Guide to the Human Genome
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Name: IGF2BP1 Sequence: fasta or formatted (438aa) NCBI GI: 238624257
Description:

insulin-like growth factor 2 mRNA binding protein 1 isoform 2

Referenced in:

hnRNP

Other entries for this name:
alt prot [577aa] insulin-like growth factor 2 mRNA binding protein 1 isoform 1
Composition:

amino acid map
 Amino acid        Percentage    Count  Longest homopolymer
 A alanine             8.9         39           2
 C cysteine            0.9          4           2
 D aspartate           3.0         13           1
 E glutamate           8.2         36           2
 F phenylalanine       3.0         13           2
 G glycine             5.9         26           2
 H histidine           2.1          9           1
 I isoleucine          7.1         31           2
 K lysine              8.0         35           2
 L leucine             6.4         28           2
 M methionine          1.8          8           1
 N asparagine          4.6         20           2
 P proline             5.7         25           4
 Q glutamine           7.5         33           2
 R arginine            5.0         22           2
 S serine              6.4         28           3
 T threonine           4.6         20           1
 V valine              8.2         36           3
 W tryptophan          0.5          2           1
 Y tyrosine            2.3         10           1
Comparative genomics:

Search single species RefSeq proteins at NCBI
   H. sapiens
   M. musculus
   D. rerio
   C. intestinalis
   S. purpuratus
   D. melanogaster
   C. elegans
   A. thaliana
   S. cerevisiae
   E. coli W3110
   A. pernix K1

Search summary

comparative genomics plot

   Figure data

Additional searches of
RefSeq proteins at NCBI

   All
   Eukaryotes
   Bacteria
   Archaea
   Viruses
   Primates
   Mammals
   Vertebrates

Related human proteins:
Protein          Relative score         Description

Self-match            1.000   insulin-like growth factor 2 mRNA binding protein 1... 
IGF2BP1               0.689   insulin-like growth factor 2 mRNA binding protein 1 ...
IGF2BP3               0.519   insulin-like growth factor 2 mRNA binding protein 3 ...
IGF2BP2               0.488   insulin-like growth factor 2 mRNA binding protein 2 ...
IGF2BP2               0.449   insulin-like growth factor 2 mRNA binding protein 2 ...
PCBP3                 0.056   poly(rC) binding protein 3 isoform 2 
PCBP3                 0.056   poly(rC) binding protein 3 isoform 1 
PCBP1                 0.055   poly(rC) binding protein 1 
PCBP2                 0.054   poly(rC) binding protein 2 isoform g 
PCBP2                 0.054   poly(rC) binding protein 2 isoform f 
PCBP2                 0.054   poly(rC) binding protein 2 isoform e 
PCBP2                 0.054   poly(rC) binding protein 2 isoform d 
PCBP2                 0.054   poly(rC) binding protein 2 isoform b 
PCBP2                 0.054   poly(rC) binding protein 2 isoform a 
PCBP2                 0.054   poly(rC) binding protein 2 isoform c 
KHSRP                 0.053   KH-type splicing regulatory protein 
NOVA1                 0.053   neuro-oncological ventral antigen 1 isoform 1 
FUBP3                 0.050   far upstream element (FUSE) binding protein 3 [Homo...
PCBP4                 0.048   poly(rC) binding protein 4 isoform c 
PCBP4                 0.048   poly(rC) binding protein 4 isoform c 
FUBP1                 0.047   far upstream element-binding protein 
NOVA1                 0.043   neuro-oncological ventral antigen 1 isoform 2 
NOVA2                 0.041   neuro-oncological ventral antigen 2 
HNRNPK                0.041   heterogeneous nuclear ribonucleoprotein K isoform a ...
HNRNPK                0.041   heterogeneous nuclear ribonucleoprotein K isoform b ...
HNRNPK                0.041   heterogeneous nuclear ribonucleoprotein K isoform a ...
TDRKH                 0.041   tudor and KH domain containing isoform a 
TDRKH                 0.041   tudor and KH domain containing isoform a 
TDRKH                 0.041   tudor and KH domain containing isoform a 
HDLBP                 0.038   high density lipoprotein binding protein 
Human BLASTP results (used to prepare the table)

Gene descriptions are from NCBI RefSeq. Search results were obtained with NCBI BLAST and RefSeq entries. When identical proteins are present, the self-match may not be listed first in BLASTP output. In such cases, the table above has been reordered to place it first.

See About the Figures for the scoring system used in the figure above right. The same scoring system was used in the table of BLASTP results.


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Guide to the Human Genome
Copyright © 2010 by Stewart Scherer. All rights reserved.

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