Guide to the Human Genome
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Name: SENP7 Sequence: fasta or formatted (985aa) NCBI GI: 116174736
Description:

sentrin/SUMO-specific protease 7 isoform 2

Referenced in:

Ubiquitin and Related Protein Modifications

Other entries for this name:
alt prot [1050aa] sentrin/SUMO-specific protease 7 isoform 1
Composition:

amino acid map
 Amino acid        Percentage    Count  Longest homopolymer
 A alanine             2.6         26           2
 C cysteine            1.8         18           1
 D aspartate           5.5         54           2
 E glutamate           8.6         85           2
 F phenylalanine       3.1         31           2
 G glycine             2.7         27           2
 H histidine           2.3         23           1
 I isoleucine          5.5         54           2
 K lysine              8.5         84           2
 L leucine            10.3        101           2
 M methionine          1.3         13           1
 N asparagine          5.3         52           2
 P proline             4.6         45           4
 Q glutamine           5.1         50           3
 R arginine            4.7         46           2
 S serine             12.9        127           3
 T threonine           6.2         61           2
 V valine              5.5         54           2
 W tryptophan          1.2         12           1
 Y tyrosine            2.2         22           2
Comparative genomics:

Search single species RefSeq proteins at NCBI
   H. sapiens
   M. musculus
   D. rerio
   C. intestinalis
   S. purpuratus
   D. melanogaster
   C. elegans
   A. thaliana
   S. cerevisiae
   E. coli W3110
   A. pernix K1

Search summary

comparative genomics plot

   Figure data

Additional searches of
RefSeq proteins at NCBI

   All
   Eukaryotes
   Bacteria
   Archaea
   Viruses
   Primates
   Mammals
   Vertebrates

Related human proteins:
Protein          Relative score         Description

Self-match            1.000   sentrin/SUMO-specific protease 7 isoform 2 
SENP7                 0.905   sentrin/SUMO-specific protease 7 isoform 1 
SENP6                 0.095   SUMO1/sentrin specific peptidase 6 isoform 2 
SENP6                 0.095   SUMO1/sentrin specific peptidase 6 isoform 1 
SENP1                 0.022   sentrin/SUMO-specific protease 1 
SENP2                 0.020   SUMO1/sentrin/SMT3 specific protease 2 
SENP5                 0.018   SUMO1/sentrin specific peptidase 5 
SENP3                 0.013   SUMO1/sentrin/SMT3 specific protease 3 
DSPP                  0.013   dentin sialophosphoprotein preproprotein 
ATRX                  0.011   transcriptional regulator ATRX isoform 2 
ATRX                  0.011   transcriptional regulator ATRX isoform 1 
CDC2L1                0.011   cell division cycle 2-like 1 (PITSLRE proteins) isof...
RIF1                  0.011   RAP1 interacting factor 1 
CDC2L1                0.010   cell division cycle 2-like 1 (PITSLRE proteins) isof...
NKTR                  0.010   natural killer-tumor recognition sequence 
SETD1B                0.009   SET domain containing 1B 
MYH6                  0.009   myosin heavy chain 6 
DPCR1                 0.009   diffuse panbronchiolitis critical region 1 protein ...
MYH7                  0.008   myosin, heavy chain 7, cardiac muscle, beta 
CDC2L2                0.008   cell division cycle 2-like 2 isoform 4 
CDC2L2                0.008   cell division cycle 2-like 2 isoform 1 
CEP290                0.008   centrosomal protein 290kDa 
CYLC1                 0.008   cylicin, basic protein of sperm head cytoskeleton 1...
BOD1L                 0.008   biorientation of chromosomes in cell division 1-like...
CDC2L1                0.008   cell division cycle 2-like 1 (PITSLRE proteins) isof...
CLIP1                 0.008   restin isoform b 
CLIP1                 0.008   restin isoform a 
TRAF3IP1              0.008   TNF receptor-associated factor 3 interacting protein...
CDC2L1                0.008   cell division cycle 2-like 1 (PITSLRE proteins) isof...
CDC2L1                0.008   cell division cycle 2-like 1 (PITSLRE proteins) isof...
Human BLASTP results (used to prepare the table)

Gene descriptions are from NCBI RefSeq. Search results were obtained with NCBI BLAST and RefSeq entries. When identical proteins are present, the self-match may not be listed first in BLASTP output. In such cases, the table above has been reordered to place it first.

See About the Figures for the scoring system used in the figure above right. The same scoring system was used in the table of BLASTP results.


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Guide to the Human Genome
Copyright © 2010 by Stewart Scherer. All rights reserved.

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