Guide to the Human Genome
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Name: COQ5 Sequence: fasta or formatted (327aa) NCBI GI: 116063536
Description:

coenzyme Q5 homolog, methyltransferase

Referenced in:

Oxidative Phosphorylation

Composition:

amino acid map
 Amino acid        Percentage    Count  Longest homopolymer
 A alanine             7.0         23           2
 C cysteine            1.5          5           1
 D aspartate           5.5         18           3
 E glutamate           7.0         23           3
 F phenylalanine       4.6         15           1
 G glycine             8.6         28           2
 H histidine           2.4          8           1
 I isoleucine          4.6         15           1
 K lysine              6.1         20           2
 L leucine            10.7         35           3
 M methionine          2.4          8           2
 N asparagine          2.4          8           2
 P proline             2.8          9           1
 Q glutamine           6.1         20           2
 R arginine            5.8         19           2
 S serine              7.0         23           2
 T threonine           2.4          8           1
 V valine              6.7         22           3
 W tryptophan          2.4          8           1
 Y tyrosine            3.7         12           1
Comparative genomics:

Search single species RefSeq proteins at NCBI
   H. sapiens
   M. musculus
   D. rerio
   C. intestinalis
   S. purpuratus
   D. melanogaster
   C. elegans
   A. thaliana
   S. cerevisiae
   E. coli W3110
   A. pernix K1

Search summary

comparative genomics plot

   Figure data

Additional searches of
RefSeq proteins at NCBI

   All
   Eukaryotes
   Bacteria
   Archaea
   Viruses
   Primates
   Mammals
   Vertebrates

Related human proteins:
Protein          Relative score         Description

Self-match            1.000   coenzyme Q5 homolog, methyltransferase 
C20orf7               0.025   hypothetical protein LOC79133 isoform 1 
RRP8                  0.017   ribosomal RNA processing 8, methyltransferase, homol...
METTL13               0.012   CGI-01 protein isoform 1 
EML6                  0.011   echinoderm microtubule associated protein like 6 [H...
ECE2                  0.011   endothelin converting enzyme 2 isoform C 
METTL13               0.011   CGI-01 protein isoform 2 
POLR3B                0.009   DNA-directed RNA polymerase III B isoform 2 
POLR3B                0.009   DNA-directed RNA polymerase III B isoform 1 
SYNE1                 0.008   spectrin repeat containing, nuclear envelope 1 isofo...
SYNE1                 0.008   spectrin repeat containing, nuclear envelope 1 isof...
CAMSAP1L1             0.008   calmodulin regulated spectrin-associated protein 1-l...
FAM184B               0.006   hypothetical protein LOC27146 
BEND2                 0.006   BEN domain containing 2 
LOC338667             0.005   PREDICTED: hypothetical protein LOC338667 
LOC338667             0.005   PREDICTED: hypothetical protein LOC338667 
LOC338667             0.005   PREDICTED: hypothetical protein LOC338667 
Human BLASTP results (used to prepare the table)

Gene descriptions are from NCBI RefSeq. Search results were obtained with NCBI BLAST and RefSeq entries. When identical proteins are present, the self-match may not be listed first in BLASTP output. In such cases, the table above has been reordered to place it first.

See About the Figures for the scoring system used in the figure above right. The same scoring system was used in the table of BLASTP results.


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Guide to the Human Genome
Copyright © 2010 by Stewart Scherer. All rights reserved.

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