CD40 15899

Name: CD40	Sequence: fasta or formatted (203aa)		NCBI GI: 23312371
Description: CD40 antigen isoform 2 precursor		Referenced in: TNF and Related Signals
Other entries for this name: alt prot [277aa] CD40 antigen isoform 1 precursor
Composition: Amino acid Percentage Count Longest homopolymer A alanine 3.9 8 1 C cysteine 10.3 21 2 D aspartate 3.4 7 1 E glutamate 8.4 17 2 F phenylalanine 3.0 6 2 G glycine 8.4 17 2 H histidine 4.9 10 2 I isoleucine 2.0 4 1 K lysine 3.4 7 1 L leucine 7.9 16 2 M methionine 0.5 1 1 N asparagine 2.5 5 1 P proline 7.9 16 2 Q glutamine 5.9 12 2 R arginine 3.4 7 1 S serine 7.9 16 2 T threonine 7.4 15 1 V valine 5.4 11 1 W tryptophan 2.0 4 1 Y tyrosine 1.5 3 1			Comparative genomics: Search single species RefSeq proteins at NCBI H. sapiens M. musculus D. rerio C. intestinalis S. purpuratus D. melanogaster C. elegans A. thaliana S. cerevisiae E. coli W3110 A. pernix K1 Search summary Figure data Additional searches of RefSeq proteins at NCBI All Eukaryotes Bacteria Archaea Viruses Primates Mammals Vertebrates
Related human proteins: Protein Relative score Description Self-match 1.000 CD40 antigen isoform 2 precursor CD40 0.807 CD40 antigen isoform 1 precursor TNFRSF11A 0.256 tumor necrosis factor receptor superfamily, member 11... TNFRSF1B 0.193 tumor necrosis factor receptor 2 precursor LTBR 0.172 lymphotoxin beta receptor TNFRSF14 0.172 tumor necrosis factor receptor superfamily, member 1... TNFRSF11B 0.156 osteoprotegerin precursor TNFRSF6B 0.112 tumor necrosis factor receptor superfamily, member 6... TNFRSF6B 0.112 tumor necrosis factor receptor superfamily, member 6b... NGFR 0.091 nerve growth factor receptor precursor TNFRSF4 0.091 tumor necrosis factor receptor superfamily, member 4 ... FAS 0.088 tumor necrosis factor receptor superfamily, member 6... FAS 0.088 tumor necrosis factor receptor superfamily, member 6... FAS 0.088 tumor necrosis factor receptor superfamily, member 6 ... CD27 0.088 tumor necrosis factor receptor superfamily, member 7 ... TNFRSF21 0.067 tumor necrosis factor receptor superfamily, member 21... TNFRSF1A 0.058 tumor necrosis factor receptor 1 precursor TNFRSF8 0.053 tumor necrosis factor receptor superfamily, member 8... TNFRSF9 0.053 tumor necrosis factor receptor superfamily, member 9 ... TNFRSF25 0.053 tumor necrosis factor receptor superfamily, member 2... TNFRSF25 0.053 tumor necrosis factor receptor superfamily, member 2... TNFRSF25 0.053 tumor necrosis factor receptor superfamily, member 2... TNFRSF25 0.053 tumor necrosis factor receptor superfamily, member 25... KIAA1324 0.042 hypothetical protein LOC57535 LAMC3 0.040 laminin, gamma 3 precursor VWDE 0.035 von Willebrand factor D and EGF domains TNFRSF18 0.035 tumor necrosis factor receptor superfamily, member 1... MEGF11 0.035 multiple EGF-like-domains 11 DLL1 0.033 delta-like 1 TNFRSF18 0.033 tumor necrosis factor receptor superfamily, member 18... Human BLASTP results (used to prepare the table)

Gene descriptions are from NCBI RefSeq. Search results were obtained with NCBI BLAST and RefSeq entries. When identical proteins are present, the self-match may not be listed first in BLASTP output. In such cases, the table above has been reordered to place it first.

See About the Figures for the scoring system used in the figure above right. The same scoring system was used in the table of BLASTP results.