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Search of human proteins with 23238248
BLASTP 2.2.11 [Jun-05-2005]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= gi|23238248 sorting nexin 16 isoform b [Homo sapiens]
(315 letters)
Database: hs.faa
37,866 sequences; 18,247,518 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
gi|23238248 sorting nexin 16 isoform b [Homo sapiens] 627 e-180
gi|23238244 sorting nexin 16 isoform a [Homo sapiens] 611 e-175
gi|23238246 sorting nexin 16 isoform a [Homo sapiens] 611 e-175
gi|31563383 serum/glucocorticoid regulated kinase 3 isoform 2 [H... 64 2e-10
gi|31563382 serum/glucocorticoid regulated kinase 3 isoform 1 [H... 64 2e-10
gi|75813626 serum/glucocorticoid regulated kinase 3 isoform 1 [H... 64 2e-10
gi|55770834 centromere protein F [Homo sapiens] 43 4e-04
gi|50897852 coiled-coil domain containing 88A isoform 2 [Homo sa... 39 0.006
gi|208022632 coiled-coil domain containing 88A isoform 1 [Homo s... 39 0.006
gi|31543452 PX domain containing serine/threonine kinase [Homo s... 39 0.006
gi|169217383 PREDICTED: similar to coiled-coil domain containing... 38 0.010
gi|42794779 myosin 18A isoform b [Homo sapiens] 37 0.017
gi|28416946 myosin 18A isoform a [Homo sapiens] 37 0.017
gi|6715600 golgi autoantigen, golgin subfamily a, 4 [Homo sapiens] 37 0.023
gi|237858799 adenylate kinase domain containing 1 isoform 1 [Hom... 37 0.030
gi|169218106 PREDICTED: hypothetical protein, partial [Homo sapi... 37 0.030
gi|7705682 geminin [Homo sapiens] 37 0.030
gi|115511012 coiled-coil domain containing 136 [Homo sapiens] 37 0.030
gi|23111036 sorting nexin 1 isoform c [Homo sapiens] 36 0.039
gi|23111032 sorting nexin 1 isoform b [Homo sapiens] 36 0.039
gi|23111034 sorting nexin 1 isoform a [Homo sapiens] 36 0.039
gi|110624781 myosin, heavy polypeptide 13, skeletal muscle [Homo... 36 0.039
gi|157311604 phosphodiesterase 4D interacting protein isoform 1 ... 36 0.051
gi|41327691 kinesin-like motor protein C20orf23 [Homo sapiens] 36 0.051
gi|98986453 myosin, heavy chain 3, skeletal muscle, embryonic [H... 35 0.066
gi|195947369 junction-mediating and regulatory protein [Homo sap... 35 0.066
gi|42740899 CTAGE family, member 5 isoform 3 [Homo sapiens] 35 0.066
gi|42740897 CTAGE family, member 5 isoform 1 [Homo sapiens] 35 0.066
gi|42740901 CTAGE family, member 5 isoform 4 [Homo sapiens] 35 0.066
gi|42740905 CTAGE family, member 5 isoform 2 [Homo sapiens] 35 0.066
>gi|23238248 sorting nexin 16 isoform b [Homo sapiens]
Length = 315
Score = 627 bits (1616), Expect = e-180
Identities = 315/315 (100%), Positives = 315/315 (100%)
Query: 1 MATPYVPVPMPIGNSASSFTTNRNQRSSSFGSVSTSSNSSKGQLEDSNMGNFKQTSVPDQ 60
MATPYVPVPMPIGNSASSFTTNRNQRSSSFGSVSTSSNSSKGQLEDSNMGNFKQTSVPDQ
Sbjct: 1 MATPYVPVPMPIGNSASSFTTNRNQRSSSFGSVSTSSNSSKGQLEDSNMGNFKQTSVPDQ 60
Query: 61 MDNTSSVCSSPLIRTKFTGTASSIEYSTRPRDTEEQNPETVNWEDRPSTPTILGYEVMEE 120
MDNTSSVCSSPLIRTKFTGTASSIEYSTRPRDTEEQNPETVNWEDRPSTPTILGYEVMEE
Sbjct: 61 MDNTSSVCSSPLIRTKFTGTASSIEYSTRPRDTEEQNPETVNWEDRPSTPTILGYEVMEE 120
Query: 121 RAKFTLKEMFPGFRLALPPKRWFKDNYNADFLEDRQLGLQAFLQNLVAHKDIANCLAVRE 180
RAKFTLKEMFPGFRLALPPKRWFKDNYNADFLEDRQLGLQAFLQNLVAHKDIANCLAVRE
Sbjct: 121 RAKFTLKEMFPGFRLALPPKRWFKDNYNADFLEDRQLGLQAFLQNLVAHKDIANCLAVRE 180
Query: 181 FLCLDDPPGPFDSLEESRAFCETLEETNYRLQKELLEKQKEMESLKKLLSEKQLHIDTLE 240
FLCLDDPPGPFDSLEESRAFCETLEETNYRLQKELLEKQKEMESLKKLLSEKQLHIDTLE
Sbjct: 181 FLCLDDPPGPFDSLEESRAFCETLEETNYRLQKELLEKQKEMESLKKLLSEKQLHIDTLE 240
Query: 241 NRIRTLSLEPEESLDVSETEGEQILKVESSALEVDQDVLDEESRADNKPCLSFSEPENAV 300
NRIRTLSLEPEESLDVSETEGEQILKVESSALEVDQDVLDEESRADNKPCLSFSEPENAV
Sbjct: 241 NRIRTLSLEPEESLDVSETEGEQILKVESSALEVDQDVLDEESRADNKPCLSFSEPENAV 300
Query: 301 SEIEVAEVAYDAEED 315
SEIEVAEVAYDAEED
Sbjct: 301 SEIEVAEVAYDAEED 315
>gi|23238244 sorting nexin 16 isoform a [Homo sapiens]
Length = 344
Score = 611 bits (1576), Expect = e-175
Identities = 315/344 (91%), Positives = 315/344 (91%), Gaps = 29/344 (8%)
Query: 1 MATPYVPVPMPIGNSASSFTTNRNQRSSSFGSVSTSSNSSKGQLEDSNMGNFKQTSVPDQ 60
MATPYVPVPMPIGNSASSFTTNRNQRSSSFGSVSTSSNSSKGQLEDSNMGNFKQTSVPDQ
Sbjct: 1 MATPYVPVPMPIGNSASSFTTNRNQRSSSFGSVSTSSNSSKGQLEDSNMGNFKQTSVPDQ 60
Query: 61 MDNTSSVCSSPLIRTKFTGTASSIEYSTRPRDTEEQNPETVNWEDRPSTPTILGYEVMEE 120
MDNTSSVCSSPLIRTKFTGTASSIEYSTRPRDTEEQNPETVNWEDRPSTPTILGYEVMEE
Sbjct: 61 MDNTSSVCSSPLIRTKFTGTASSIEYSTRPRDTEEQNPETVNWEDRPSTPTILGYEVMEE 120
Query: 121 RAKFT-----------------------------LKEMFPGFRLALPPKRWFKDNYNADF 151
RAKFT LKEMFPGFRLALPPKRWFKDNYNADF
Sbjct: 121 RAKFTVYKILVKKTPEESWVVFRRYTDFSRLNDKLKEMFPGFRLALPPKRWFKDNYNADF 180
Query: 152 LEDRQLGLQAFLQNLVAHKDIANCLAVREFLCLDDPPGPFDSLEESRAFCETLEETNYRL 211
LEDRQLGLQAFLQNLVAHKDIANCLAVREFLCLDDPPGPFDSLEESRAFCETLEETNYRL
Sbjct: 181 LEDRQLGLQAFLQNLVAHKDIANCLAVREFLCLDDPPGPFDSLEESRAFCETLEETNYRL 240
Query: 212 QKELLEKQKEMESLKKLLSEKQLHIDTLENRIRTLSLEPEESLDVSETEGEQILKVESSA 271
QKELLEKQKEMESLKKLLSEKQLHIDTLENRIRTLSLEPEESLDVSETEGEQILKVESSA
Sbjct: 241 QKELLEKQKEMESLKKLLSEKQLHIDTLENRIRTLSLEPEESLDVSETEGEQILKVESSA 300
Query: 272 LEVDQDVLDEESRADNKPCLSFSEPENAVSEIEVAEVAYDAEED 315
LEVDQDVLDEESRADNKPCLSFSEPENAVSEIEVAEVAYDAEED
Sbjct: 301 LEVDQDVLDEESRADNKPCLSFSEPENAVSEIEVAEVAYDAEED 344
>gi|23238246 sorting nexin 16 isoform a [Homo sapiens]
Length = 344
Score = 611 bits (1576), Expect = e-175
Identities = 315/344 (91%), Positives = 315/344 (91%), Gaps = 29/344 (8%)
Query: 1 MATPYVPVPMPIGNSASSFTTNRNQRSSSFGSVSTSSNSSKGQLEDSNMGNFKQTSVPDQ 60
MATPYVPVPMPIGNSASSFTTNRNQRSSSFGSVSTSSNSSKGQLEDSNMGNFKQTSVPDQ
Sbjct: 1 MATPYVPVPMPIGNSASSFTTNRNQRSSSFGSVSTSSNSSKGQLEDSNMGNFKQTSVPDQ 60
Query: 61 MDNTSSVCSSPLIRTKFTGTASSIEYSTRPRDTEEQNPETVNWEDRPSTPTILGYEVMEE 120
MDNTSSVCSSPLIRTKFTGTASSIEYSTRPRDTEEQNPETVNWEDRPSTPTILGYEVMEE
Sbjct: 61 MDNTSSVCSSPLIRTKFTGTASSIEYSTRPRDTEEQNPETVNWEDRPSTPTILGYEVMEE 120
Query: 121 RAKFT-----------------------------LKEMFPGFRLALPPKRWFKDNYNADF 151
RAKFT LKEMFPGFRLALPPKRWFKDNYNADF
Sbjct: 121 RAKFTVYKILVKKTPEESWVVFRRYTDFSRLNDKLKEMFPGFRLALPPKRWFKDNYNADF 180
Query: 152 LEDRQLGLQAFLQNLVAHKDIANCLAVREFLCLDDPPGPFDSLEESRAFCETLEETNYRL 211
LEDRQLGLQAFLQNLVAHKDIANCLAVREFLCLDDPPGPFDSLEESRAFCETLEETNYRL
Sbjct: 181 LEDRQLGLQAFLQNLVAHKDIANCLAVREFLCLDDPPGPFDSLEESRAFCETLEETNYRL 240
Query: 212 QKELLEKQKEMESLKKLLSEKQLHIDTLENRIRTLSLEPEESLDVSETEGEQILKVESSA 271
QKELLEKQKEMESLKKLLSEKQLHIDTLENRIRTLSLEPEESLDVSETEGEQILKVESSA
Sbjct: 241 QKELLEKQKEMESLKKLLSEKQLHIDTLENRIRTLSLEPEESLDVSETEGEQILKVESSA 300
Query: 272 LEVDQDVLDEESRADNKPCLSFSEPENAVSEIEVAEVAYDAEED 315
LEVDQDVLDEESRADNKPCLSFSEPENAVSEIEVAEVAYDAEED
Sbjct: 301 LEVDQDVLDEESRADNKPCLSFSEPENAVSEIEVAEVAYDAEED 344
>gi|31563383 serum/glucocorticoid regulated kinase 3 isoform 2 [Homo
sapiens]
Length = 464
Score = 63.9 bits (154), Expect = 2e-10
Identities = 31/72 (43%), Positives = 44/72 (61%)
Query: 125 TLKEMFPGFRLALPPKRWFKDNYNADFLEDRQLGLQAFLQNLVAHKDIANCLAVREFLCL 184
TLK+ FP L +P KR F DN++ DF++ R+ GL F+QNLV + ++ N VR FL +
Sbjct: 60 TLKKQFPAMALKIPAKRIFGDNFDPDFIKQRRAGLNEFIQNLVRYPELYNHPDVRAFLQM 119
Query: 185 DDPPGPFDSLEE 196
D P D E+
Sbjct: 120 DSPKHQSDPSED 131
>gi|31563382 serum/glucocorticoid regulated kinase 3 isoform 1 [Homo
sapiens]
Length = 496
Score = 63.9 bits (154), Expect = 2e-10
Identities = 31/72 (43%), Positives = 44/72 (61%)
Query: 125 TLKEMFPGFRLALPPKRWFKDNYNADFLEDRQLGLQAFLQNLVAHKDIANCLAVREFLCL 184
TLK+ FP L +P KR F DN++ DF++ R+ GL F+QNLV + ++ N VR FL +
Sbjct: 60 TLKKQFPAMALKIPAKRIFGDNFDPDFIKQRRAGLNEFIQNLVRYPELYNHPDVRAFLQM 119
Query: 185 DDPPGPFDSLEE 196
D P D E+
Sbjct: 120 DSPKHQSDPSED 131
>gi|75813626 serum/glucocorticoid regulated kinase 3 isoform 1 [Homo
sapiens]
Length = 496
Score = 63.9 bits (154), Expect = 2e-10
Identities = 31/72 (43%), Positives = 44/72 (61%)
Query: 125 TLKEMFPGFRLALPPKRWFKDNYNADFLEDRQLGLQAFLQNLVAHKDIANCLAVREFLCL 184
TLK+ FP L +P KR F DN++ DF++ R+ GL F+QNLV + ++ N VR FL +
Sbjct: 60 TLKKQFPAMALKIPAKRIFGDNFDPDFIKQRRAGLNEFIQNLVRYPELYNHPDVRAFLQM 119
Query: 185 DDPPGPFDSLEE 196
D P D E+
Sbjct: 120 DSPKHQSDPSED 131
>gi|55770834 centromere protein F [Homo sapiens]
Length = 3114
Score = 42.7 bits (99), Expect = 4e-04
Identities = 38/155 (24%), Positives = 68/155 (43%), Gaps = 27/155 (17%)
Query: 156 QLGLQAFLQNLVAHKDIANCLAVREFLCL----------DDPPGPFDSLEESRAFCE--- 202
Q G + L NL C +V E C + P P +EE + CE
Sbjct: 1502 QTGDMSLLSNLEGAVSANQC-SVDEVFCSSLQEENLTRKETPSAPAKGVEELESLCEVYR 1560
Query: 203 -TLEETNYRLQKELLEKQKEMESLKKLLSEKQLHIDTL-----------ENRIRTLSLEP 250
+LE+ +++ + + K KE++ L++LLS ++ +D L + ++ +++LE
Sbjct: 1561 QSLEKLEEKMESQGIMKNKEIQELEQLLSSERQELDCLRKQYLSENEQWQQKLTSVTLEM 1620
Query: 251 EESLDVSETEGEQILKVESSALEVDQDVLDEESRA 285
E L + + EQ L +E + LD SR+
Sbjct: 1621 ESKLAAEKKQTEQ-LSLELEVARLQLQGLDLSSRS 1654
Score = 31.2 bits (69), Expect = 1.3
Identities = 15/59 (25%), Positives = 31/59 (52%)
Query: 201 CETLEETNYRLQKELLEKQKEMESLKKLLSEKQLHIDTLENRIRTLSLEPEESLDVSET 259
CE+LE+T ++ EL K+ ++ + L+ + I+ LE ++ E E S +++
Sbjct: 76 CESLEKTKQKISHELQVKESQVNFQEGQLNSGKKQIEKLEQELKRCKSELERSQQAAQS 134
Score = 30.0 bits (66), Expect = 2.8
Identities = 21/101 (20%), Positives = 50/101 (49%), Gaps = 1/101 (0%)
Query: 203 TLEETNYRLQKELLEKQKEMESLKKLLSEKQLHIDTLENRIRTLSLEPEESLDVSETEGE 262
TL L K++ EKQ ++ L KLLS + ++ E + E + ++++ + + +
Sbjct: 2207 TLRSEKENLTKQIQEKQGQLSELDKLLSSFKSLLEEKEQAEIQIKEESKTAVEMLQNQLK 2266
Query: 263 QILKVESSALEVDQDVLDEESRADNKPCLSFSEPENAVSEI 303
+ L +AL DQ+++ ++ + P + N++ ++
Sbjct: 2267 E-LNEAVAALCGDQEIMKATEQSLDPPIEEEHQLRNSIEKL 2306
Score = 28.9 bits (63), Expect = 6.2
Identities = 19/75 (25%), Positives = 38/75 (50%), Gaps = 8/75 (10%)
Query: 204 LEETNYRLQKELLEKQKEMES----LKKLLSEKQLHIDTLENRIRTLSLEPEESLDVSET 259
LEE L L+K +E+E LKK ++Q +D+LE ++ + ++ ++ +T
Sbjct: 5 LEEWKEGLPTRALQKIQELEGQLDKLKKEKQQRQFQLDSLEAALQ----KQKQKVENEKT 60
Query: 260 EGEQILKVESSALEV 274
EG + + +E+
Sbjct: 61 EGTNLKRENQRLMEI 75
>gi|50897852 coiled-coil domain containing 88A isoform 2 [Homo
sapiens]
Length = 1843
Score = 38.9 bits (89), Expect = 0.006
Identities = 26/94 (27%), Positives = 48/94 (51%), Gaps = 2/94 (2%)
Query: 191 FDSLEESRAFCETLEETNYRLQKELLEKQKEMESLKKLLSEKQLHIDTLENRIRTLSLEP 250
F E + L+ N RLQK L K+++ L+ L + ++ TL+ + L +
Sbjct: 748 FKKTERLEVSYQGLDIENQRLQKTLENSNKKIQQLESELQDLEMENQTLQKNLEELKIS- 806
Query: 251 EESLDVSETEGEQILKVESSALEVDQDVLDEESR 284
+ L+ E E + L+ E+S LE D+ L++E++
Sbjct: 807 SKRLEQLEKENKS-LEQETSQLEKDKKQLEKENK 839
Score = 35.0 bits (79), Expect = 0.087
Identities = 35/125 (28%), Positives = 55/125 (44%), Gaps = 9/125 (7%)
Query: 192 DSLEESRAFCETLEETNYRLQKELLEK---QKEMESLKKLLSEKQLHIDTLENRIRTLSL 248
D +E++ E+++ET+ +L K EK +KE+E K EK + LEN + L
Sbjct: 584 DIEKENKILHESIKETSSKLSKIEFEKRQIKKELEHYK----EKGERAEELENELH--HL 637
Query: 249 EPEESLDVSETEGEQILKVESSALEVDQDVLDEESRADNKPCLSFSEPENAVSEIEVAEV 308
E E L + +I + ALE + L+ E+R K SF + +E
Sbjct: 638 EKENELLQKKITNLKITCEKIEALEQENSELERENRKLKKTLDSFKNLTFQLESLEKENS 697
Query: 309 AYDAE 313
D E
Sbjct: 698 QLDEE 702
>gi|208022632 coiled-coil domain containing 88A isoform 1 [Homo
sapiens]
Length = 1870
Score = 38.9 bits (89), Expect = 0.006
Identities = 26/94 (27%), Positives = 48/94 (51%), Gaps = 2/94 (2%)
Query: 191 FDSLEESRAFCETLEETNYRLQKELLEKQKEMESLKKLLSEKQLHIDTLENRIRTLSLEP 250
F E + L+ N RLQK L K+++ L+ L + ++ TL+ + L +
Sbjct: 748 FKKTERLEVSYQGLDIENQRLQKTLENSNKKIQQLESELQDLEMENQTLQKNLEELKIS- 806
Query: 251 EESLDVSETEGEQILKVESSALEVDQDVLDEESR 284
+ L+ E E + L+ E+S LE D+ L++E++
Sbjct: 807 SKRLEQLEKENKS-LEQETSQLEKDKKQLEKENK 839
Score = 35.0 bits (79), Expect = 0.087
Identities = 35/125 (28%), Positives = 55/125 (44%), Gaps = 9/125 (7%)
Query: 192 DSLEESRAFCETLEETNYRLQKELLEK---QKEMESLKKLLSEKQLHIDTLENRIRTLSL 248
D +E++ E+++ET+ +L K EK +KE+E K EK + LEN + L
Sbjct: 584 DIEKENKILHESIKETSSKLSKIEFEKRQIKKELEHYK----EKGERAEELENELH--HL 637
Query: 249 EPEESLDVSETEGEQILKVESSALEVDQDVLDEESRADNKPCLSFSEPENAVSEIEVAEV 308
E E L + +I + ALE + L+ E+R K SF + +E
Sbjct: 638 EKENELLQKKITNLKITCEKIEALEQENSELERENRKLKKTLDSFKNLTFQLESLEKENS 697
Query: 309 AYDAE 313
D E
Sbjct: 698 QLDEE 702
>gi|31543452 PX domain containing serine/threonine kinase [Homo
sapiens]
Length = 578
Score = 38.9 bits (89), Expect = 0.006
Identities = 19/51 (37%), Positives = 31/51 (60%), Gaps = 1/51 (1%)
Query: 132 GFRLALPPKRWFKDNYNADFLEDRQLGLQAFLQNLVAHKDIANCLAVREFL 182
G L LPPK+ N + +F+ +RQ GLQ +L + + ++NC V++FL
Sbjct: 70 GLSLPLPPKKLI-GNMDREFIAERQKGLQNYLNVITTNHILSNCELVKKFL 119
>gi|169217383 PREDICTED: similar to coiled-coil domain containing 29
[Homo sapiens]
Length = 185
Score = 38.1 bits (87), Expect = 0.010
Identities = 36/152 (23%), Positives = 69/152 (45%), Gaps = 12/152 (7%)
Query: 164 QNLVAHKDIANCLAVREFLCLDDPPGPFDSL----EESRAFCETLEETNYRLQKELLEKQ 219
++ V H+D+ + L + FD L E + C L + N +Q+ELL +
Sbjct: 12 EDFVCHEDLKTDQLKMDIL-IKKLKQKFDDLTPEEEAVSSKCVNLAKDNQVIQQELLSMK 70
Query: 220 K------EMESLKKLLSEKQLHIDT-LENRIRTLSLEPEESLDVSETEGEQILKVESSAL 272
K ++E KK+L E+ L++ T +EN + LS E + E + + K+E L
Sbjct: 71 KVQQECEKLEEDKKMLEEEILNLKTHMENNMVELSKLQEYKSETDERAIQAVEKLEEIHL 130
Query: 273 EVDQDVLDEESRADNKPCLSFSEPENAVSEIE 304
+++ D +++ R + + +S +E
Sbjct: 131 QMEADCVEQIIRETKRTVAVLDTCSHLLSSLE 162
>gi|42794779 myosin 18A isoform b [Homo sapiens]
Length = 2039
Score = 37.4 bits (85), Expect = 0.017
Identities = 29/103 (28%), Positives = 51/103 (49%), Gaps = 9/103 (8%)
Query: 191 FDSLEESRAFCETLEETNYRLQKELLEKQKEME-----SLKKLLSEKQLHIDTLENRIRT 245
FDS E S+A E E +LQ+E L+++K+M SLK+ L EK + I ++ +
Sbjct: 1463 FDS-ELSQAHEEAQRE---KLQREKLQREKDMLLAEAFSLKQQLEEKDMDIAGFTQKVVS 1518
Query: 246 LSLEPEESLDVSETEGEQILKVESSALEVDQDVLDEESRADNK 288
L E ++ + + KV+ +++ V D+E D +
Sbjct: 1519 LEAELQDISSQESKDEASLAKVKKQLRDLEAKVKDQEEELDEQ 1561
Score = 30.4 bits (67), Expect = 2.1
Identities = 28/106 (26%), Positives = 51/106 (48%), Gaps = 7/106 (6%)
Query: 210 RLQKELLEKQKEMESLKKLLSEKQLHIDTLENR-IRTLSLEPEESLDVSETEGEQILKVE 268
R +KE+ E Q + ++LKK + + + ++ +E R IR + E +D + GE LK E
Sbjct: 1321 RAEKEMKELQTQYDALKKQM--EVMEMEVMEARLIRAAEINGE--VDDDDAGGEWRLKYE 1376
Query: 269 SSALEVDQDVLDEESRADNKPCLSFSEPENAVSEIEVAEVAYDAEE 314
+ EVD + ++K L + E + ++ D+EE
Sbjct: 1377 RAVREVDFTKKRLQQEFEDK--LEVEQQNKRQLERRLGDLQADSEE 1420
Score = 29.3 bits (64), Expect = 4.8
Identities = 27/101 (26%), Positives = 48/101 (47%), Gaps = 9/101 (8%)
Query: 205 EETNYRLQKELLEKQKEMESLKKLLSEKQLHIDTLENRIRTLSLEPEESLDVSETEGEQI 264
+E N RLQ++L + ++EM L + +E LE + ESL+ + +
Sbjct: 1870 KEQNKRLQRQLRDTKEEMGELARKEAEASRKKHELEMDL--------ESLEAANQSLQAD 1921
Query: 265 LKVESSALEVDQDVLDEESRADNKPCLSFSEPENAV-SEIE 304
LK+ + Q +++E +D L SE ++ V SE+E
Sbjct: 1922 LKLAFKRIGDLQAAIEDEMESDENEDLINSEGDSDVDSELE 1962
>gi|28416946 myosin 18A isoform a [Homo sapiens]
Length = 2054
Score = 37.4 bits (85), Expect = 0.017
Identities = 29/103 (28%), Positives = 51/103 (49%), Gaps = 9/103 (8%)
Query: 191 FDSLEESRAFCETLEETNYRLQKELLEKQKEME-----SLKKLLSEKQLHIDTLENRIRT 245
FDS E S+A E E +LQ+E L+++K+M SLK+ L EK + I ++ +
Sbjct: 1463 FDS-ELSQAHEEAQRE---KLQREKLQREKDMLLAEAFSLKQQLEEKDMDIAGFTQKVVS 1518
Query: 246 LSLEPEESLDVSETEGEQILKVESSALEVDQDVLDEESRADNK 288
L E ++ + + KV+ +++ V D+E D +
Sbjct: 1519 LEAELQDISSQESKDEASLAKVKKQLRDLEAKVKDQEEELDEQ 1561
Score = 30.4 bits (67), Expect = 2.1
Identities = 28/106 (26%), Positives = 51/106 (48%), Gaps = 7/106 (6%)
Query: 210 RLQKELLEKQKEMESLKKLLSEKQLHIDTLENR-IRTLSLEPEESLDVSETEGEQILKVE 268
R +KE+ E Q + ++LKK + + + ++ +E R IR + E +D + GE LK E
Sbjct: 1321 RAEKEMKELQTQYDALKKQM--EVMEMEVMEARLIRAAEINGE--VDDDDAGGEWRLKYE 1376
Query: 269 SSALEVDQDVLDEESRADNKPCLSFSEPENAVSEIEVAEVAYDAEE 314
+ EVD + ++K L + E + ++ D+EE
Sbjct: 1377 RAVREVDFTKKRLQQEFEDK--LEVEQQNKRQLERRLGDLQADSEE 1420
>gi|6715600 golgi autoantigen, golgin subfamily a, 4 [Homo sapiens]
Length = 2230
Score = 37.0 bits (84), Expect = 0.023
Identities = 31/137 (22%), Positives = 62/137 (45%), Gaps = 32/137 (23%)
Query: 210 RLQKELLEKQKEMESLKKLLSEKQLHIDTLENRIRTLSLEPEESLDVSETEG-------- 261
+L+KEL E + +K+ L EK++ I +L ++ L+++ + S+ +SE E
Sbjct: 1343 QLKKELSENINAVTLMKEELKEKKVEISSLSKQLTDLNVQLQNSISLSEKEAAISSLRKQ 1402
Query: 262 -------------------EQILKVESSALEVDQDVLDEESRADNKPCLSFSEPENAVSE 302
+ + K + SALE D ++ S K F++ +N V E
Sbjct: 1403 YDEEKCELLDQVQDLSFKVDTLSKEKISALEQVDDWSNKFSEWKKKAQSRFTQHQNTVKE 1462
Query: 303 IEV-----AEVAYDAEE 314
+++ ++ AY+ +E
Sbjct: 1463 LQIQLELKSKEAYEKDE 1479
Score = 32.0 bits (71), Expect = 0.73
Identities = 29/127 (22%), Positives = 60/127 (47%), Gaps = 6/127 (4%)
Query: 159 LQAFLQNLVAHKDIANCLAVREFLCLDDPPGPFDS-LEESRAFCETLEETNYRLQKELLE 217
L L+N KDI + V++ + D+ ++E+ TLE Y ++ EL
Sbjct: 1544 LNEVLKNYNQQKDIEHKELVQKLQHFQELGEEKDNRVKEAEEKILTLENQVYSMKAELET 1603
Query: 218 KQKEMESLKKLLSEKQLHIDTLENRIRTLSLEPEESLDVSETEGEQILKVESSALEVDQD 277
K+KE+E + + K+ + LE+R LE E + ++E + + K+ + ++
Sbjct: 1604 KKKELEHVNLSVKSKEEELKALEDR-----LESESAAKLAELKRKAEQKIAAIKKQLLSQ 1658
Query: 278 VLDEESR 284
+ ++E +
Sbjct: 1659 MEEKEEQ 1665
Score = 31.2 bits (69), Expect = 1.3
Identities = 32/127 (25%), Positives = 59/127 (46%), Gaps = 11/127 (8%)
Query: 195 EESRAFCETLEETNYRLQKELLEKQKEMESLKKLLSEKQL-HIDTL-ENRIRTLSLEPEE 252
E+ + +T EE LQ+EL ++E+ + K SE+Q+ + L E + E +
Sbjct: 439 EQIKTIEKTSEEERISLQQELSRVKQEVVDVMKKSSEEQIAKLQKLHEKELARKEQELTK 498
Query: 253 SLDVSETEGEQILKV-----ESSALEVDQDVLDEESRADNKPCLS----FSEPENAVSEI 303
L E E ++ +KV +S L++ Q+ +ES A + L +E EN + ++
Sbjct: 499 KLQTREREFQEQMKVALEKSQSEYLKISQEKEQQESLALEELELQKKAILTESENKLRDL 558
Query: 304 EVAEVAY 310
+ Y
Sbjct: 559 QQEAETY 565
>gi|237858799 adenylate kinase domain containing 1 isoform 1 [Homo
sapiens]
Length = 1911
Score = 36.6 bits (83), Expect = 0.030
Identities = 36/103 (34%), Positives = 54/103 (52%), Gaps = 17/103 (16%)
Query: 210 RLQKELLEKQKEMESLKKLLSEKQLHIDTLENRIRTLSLEPEESLDVSETEGEQILKVES 269
RL +EL +K+KE E +K +E++L ++ ENR R L L ++ + ET+ E ++E
Sbjct: 689 RLLEELQKKKKEEEEARKA-TEEELRLEE-ENR-RLLELMKVKAKEAEETDNEDEEEIEG 745
Query: 270 SALEVDQDV----------LDEESRADNKPCLSFSEPENAVSE 302
LEV ++ L EE A P +EPE AVSE
Sbjct: 746 DELEVHEEPEASHDTRGSWLPEEFEASEVP---ETEPE-AVSE 784
>gi|169218106 PREDICTED: hypothetical protein, partial [Homo
sapiens]
Length = 436
Score = 36.6 bits (83), Expect = 0.030
Identities = 23/78 (29%), Positives = 42/78 (53%), Gaps = 1/78 (1%)
Query: 207 TNYRLQKELLEKQKEMESLKKLLSEKQLHIDTLENRIRTLSLEPEESLDVSETEGEQILK 266
TN L+++ E Q+E++ ++ SE QLHI L+ ++ T + + V E EG Q+ +
Sbjct: 5 TNEELKEKNAELQEELQLVETEKSEIQLHIKELKRKLETDKIPLPQEGQVREQEG-QVRE 63
Query: 267 VESSALEVDQDVLDEESR 284
E E + V ++E +
Sbjct: 64 QEGQVREQEGQVREQEGQ 81
>gi|7705682 geminin [Homo sapiens]
Length = 209
Score = 36.6 bits (83), Expect = 0.030
Identities = 36/104 (34%), Positives = 51/104 (49%), Gaps = 12/104 (11%)
Query: 198 RAFCETLEETNYRLQKELLEKQKEMESLK---KLLSEKQLHIDTLENRIRTLSLEP---E 251
+A E L+E N +L KE+ +K E+ LK K L+E H+ + I L+ EP
Sbjct: 108 KALYEALKE-NEKLHKEIEQKDNEIARLKKENKELAEVAEHVQYMAELIERLNGEPLDNF 166
Query: 252 ESLDVSETEGEQILKVESSALEVDQDVLDEE----SRADNKPCL 291
ESLD E + E+ VE S +E + E S D KPC+
Sbjct: 167 ESLDNQEFDSEE-ETVEDSLVEDSEIGTCAEGTVSSSTDAKPCI 209
>gi|115511012 coiled-coil domain containing 136 [Homo sapiens]
Length = 1154
Score = 36.6 bits (83), Expect = 0.030
Identities = 23/75 (30%), Positives = 39/75 (52%), Gaps = 3/75 (4%)
Query: 211 LQKELLEKQKEMESLKKLLSEKQLHIDTLENRIRTLSLEPEESLDVSETEGEQILKVESS 270
LQ++L Q E+E ++++ + ++ I +L + S EP SL +S+ G L+ E
Sbjct: 171 LQEDLCRMQNELEDMERIRGDYEMEIASLRAEMEMKSSEPSGSLGLSDYSG---LQEELQ 227
Query: 271 ALEVDQDVLDEESRA 285
L L+EE RA
Sbjct: 228 ELRERYHFLNEEYRA 242
Score = 29.6 bits (65), Expect = 3.6
Identities = 23/75 (30%), Positives = 39/75 (52%), Gaps = 6/75 (8%)
Query: 194 LEESRAFCETLEETNYRLQKELLEKQKEMESLKKLLSEKQLHIDTLENRIRTLSLEPEES 253
LEE + + EE RLQ+EL K + E L+ S + L++R+ TL ++
Sbjct: 324 LEELQHHRQVSEEEQRRLQREL--KCAQNEVLRFQTSHSVTQNEELKSRLCTL----QKK 377
Query: 254 LDVSETEGEQILKVE 268
D S+ E ++LK++
Sbjct: 378 YDTSQDEQNELLKMQ 392
Score = 28.9 bits (63), Expect = 6.2
Identities = 23/81 (28%), Positives = 37/81 (45%), Gaps = 9/81 (11%)
Query: 217 EKQKEMESLKKLLSEKQLHIDTLENRIRTLSLEPEESLDVSETEGEQILKVESSALEVDQ 276
EK++EME KK + E + E L EP + + TE ++ + + E ++
Sbjct: 1038 EKKEEMEEEKKQVKE-----EAKEQCGDELVAEPADPEEAKSTEDQEENEEDKEEEEKEE 1092
Query: 277 DVLDEESRADNKPCLSFSEPE 297
D +EE AD+ S PE
Sbjct: 1093 DSEEEEDDADS----SLESPE 1109
>gi|23111036 sorting nexin 1 isoform c [Homo sapiens]
Length = 474
Score = 36.2 bits (82), Expect = 0.039
Identities = 34/147 (23%), Positives = 67/147 (45%), Gaps = 21/147 (14%)
Query: 123 KFTLKEMFPGFRLALPPKRWF----------KDNYNADFLEDRQLGLQAFLQNLVAHKDI 172
K + K GF + PP++ +D+ +A+FLE R+ L+ +LQ +V H +
Sbjct: 196 KLSEKHSQNGFIVPPPPEKSLIGMTKVKVGKEDSSSAEFLEKRRAALERYLQRIVNHPTM 255
Query: 173 ANCLAVREFLCLDDPPGPFDS--------LEESRAFCETLEETNYRLQKELL---EKQKE 221
VREFL ++ P + L+ + + + ++ + + EK +E
Sbjct: 256 LQDPDVREFLEKEELPRAVGTQTLSGAGLLKMFNKATDAVSKMTIKMNESDIWFEEKLQE 315
Query: 222 MESLKKLLSEKQLHIDTLENRIRTLSL 248
+E ++ L + ++TL N + L+L
Sbjct: 316 VECEEQRLRKLHAVVETLVNHRKELAL 342
>gi|23111032 sorting nexin 1 isoform b [Homo sapiens]
Length = 457
Score = 36.2 bits (82), Expect = 0.039
Identities = 34/147 (23%), Positives = 67/147 (45%), Gaps = 21/147 (14%)
Query: 123 KFTLKEMFPGFRLALPPKRWF----------KDNYNADFLEDRQLGLQAFLQNLVAHKDI 172
K + K GF + PP++ +D+ +A+FLE R+ L+ +LQ +V H +
Sbjct: 131 KLSEKHSQNGFIVPPPPEKSLIGMTKVKVGKEDSSSAEFLEKRRAALERYLQRIVNHPTM 190
Query: 173 ANCLAVREFLCLDDPPGPFDS--------LEESRAFCETLEETNYRLQKELL---EKQKE 221
VREFL ++ P + L+ + + + ++ + + EK +E
Sbjct: 191 LQDPDVREFLEKEELPRAVGTQTLSGAGLLKMFNKATDAVSKMTIKMNESDIWFEEKLQE 250
Query: 222 MESLKKLLSEKQLHIDTLENRIRTLSL 248
+E ++ L + ++TL N + L+L
Sbjct: 251 VECEEQRLRKLHAVVETLVNHRKELAL 277
>gi|23111034 sorting nexin 1 isoform a [Homo sapiens]
Length = 522
Score = 36.2 bits (82), Expect = 0.039
Identities = 34/147 (23%), Positives = 67/147 (45%), Gaps = 21/147 (14%)
Query: 123 KFTLKEMFPGFRLALPPKRWF----------KDNYNADFLEDRQLGLQAFLQNLVAHKDI 172
K + K GF + PP++ +D+ +A+FLE R+ L+ +LQ +V H +
Sbjct: 196 KLSEKHSQNGFIVPPPPEKSLIGMTKVKVGKEDSSSAEFLEKRRAALERYLQRIVNHPTM 255
Query: 173 ANCLAVREFLCLDDPPGPFDS--------LEESRAFCETLEETNYRLQKELL---EKQKE 221
VREFL ++ P + L+ + + + ++ + + EK +E
Sbjct: 256 LQDPDVREFLEKEELPRAVGTQTLSGAGLLKMFNKATDAVSKMTIKMNESDIWFEEKLQE 315
Query: 222 MESLKKLLSEKQLHIDTLENRIRTLSL 248
+E ++ L + ++TL N + L+L
Sbjct: 316 VECEEQRLRKLHAVVETLVNHRKELAL 342
>gi|110624781 myosin, heavy polypeptide 13, skeletal muscle [Homo
sapiens]
Length = 1938
Score = 36.2 bits (82), Expect = 0.039
Identities = 26/122 (21%), Positives = 58/122 (47%), Gaps = 1/122 (0%)
Query: 194 LEESRAFCETLEETNYRLQKELLEKQKEMESLKKLLSEKQLHIDTLENRIRTLSLEPEES 253
L+ S+ LE +++++L +K+ E+ L+ + ++Q+H + +I+ L EE
Sbjct: 1063 LKMSQESIMDLENDKQQIEEKLKKKEFELSQLQAKIDDEQVHSLQFQKKIKELQARIEEL 1122
Query: 254 LDVSETEGEQILKVESSALEVDQDVLDEESRADNKPCLSFSEPE-NAVSEIEVAEVAYDA 312
+ E E K+E ++ +++ + R + + ++ E N E E ++ D
Sbjct: 1123 EEEIEAEHTLRAKIEKQRSDLARELEEISERLEEASGATSAQIEMNKKREAEFQKMRRDL 1182
Query: 313 EE 314
EE
Sbjct: 1183 EE 1184
Score = 34.7 bits (78), Expect = 0.11
Identities = 30/121 (24%), Positives = 55/121 (45%), Gaps = 10/121 (8%)
Query: 195 EESRAFCETLEETNYRLQ-----KELLEKQKE-----MESLKKLLSEKQLHIDTLENRIR 244
EE E + ET LQ K+L+E++K +E ++ L ++ I ++ +
Sbjct: 1511 EEISDLTEQIAETGKNLQEAEKTKKLVEQEKSDLQVALEEVEGSLEHEESKILRVQLELS 1570
Query: 245 TLSLEPEESLDVSETEGEQILKVESSALEVDQDVLDEESRADNKPCLSFSEPENAVSEIE 304
+ E + + + E EQ+ + A E Q VLD E R+ N + E ++E+E
Sbjct: 1571 QVKSELDRKVIEKDEEIEQLKRNSQRAAEALQSVLDAEIRSRNDALRLKKKMEGDLNEME 1630
Query: 305 V 305
+
Sbjct: 1631 I 1631
Score = 30.4 bits (67), Expect = 2.1
Identities = 29/145 (20%), Positives = 60/145 (41%), Gaps = 22/145 (15%)
Query: 192 DSLEESRAFCETLEETNYRLQKELLEKQKEME---------------------SLKKLLS 230
++ E + + C +LE+T RLQ E+ + +++E K+ L
Sbjct: 1406 ENTETANSKCASLEKTKQRLQGEVEDLMRDLERSHTACATLDKKQRNFDKVLAEWKQKLD 1465
Query: 231 EKQLHIDTLENRIRTLSLEPEESLDVSETEGEQILKVESSALEVDQDVLD-EESRADNKP 289
E Q ++ + R+LS E + + E +Q+ + + +++ D E A+
Sbjct: 1466 ESQAELEAAQKESRSLSTELFKMRNAYEEVVDQLETLRRENKNLQEEISDLTEQIAETGK 1525
Query: 290 CLSFSEPENAVSEIEVAEVAYDAEE 314
L +E + E E +++ EE
Sbjct: 1526 NLQEAEKTKKLVEQEKSDLQVALEE 1550
>gi|157311604 phosphodiesterase 4D interacting protein isoform 1 [Homo
sapiens]
Length = 2346
Score = 35.8 bits (81), Expect = 0.051
Identities = 29/118 (24%), Positives = 54/118 (45%), Gaps = 15/118 (12%)
Query: 204 LEETNYRLQKELL----EKQKEMESLKKLLSEKQLHIDTLENRIRTLSLEPEESLDVSET 259
L E N RLQ +L E +E ESL++ L + H+ LE + +E ++ L+
Sbjct: 1907 LREDNRRLQAQLSHVSREHSQETESLREALLSSRSHLQELEKELEHQKVERQQLLEDLRE 1966
Query: 260 EGEQILKVESSALEVDQDVLDEESRADNKPCLSFSEP-------ENAVSEIEVAEVAY 310
+ +++L L + ++ +SR +K L + E+ SE+++ E Y
Sbjct: 1967 KQQEVLHFREERLSLQEN----DSRLQHKLVLLQQQCEEKQQLFESLQSELQIYEALY 2020
Score = 34.7 bits (78), Expect = 0.11
Identities = 24/80 (30%), Positives = 39/80 (48%)
Query: 205 EETNYRLQKELLEKQKEMESLKKLLSEKQLHIDTLENRIRTLSLEPEESLDVSETEGEQI 264
E + + K +E + E+ESLK+ L +K+ H+D + L+ + E L E +Q
Sbjct: 38 EASREDIYKRNIELKVEVESLKRELQDKKQHLDKTWADVENLNSQNEAELRRQFEERQQE 97
Query: 265 LKVESSALEVDQDVLDEESR 284
+ LE +L EESR
Sbjct: 98 TEHVYELLENKIQLLQEESR 117
>gi|41327691 kinesin-like motor protein C20orf23 [Homo sapiens]
Length = 1317
Score = 35.8 bits (81), Expect = 0.051
Identities = 31/118 (26%), Positives = 48/118 (40%), Gaps = 3/118 (2%)
Query: 192 DSLEESRAFCETLEETNYRLQKELLEKQKEMESLKKLLSEKQLHIDTLENRIRTLSLEPE 251
+ LE R E +EE + EL Q+E+E+ +K QL I E ++ S E
Sbjct: 607 EKLESKRKLIEEMEEKQKSDKAELERMQQEVETQRKETEIVQLQIRKQEESLKRRSFHIE 666
Query: 252 ESLDVSETEGEQILKVESSALEVDQDVLDEESRADNKPCLSFSEPENAVSEIEVAEVA 309
L E E K E L Q++ ++ R + + L E + E+ E A
Sbjct: 667 NKLKDLLAEKE---KFEEERLREQQEIELQKKRQEEETFLRVQEELQRLKELNNNEKA 721
Score = 28.9 bits (63), Expect = 6.2
Identities = 22/80 (27%), Positives = 40/80 (50%), Gaps = 5/80 (6%)
Query: 194 LEESRAFCETLEETNYRLQKELLEKQKEMESLKKLLSEKQLHIDTLENRIRTLSLEPEES 253
LEE + E L+ L L + +KEME ++ L++ Q + N+++ L E +
Sbjct: 921 LEEKQRAFEILDRGPLSLDNTLYQVEKEMEEKEEQLAQYQAN----ANQLQKLQATFEFT 976
Query: 254 LDVSETEGEQILKVESSALE 273
+++ E E++ K E LE
Sbjct: 977 ANIARQE-EKVRKKEKEILE 995
>gi|98986453 myosin, heavy chain 3, skeletal muscle, embryonic [Homo
sapiens]
Length = 1940
Score = 35.4 bits (80), Expect = 0.066
Identities = 35/145 (24%), Positives = 61/145 (42%), Gaps = 22/145 (15%)
Query: 192 DSLEESRAFCETLEETNYRLQKELLEKQKEME---SLKKLLSEKQLHIDTLENRIRTLSL 248
+ +E A C +LE+T RLQ E+ + ++E SL L +KQ + D + +T
Sbjct: 1403 EQVEAVNAKCASLEKTKQRLQGEVEDLMVDVERANSLAAALDKKQRNFDKVLAEWKTKCE 1462
Query: 249 EPEESLDVSETEG------------------EQILKVESSALEVDQDVLD-EESRADNKP 289
E + L+ S E +Q+ V+ ++Q++ D E A+N
Sbjct: 1463 ESQAELEASLKESRSLSTELFKLKNAYEEALDQLETVKRENKNLEQEIADLTEQIAENGK 1522
Query: 290 CLSFSEPENAVSEIEVAEVAYDAEE 314
+ E E+E A++ EE
Sbjct: 1523 TIHELEKSRKQIELEKADIQLALEE 1547
Score = 33.1 bits (74), Expect = 0.33
Identities = 26/107 (24%), Positives = 58/107 (54%), Gaps = 10/107 (9%)
Query: 184 LDDPPGPFDSLEESRAFCETLEETNYRLQKELLEKQKEMESLKKLLSEKQLHIDTLENRI 243
+DD +S+ +S+A E + T L+ +L E + + E +++ LSE + T ++R+
Sbjct: 1229 IDDLSSSMESVSKSKANLEKICRT---LEDQLSEARGKNEEIQRSLSE----LTTQKSRL 1281
Query: 244 RTLSLEPEESLDVSETEGEQILKVESSALEVDQDV---LDEESRADN 287
+T + E L+ E+ Q+ + + + + +++ L+EE++A N
Sbjct: 1282 QTEAGELSRQLEEKESIVSQLSRSKQAFTQQTEELKRQLEEENKAKN 1328
Score = 33.1 bits (74), Expect = 0.33
Identities = 72/346 (20%), Positives = 126/346 (36%), Gaps = 81/346 (23%)
Query: 24 NQRSSSFGSVSTSSNSSKGQLEDSNMGNFKQTSVPDQMDNTSSVCSSPLIRTKFTGTASS 83
+Q S S + + + K QLE+ N + ++ + ++ C L+R ++
Sbjct: 1300 SQLSRSKQAFTQQTEELKRQLEEENKA---KNALAHALQSSRHDCD--LLREQYEEEQEG 1354
Query: 84 IEYSTRPRDTEEQNPETVNWEDRPSTPTILGYEVMEERAKFTLKEMFPGFRLALPPKRWF 143
+ R + N E W + T I E +EE K + RL ++
Sbjct: 1355 --KAELQRALSKANSEVAQWRTKYETDAIQRTEELEEAKKKLAQ------RLQDSEEQVE 1406
Query: 144 KDNYNADFLEDRQLGLQAFLQNLVAHKDIANCLAVREFLCLDDPPGPFD----------- 192
N LE + LQ +++L+ + AN LA LD FD
Sbjct: 1407 AVNAKCASLEKTKQRLQGEVEDLMVDVERANSLAA----ALDKKQRNFDKVLAEWKTKCE 1462
Query: 193 --------SLEESRAFC-----------------ETLEETNYRLQKEL------------ 215
SL+ESR+ ET++ N L++E+
Sbjct: 1463 ESQAELEASLKESRSLSTELFKLKNAYEEALDQLETVKRENKNLEQEIADLTEQIAENGK 1522
Query: 216 ----LEKQKEMESLKK-----LLSEKQLHIDTLENRIRTLSL-------EPEESLDVSET 259
LEK ++ L+K L E + ++ E +I + L E + + +
Sbjct: 1523 TIHELEKSRKQIELEKADIQLALEEAEAALEHEEAKILRIQLELTQVKSEIDRKIAEKDE 1582
Query: 260 EGEQILKVESSALEVDQDVLDEESRADNKPCLSFSEPENAVSEIEV 305
E EQ+ + +E Q LD E R+ N+ + E ++EIE+
Sbjct: 1583 EIEQLKRNYQRTVETMQSALDAEVRSRNEAIRLKKKMEGDLNEIEI 1628
>gi|195947369 junction-mediating and regulatory protein [Homo
sapiens]
Length = 988
Score = 35.4 bits (80), Expect = 0.066
Identities = 47/204 (23%), Positives = 89/204 (43%), Gaps = 23/204 (11%)
Query: 90 PRDTEEQNPETVNWEDRPSTPTILGYEVMEERAKFTLKEMFPGF-RLALPPKRWFKDNYN 148
PR E E +W+ + + ++ + + T K + R+ K++ K ++
Sbjct: 412 PRRIESLQKEDADWQRKAHMAVLSIQDLTVKYFEITAKAQKAVYDRMRADQKKFGKASWA 471
Query: 149 A--DFLEDRQLGLQAFLQNLVAHKDIANCLAVREFLCLDDPPGPFDSLEESRAFCETLEE 206
A + +E Q + ++ K+I CL R+ L + E+ A + LE
Sbjct: 472 AAAERMEKLQYAVSKETLQMMRAKEI--CLEQRKH-ALKEEMQSLRGGTEAIARLDQLEA 528
Query: 207 TNYRLQKELLEKQKE------------MESLKKLLSEKQ---LHIDTLENRIRTLSLEPE 251
Y LQ +L E Q E +ES+K+L+SEK+ ++ DT E+ LE E
Sbjct: 529 DYYDLQLQLYEVQFEILKCEELLLTAQLESIKRLISEKRDEVVYYDTYES--MEAMLEKE 586
Query: 252 ESLDVSETEGEQILKVESSALEVD 275
E + + E++ K++ A +++
Sbjct: 587 EMAASAYLQREELQKLQQKARQLE 610
Score = 33.5 bits (75), Expect = 0.25
Identities = 22/52 (42%), Positives = 30/52 (57%), Gaps = 3/52 (5%)
Query: 185 DDPPGPFDSLEESR--AFCETLEETNYRLQKELLEKQKEMESLKKLLSEKQL 234
DDP ++SL E R + E L+ R+Q ELL+K K ES+ +LL QL
Sbjct: 314 DDPEEYYESLSELRQKGYEEVLQRARKRIQ-ELLDKHKNTESMVELLDLYQL 364
>gi|42740899 CTAGE family, member 5 isoform 3 [Homo sapiens]
Length = 761
Score = 35.4 bits (80), Expect = 0.066
Identities = 31/120 (25%), Positives = 53/120 (44%), Gaps = 8/120 (6%)
Query: 199 AFCETLEETNYRLQKELLEKQKEMESLKKLLSEKQLHIDTLENRIRTLSLEPEESLDVSE 258
A CE L +N L+ E+L +KE++ K SE+ + + RI++L + +SL
Sbjct: 129 ATCEKLNRSNSELEDEILCLEKELKEEKSKHSEQDELMADISKRIQSLE-DESKSLKSQV 187
Query: 259 TEGEQILKV----ESSALEVDQDVLDEESRADNKPCLSFSEPE---NAVSEIEVAEVAYD 311
E + K+ E +D L+E S+ E E VSE+ +V ++
Sbjct: 188 AEAKMTFKIFQMNEERLKIAIKDALNENSQLQESQKQLLQEAEVWKEQVSELNKQKVTFE 247
>gi|42740897 CTAGE family, member 5 isoform 1 [Homo sapiens]
Length = 804
Score = 35.4 bits (80), Expect = 0.066
Identities = 31/120 (25%), Positives = 53/120 (44%), Gaps = 8/120 (6%)
Query: 199 AFCETLEETNYRLQKELLEKQKEMESLKKLLSEKQLHIDTLENRIRTLSLEPEESLDVSE 258
A CE L +N L+ E+L +KE++ K SE+ + + RI++L + +SL
Sbjct: 129 ATCEKLNRSNSELEDEILCLEKELKEEKSKHSEQDELMADISKRIQSLE-DESKSLKSQV 187
Query: 259 TEGEQILKV----ESSALEVDQDVLDEESRADNKPCLSFSEPE---NAVSEIEVAEVAYD 311
E + K+ E +D L+E S+ E E VSE+ +V ++
Sbjct: 188 AEAKMTFKIFQMNEERLKIAIKDALNENSQLQESQKQLLQEAEVWKEQVSELNKQKVTFE 247
>gi|42740901 CTAGE family, member 5 isoform 4 [Homo sapiens]
Length = 775
Score = 35.4 bits (80), Expect = 0.066
Identities = 31/120 (25%), Positives = 53/120 (44%), Gaps = 8/120 (6%)
Query: 199 AFCETLEETNYRLQKELLEKQKEMESLKKLLSEKQLHIDTLENRIRTLSLEPEESLDVSE 258
A CE L +N L+ E+L +KE++ K SE+ + + RI++L + +SL
Sbjct: 100 ATCEKLNRSNSELEDEILCLEKELKEEKSKHSEQDELMADISKRIQSLE-DESKSLKSQV 158
Query: 259 TEGEQILKV----ESSALEVDQDVLDEESRADNKPCLSFSEPE---NAVSEIEVAEVAYD 311
E + K+ E +D L+E S+ E E VSE+ +V ++
Sbjct: 159 AEAKMTFKIFQMNEERLKIAIKDALNENSQLQESQKQLLQEAEVWKEQVSELNKQKVTFE 218
>gi|42740905 CTAGE family, member 5 isoform 2 [Homo sapiens]
Length = 792
Score = 35.4 bits (80), Expect = 0.066
Identities = 31/120 (25%), Positives = 53/120 (44%), Gaps = 8/120 (6%)
Query: 199 AFCETLEETNYRLQKELLEKQKEMESLKKLLSEKQLHIDTLENRIRTLSLEPEESLDVSE 258
A CE L +N L+ E+L +KE++ K SE+ + + RI++L + +SL
Sbjct: 117 ATCEKLNRSNSELEDEILCLEKELKEEKSKHSEQDELMADISKRIQSLE-DESKSLKSQV 175
Query: 259 TEGEQILKV----ESSALEVDQDVLDEESRADNKPCLSFSEPE---NAVSEIEVAEVAYD 311
E + K+ E +D L+E S+ E E VSE+ +V ++
Sbjct: 176 AEAKMTFKIFQMNEERLKIAIKDALNENSQLQESQKQLLQEAEVWKEQVSELNKQKVTFE 235
Database: hs.faa
Posted date: Aug 4, 2009 4:42 PM
Number of letters in database: 18,247,518
Number of sequences in database: 37,866
Lambda K H
0.309 0.127 0.353
Gapped
Lambda K H
0.267 0.0410 0.140
Matrix: BLOSUM62
Gap Penalties: Existence: 11, Extension: 1
Number of Hits to DB: 12,365,588
Number of Sequences: 37866
Number of extensions: 554717
Number of successful extensions: 3604
Number of sequences better than 10.0: 30
Number of HSP's better than 10.0 without gapping: 108
Number of HSP's successfully gapped in prelim test: 254
Number of HSP's that attempted gapping in prelim test: 2906
Number of HSP's gapped (non-prelim): 924
length of query: 315
length of database: 18,247,518
effective HSP length: 102
effective length of query: 213
effective length of database: 14,385,186
effective search space: 3064044618
effective search space used: 3064044618
T: 11
A: 40
X1: 16 ( 7.1 bits)
X2: 38 (14.6 bits)
X3: 64 (24.7 bits)
S1: 42 (21.7 bits)
S2: 62 (28.5 bits)
Search results were obtained with NCBI BLAST and RefSeq entries.
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Guide to the Human Genome
Copyright © 2010 by Stewart Scherer. All rights reserved.