Guide to the Human Genome
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Name: IQCK Sequence: fasta or formatted (287aa) NCBI GI: 23397456
Description:

IQ motif containing K

Referenced in:

Additional Interaction Domain Families

Composition:

amino acid map
 Amino acid        Percentage    Count  Longest homopolymer
 A alanine             6.3         18           2
 C cysteine            3.1          9           1
 D aspartate           2.1          6           2
 E glutamate          10.1         29           3
 F phenylalanine       5.9         17           2
 G glycine             1.4          4           1
 H histidine           2.8          8           1
 I isoleucine          5.2         15           1
 K lysine              8.7         25           2
 L leucine             7.0         20           3
 M methionine          2.1          6           1
 N asparagine          1.4          4           1
 P proline            10.1         29           2
 Q glutamine           5.9         17           2
 R arginine            4.9         14           1
 S serine              7.7         22           2
 T threonine           5.2         15           1
 V valine              5.9         17           2
 W tryptophan          2.1          6           1
 Y tyrosine            2.1          6           1
Comparative genomics:

Search single species RefSeq proteins at NCBI
   H. sapiens
   M. musculus
   D. rerio
   C. intestinalis
   S. purpuratus
   D. melanogaster
   C. elegans
   A. thaliana
   S. cerevisiae
   E. coli W3110
   A. pernix K1

Search summary

comparative genomics plot

   Figure data

Additional searches of
RefSeq proteins at NCBI

   All
   Eukaryotes
   Bacteria
   Archaea
   Viruses
   Primates
   Mammals
   Vertebrates

Related human proteins:
Protein          Relative score         Description

Self-match            1.000   IQ motif containing K 
EFCAB5                0.017   EF-hand calcium binding domain 5 isoform b 
EFCAB5                0.017   EF-hand calcium binding domain 5 isoform a 
SMTNL2                0.017   smoothelin-like 2 isoform 2 
SMTNL2                0.017   smoothelin-like 2 isoform 1 
LOC100290717          0.014   PREDICTED: hypothetical protein XP_002347797 
GPR179                0.014   GPR158-like 1 
SH3BP1                0.010   SH3-domain binding protein 1 
WARS2                 0.009   mitochondrial tryptophanyl tRNA synthetase 2 isoform ...
WARS2                 0.009   mitochondrial tryptophanyl tRNA synthetase 2 isoform...
IQCF5                 0.009   IQ motif containing F5 
DNAJC8                0.009   DnaJ (Hsp40) homolog, subfamily C, member 8 
TTN                   0.009   titin isoform N2-A 
XPO1                  0.009   exportin 1 
AK7                   0.009   adenylate kinase 7 
ARHGEF19              0.007   Rho guanine nucleotide exchange factor (GEF) 19 [Hom...
NOL12                 0.007   nucleolar protein 12 
USP8                  0.007   ubiquitin specific peptidase 8 
USP8                  0.007   ubiquitin specific peptidase 8 
USP8                  0.007   ubiquitin specific peptidase 8 
MRPL32                0.007   mitochondrial ribosomal protein L32 
UBE4A                 0.005   ubiquitination factor E4A 
LOC202051             0.005   hypothetical protein LOC202051 
OAS2                  0.005   2'-5'-oligoadenylate synthetase 2 isoform 2 
OAS2                  0.005   2'-5'-oligoadenylate synthetase 2 isoform 1 
FOXO4                 0.005   forkhead box O4 
ADRBK1                0.005   beta-adrenergic receptor kinase 1 
CDH10                 0.005   cadherin 10, type 2 preproprotein 
ZNF568                0.005   zinc finger protein 568 
C6orf182              0.005   hypothetical protein LOC285753 
Human BLASTP results (used to prepare the table)

Gene descriptions are from NCBI RefSeq. Search results were obtained with NCBI BLAST and RefSeq entries. When identical proteins are present, the self-match may not be listed first in BLASTP output. In such cases, the table above has been reordered to place it first.

See About the Figures for the scoring system used in the figure above right. The same scoring system was used in the table of BLASTP results.


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Guide to the Human Genome
Copyright © 2010 by Stewart Scherer. All rights reserved.

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