Guide to the Human Genome
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Name: TMEM74 Sequence: fasta or formatted (305aa) NCBI GI: 23308545
Description:

transmembrane protein 74

Not currently referenced in the text

Composition:

amino acid map
 Amino acid        Percentage    Count  Longest homopolymer
 A alanine             8.9         27           2
 C cysteine            3.3         10           2
 D aspartate           4.3         13           2
 E glutamate           8.5         26           3
 F phenylalanine       2.3          7           1
 G glycine             5.6         17           2
 H histidine           1.6          5           1
 I isoleucine          4.3         13           2
 K lysine              4.3         13           2
 L leucine            11.1         34           2
 M methionine          2.3          7           2
 N asparagine          5.2         16           2
 P proline             3.9         12           2
 Q glutamine           3.6         11           1
 R arginine            5.2         16           2
 S serine             12.8         39           3
 T threonine           5.6         17           1
 V valine              3.9         12           1
 W tryptophan          1.3          4           1
 Y tyrosine            2.0          6           1
Comparative genomics:

Search single species RefSeq proteins at NCBI
   H. sapiens
   M. musculus
   D. rerio
   C. intestinalis
   S. purpuratus
   D. melanogaster
   C. elegans
   A. thaliana
   S. cerevisiae
   E. coli W3110
   A. pernix K1

Search summary

comparative genomics plot

   Figure data

Additional searches of
RefSeq proteins at NCBI

   All
   Eukaryotes
   Bacteria
   Archaea
   Viruses
   Primates
   Mammals
   Vertebrates

Related human proteins:
Protein          Relative score         Description

Self-match            1.000   transmembrane protein 74 
C20orf46              0.216   hypothetical protein LOC55321 
NRSN1                 0.026   neurensin 1 
BRWD1                 0.015   bromodomain and WD repeat domain containing 1 isofor...
BRWD1                 0.015   bromodomain and WD repeat domain containing 1 isofor...
DMD                   0.015   dystrophin Dp140bc isoform 
DMD                   0.015   dystrophin Dp140ab isoform 
DMD                   0.015   dystrophin Dp140b isoform 
DMD                   0.015   dystrophin Dp71ab isoform 
DMD                   0.015   dystrophin Dp71b isoform 
EPN3                  0.014   epsin 3 
DMD                   0.012   dystrophin Dp427c isoform 
DMD                   0.012   dystrophin Dp140c isoform 
DMD                   0.012   dystrophin Dp116 isoform 
DMD                   0.012   dystrophin Dp260-2 isoform 
DMD                   0.012   dystrophin Dp260-1 isoform 
DMD                   0.012   dystrophin Dp427p2 isoform 
DMD                   0.012   dystrophin Dp427p1 isoform 
RNF146                0.012   ring finger protein 146 
DMD                   0.012   dystrophin Dp71a isoform 
DMD                   0.012   dystrophin Dp71 isoform 
DMD                   0.012   dystrophin Dp140 isoform 
DMD                   0.012   dystrophin Dp427l isoform 
DMD                   0.012   dystrophin Dp427m isoform 
C2orf16               0.012   hypothetical protein LOC84226 
RAPGEF2               0.012   Rap guanine nucleotide exchange factor 2 
MUC16                 0.010   mucin 16 
LOC100133915          0.010   PREDICTED: hypothetical protein 
ASXL1                 0.010   additional sex combs like 1 
ITGA2B                0.009   integrin alpha 2b preproprotein 
Human BLASTP results (used to prepare the table)

Gene descriptions are from NCBI RefSeq. Search results were obtained with NCBI BLAST and RefSeq entries. When identical proteins are present, the self-match may not be listed first in BLASTP output. In such cases, the table above has been reordered to place it first.

See About the Figures for the scoring system used in the figure above right. The same scoring system was used in the table of BLASTP results.


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Guide to the Human Genome
Copyright © 2010 by Stewart Scherer. All rights reserved.

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