFQNIKNCLKIEGHLAV
Sbjct: 142 --------------------VDSSFLSLYDSHVAKEILLRVLTLFQNIKNCLKIEGHLAV 181
Query: 241 QPTFTEGSLFFLLHGEECAQKIRALVDHHDAEVKEKVVTIIPKI 284
QPTFTEGSLFFLLHGEECAQKIRALVDHHDAEVKEKVVTIIPKI
Sbjct: 182 QPTFTEGSLFFLLHGEECAQKIRALVDHHDAEVKEKVVTIIPKI 225
>gi|238776797 SVH protein isoform e [Homo sapiens]
Length = 284
Score = 409 bits (1052), Expect = e-114
Identities = 230/319 (72%), Positives = 236/319 (73%), Gaps = 70/319 (21%)
Query: 1 MGGPRGAGWVAAGLLLGAGACYCIYRLTRGRRRGDRELGIRSSKSAGALEEGTSEGQLCG 60
MGGPRGAGWVAAGLLLGAGACYCIYRLTRGRRRGDRELGIRSSKSA
Sbjct: 1 MGGPRGAGWVAAGLLLGAGACYCIYRLTRGRRRGDRELGIRSSKSA-------------- 46
Query: 61 RSARPQTGGTWESQWSKTSQPEDLTDGSYDDVLNAEQLQKLLYLLESTEDPVIIERALIT 120
EDLTDGSYDDVLNAEQLQKLLYLLESTEDPVIIERALIT
Sbjct: 47 ---------------------EDLTDGSYDDVLNAEQLQKLLYLLESTEDPVIIERALIT 85
Query: 121 LGNNAAFSVNQAIIRELGGIPIVANKINHSNQSIKEKALNALNNLSVNVENQIKIKVQV- 179
LGNNAAFSVNQAIIRELGGIPIVANKINHSNQSIKEKALNALNNLSVNVENQIKIK+ +
Sbjct: 86 LGNNAAFSVNQAIIRELGGIPIVANKINHSNQSIKEKALNALNNLSVNVENQIKIKIYIS 145
Query: 180 -------------------LKLLLNLSEN---------------PAMTEGLLRAQVDSSF 205
L LL N++ + G +VDSSF
Sbjct: 146 QVCEDVFSGPLNSAVQLAGLTLLTNMTVTNDHQHMLHSYITDLFQVLLTGNGNTKVDSSF 205
Query: 206 LSLYDSHVAKEILLRVLTLFQNIKNCLKIEGHLAVQPTFTEGSLFFLLHGEECAQKIRAL 265
LSLYDSHVAKEILLRVLTLFQNIKNCLKIEGHLAVQPTFTEGSLFFLLHGEECAQKIRAL
Sbjct: 206 LSLYDSHVAKEILLRVLTLFQNIKNCLKIEGHLAVQPTFTEGSLFFLLHGEECAQKIRAL 265
Query: 266 VDHHDAEVKEKVVTIIPKI 284
VDHHDAEVKEKVVTIIPKI
Sbjct: 266 VDHHDAEVKEKVVTIIPKI 284
>gi|169165931 PREDICTED: similar to SVH protein isoform 1 [Homo
sapiens]
Length = 284
Score = 407 bits (1047), Expect = e-114
Identities = 228/319 (71%), Positives = 237/319 (74%), Gaps = 70/319 (21%)
Query: 1 MGGPRGAGWVAAGLLLGAGACYCIYRLTRGRRRGDRELGIRSSKSAGALEEGTSEGQLCG 60
MGGPRGAGWVAAGLLLGAGACYCIYRLTRGRRRGDRELGIRSSKSA
Sbjct: 1 MGGPRGAGWVAAGLLLGAGACYCIYRLTRGRRRGDRELGIRSSKSA-------------- 46
Query: 61 RSARPQTGGTWESQWSKTSQPEDLTDGSYDDVLNAEQLQKLLYLLESTEDPVIIERALIT 120
EDLTDGSYDDVLNAEQLQKLLYLLESTEDPVIIERALIT
Sbjct: 47 ---------------------EDLTDGSYDDVLNAEQLQKLLYLLESTEDPVIIERALIT 85
Query: 121 LGNNAAFSVNQAIIRELGGIPIVANKINHSNQSIKEKALNALNNLSVNVENQIKIKVQV- 179
LGNNAAFSVNQAIIRELGGIPIVANKINHSNQSIK+KALNALNNLSVNVENQIKIK+ +
Sbjct: 86 LGNNAAFSVNQAIIRELGGIPIVANKINHSNQSIKDKALNALNNLSVNVENQIKIKIYIS 145
Query: 180 -------------------LKLLLNLSEN---------------PAMTEGLLRAQVDSSF 205
L+LL N++ + G +VDSSF
Sbjct: 146 QVCEDVFSGPLNSAVQLAGLRLLTNMTVTNDHQHMLHSYITDLFQVLLTGNGNTKVDSSF 205
Query: 206 LSLYDSHVAKEILLRVLTLFQNIKNCLKIEGHLAVQPTFTEGSLFFLLHGEECAQKIRAL 265
LSLYDSHVAKEILLRVLTLFQ+IKNCLKIEGHLAVQPTFTEGSLFFLLHGEECAQKIRAL
Sbjct: 206 LSLYDSHVAKEILLRVLTLFQHIKNCLKIEGHLAVQPTFTEGSLFFLLHGEECAQKIRAL 265
Query: 266 VDHHDAEVKEKVVTIIPKI 284
VDHHDAEVKEKVVTIIPKI
Sbjct: 266 VDHHDAEVKEKVVTIIPKI 284
>gi|113414573 PREDICTED: similar to SVH protein isoform 2 [Homo
sapiens]
Length = 284
Score = 407 bits (1047), Expect = e-114
Identities = 228/319 (71%), Positives = 237/319 (74%), Gaps = 70/319 (21%)
Query: 1 MGGPRGAGWVAAGLLLGAGACYCIYRLTRGRRRGDRELGIRSSKSAGALEEGTSEGQLCG 60
MGGPRGAGWVAAGLLLGAGACYCIYRLTRGRRRGDRELGIRSSKSA
Sbjct: 1 MGGPRGAGWVAAGLLLGAGACYCIYRLTRGRRRGDRELGIRSSKSA-------------- 46
Query: 61 RSARPQTGGTWESQWSKTSQPEDLTDGSYDDVLNAEQLQKLLYLLESTEDPVIIERALIT 120
EDLTDGSYDDVLNAEQLQKLLYLLESTEDPVIIERALIT
Sbjct: 47 ---------------------EDLTDGSYDDVLNAEQLQKLLYLLESTEDPVIIERALIT 85
Query: 121 LGNNAAFSVNQAIIRELGGIPIVANKINHSNQSIKEKALNALNNLSVNVENQIKIKVQV- 179
LGNNAAFSVNQAIIRELGGIPIVANKINHSNQSIK+KALNALNNLSVNVENQIKIK+ +
Sbjct: 86 LGNNAAFSVNQAIIRELGGIPIVANKINHSNQSIKDKALNALNNLSVNVENQIKIKIYIS 145
Query: 180 -------------------LKLLLNLSEN---------------PAMTEGLLRAQVDSSF 205
L+LL N++ + G +VDSSF
Sbjct: 146 QVCEDVFSGPLNSAVQLAGLRLLTNMTVTNDHQHMLHSYITDLFQVLLTGNGNTKVDSSF 205
Query: 206 LSLYDSHVAKEILLRVLTLFQNIKNCLKIEGHLAVQPTFTEGSLFFLLHGEECAQKIRAL 265
LSLYDSHVAKEILLRVLTLFQ+IKNCLKIEGHLAVQPTFTEGSLFFLLHGEECAQKIRAL
Sbjct: 206 LSLYDSHVAKEILLRVLTLFQHIKNCLKIEGHLAVQPTFTEGSLFFLLHGEECAQKIRAL 265
Query: 266 VDHHDAEVKEKVVTIIPKI 284
VDHHDAEVKEKVVTIIPKI
Sbjct: 266 VDHHDAEVKEKVVTIIPKI 284
>gi|29540566 armadillo repeat containing, X-linked 3 [Homo sapiens]
Length = 379
Score = 182 bits (463), Expect = 2e-46
Identities = 132/371 (35%), Positives = 182/371 (49%), Gaps = 89/371 (23%)
Query: 1 MGGPRGAGWVAAGLLLGAGACYCIYRLTRGRRRGDRELGIRSSKS-------AGALEEGT 53
MG R GWV AGL++GAGACYCIYRLTRGR++ ++ S +GA
Sbjct: 1 MGYARKVGWVTAGLVIGAGACYCIYRLTRGRKQNKEKMAEGGSGDVDDAGDCSGARYNDW 60
Query: 54 SE--------------------GQLCGRSARPQTGGTWESQWSKTSQPEDLTDGSYDDVL 93
S+ G G AR + + ++ + + + S D VL
Sbjct: 61 SDDDDDSNESKSIVWYPPWARIGTEAGTRARARARA--RATRARRAVQKRASPNSDDTVL 118
Query: 94 NAEQLQKLLYLLESTEDPVIIERALITLGNNAAFSVNQAIIRELGGIPIVANKINHSNQS 153
+ ++LQK+L L+E +E P I+E ALI LGNNAA++ N+ IIR+LGG+PIVA +N +
Sbjct: 119 SPQELQKVLCLVEMSEKPYILEAALIALGNNAAYAFNRDIIRDLGGLPIVAKILNTRDPI 178
Query: 154 IKEKAL-----------------------------------------NALNNLSVNVENQ 172
+KEKAL L N++V E Q
Sbjct: 179 VKEKALIVLNNLSVNAENQRRLKVYMNQVCDDTITSRLNSSVQLAGLRLLTNMTVTNEYQ 238
Query: 173 IKI------------------KVQVLKLLLNLSENPAMTEGLLRAQVDSSFLSLYDSHVA 214
+ K+QVLKLLLNL+ENPAMT LLRAQV SS SL++
Sbjct: 239 HMLANSISDFFRLFSAGNEETKLQVLKLLLNLAENPAMTRELLRAQVPSSLGSLFNKKEN 298
Query: 215 KEILLRVLTLFQNIKNCLKIEGHLAVQPTFTEGSLFFLL-HGEECAQKIRALVDHHDAEV 273
KE++L++L +F+NI + K E + Q F EGSLFF L + CA K+ + HHD V
Sbjct: 299 KEVILKLLVIFENINDNFKWEENEPTQNQFGEGSLFFFLKEFQVCADKVLGIESHHDFLV 358
Query: 274 KEKVVTIIPKI 284
K KV + K+
Sbjct: 359 KVKVGKFMAKL 369
>gi|29540564 armadillo repeat containing, X-linked 3 [Homo sapiens]
Length = 379
Score = 182 bits (463), Expect = 2e-46
Identities = 132/371 (35%), Positives = 182/371 (49%), Gaps = 89/371 (23%)
Query: 1 MGGPRGAGWVAAGLLLGAGACYCIYRLTRGRRRGDRELGIRSSKS-------AGALEEGT 53
MG R GWV AGL++GAGACYCIYRLTRGR++ ++ S +GA
Sbjct: 1 MGYARKVGWVTAGLVIGAGACYCIYRLTRGRKQNKEKMAEGGSGDVDDAGDCSGARYNDW 60
Query: 54 SE--------------------GQLCGRSARPQTGGTWESQWSKTSQPEDLTDGSYDDVL 93
S+ G G AR + + ++ + + + S D VL
Sbjct: 61 SDDDDDSNESKSIVWYPPWARIGTEAGTRARARARA--RATRARRAVQKRASPNSDDTVL 118
Query: 94 NAEQLQKLLYLLESTEDPVIIERALITLGNNAAFSVNQAIIRELGGIPIVANKINHSNQS 153
+ ++LQK+L L+E +E P I+E ALI LGNNAA++ N+ IIR+LGG+PIVA +N +
Sbjct: 119 SPQELQKVLCLVEMSEKPYILEAALIALGNNAAYAFNRDIIRDLGGLPIVAKILNTRDPI 178
Query: 154 IKEKAL-----------------------------------------NALNNLSVNVENQ 172
+KEKAL L N++V E Q
Sbjct: 179 VKEKALIVLNNLSVNAENQRRLKVYMNQVCDDTITSRLNSSVQLAGLRLLTNMTVTNEYQ 238
Query: 173 IKI------------------KVQVLKLLLNLSENPAMTEGLLRAQVDSSFLSLYDSHVA 214
+ K+QVLKLLLNL+ENPAMT LLRAQV SS SL++
Sbjct: 239 HMLANSISDFFRLFSAGNEETKLQVLKLLLNLAENPAMTRELLRAQVPSSLGSLFNKKEN 298
Query: 215 KEILLRVLTLFQNIKNCLKIEGHLAVQPTFTEGSLFFLL-HGEECAQKIRALVDHHDAEV 273
KE++L++L +F+NI + K E + Q F EGSLFF L + CA K+ + HHD V
Sbjct: 299 KEVILKLLVIFENINDNFKWEENEPTQNQFGEGSLFFFLKEFQVCADKVLGIESHHDFLV 358
Query: 274 KEKVVTIIPKI 284
K KV + K+
Sbjct: 359 KVKVGKFMAKL 369
>gi|7705274 armadillo repeat containing, X-linked 3 [Homo sapiens]
Length = 379
Score = 182 bits (463), Expect = 2e-46
Identities = 132/371 (35%), Positives = 182/371 (49%), Gaps = 89/371 (23%)
Query: 1 MGGPRGAGWVAAGLLLGAGACYCIYRLTRGRRRGDRELGIRSSKS-------AGALEEGT 53
MG R GWV AGL++GAGACYCIYRLTRGR++ ++ S +GA
Sbjct: 1 MGYARKVGWVTAGLVIGAGACYCIYRLTRGRKQNKEKMAEGGSGDVDDAGDCSGARYNDW 60
Query: 54 SE--------------------GQLCGRSARPQTGGTWESQWSKTSQPEDLTDGSYDDVL 93
S+ G G AR + + ++ + + + S D VL
Sbjct: 61 SDDDDDSNESKSIVWYPPWARIGTEAGTRARARARA--RATRARRAVQKRASPNSDDTVL 118
Query: 94 NAEQLQKLLYLLESTEDPVIIERALITLGNNAAFSVNQAIIRELGGIPIVANKINHSNQS 153
+ ++LQK+L L+E +E P I+E ALI LGNNAA++ N+ IIR+LGG+PIVA +N +
Sbjct: 119 SPQELQKVLCLVEMSEKPYILEAALIALGNNAAYAFNRDIIRDLGGLPIVAKILNTRDPI 178
Query: 154 IKEKAL-----------------------------------------NALNNLSVNVENQ 172
+KEKAL L N++V E Q
Sbjct: 179 VKEKALIVLNNLSVNAENQRRLKVYMNQVCDDTITSRLNSSVQLAGLRLLTNMTVTNEYQ 238
Query: 173 IKI------------------KVQVLKLLLNLSENPAMTEGLLRAQVDSSFLSLYDSHVA 214
+ K+QVLKLLLNL+ENPAMT LLRAQV SS SL++
Sbjct: 239 HMLANSISDFFRLFSAGNEETKLQVLKLLLNLAENPAMTRELLRAQVPSSLGSLFNKKEN 298
Query: 215 KEILLRVLTLFQNIKNCLKIEGHLAVQPTFTEGSLFFLL-HGEECAQKIRALVDHHDAEV 273
KE++L++L +F+NI + K E + Q F EGSLFF L + CA K+ + HHD V
Sbjct: 299 KEVILKLLVIFENINDNFKWEENEPTQNQFGEGSLFFFLKEFQVCADKVLGIESHHDFLV 358
Query: 274 KEKVVTIIPKI 284
K KV + K+
Sbjct: 359 KVKVGKFMAKL 369
>gi|7706143 armadillo repeat containing, X-linked 1 [Homo sapiens]
Length = 453
Score = 169 bits (429), Expect = 2e-42
Identities = 116/305 (38%), Positives = 157/305 (51%), Gaps = 68/305 (22%)
Query: 41 RSSKSAGALEEGTSEGQLCGRSAR-PQTGGTWESQWSKTSQPEDLTDGSYDDVLNAEQLQ 99
RS AG G S+G+ +S R P T TW + K + P + DD+L+A LQ
Sbjct: 156 RSGSRAGGRASGKSKGKARSKSTRAPAT--TWPVRRGKFNFPYKI-----DDILSAPDLQ 208
Query: 100 KLLYLLESTEDPVIIERALITLGNNAAFSVNQAIIRELGGIPIVANKINHSNQSIKEKAL 159
K+L +LE T DP I E AL+TLGNNAA+S NQ IRELGG+PI+A I + I+EK
Sbjct: 209 KVLNILERTNDPFIQEVALVTLGNNAAYSFNQNAIRELGGVPIIAKLIKTKDPIIREKTY 268
Query: 160 NALNNLSVNVENQIKIKVQV--------------------LKLLLNL------------- 186
NALNNLSVN ENQ KIK + L+LL N+
Sbjct: 269 NALNNLSVNAENQGKIKTYISQVCDDTMVCRLDSAVQMAGLRLLTNMTVTNHYQHLLSYS 328
Query: 187 --------------------------SENPAMTEGLLRAQVDSSFLSLYDSHVAKEILLR 220
+ENPAMT L+ +V S +SL++ +EILL
Sbjct: 329 FPDFFALLFLGNHFTKIQIMKLIINFTENPAMTRELVSCKVPSELISLFNKEWDREILLN 388
Query: 221 VLTLFQNIKNCLKIEGHLAVQPTFTEGSLFFLL-HGEECAQKIRALVDHHDAEVKEKVVT 279
+LTLF+NI + +K EG + + F+ SLFFL C +KI+AL +H+D VK KV+
Sbjct: 389 ILTLFENINDNIKNEGLASSRKEFSRSSLFFLFKESGVCVKKIKALANHNDLVVKVKVLK 448
Query: 280 IIPKI 284
++ K+
Sbjct: 449 VLTKL 453
Score = 50.1 bits (118), Expect = 2e-06
Identities = 30/75 (40%), Positives = 40/75 (53%), Gaps = 20/75 (26%)
Query: 1 MGGPRGAGWVAAGLLLGAGACYCIYRLTRGRRRGDR------------ELGIRSSKSA-- 46
MG R AG VAAG+++GAGACYC+YRL GR ++ E+G+ + K A
Sbjct: 1 MGRTREAGCVAAGVVIGAGACYCVYRLAWGRDENEKIWDEDEESTDTSEIGVETVKGAKT 60
Query: 47 ------GALEEGTSE 55
GA +G SE
Sbjct: 61 NAGAGSGAKLQGDSE 75
>gi|7662162 ALEX2 protein [Homo sapiens]
Length = 632
Score = 110 bits (276), Expect = 1e-24
Identities = 94/324 (29%), Positives = 145/324 (44%), Gaps = 79/324 (24%)
Query: 38 LGIRSSKSAGALEEGTSEGQLCGRSARPQTGGTWESQWSKT-----SQPEDLTDG----- 87
+G R A A ++ G + P + ES W+ T S+PE G
Sbjct: 309 MGFRPGDGAAAAAAASANGGQAFLAEVPDSE-EGESGWTDTESDSDSEPETQRRGRGRRP 367
Query: 88 ----------SYDDVLNAEQLQKLLYLLESTEDPVIIERALITLGNNAAFSVNQAIIREL 137
D++L L+K+L LL+ ++DP I + AL+TL NNA +S NQ IR+L
Sbjct: 368 VAMQKRPFPYEIDEILGVRDLRKVLALLQKSDDPFIQQVALLTLSNNANYSCNQETIRKL 427
Query: 138 GGIPIVANKINHSNQSIKEKALNALNNLSVNVENQIKIKVQVLKLL-------LNLSENP 190
GG+PI+AN IN ++ IKEKAL A+NNLS N ENQ +++V + K++ LN +
Sbjct: 428 GGLPIIANMINKTDPHIKEKALMAMNNLSENYENQGRLQVYMNKVMDDIMASNLNSAVQV 487
Query: 191 AMTEGLLRAQVDSSFLSLYDSHVA-------------KEILLRVLTLFQNIKNCLK---- 233
+ L + + + L + +A K +L++L+ F + LK
Sbjct: 488 VGLKFLTNMTITNDYQHLLVNSIANFFRLLSQGGGKIKVEILKILSNFAENPDMLKKLLS 547
Query: 234 --------------IEGHLAVQP-------------------TFTEGSLFFL-LHGEECA 259
+E + + F +GSLF+L C
Sbjct: 548 TQVPASFSSLYNSYVESEILINALTLFEIIYDNLRAEVFNYREFNKGSLFYLCTTSGVCV 607
Query: 260 QKIRALVDHHDAEVKEKVVTIIPK 283
+KIRAL +HHD VK KV+ ++ K
Sbjct: 608 KKIRALANHHDLLVKVKVIKLVNK 631
Score = 43.9 bits (102), Expect = 2e-04
Identities = 19/31 (61%), Positives = 24/31 (77%)
Query: 1 MGGPRGAGWVAAGLLLGAGACYCIYRLTRGR 31
M R AG VAAG+++GAGA YC+Y+ TRGR
Sbjct: 1 MSRVRDAGCVAAGIVIGAGAWYCVYKYTRGR 31
>gi|29540562 ALEX2 protein [Homo sapiens]
Length = 632
Score = 110 bits (276), Expect = 1e-24
Identities = 94/324 (29%), Positives = 145/324 (44%), Gaps = 79/324 (24%)
Query: 38 LGIRSSKSAGALEEGTSEGQLCGRSARPQTGGTWESQWSKT-----SQPEDLTDG----- 87
+G R A A ++ G + P + ES W+ T S+PE G
Sbjct: 309 MGFRPGDGAAAAAAASANGGQAFLAEVPDSE-EGESGWTDTESDSDSEPETQRRGRGRRP 367
Query: 88 ----------SYDDVLNAEQLQKLLYLLESTEDPVIIERALITLGNNAAFSVNQAIIREL 137
D++L L+K+L LL+ ++DP I + AL+TL NNA +S NQ IR+L
Sbjct: 368 VAMQKRPFPYEIDEILGVRDLRKVLALLQKSDDPFIQQVALLTLSNNANYSCNQETIRKL 427
Query: 138 GGIPIVANKINHSNQSIKEKALNALNNLSVNVENQIKIKVQVLKLL-------LNLSENP 190
GG+PI+AN IN ++ IKEKAL A+NNLS N ENQ +++V + K++ LN +
Sbjct: 428 GGLPIIANMINKTDPHIKEKALMAMNNLSENYENQGRLQVYMNKVMDDIMASNLNSAVQV 487
Query: 191 AMTEGLLRAQVDSSFLSLYDSHVA-------------KEILLRVLTLFQNIKNCLK---- 233
+ L + + + L + +A K +L++L+ F + LK
Sbjct: 488 VGLKFLTNMTITNDYQHLLVNSIANFFRLLSQGGGKIKVEILKILSNFAENPDMLKKLLS 547
Query: 234 --------------IEGHLAVQP-------------------TFTEGSLFFL-LHGEECA 259
+E + + F +GSLF+L C
Sbjct: 548 TQVPASFSSLYNSYVESEILINALTLFEIIYDNLRAEVFNYREFNKGSLFYLCTTSGVCV 607
Query: 260 QKIRALVDHHDAEVKEKVVTIIPK 283
+KIRAL +HHD VK KV+ ++ K
Sbjct: 608 KKIRALANHHDLLVKVKVIKLVNK 631
Score = 43.9 bits (102), Expect = 2e-04
Identities = 19/31 (61%), Positives = 24/31 (77%)
Query: 1 MGGPRGAGWVAAGLLLGAGACYCIYRLTRGR 31
M R AG VAAG+++GAGA YC+Y+ TRGR
Sbjct: 1 MSRVRDAGCVAAGIVIGAGAWYCVYKYTRGR 31
>gi|239757861 PREDICTED: similar to armadillo repeat containing,
X-linked 4 [Homo sapiens]
Length = 2382
Score = 96.7 bits (239), Expect = 2e-20
Identities = 70/253 (27%), Positives = 119/253 (47%), Gaps = 61/253 (24%)
Query: 93 LNAEQLQKLLYLLESTEDPVIIERALITLGNNAAFSVNQAIIRELGGIPIVANKINHSNQ 152
++ L+KL+ ++E TEDP + E A L N+A +S + ++R +GGI ++ + +N+
Sbjct: 2130 MDPRDLEKLICMIEMTEDPSVHEIANNALYNSADYSYSHEVVRNVGGISVIESLLNNPYP 2189
Query: 153 SIKEKA-----------------------------------------LNALNNLSVNVEN 171
S+++KA L + +L++ E
Sbjct: 2190 SVRQKALNALNNISVAAENHRKVKTYLNQVCEDTVTYPLNSNVQLAGLRLIRHLTITSEY 2249
Query: 172 QIKI------------------KVQVLKLLLNLSENPAMTEGLLRAQVDSSFLSLYDSHV 213
Q + K VL +LLN S+NP+MT+ LL A +S ++++
Sbjct: 2250 QHMVTNYISEFLRLLTVGSGETKDHVLGMLLNFSKNPSMTKDLLIANAPTSLINIFSKKE 2309
Query: 214 AKEILLRVLTLFQNIKNCLKIEGHLAVQPTFTEGSLFFLL-HGEECAQKIRAL-VDHHDA 271
KE +L L+LF+NI K Q F++ SL+FL + CA+K+RAL + +D
Sbjct: 2310 TKENILNALSLFENINYHFKRRAKAFTQDKFSKNSLYFLFQRPKACAKKLRALAAECNDP 2369
Query: 272 EVKEKVVTIIPKI 284
EVKE+V +I K+
Sbjct: 2370 EVKERVELLISKL 2382
Score = 43.9 bits (102), Expect = 2e-04
Identities = 20/43 (46%), Positives = 26/43 (60%)
Query: 1 MGGPRGAGWVAAGLLLGAGACYCIYRLTRGRRRGDRELGIRSS 43
MG + GWV AGL++ AG CY IY+ T+GR + R L S
Sbjct: 93 MGRIQEVGWVTAGLVIWAGTCYYIYKFTKGRAQSVRTLARNGS 135
>gi|41054846 armadillo repeat containing, X-linked 5 [Homo sapiens]
Length = 558
Score = 77.0 bits (188), Expect = 2e-14
Identities = 61/252 (24%), Positives = 111/252 (44%), Gaps = 60/252 (23%)
Query: 93 LNAEQLQKLLYLLESTEDPVIIERALITLGNNAAFSVNQAIIRELGGIPIVANKINHSN- 151
L ++ KL+ LL+ T+DP I E A + +G + A+ Q II ++G ++ N +N+ N
Sbjct: 307 LEPKEFDKLVALLKLTKDPFIHEIATMIMGISPAYPFTQDIIHDVGITVMIENLVNNPNV 366
Query: 152 ----------------------------------------QSIKEKALNALNNLSVNVEN 171
++ L L +LS+ E+
Sbjct: 367 KEHPGALSMVDDSSESSEEPKSGESYIHQVCKGIISCPLNSPVQLAGLKLLGHLSIKFED 426
Query: 172 Q------------------IKIKVQVLKLLLNLSENPAMTEGLLRAQVDSSFLSLYDSHV 213
+K K VLK+ LS+N A T L+ A+V SS ++ ++ +
Sbjct: 427 HYVITSYIPDFLTLLNKGSVKTKFYVLKVFSCLSKNHANTRELISAKVLSSLVAPFNKNE 486
Query: 214 AKEILLRVLTLFQNIKNCLKIEGHLAVQPTFTEGSLFFLL-HGEECAQKIRALVDHHDAE 272
+K +L ++ +F+NI K + L + FT+ L + ++ QK++ L +H D E
Sbjct: 487 SKANILNIIEIFENINFQFKTKAKLFTKEKFTKSELISIFQEAKQFGQKLQDLAEHSDPE 546
Query: 273 VKEKVVTIIPKI 284
V++KV+ +I K+
Sbjct: 547 VRDKVIRLILKL 558
>gi|34147335 armadillo repeat containing, X-linked 6 [Homo sapiens]
Length = 300
Score = 66.6 bits (161), Expect = 2e-11
Identities = 78/302 (25%), Positives = 112/302 (37%), Gaps = 90/302 (29%)
Query: 1 MGGPRGAGWVAAGLLLGAGACYCIYRLTRGRRRGDR--ELGIRSSKSAGALEE------- 51
MG R GW+AAGL++GAGACYC+Y+LT GR ++ E G L+E
Sbjct: 1 MGRAREVGWMAAGLMIGAGACYCVYKLTIGRDDSEKLEEEGEEEWDDDQELDEEEPDIWF 60
Query: 52 --------------GTSEGQLCGRSARPQTGG-------------------TWESQWSKT 78
T G G RP GG TW +Q K
Sbjct: 61 DFETMARPWTEDGDWTEPGAPGGTEDRPSGGGKANRAHPIKQRPFPYEHKNTWSAQNCKN 120
Query: 79 -------------------SQPEDLTDGSYDDVLNAEQLQKLLYLLESTEDPVIIERALI 119
++P+D D+ + + T DP + E
Sbjct: 121 GSCVLDLSKCLFIQGKLLFAEPKDAGFPFSQDINSHLASLSMARNTSPTPDPTVREALCA 180
Query: 120 TLGNNAAFSVNQAIIRELGGIPIVANKINHS------NQSIKEKALNAL------NNLSV 167
NA+ I G I + N++ N +++ LN L NN+
Sbjct: 181 PDNLNAS-------IESQGQIKMYINEVCRETVSRCCNSFLQQAGLNLLISMTVINNMLA 233
Query: 168 NVENQIKI----------KVQVLKLLLNLSENPAMTEGLLRAQVDSSFLSLYDSHVAKEI 217
+ +K KVQVLK L+ LSE P + L+ AQ+ SF+SL+ + +EI
Sbjct: 234 KSASDLKFPLISEGSGCAKVQVLKPLMGLSEKPVLAGELVGAQMLFSFMSLFIRNGNREI 293
Query: 218 LL 219
LL
Sbjct: 294 LL 295
>gi|57546906 armadillo repeat containing, X-linked 6 [Homo sapiens]
Length = 300
Score = 66.6 bits (161), Expect = 2e-11
Identities = 78/302 (25%), Positives = 112/302 (37%), Gaps = 90/302 (29%)
Query: 1 MGGPRGAGWVAAGLLLGAGACYCIYRLTRGRRRGDR--ELGIRSSKSAGALEE------- 51
MG R GW+AAGL++GAGACYC+Y+LT GR ++ E G L+E
Sbjct: 1 MGRAREVGWMAAGLMIGAGACYCVYKLTIGRDDSEKLEEEGEEEWDDDQELDEEEPDIWF 60
Query: 52 --------------GTSEGQLCGRSARPQTGG-------------------TWESQWSKT 78
T G G RP GG TW +Q K
Sbjct: 61 DFETMARPWTEDGDWTEPGAPGGTEDRPSGGGKANRAHPIKQRPFPYEHKNTWSAQNCKN 120
Query: 79 -------------------SQPEDLTDGSYDDVLNAEQLQKLLYLLESTEDPVIIERALI 119
++P+D D+ + + T DP + E
Sbjct: 121 GSCVLDLSKCLFIQGKLLFAEPKDAGFPFSQDINSHLASLSMARNTSPTPDPTVREALCA 180
Query: 120 TLGNNAAFSVNQAIIRELGGIPIVANKINHS------NQSIKEKALNAL------NNLSV 167
NA+ I G I + N++ N +++ LN L NN+
Sbjct: 181 PDNLNAS-------IESQGQIKMYINEVCRETVSRCCNSFLQQAGLNLLISMTVINNMLA 233
Query: 168 NVENQIKI----------KVQVLKLLLNLSENPAMTEGLLRAQVDSSFLSLYDSHVAKEI 217
+ +K KVQVLK L+ LSE P + L+ AQ+ SF+SL+ + +EI
Sbjct: 234 KSASDLKFPLISEGSGCAKVQVLKPLMGLSEKPVLAGELVGAQMLFSFMSLFIRNGNREI 293
Query: 218 LL 219
LL
Sbjct: 294 LL 295
>gi|51702248 G protein-coupled receptor associated sorting protein 2
[Homo sapiens]
Length = 838
Score = 59.7 bits (143), Expect = 3e-09
Identities = 56/250 (22%), Positives = 107/250 (42%), Gaps = 71/250 (28%)
Query: 93 LNAEQLQKLLYLLESTEDPVIIERALITLGNNAAFSVNQAIIRELGGIPIVANKIN---- 148
+ +E+ ++ L L++ DP I E + I +G +A + IR+ G + ++ +N
Sbjct: 593 IGSEEFEEFLLLMDKIRDPFIHEISKIAMGMRSASQFTRDFIRDSGVVSLIETLLNYPSS 652
Query: 149 ------------------------------------HSNQSIKE-KALNALNNLSVNVEN 171
HS S+++ + L +L++ ++
Sbjct: 653 RVRTSFLENMIHMAPPYPNLNMIETFICQVCEETLAHSVDSLEQLTGIRMLRHLTMTIDY 712
Query: 172 QIKI------------------KVQVLKLLLNLSENPAMTEGLLRAQVDSSFLSLYDSHV 213
I K VLK+LLNLSENPA+ + L A+ S F+ L++
Sbjct: 713 HTLIANYMSGFLSLLTTANARTKFHVLKMLLNLSENPAVAKKLFSAKALSIFVGLFNIEE 772
Query: 214 AKEILLRVLTLFQNIKNCLK------IEGHLAVQPTFTEGSLFFLLHGEECAQKIRALVD 267
+ + V+ +FQNI N +K I+ +++P + F EE A++++A +D
Sbjct: 773 TNDNIQIVIKMFQNISNIIKSGKMSLIDDDFSLEPLISAFREF-----EELAKQLQAQID 827
Query: 268 H-HDAEVKEK 276
+ +D EV ++
Sbjct: 828 NQNDPEVGQQ 837
>gi|19923967 G protein-coupled receptor associated sorting protein 2
[Homo sapiens]
Length = 838
Score = 59.7 bits (143), Expect = 3e-09
Identities = 56/250 (22%), Positives = 107/250 (42%), Gaps = 71/250 (28%)
Query: 93 LNAEQLQKLLYLLESTEDPVIIERALITLGNNAAFSVNQAIIRELGGIPIVANKIN---- 148
+ +E+ ++ L L++ DP I E + I +G +A + IR+ G + ++ +N
Sbjct: 593 IGSEEFEEFLLLMDKIRDPFIHEISKIAMGMRSASQFTRDFIRDSGVVSLIETLLNYPSS 652
Query: 149 ------------------------------------HSNQSIKE-KALNALNNLSVNVEN 171
HS S+++ + L +L++ ++
Sbjct: 653 RVRTSFLENMIHMAPPYPNLNMIETFICQVCEETLAHSVDSLEQLTGIRMLRHLTMTIDY 712
Query: 172 QIKI------------------KVQVLKLLLNLSENPAMTEGLLRAQVDSSFLSLYDSHV 213
I K VLK+LLNLSENPA+ + L A+ S F+ L++
Sbjct: 713 HTLIANYMSGFLSLLTTANARTKFHVLKMLLNLSENPAVAKKLFSAKALSIFVGLFNIEE 772
Query: 214 AKEILLRVLTLFQNIKNCLK------IEGHLAVQPTFTEGSLFFLLHGEECAQKIRALVD 267
+ + V+ +FQNI N +K I+ +++P + F EE A++++A +D
Sbjct: 773 TNDNIQIVIKMFQNISNIIKSGKMSLIDDDFSLEPLISAFREF-----EELAKQLQAQID 827
Query: 268 H-HDAEVKEK 276
+ +D EV ++
Sbjct: 828 NQNDPEVGQQ 837
>gi|150378528 G protein-coupled receptor associated sorting protein 1
[Homo sapiens]
Length = 1395
Score = 51.6 bits (122), Expect = 8e-07
Identities = 29/71 (40%), Positives = 42/71 (59%)
Query: 165 LSVNVENQIKIKVQVLKLLLNLSENPAMTEGLLRAQVDSSFLSLYDSHVAKEILLRVLTL 224
LS+ K + VLK+LLNLSEN MT+ LL A+ S F+ L++ + + VL +
Sbjct: 1282 LSLLATGNAKTRFHVLKMLLNLSENLFMTKELLSAEAVSEFIGLFNREETNDNIQIVLAI 1341
Query: 225 FQNIKNCLKIE 235
F+NI N +K E
Sbjct: 1342 FENIGNNIKKE 1352
Score = 41.2 bits (95), Expect = 0.001
Identities = 36/157 (22%), Positives = 69/157 (43%), Gaps = 21/157 (13%)
Query: 93 LNAEQLQKLLYLLESTEDPVIIERALITLGNNAAFSVNQAIIRELGGIPIVANKINHSNQ 152
+ +E+ ++LL L+E DP I E + I +G +A + IR+ G + ++ +N+ +
Sbjct: 1151 IGSEEFEELLLLMEKIRDPFIHEISKIAMGMRSASQFTRDFIRDSGVVSLIETLLNYPSS 1210
Query: 153 SIKEKALNALNNLSVNVENQIKIKVQVLKL----LLNLSENPAMTEGL------------ 196
++ L + ++ N I+ + K+ L ++P G+
Sbjct: 1211 RVRTSFLENMIRMAPPYPNLNIIQTYICKVCEETLAYSVDSPEQLSGIRMIRHLTTTTDY 1270
Query: 197 --LRAQVDSSFLSLYDSHVAK---EILLRVLTLFQNI 228
L A S FLSL + AK +L +L L +N+
Sbjct: 1271 HTLVANYMSGFLSLLATGNAKTRFHVLKMLLNLSENL 1307
>gi|150378489 G protein-coupled receptor associated sorting protein 1
[Homo sapiens]
Length = 1395
Score = 51.6 bits (122), Expect = 8e-07
Identities = 29/71 (40%), Positives = 42/71 (59%)
Query: 165 LSVNVENQIKIKVQVLKLLLNLSENPAMTEGLLRAQVDSSFLSLYDSHVAKEILLRVLTL 224
LS+ K + VLK+LLNLSEN MT+ LL A+ S F+ L++ + + VL +
Sbjct: 1282 LSLLATGNAKTRFHVLKMLLNLSENLFMTKELLSAEAVSEFIGLFNREETNDNIQIVLAI 1341
Query: 225 FQNIKNCLKIE 235
F+NI N +K E
Sbjct: 1342 FENIGNNIKKE 1352
Score = 41.2 bits (95), Expect = 0.001
Identities = 36/157 (22%), Positives = 69/157 (43%), Gaps = 21/157 (13%)
Query: 93 LNAEQLQKLLYLLESTEDPVIIERALITLGNNAAFSVNQAIIRELGGIPIVANKINHSNQ 152
+ +E+ ++LL L+E DP I E + I +G +A + IR+ G + ++ +N+ +
Sbjct: 1151 IGSEEFEELLLLMEKIRDPFIHEISKIAMGMRSASQFTRDFIRDSGVVSLIETLLNYPSS 1210
Query: 153 SIKEKALNALNNLSVNVENQIKIKVQVLKL----LLNLSENPAMTEGL------------ 196
++ L + ++ N I+ + K+ L ++P G+
Sbjct: 1211 RVRTSFLENMIRMAPPYPNLNIIQTYICKVCEETLAYSVDSPEQLSGIRMIRHLTTTTDY 1270
Query: 197 --LRAQVDSSFLSLYDSHVAK---EILLRVLTLFQNI 228
L A S FLSL + AK +L +L L +N+
Sbjct: 1271 HTLVANYMSGFLSLLATGNAKTRFHVLKMLLNLSENL 1307
>gi|103472136 G protein-coupled receptor associated sorting protein 1
[Homo sapiens]
Length = 1395
Score = 51.6 bits (122), Expect = 8e-07
Identities = 29/71 (40%), Positives = 42/71 (59%)
Query: 165 LSVNVENQIKIKVQVLKLLLNLSENPAMTEGLLRAQVDSSFLSLYDSHVAKEILLRVLTL 224
LS+ K + VLK+LLNLSEN MT+ LL A+ S F+ L++ + + VL +
Sbjct: 1282 LSLLATGNAKTRFHVLKMLLNLSENLFMTKELLSAEAVSEFIGLFNREETNDNIQIVLAI 1341
Query: 225 FQNIKNCLKIE 235
F+NI N +K E
Sbjct: 1342 FENIGNNIKKE 1352
Score = 41.2 bits (95), Expect = 0.001
Identities = 36/157 (22%), Positives = 69/157 (43%), Gaps = 21/157 (13%)
Query: 93 LNAEQLQKLLYLLESTEDPVIIERALITLGNNAAFSVNQAIIRELGGIPIVANKINHSNQ 152
+ +E+ ++LL L+E DP I E + I +G +A + IR+ G + ++ +N+ +
Sbjct: 1151 IGSEEFEELLLLMEKIRDPFIHEISKIAMGMRSASQFTRDFIRDSGVVSLIETLLNYPSS 1210
Query: 153 SIKEKALNALNNLSVNVENQIKIKVQVLKL----LLNLSENPAMTEGL------------ 196
++ L + ++ N I+ + K+ L ++P G+
Sbjct: 1211 RVRTSFLENMIRMAPPYPNLNIIQTYICKVCEETLAYSVDSPEQLSGIRMIRHLTTTTDY 1270
Query: 197 --LRAQVDSSFLSLYDSHVAK---EILLRVLTLFQNI 228
L A S FLSL + AK +L +L L +N+
Sbjct: 1271 HTLVANYMSGFLSLLATGNAKTRFHVLKMLLNLSENL 1307
>gi|216547715 basic helix-loop-helix domain containing, class B, 9
[Homo sapiens]
Length = 547
Score = 44.7 bits (104), Expect = 9e-05
Identities = 28/103 (27%), Positives = 56/103 (54%), Gaps = 1/103 (0%)
Query: 93 LNAEQLQKLLYLLESTEDPVIIERALITLGNNAAFSVNQAIIRELGGIPIVANKINHSNQ 152
+++E+ +KL+ LL+ST DP+I + A I +G + Q I E+G + ++ + ++ +
Sbjct: 320 MDSEEFEKLVSLLKSTTDPLIHKIARIAMGVHNVHPFAQEFINEVGVVTLIESLLSFPSP 379
Query: 153 SIKEKALNALNNLSVNVENQIKIKVQVLKLLLNLSENPAMTEG 195
+++K + LN S + E Q KI++ V + P + G
Sbjct: 380 EMRKKTVITLNPPSGD-ERQRKIELHVKHMCKETMSFPLNSPG 421
Score = 36.6 bits (83), Expect = 0.026
Identities = 19/60 (31%), Positives = 34/60 (56%)
Query: 174 KIKVQVLKLLLNLSENPAMTEGLLRAQVDSSFLSLYDSHVAKEILLRVLTLFQNIKNCLK 233
K + VLKLLLN+SENP ++ + ++ +++ AK L+ + +F NIK ++
Sbjct: 459 KTRNLVLKLLLNMSENPTAARDMINMKALAALKLIFNQKEAKANLVSGVAIFINIKEHIR 518
>gi|216547682 basic helix-loop-helix domain containing, class B, 9
[Homo sapiens]
Length = 547
Score = 44.7 bits (104), Expect = 9e-05
Identities = 28/103 (27%), Positives = 56/103 (54%), Gaps = 1/103 (0%)
Query: 93 LNAEQLQKLLYLLESTEDPVIIERALITLGNNAAFSVNQAIIRELGGIPIVANKINHSNQ 152
+++E+ +KL+ LL+ST DP+I + A I +G + Q I E+G + ++ + ++ +
Sbjct: 320 MDSEEFEKLVSLLKSTTDPLIHKIARIAMGVHNVHPFAQEFINEVGVVTLIESLLSFPSP 379
Query: 153 SIKEKALNALNNLSVNVENQIKIKVQVLKLLLNLSENPAMTEG 195
+++K + LN S + E Q KI++ V + P + G
Sbjct: 380 EMRKKTVITLNPPSGD-ERQRKIELHVKHMCKETMSFPLNSPG 421
Score = 36.6 bits (83), Expect = 0.026
Identities = 19/60 (31%), Positives = 34/60 (56%)
Query: 174 KIKVQVLKLLLNLSENPAMTEGLLRAQVDSSFLSLYDSHVAKEILLRVLTLFQNIKNCLK 233
K + VLKLLLN+SENP ++ + ++ +++ AK L+ + +F NIK ++
Sbjct: 459 KTRNLVLKLLLNMSENPTAARDMINMKALAALKLIFNQKEAKANLVSGVAIFINIKEHIR 518
>gi|216547672 basic helix-loop-helix domain containing, class B, 9
[Homo sapiens]
Length = 547
Score = 44.7 bits (104), Expect = 9e-05
Identities = 28/103 (27%), Positives = 56/103 (54%), Gaps = 1/103 (0%)
Query: 93 LNAEQLQKLLYLLESTEDPVIIERALITLGNNAAFSVNQAIIRELGGIPIVANKINHSNQ 152
+++E+ +KL+ LL+ST DP+I + A I +G + Q I E+G + ++ + ++ +
Sbjct: 320 MDSEEFEKLVSLLKSTTDPLIHKIARIAMGVHNVHPFAQEFINEVGVVTLIESLLSFPSP 379
Query: 153 SIKEKALNALNNLSVNVENQIKIKVQVLKLLLNLSENPAMTEG 195
+++K + LN S + E Q KI++ V + P + G
Sbjct: 380 EMRKKTVITLNPPSGD-ERQRKIELHVKHMCKETMSFPLNSPG 421
Score = 36.6 bits (83), Expect = 0.026
Identities = 19/60 (31%), Positives = 34/60 (56%)
Query: 174 KIKVQVLKLLLNLSENPAMTEGLLRAQVDSSFLSLYDSHVAKEILLRVLTLFQNIKNCLK 233
K + VLKLLLN+SENP ++ + ++ +++ AK L+ + +F NIK ++
Sbjct: 459 KTRNLVLKLLLNMSENPTAARDMINMKALAALKLIFNQKEAKANLVSGVAIFINIKEHIR 518
Database: hs.faa
Posted date: Aug 4, 2009 4:42 PM
Number of letters in database: 18,247,518
Number of sequences in database: 37,866
Lambda K H
0.317 0.134 0.382
Gapped
Lambda K H
0.267 0.0410 0.140
Matrix: BLOSUM62
Gap Penalties: Existence: 11, Extension: 1
Number of Hits to DB: 10,018,484
Number of Sequences: 37866
Number of extensions: 409299
Number of successful extensions: 1505
Number of sequences better than 10.0: 30
Number of HSP's better than 10.0 without gapping: 59
Number of HSP's successfully gapped in prelim test: 25
Number of HSP's that attempted gapping in prelim test: 1363
Number of HSP's gapped (non-prelim): 148
length of query: 284
length of database: 18,247,518
effective HSP length: 101
effective length of query: 183
effective length of database: 14,423,052
effective search space: 2639418516
effective search space used: 2639418516
T: 11
A: 40
X1: 16 ( 7.3 bits)
X2: 38 (14.6 bits)
X3: 64 (24.7 bits)
S1: 41 (21.6 bits)
S2: 61 (28.1 bits)
Search results were obtained with NCBI BLAST and RefSeq entries.
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Guide to the Human Genome
Copyright © 2010 by Stewart Scherer. All rights reserved.