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Search of human proteins with 23111007
BLASTP 2.2.11 [Jun-05-2005]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= gi|23111007 hypothetical protein LOC79018 [Homo sapiens]
(300 letters)
Database: hs.faa
37,866 sequences; 18,247,518 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
gi|23111007 hypothetical protein LOC79018 [Homo sapiens] 629 0.0
gi|223972704 hypothetical protein LOC284418 [Homo sapiens] 43 3e-04
gi|148727370 immediate early response 5-like [Homo sapiens] 43 3e-04
gi|18079216 CASK interacting protein 1 [Homo sapiens] 41 0.001
gi|13273315 homeobox B4 [Homo sapiens] 40 0.003
gi|39812378 RAN binding protein 9 [Homo sapiens] 40 0.003
gi|37537692 proline-rich protein BstNI subfamily 4 precursor [Ho... 40 0.003
gi|4507909 Wiskott-Aldrich syndrome protein [Homo sapiens] 39 0.004
gi|239745773 PREDICTED: hypothetical protein XP_002343550 [Homo ... 39 0.004
gi|239745771 PREDICTED: hypothetical protein XP_002343549 [Homo ... 39 0.004
gi|239745769 PREDICTED: hypothetical protein XP_002343548 [Homo ... 39 0.004
gi|153792074 proline rich 12 [Homo sapiens] 39 0.006
gi|239753839 PREDICTED: hypothetical protein [Homo sapiens] 39 0.007
gi|239740773 PREDICTED: similar to diffuse panbronchiolitis crit... 39 0.007
gi|169658378 trinucleotide repeat containing 18 [Homo sapiens] 39 0.007
gi|149999378 inverted formin 2 isoform 2 [Homo sapiens] 39 0.007
gi|149999380 inverted formin 2 isoform 1 [Homo sapiens] 39 0.007
gi|11415052 retinoid X receptor, beta [Homo sapiens] 38 0.010
gi|61743942 abl-interactor 1 isoform a [Homo sapiens] 38 0.010
gi|239757409 PREDICTED: similar to zinc finger protein 208 [Homo... 38 0.012
gi|239755509 PREDICTED: hypothetical protein [Homo sapiens] 38 0.012
gi|239750019 PREDICTED: hypothetical protein [Homo sapiens] 38 0.012
gi|239749695 PREDICTED: hypothetical protein XP_002347121 [Homo ... 38 0.012
gi|239746371 PREDICTED: similar to zinc finger protein 208 [Homo... 38 0.012
gi|239744332 PREDICTED: hypothetical protein XP_002343119 [Homo ... 38 0.012
gi|239743961 PREDICTED: hypothetical protein XP_002344246 [Homo ... 38 0.012
gi|117553586 dedicator of cytokinesis 5 [Homo sapiens] 38 0.012
gi|39930517 sterile alpha motif domain containing 1 [Homo sapiens] 38 0.012
gi|7662228 synaptosomal-associated protein, 91kDa homolog [Homo ... 37 0.016
gi|51702526 Wiskott-Aldrich syndrome gene-like protein [Homo sap... 37 0.016
>gi|23111007 hypothetical protein LOC79018 [Homo sapiens]
Length = 300
Score = 629 bits (1623), Expect = 0.0
Identities = 300/300 (100%), Positives = 300/300 (100%)
Query: 1 MCARGQVGRGTQLRTGRPCSQVPGSRWRPERLLRRQRAGGRPSRPHPARARPGLSLPATL 60
MCARGQVGRGTQLRTGRPCSQVPGSRWRPERLLRRQRAGGRPSRPHPARARPGLSLPATL
Sbjct: 1 MCARGQVGRGTQLRTGRPCSQVPGSRWRPERLLRRQRAGGRPSRPHPARARPGLSLPATL 60
Query: 61 LGSRAAAAVPLPLPPALAPGDPAMPVRTECPPPAGASAASAASLIPPPPINTQQPGVATS 120
LGSRAAAAVPLPLPPALAPGDPAMPVRTECPPPAGASAASAASLIPPPPINTQQPGVATS
Sbjct: 61 LGSRAAAAVPLPLPPALAPGDPAMPVRTECPPPAGASAASAASLIPPPPINTQQPGVATS 120
Query: 121 LLYSGSKFRGHQKSKGNSYDVEVVLQHVDTGNSYLCGYLKIKGLTEEYPTLTTFFEGEII 180
LLYSGSKFRGHQKSKGNSYDVEVVLQHVDTGNSYLCGYLKIKGLTEEYPTLTTFFEGEII
Sbjct: 121 LLYSGSKFRGHQKSKGNSYDVEVVLQHVDTGNSYLCGYLKIKGLTEEYPTLTTFFEGEII 180
Query: 181 SKKHPFLTRKWDADEDVDRKHWGKFLAFYQYAKSFNSDDFDYEELKNGDYVFMRWKEQFL 240
SKKHPFLTRKWDADEDVDRKHWGKFLAFYQYAKSFNSDDFDYEELKNGDYVFMRWKEQFL
Sbjct: 181 SKKHPFLTRKWDADEDVDRKHWGKFLAFYQYAKSFNSDDFDYEELKNGDYVFMRWKEQFL 240
Query: 241 VPDHTIKDISGASFAGFYYICFQKSAASIEGYYYHRSSEWYQSLNLTHVPEHSAPIYEFR 300
VPDHTIKDISGASFAGFYYICFQKSAASIEGYYYHRSSEWYQSLNLTHVPEHSAPIYEFR
Sbjct: 241 VPDHTIKDISGASFAGFYYICFQKSAASIEGYYYHRSSEWYQSLNLTHVPEHSAPIYEFR 300
>gi|223972704 hypothetical protein LOC284418 [Homo sapiens]
Length = 922
Score = 43.1 bits (100), Expect = 3e-04
Identities = 36/98 (36%), Positives = 42/98 (42%), Gaps = 21/98 (21%)
Query: 22 VPGSRWRPERLLRRQRAGGRPSRPHPARARPGLSLPATLLGSRAAAAVPLPLPPALAPGD 81
VP S W+P G P + PA + P PA S+ A AVP P A
Sbjct: 425 VPASSWKPP-------PGLAPPQKAPAASAPPRKAPAVPAPSQKAPAVPAPSQKA----- 472
Query: 82 PAMPVRTECPPPAGASAASA----ASLIPPPPINTQQP 115
PA+P P ASAASA AS +P PP T P
Sbjct: 473 PAIPA-----PSRKASAASASPRKASAVPAPPQKTPPP 505
Score = 30.0 bits (66), Expect = 2.6
Identities = 22/74 (29%), Positives = 26/74 (35%)
Query: 42 PSRPHPARARPGLSLPATLLGSRAAAAVPLPLPPALAPGDPAMPVRTECPPPAGASAASA 101
PS+ PA P A R A+AVP P P A V T +A
Sbjct: 468 PSQKAPAIPAPSRKASAASASPRKASAVPAPPQKTPPPSQKAPSVPTIPQKAVSPTAPKK 527
Query: 102 ASLIPPPPINTQQP 115
SL+ P P P
Sbjct: 528 KSLLLPAPSQKALP 541
>gi|148727370 immediate early response 5-like [Homo sapiens]
Length = 404
Score = 43.1 bits (100), Expect = 3e-04
Identities = 31/90 (34%), Positives = 41/90 (45%), Gaps = 7/90 (7%)
Query: 67 AAVPLPLPP----ALAPGDPAMPVRTECPPPAGASAASAASLIPPPPINTQQPGVATSLL 122
A +PLPLPP AL P DP P C P GA+ +AA+ P P PG
Sbjct: 183 APLPLPLPPPAPAALCPRDPRAP--AACSAPPGAAPPAAAASPPASPAPASSPGFYRGAY 240
Query: 123 YSGSKFRGHQKSKGNSYDVEV-VLQHVDTG 151
+ S F H S+ D++ V+ V+ G
Sbjct: 241 PTPSDFGLHCSSQTTVLDLDTHVVTTVENG 270
>gi|18079216 CASK interacting protein 1 [Homo sapiens]
Length = 1431
Score = 40.8 bits (94), Expect = 0.001
Identities = 31/91 (34%), Positives = 41/91 (45%), Gaps = 18/91 (19%)
Query: 42 PSRPHPARARPGLS--------LPATLLGSRAAAAVPLPLPPAL--------APGDPAMP 85
P+ P P +A GL P+ AA A P PP+L +PG PA+
Sbjct: 1278 PTAPKPVKAVAGLPSGSAGPSPAPSPARQPPAALAKPPGTPPSLGASPAKPPSPGAPALH 1337
Query: 86 VRTECPPPAGASAASAASLIPPPPINTQQPG 116
V + PP A+AA+AA+ PP P PG
Sbjct: 1338 VPAK--PPRAAAAAAAAAAAPPAPPEGASPG 1366
Score = 35.8 bits (81), Expect = 0.047
Identities = 28/87 (32%), Positives = 38/87 (43%), Gaps = 13/87 (14%)
Query: 41 RPSRPHPARARPGLSLPATLL-GSRAAAAVPLPLPPALAPGDPAMPVRTECPPPAGASAA 99
+P++P P +P L+ P L GS + +PLP PG P + PPP
Sbjct: 1220 KPAKP-PVSPKPVLTQPVPKLQGSPTPTSKKVPLP---GPGSPEVKRAHGTPPPVSPK-- 1273
Query: 100 SAASLIPPPPINTQQPGVATSLLYSGS 126
PPPP +P A + L SGS
Sbjct: 1274 ------PPPPPTAPKPVKAVAGLPSGS 1294
Score = 30.0 bits (66), Expect = 2.6
Identities = 29/91 (31%), Positives = 38/91 (41%), Gaps = 17/91 (18%)
Query: 34 RRQRAGGRPSRPHPARARPGLSLPATLLGS-----RAAAAVPLPLPPALAPGDPAMPVRT 88
RR +A R + P P P LS+ G+ + A P LPP P PA P T
Sbjct: 1150 RRPKAKEREAGPEPP---PPLSVYHNGTGTVRRRPASEQAGPPELPP---PPPPAEPPPT 1203
Query: 89 EC------PPPAGASAASAASLIPPPPINTQ 113
+ PPP G + A + P P+ TQ
Sbjct: 1204 DLAHLPPLPPPEGEARKPAKPPVSPKPVLTQ 1234
Score = 28.9 bits (63), Expect = 5.8
Identities = 21/64 (32%), Positives = 27/64 (42%), Gaps = 16/64 (25%)
Query: 39 GGRPSRPHPARARPGLSLPATLLGSRAAAAVPLPLPPALAPGDPAMPVRTECPPPAGASA 98
G P++P P+ P L +PA + AAAA PPA PP GAS
Sbjct: 1322 GASPAKP-PSPGAPALHVPAKPPRAAAAAAAAAAAPPA---------------PPEGASP 1365
Query: 99 ASAA 102
+A
Sbjct: 1366 GDSA 1369
>gi|13273315 homeobox B4 [Homo sapiens]
Length = 251
Score = 40.0 bits (92), Expect = 0.003
Identities = 34/109 (31%), Positives = 39/109 (35%), Gaps = 12/109 (11%)
Query: 18 PCSQVPGSRWRPERLLRRQRAGGRPSRPHPARARPGLSLPATLLGSRAAAA-----VPLP 72
PC + S + P AGG+ R + G A R AA P P
Sbjct: 19 PCEEYSQSDYLPSDHSPGYYAGGQ-RRESSFQPEAGFGRRAACTVQRYAACRDPGPPPPP 77
Query: 73 LPPALAPGDPAMPVRTECPPPAGA------SAASAASLIPPPPINTQQP 115
PP P P + R PPPAGA A S PPPP Q P
Sbjct: 78 PPPPPPPPPPGLSPRAPAPPPAGALLPEPGQRCEAVSSSPPPPPCAQNP 126
>gi|39812378 RAN binding protein 9 [Homo sapiens]
Length = 729
Score = 39.7 bits (91), Expect = 0.003
Identities = 34/82 (41%), Positives = 38/82 (46%), Gaps = 12/82 (14%)
Query: 52 PGLSLPATLLGSRAAAAV---PLPLPPALAPGDPAMPVRTECPPPAGASAASAASLIPPP 108
PG LG+ AAA + P P PPA A P P PPP ASAA+ AS P P
Sbjct: 51 PGGGAGGEGLGAAAAALLLHPPPPPPPATAAPPPPPP-----PPPPPASAAAPASGPPAP 105
Query: 109 PINTQQPGVA----TSLLYSGS 126
P PG A T L +GS
Sbjct: 106 PGLAAGPGPAGGAPTPALVAGS 127
>gi|37537692 proline-rich protein BstNI subfamily 4 precursor [Homo
sapiens]
Length = 247
Score = 39.7 bits (91), Expect = 0.003
Identities = 27/90 (30%), Positives = 38/90 (42%), Gaps = 13/90 (14%)
Query: 34 RRQRAGGRPSRPHPARARPGLSLPATLLGSRAAAAVPLPLPPALAP--------GDPAMP 85
RR + G +P RP P +P P G+++ P P P P G P P
Sbjct: 39 RRPQGGNQPQRPPPPPGKP--QGPPPQGGNQSQGPPPPPGKPEGRPPQGGNQSQGPPPHP 96
Query: 86 VRTECPPPAGASAASAASLIPPPPINTQQP 115
+ E PPP G + + PPPP ++P
Sbjct: 97 GKPERPPPQGGNQSQGT---PPPPGKPERP 123
Score = 28.5 bits (62), Expect = 7.6
Identities = 30/112 (26%), Positives = 40/112 (35%), Gaps = 14/112 (12%)
Query: 16 GRPCSQVPGSRWRPERLLRRQRAGGRPSRPHPARARPGLSLPATLLGSRAAAAVP----- 70
G + P +PER + G + P P +P P SR+A + P
Sbjct: 128 GNQSHRPPPPPGKPER--PPPQGGNQSQGPPPHPGKPEGPPPQEGNKSRSARSPPGKPQG 185
Query: 71 LPLPPALAPGDPAMPVRTECPPPAG-------ASAASAASLIPPPPINTQQP 115
P P P P + + PPPAG A A PPPP + P
Sbjct: 186 PPQQEGNKPQGPPPPGKPQGPPPAGGNPQQPQAPPAGKPQGPPPPPQGGRPP 237
>gi|4507909 Wiskott-Aldrich syndrome protein [Homo sapiens]
Length = 502
Score = 39.3 bits (90), Expect = 0.004
Identities = 26/84 (30%), Positives = 35/84 (41%), Gaps = 7/84 (8%)
Query: 33 LRRQRAGGRPSRPHPARARPGLSLPAT-LLGSRAAAAVPLP------LPPALAPGDPAMP 85
+R++ P P P +R G LP ++G + PLP PP P P P
Sbjct: 303 VRQEMRRQEPLPPPPPPSRGGNQLPRPPIVGGNKGRSGPLPPVPLGIAPPPPTPRGPPPP 362
Query: 86 VRTECPPPAGASAASAASLIPPPP 109
R PPP + + L PPPP
Sbjct: 363 GRGGPPPPPPPATGRSGPLPPPPP 386
Score = 34.7 bits (78), Expect = 0.11
Identities = 23/69 (33%), Positives = 25/69 (36%), Gaps = 16/69 (23%)
Query: 39 GGRPSRPHPARARPGLSLPATLLGSRAAAAVPLPLPPALAPGDPAMPVRTECPPPAGASA 98
GG P P PA R G PLP PP A G P P PPP +
Sbjct: 365 GGPPPPPPPATGRSG----------------PLPPPPPGAGGPPMPPPPPPPPPPPSSGN 408
Query: 99 ASAASLIPP 107
A +PP
Sbjct: 409 GPAPPPLPP 417
>gi|239745773 PREDICTED: hypothetical protein XP_002343550 [Homo
sapiens]
Length = 323
Score = 39.3 bits (90), Expect = 0.004
Identities = 43/154 (27%), Positives = 57/154 (37%), Gaps = 22/154 (14%)
Query: 6 QVGRGTQLRTGRPCSQVPGSRWRPERLLRRQRAGGRPSRPHPARARPGLSLPATLLGSRA 65
+VG G R G V WR R RR GR S P +S+ + SRA
Sbjct: 157 RVGAGAGWRGGPGLGPVRPPGWRAGRRTRRTAGPGRLSFGKTLAVPPLVSVDPAVAFSRA 216
Query: 66 AAAVPLPLPPAL--APGDPAMPVRTECPPPAGASAASAASLIP---------PPPINTQQ 114
A P P+ PA+ G P+ P P ++A L P PPP +
Sbjct: 217 ADLCP-PVAPAVLEQKGPPSSRTEPRAPSPMEQASAGVPRLRPGRRALWHLFPPPRVPVR 275
Query: 115 PG----------VATSLLYSGSKFRGHQKSKGNS 138
PG + S SG FRG ++ G +
Sbjct: 276 PGRDWLGNRGRKRSQSSKESGQLFRGSLQTPGQA 309
>gi|239745771 PREDICTED: hypothetical protein XP_002343549 [Homo
sapiens]
Length = 323
Score = 39.3 bits (90), Expect = 0.004
Identities = 43/154 (27%), Positives = 57/154 (37%), Gaps = 22/154 (14%)
Query: 6 QVGRGTQLRTGRPCSQVPGSRWRPERLLRRQRAGGRPSRPHPARARPGLSLPATLLGSRA 65
+VG G R G V WR R RR GR S P +S+ + SRA
Sbjct: 157 RVGAGAGWRGGPGLGPVRPPGWRAGRRTRRTAGPGRLSFGKTLAVPPLVSVDPAVAFSRA 216
Query: 66 AAAVPLPLPPAL--APGDPAMPVRTECPPPAGASAASAASLIP---------PPPINTQQ 114
A P P+ PA+ G P+ P P ++A L P PPP +
Sbjct: 217 ADLCP-PVAPAVLEQKGPPSSRTEPRAPSPMEQASAGVPRLRPGRRALWHLFPPPRVPVR 275
Query: 115 PG----------VATSLLYSGSKFRGHQKSKGNS 138
PG + S SG FRG ++ G +
Sbjct: 276 PGRDWLGNRGRKRSQSSKESGQLFRGSLQTPGQA 309
>gi|239745769 PREDICTED: hypothetical protein XP_002343548 [Homo
sapiens]
Length = 323
Score = 39.3 bits (90), Expect = 0.004
Identities = 43/154 (27%), Positives = 57/154 (37%), Gaps = 22/154 (14%)
Query: 6 QVGRGTQLRTGRPCSQVPGSRWRPERLLRRQRAGGRPSRPHPARARPGLSLPATLLGSRA 65
+VG G R G V WR R RR GR S P +S+ + SRA
Sbjct: 157 RVGAGAGWRGGPGLGPVRPPGWRAGRRTRRTAGPGRLSFGKTLAVPPLVSVDPAVAFSRA 216
Query: 66 AAAVPLPLPPAL--APGDPAMPVRTECPPPAGASAASAASLIP---------PPPINTQQ 114
A P P+ PA+ G P+ P P ++A L P PPP +
Sbjct: 217 ADLCP-PVAPAVLEQKGPPSSRTEPRAPSPMEQASAGVPRLRPGRRALWHLFPPPRVPVR 275
Query: 115 PG----------VATSLLYSGSKFRGHQKSKGNS 138
PG + S SG FRG ++ G +
Sbjct: 276 PGRDWLGNRGRKRSQSSKESGQLFRGSLQTPGQA 309
>gi|153792074 proline rich 12 [Homo sapiens]
Length = 2036
Score = 38.9 bits (89), Expect = 0.006
Identities = 26/72 (36%), Positives = 32/72 (44%), Gaps = 4/72 (5%)
Query: 45 PHPARARPGLSLPATLLGSRAAAAVPLPLPPALAPGDPAMPVRTECPPPAGAS-AASAAS 103
P P +P L P L+ ++ P PLPP P PAMP PPPA A AA
Sbjct: 1473 PPPPPPQPALPSPPPLVAPTPSSPPPPPLPP---PPPPAMPSPPPPPPPAAAPLAAPPEE 1529
Query: 104 LIPPPPINTQQP 115
P P + + P
Sbjct: 1530 PAAPSPEDPELP 1541
Score = 34.3 bits (77), Expect = 0.14
Identities = 21/49 (42%), Positives = 24/49 (48%), Gaps = 5/49 (10%)
Query: 66 AAAVPLP-----LPPALAPGDPAMPVRTECPPPAGASAASAASLIPPPP 109
AAAVP P LP A + G P P+ E PPP A + PPPP
Sbjct: 1427 AAAVPGPPPLPGLPSANSNGTPEPPLLEEKPPPTPPPAPTPQPQPPPPP 1475
Score = 29.3 bits (64), Expect = 4.4
Identities = 25/92 (27%), Positives = 30/92 (32%), Gaps = 2/92 (2%)
Query: 18 PCSQVPGSRWRPERLLRRQRAGGRPSRPHPARARPGLSLPATLLGSRAAAAVPLPLPPAL 77
P + VPG P L + G P P P PA + P P P
Sbjct: 1426 PAAAVPGPPPLPG--LPSANSNGTPEPPLLEEKPPPTPPPAPTPQPQPPPPPPPPQPALP 1483
Query: 78 APGDPAMPVRTECPPPAGASAASAASLIPPPP 109
+P P + PPP A PPPP
Sbjct: 1484 SPPPLVAPTPSSPPPPPLPPPPPPAMPSPPPP 1515
>gi|239753839 PREDICTED: hypothetical protein [Homo sapiens]
Length = 257
Score = 38.5 bits (88), Expect = 0.007
Identities = 39/118 (33%), Positives = 48/118 (40%), Gaps = 9/118 (7%)
Query: 3 ARGQVGRGTQLRTGRPCSQVPGSRWRPERLLRRQRAGGRPSRPHPARARPG-LSLPATLL 61
ARG G + G + G+R P R L G A RPG +LP +
Sbjct: 125 ARGSPA-GVERAGGATAASSAGTRSVPARRLPPPCGGTSLGAGSRALRRPGSAALPRSPS 183
Query: 62 GSRAAAAVPLP-LPPALAPGDPAMPVRTECPPPAGASAASAASLIPPPPINTQQPGVA 118
SR AA+P P P APG + PP A+AAS+ PPPP P A
Sbjct: 184 SSRRWAAMPGPGAPRPGAPGTWPVGFAVAAPP------AAAASVAPPPPAVAGAPAAA 235
Score = 29.3 bits (64), Expect = 4.4
Identities = 22/78 (28%), Positives = 27/78 (34%)
Query: 10 GTQLRTGRPCSQVPGSRWRPERLLRRQRAGGRPSRPHPARARPGLSLPATLLGSRAAAAV 69
GT L G + PGS P +R P P PG + + AAA
Sbjct: 160 GTSLGAGSRALRRPGSAALPRSPSSSRRWAAMPGPGAPRPGAPGTWPVGFAVAAPPAAAA 219
Query: 70 PLPLPPALAPGDPAMPVR 87
+ PP G PA R
Sbjct: 220 SVAPPPPAVAGAPAAAFR 237
>gi|239740773 PREDICTED: similar to diffuse panbronchiolitis critical
region 1 [Homo sapiens]
Length = 1400
Score = 38.5 bits (88), Expect = 0.007
Identities = 33/135 (24%), Positives = 49/135 (36%), Gaps = 4/135 (2%)
Query: 55 SLPATLLGSRAAAAVPLPLPPALAPGDPAMPVRTECPPPAGASAASAASLIPPPPINTQQ 114
SLP T+ + + +P A + T+ +G + SA S PP P T
Sbjct: 1173 SLPTTVFTTTSKITAGSEIPTASTTDSATTAISTKA---SGTTVESAPSTAPPTPAETTT 1229
Query: 115 PGVATSLLYSGSKFRGHQKSKGNSYDVEVVLQHVDTGNSYLCGYLKIKGLTEEYPT-LTT 173
V T+ +GS+ GH V TG+ +T T +TT
Sbjct: 1230 ASVPTTTSTTGSENTGHHTVSSVPTTVFATASESSTGSETTRASTSATEVTTAMTTAMTT 1289
Query: 174 FFEGEIISKKHPFLT 188
E ++S K P T
Sbjct: 1290 GSETAVVSTKAPVTT 1304
>gi|169658378 trinucleotide repeat containing 18 [Homo sapiens]
Length = 2968
Score = 38.5 bits (88), Expect = 0.007
Identities = 42/151 (27%), Positives = 56/151 (37%), Gaps = 28/151 (18%)
Query: 3 ARGQVGRGTQLRTGRPCSQVPGSRWRPERLLRRQRAGGRPSRPHPARARPGLSLPATLLG 62
A+ + R L G P +VP + P L G + S P P R
Sbjct: 2338 AKAKGDRAATLEEGNPTDEVPST---PLALEPSSTPGSKKSPPEPVDKR----------- 2383
Query: 63 SRAAAAVPLPLPPALAPGDPAMPVRTECPPPA--GASAASAASLIPPP----PINTQQPG 116
++A A P P P+ PA P T CP P A A SL P P P +P
Sbjct: 2384 AKAPKARPAPPQPS-----PAPPAFTSCPAPEPFAELPAPATSLAPAPLITMPATRPKPK 2438
Query: 117 VATSLLYSGSKFRGHQKSKGNSYDVEVVLQH 147
A + SG+K + G ++ V L H
Sbjct: 2439 KARAAEESGAK---GPRRPGEEAELLVKLDH 2466
Score = 28.5 bits (62), Expect = 7.6
Identities = 23/59 (38%), Positives = 23/59 (38%), Gaps = 7/59 (11%)
Query: 40 GRPSRPHPARARPGLSL---PATLLGSRAAAAVPLPLPPALAPGDPAMPVRTECPPPAG 95
GR AR G L TLL PLP PPA G PA P T PAG
Sbjct: 301 GRGGAKEAARQDEGARLLRRTETLLPGPRPCPSPLPPPPAPPKGPPAPPAAT----PAG 355
>gi|149999378 inverted formin 2 isoform 2 [Homo sapiens]
Length = 1240
Score = 38.5 bits (88), Expect = 0.007
Identities = 19/44 (43%), Positives = 21/44 (47%)
Query: 66 AAAVPLPLPPALAPGDPAMPVRTECPPPAGASAASAASLIPPPP 109
A+ P P PP L PG A P PPP + A A PPPP
Sbjct: 418 ASTPPPPPPPPLLPGSSAEPPPPPPPPPLPSVGAKALPTAPPPP 461
Score = 34.3 bits (77), Expect = 0.14
Identities = 29/84 (34%), Positives = 34/84 (40%), Gaps = 9/84 (10%)
Query: 31 RLLRRQRAGGRPSRPHP----ARARPGLSLPATLLGSRAAAAVPLPLPPALAPGDPAM-P 85
R L +Q + P P P + A P P L S A A+P PP PG AM P
Sbjct: 412 RALEQQASTPPPPPPPPLLPGSSAEPPPPPPPPPLPSVGAKALPTAPPPPPLPGLGAMAP 471
Query: 86 VRTECPPPAGASAASAASLIPPPP 109
PPP S +PPPP
Sbjct: 472 PAPPLPPPLPGS----CEFLPPPP 491
>gi|149999380 inverted formin 2 isoform 1 [Homo sapiens]
Length = 1249
Score = 38.5 bits (88), Expect = 0.007
Identities = 19/44 (43%), Positives = 21/44 (47%)
Query: 66 AAAVPLPLPPALAPGDPAMPVRTECPPPAGASAASAASLIPPPP 109
A+ P P PP L PG A P PPP + A A PPPP
Sbjct: 418 ASTPPPPPPPPLLPGSSAEPPPPPPPPPLPSVGAKALPTAPPPP 461
Score = 34.3 bits (77), Expect = 0.14
Identities = 29/84 (34%), Positives = 34/84 (40%), Gaps = 9/84 (10%)
Query: 31 RLLRRQRAGGRPSRPHP----ARARPGLSLPATLLGSRAAAAVPLPLPPALAPGDPAM-P 85
R L +Q + P P P + A P P L S A A+P PP PG AM P
Sbjct: 412 RALEQQASTPPPPPPPPLLPGSSAEPPPPPPPPPLPSVGAKALPTAPPPPPLPGLGAMAP 471
Query: 86 VRTECPPPAGASAASAASLIPPPP 109
PPP S +PPPP
Sbjct: 472 PAPPLPPPLPGS----CEFLPPPP 491
>gi|11415052 retinoid X receptor, beta [Homo sapiens]
Length = 533
Score = 38.1 bits (87), Expect = 0.010
Identities = 30/107 (28%), Positives = 44/107 (41%), Gaps = 10/107 (9%)
Query: 25 SRWR-------PERLLRRQRAGGRPSRPHPARARPGLS-LPATLLGSRAA-AAVPLPLPP 75
SRWR P AGG P P G + + SR+ ++ P PLP
Sbjct: 34 SRWRRRRPWLDPAAAAAAAVAGGEQQTPEPEPGEAGRDGMGDSGRDSRSPDSSSPNPLPQ 93
Query: 76 ALAP-GDPAMPVRTECPPPAGASAASAASLIPPPPINTQQPGVATSL 121
+ P P P+ P G S A +PPPP+ + P +++S+
Sbjct: 94 GVPPPSPPGPPLPPSTAPSLGGSGAPPPPPMPPPPLGSPFPVISSSM 140
>gi|61743942 abl-interactor 1 isoform a [Homo sapiens]
Length = 508
Score = 38.1 bits (87), Expect = 0.010
Identities = 38/132 (28%), Positives = 50/132 (37%), Gaps = 15/132 (11%)
Query: 1 MCARGQVGRGTQLRTGRPCSQ--VPGSRWRPERLLRRQRAGGRPS----RPHPARARPGL 54
M RG +GR T +T P VP L Q + GR + RP G
Sbjct: 186 MSGRGTLGRNTPYKTLEPVKPPTVPNDYMTSPARLGSQHSPGRTASLNQRPRTHSGSSGG 245
Query: 55 SLPATLLGSRAAA---AVPLPLPPALAPGDPAMPVRTECPPPAGASAASAASLIPPPPIN 111
S GS + AVP P PP + P + ++ PPP+GA A + + P
Sbjct: 246 SGSRENSGSSSIGIPIAVPTPSPPTIGPENISV------PPPSGAPPAPPLAPLLPVSTV 299
Query: 112 TQQPGVATSLLY 123
PG A Y
Sbjct: 300 IAAPGSAPGSQY 311
>gi|239757409 PREDICTED: similar to zinc finger protein 208 [Homo
sapiens]
Length = 1059
Score = 37.7 bits (86), Expect = 0.012
Identities = 28/71 (39%), Positives = 33/71 (46%), Gaps = 9/71 (12%)
Query: 38 AGGRPSRPHPARARPGLSLPATLLGSRAAAAVPLPLPPALAPGDPAMPVRTECPPPAGAS 97
A G P +P P P L LPA + AAA P ++ G PA PV P A S
Sbjct: 280 AAGGPPQPGP--HLPPLGLPAPAASAATAAA-----PSTVSSGPPATPVAP--APSADGS 330
Query: 98 AASAASLIPPP 108
AA A +PPP
Sbjct: 331 AAPAGVGVPPP 341
Score = 29.3 bits (64), Expect = 4.4
Identities = 27/94 (28%), Positives = 34/94 (36%), Gaps = 17/94 (18%)
Query: 18 PCSQVPGSRWRPERLLRRQRAGGRPSRPHPARARPGLSLPATLLGSRAAAAVPLPLPPAL 77
PC S P+ LLR + A P+ A AA+ P P PP
Sbjct: 442 PCDLCGKSYSAPQSLLRHKAAHAPPAAAAEAP-------------KDGAASAPQP-PPTF 487
Query: 78 APGD---PAMPVRTECPPPAGASAASAASLIPPP 108
PG P P T+ A A+AA +P P
Sbjct: 488 PPGPYLLPPDPPTTDSEKAAAAAAAVVYGAVPVP 521
Score = 28.9 bits (63), Expect = 5.8
Identities = 23/61 (37%), Positives = 27/61 (44%), Gaps = 4/61 (6%)
Query: 23 PGSRWRPERLLRRQRAGGRPSRPHPARARPGLSLPATLLGSRAAAAVPLPLPPALAPGDP 82
P +W L Q G R PA PG++ P LG+ A A PLP P PG P
Sbjct: 143 PTPQWGIVDLSGHQHLFGNLKRGGPASG-PGVT-PG--LGAPAGAPGPLPAPSQTPPGPP 198
Query: 83 A 83
A
Sbjct: 199 A 199
>gi|239755509 PREDICTED: hypothetical protein [Homo sapiens]
Length = 344
Score = 37.7 bits (86), Expect = 0.012
Identities = 32/94 (34%), Positives = 36/94 (38%), Gaps = 10/94 (10%)
Query: 7 VGRGTQLRTGRPCSQVPGSRWRPERLLRRQRAGGRPSRPHPARARPGLSLPATLLGSRAA 66
V +G RP R RP RA RP RPHPA PG L G+ A
Sbjct: 244 VWQGAAQHRARPAGLARAPRARPRDPAGVSRAPPRP-RPHPASPAPG---DGALRGAEAT 299
Query: 67 AAVPLPLPPALAPGDPAMPVRTECPPPAGASAAS 100
A P AL P + PPP G +A S
Sbjct: 300 A------PAALGLVQPRPKSDIDSPPPRGRAAPS 327
>gi|239750019 PREDICTED: hypothetical protein [Homo sapiens]
Length = 344
Score = 37.7 bits (86), Expect = 0.012
Identities = 32/94 (34%), Positives = 36/94 (38%), Gaps = 10/94 (10%)
Query: 7 VGRGTQLRTGRPCSQVPGSRWRPERLLRRQRAGGRPSRPHPARARPGLSLPATLLGSRAA 66
V +G RP R RP RA RP RPHPA PG L G+ A
Sbjct: 244 VWQGAAQHRARPAGLARAPRARPRDPAGVSRAPPRP-RPHPASPAPG---DGALRGAEAT 299
Query: 67 AAVPLPLPPALAPGDPAMPVRTECPPPAGASAAS 100
A P AL P + PPP G +A S
Sbjct: 300 A------PAALGLVQPRPKSDIDSPPPRGRAAPS 327
>gi|239749695 PREDICTED: hypothetical protein XP_002347121 [Homo
sapiens]
Length = 594
Score = 37.7 bits (86), Expect = 0.012
Identities = 36/115 (31%), Positives = 47/115 (40%), Gaps = 27/115 (23%)
Query: 5 GQVGRGTQLRTGRPCSQVPGSRW-------RPERLLRRQRAGGRPSRPHPARARPGLSLP 57
G+V G + G P RW RP R+L + P+R R P +
Sbjct: 466 GRVPSGGRRGVGNP------ERWGGEAAAPRPSRVLLPELPAVDPARD--TRREPDAAAQ 517
Query: 58 ATLLGSR---------AAAAVPLPLPPALAPGDPAMPVRTECPPPAGASAASAAS 103
T LG R +A P P P +L+PG+P P PPPA A A+ AS
Sbjct: 518 RTELGGRVGKGPGAPPSALPGPRPRPDSLSPGEPPGP---PTPPPARALPAAVAS 569
Score = 33.9 bits (76), Expect = 0.18
Identities = 25/66 (37%), Positives = 33/66 (50%), Gaps = 11/66 (16%)
Query: 5 GQVGRGTQLRTGRPCSQVPGSRWRPERLLRRQRAGGRPSRPHPARARPGLSLPATLLGSR 64
G+VG+G G P S +PG R RP+ L + G P P PARA LPA + +R
Sbjct: 523 GRVGKGP----GAPPSALPGPRPRPDSLSPGEPPG--PPTPPPARA-----LPAAVASAR 571
Query: 65 AAAAVP 70
+ P
Sbjct: 572 CSLRDP 577
>gi|239746371 PREDICTED: similar to zinc finger protein 208 [Homo
sapiens]
Length = 1059
Score = 37.7 bits (86), Expect = 0.012
Identities = 28/71 (39%), Positives = 33/71 (46%), Gaps = 9/71 (12%)
Query: 38 AGGRPSRPHPARARPGLSLPATLLGSRAAAAVPLPLPPALAPGDPAMPVRTECPPPAGAS 97
A G P +P P P L LPA + AAA P ++ G PA PV P A S
Sbjct: 280 AAGGPPQPGP--HLPPLGLPAPAASAATAAA-----PSTVSSGPPATPVAP--APSADGS 330
Query: 98 AASAASLIPPP 108
AA A +PPP
Sbjct: 331 AAPAGVGVPPP 341
Score = 29.3 bits (64), Expect = 4.4
Identities = 27/94 (28%), Positives = 34/94 (36%), Gaps = 17/94 (18%)
Query: 18 PCSQVPGSRWRPERLLRRQRAGGRPSRPHPARARPGLSLPATLLGSRAAAAVPLPLPPAL 77
PC S P+ LLR + A P+ A AA+ P P PP
Sbjct: 442 PCDLCGKSYSAPQSLLRHKAAHAPPAAAAEAP-------------KDGAASAPQP-PPTF 487
Query: 78 APGD---PAMPVRTECPPPAGASAASAASLIPPP 108
PG P P T+ A A+AA +P P
Sbjct: 488 PPGPYLLPPDPPTTDSEKAAAAAAAVVYGAVPVP 521
Score = 28.9 bits (63), Expect = 5.8
Identities = 23/61 (37%), Positives = 27/61 (44%), Gaps = 4/61 (6%)
Query: 23 PGSRWRPERLLRRQRAGGRPSRPHPARARPGLSLPATLLGSRAAAAVPLPLPPALAPGDP 82
P +W L Q G R PA PG++ P LG+ A A PLP P PG P
Sbjct: 143 PTPQWGIVDLSGHQHLFGNLKRGGPASG-PGVT-PG--LGAPAGAPGPLPAPSQTPPGPP 198
Query: 83 A 83
A
Sbjct: 199 A 199
>gi|239744332 PREDICTED: hypothetical protein XP_002343119 [Homo
sapiens]
Length = 344
Score = 37.7 bits (86), Expect = 0.012
Identities = 32/94 (34%), Positives = 36/94 (38%), Gaps = 10/94 (10%)
Query: 7 VGRGTQLRTGRPCSQVPGSRWRPERLLRRQRAGGRPSRPHPARARPGLSLPATLLGSRAA 66
V +G RP R RP RA RP RPHPA PG L G+ A
Sbjct: 244 VWQGAAQHRARPAGLARAPRARPRDPAGVSRAPPRP-RPHPASPAPG---DGALRGAEAT 299
Query: 67 AAVPLPLPPALAPGDPAMPVRTECPPPAGASAAS 100
A P AL P + PPP G +A S
Sbjct: 300 A------PAALGLVQPRPKSDIDSPPPRGRAAPS 327
>gi|239743961 PREDICTED: hypothetical protein XP_002344246 [Homo
sapiens]
Length = 594
Score = 37.7 bits (86), Expect = 0.012
Identities = 36/115 (31%), Positives = 47/115 (40%), Gaps = 27/115 (23%)
Query: 5 GQVGRGTQLRTGRPCSQVPGSRW-------RPERLLRRQRAGGRPSRPHPARARPGLSLP 57
G+V G + G P RW RP R+L + P+R R P +
Sbjct: 466 GRVPSGGRRGVGNP------ERWGGEAAAPRPSRVLLPELPAVDPARD--TRREPDAAAQ 517
Query: 58 ATLLGSR---------AAAAVPLPLPPALAPGDPAMPVRTECPPPAGASAASAAS 103
T LG R +A P P P +L+PG+P P PPPA A A+ AS
Sbjct: 518 RTELGGRVGKGPGAPPSALPGPRPRPDSLSPGEPPGP---PTPPPARALPAAVAS 569
Score = 33.9 bits (76), Expect = 0.18
Identities = 25/66 (37%), Positives = 33/66 (50%), Gaps = 11/66 (16%)
Query: 5 GQVGRGTQLRTGRPCSQVPGSRWRPERLLRRQRAGGRPSRPHPARARPGLSLPATLLGSR 64
G+VG+G G P S +PG R RP+ L + G P P PARA LPA + +R
Sbjct: 523 GRVGKGP----GAPPSALPGPRPRPDSLSPGEPPG--PPTPPPARA-----LPAAVASAR 571
Query: 65 AAAAVP 70
+ P
Sbjct: 572 CSLRDP 577
>gi|117553586 dedicator of cytokinesis 5 [Homo sapiens]
Length = 1870
Score = 37.7 bits (86), Expect = 0.012
Identities = 25/76 (32%), Positives = 33/76 (43%), Gaps = 2/76 (2%)
Query: 45 PHPARARPGLSLPATLLGSRAAAAVPLPLPPALAPGDPAMPVRTECPPPAGASAASAASL 104
P +A LS P+ AA VP P PP P + + TE PP + A
Sbjct: 1792 PLTPKATRTLSSPSLQTDGIAATPVPPPPPPKSKPYEGSQRNSTELAPPLPVRREAKAP- 1850
Query: 105 IPPPPINTQQPGVATS 120
PPPP ++ G+ TS
Sbjct: 1851 -PPPPPKARKSGIPTS 1865
>gi|39930517 sterile alpha motif domain containing 1 [Homo sapiens]
Length = 538
Score = 37.7 bits (86), Expect = 0.012
Identities = 27/70 (38%), Positives = 32/70 (45%), Gaps = 3/70 (4%)
Query: 47 PARARPGLSLPATLLGSRAAAAVPLPLPPALAPGDPAMPVRTECPPPAGASAASAASLIP 106
P R + P G+ AAAA P PP AP P PV P A +AA+AA+
Sbjct: 102 PRRGATPPAPPRAPRGAPAAAAAAAP-PPTPAPPPPPAPVAAAAPARAPRAAAAAAT--A 158
Query: 107 PPPINTQQPG 116
PP QPG
Sbjct: 159 PPSPGPAQPG 168
Score = 37.7 bits (86), Expect = 0.012
Identities = 31/81 (38%), Positives = 36/81 (44%), Gaps = 8/81 (9%)
Query: 35 RQRAGGRPSRPHPARARPGLSLPATLLGSRAAAAVPLPL-PPALAPGDPAMPVRTECPPP 93
R A + P P A+PG P + AA P P PPA+AP PA P R PPP
Sbjct: 150 RAAAAAATAPPSPGPAQPG---PRAQRAAPLAAPPPAPAAPPAVAP--PAGPRRA--PPP 202
Query: 94 AGASAASAASLIPPPPINTQQ 114
A A+ P PP QQ
Sbjct: 203 AVAAREPPLPPPPQPPAPPQQ 223
Score = 32.7 bits (73), Expect = 0.40
Identities = 35/96 (36%), Positives = 35/96 (36%), Gaps = 21/96 (21%)
Query: 37 RAGGRPSRPHPARARPGLSLPATLLGSRAAAAVPLPLPPAL-APGDPAMPVR-------- 87
R G P P P RA G A AAA P P PP AP A P R
Sbjct: 103 RRGATP--PAPPRAPRGAPAAAA-----AAAPPPTPAPPPPPAPVAAAAPARAPRAAAAA 155
Query: 88 -TECPPPA----GASAASAASLIPPPPINTQQPGVA 118
T P P G A AA L PPP P VA
Sbjct: 156 ATAPPSPGPAQPGPRAQRAAPLAAPPPAPAAPPAVA 191
Score = 32.3 bits (72), Expect = 0.52
Identities = 29/99 (29%), Positives = 37/99 (37%), Gaps = 12/99 (12%)
Query: 29 PERLLRRQRAGGRPSRPHPARARP------GLSLPATLLGSRAAAAVPLPLPPALAPGDP 82
P R R A + P P A P + PA + AAAA P P PG
Sbjct: 111 PPRAPRGAPAAAAAAAPPPTPAPPPPPAPVAAAAPARAPRAAAAAATAPPSPGPAQPGPR 170
Query: 83 AM-PVRTECPPPAGASAASAA-----SLIPPPPINTQQP 115
A PPPA A+ + A PPP + ++P
Sbjct: 171 AQRAAPLAAPPPAPAAPPAVAPPAGPRRAPPPAVAAREP 209
Score = 30.0 bits (66), Expect = 2.6
Identities = 30/97 (30%), Positives = 33/97 (34%), Gaps = 6/97 (6%)
Query: 18 PCSQVPGSRWRPERLLRRQRAGGR-PSRPHPARARPGLSLPATLLGSRAAAAVPL----P 72
P P + P R R A P P PA+ P A L A A P P
Sbjct: 134 PPPPAPVAAAAPARAPRAAAAAATAPPSPGPAQPGPRAQRAAPLAAPPPAPAAPPAVAPP 193
Query: 73 LPPALAPGDPAMPVRTECPPPAGASAASAASLIPPPP 109
P AP PA+ R PP A PPPP
Sbjct: 194 AGPRRAP-PPAVAAREPPLPPPPQPPAPPQQQQPPPP 229
Score = 30.0 bits (66), Expect = 2.6
Identities = 27/82 (32%), Positives = 33/82 (40%), Gaps = 25/82 (30%)
Query: 34 RRQRAGGRPSRPHPARARPGLSLPATLLGSRAAAAVPLPLPPALAPGDPAMPVRTECPPP 93
R QRA + P A P ++ PA G R A PPA+A +P +P PPP
Sbjct: 170 RAQRAAPLAAPPPAPAAPPAVAPPA---GPRRAP------PPAVAAREPPLP-----PPP 215
Query: 94 AGASAASAASLIPPPPINTQQP 115
PP P QQP
Sbjct: 216 Q-----------PPAPPQQQQP 226
Score = 29.3 bits (64), Expect = 4.4
Identities = 27/88 (30%), Positives = 32/88 (36%), Gaps = 11/88 (12%)
Query: 30 ERLLRRQRAGGRPSRPHPARARPGLS--------LPATLLGSRAAAAVPLPLPPALAPGD 81
ER+ R R R P P R R L L + GS + PP
Sbjct: 52 ERICRMVR---RRHGPEPERTRAELEKLIQQRAVLRVSYKGSISYRNAARVQPPRRGATP 108
Query: 82 PAMPVRTECPPPAGASAASAASLIPPPP 109
PA P P A A+AA + PPPP
Sbjct: 109 PAPPRAPRGAPAAAAAAAPPPTPAPPPP 136
>gi|7662228 synaptosomal-associated protein, 91kDa homolog [Homo
sapiens]
Length = 907
Score = 37.4 bits (85), Expect = 0.016
Identities = 30/101 (29%), Positives = 40/101 (39%), Gaps = 12/101 (11%)
Query: 24 GSRWRPERLLRRQRAGGRPSRPHPARARPGLSLP----ATLLGSRAAAAVPLPLPPA--- 76
G+ W+P+ AG PS P P S+P A +G A +PPA
Sbjct: 792 GANWQPKVAPATWSAGVPPSAPLQGAVPPTSSVPPVAGAPSVGQPGAG---FGMPPAGTG 848
Query: 77 --LAPGDPAMPVRTECPPPAGASAASAASLIPPPPINTQQP 115
+ P P M + PP GA+A L P P +Q P
Sbjct: 849 MPMMPQQPVMFAQPMMRPPFGAAAVPGTQLSPSPTPASQSP 889
>gi|51702526 Wiskott-Aldrich syndrome gene-like protein [Homo
sapiens]
Length = 505
Score = 37.4 bits (85), Expect = 0.016
Identities = 27/66 (40%), Positives = 30/66 (45%), Gaps = 5/66 (7%)
Query: 45 PHPARARPGLSLPATLLGSRAAAAVPLPLPPAL-APGDPAMPVRTECPPPAGASAASAAS 103
P PAR R P SRA A P P PP+ + P P PPP A +SA S
Sbjct: 301 PPPARGRGAPPPPP----SRAPTAAPPPPPPSRPSVAVPPPPPNRMYPPPPPALPSSAPS 356
Query: 104 LIPPPP 109
PPPP
Sbjct: 357 GPPPPP 362
Score = 35.8 bits (81), Expect = 0.047
Identities = 26/74 (35%), Positives = 32/74 (43%), Gaps = 3/74 (4%)
Query: 38 AGGRPSRPHPARARPGLSLPATLLGSRAAAAVPLPLPPAL-APGDPAMPVRTEC-PPPAG 95
A GR + P P P + P SR + AVP P P + P PA+P PPP
Sbjct: 304 ARGRGAPPPPPSRAP-TAAPPPPPPSRPSVAVPPPPPNRMYPPPPPALPSSAPSGPPPPP 362
Query: 96 ASAASAASLIPPPP 109
S + PPPP
Sbjct: 363 PSVLGVGPVAPPPP 376
Score = 34.3 bits (77), Expect = 0.14
Identities = 29/86 (33%), Positives = 32/86 (37%), Gaps = 24/86 (27%)
Query: 33 LRRQRAGGRPSRPHPARARPGLSLPATLLGSRAAAAVPLPLPPALAPGDPAMPVRTECPP 92
LRRQ P P P+R P P P PP G P P R P
Sbjct: 272 LRRQA----PPPPPPSRGGP-----------------PPPPPPPHNSGPPPPPARGRGAP 310
Query: 93 PAGASAASAASLIPPPPINTQQPGVA 118
P S A A+ PPPP +P VA
Sbjct: 311 PPPPSRAPTAAPPPPPP---SRPSVA 333
Score = 33.1 bits (74), Expect = 0.31
Identities = 20/47 (42%), Positives = 21/47 (44%), Gaps = 5/47 (10%)
Query: 72 PLPPALAPGDPAMP---VRTECPPPAGASAASAASLIPPPPINTQQP 115
P PPA G P P T PPP S S A +PPPP N P
Sbjct: 300 PPPPARGRGAPPPPPSRAPTAAPPPPPPSRPSVA--VPPPPPNRMYP 344
Score = 30.4 bits (67), Expect = 2.0
Identities = 25/72 (34%), Positives = 27/72 (37%), Gaps = 14/72 (19%)
Query: 42 PSRPHPARARPGLSL----PATLLGSRAAAAVPLPLPPALAPGDPAMPVRTECPPPAGAS 97
PSRP A P + P L S A + P P P L G A P PPP G
Sbjct: 327 PSRPSVAVPPPPPNRMYPPPPPALPSSAPSGPPPPPPSVLGVGPVAPPPPPPPPPPPG-- 384
Query: 98 AASAASLIPPPP 109
PPPP
Sbjct: 385 --------PPPP 388
Database: hs.faa
Posted date: Aug 4, 2009 4:42 PM
Number of letters in database: 18,247,518
Number of sequences in database: 37,866
Lambda K H
0.319 0.136 0.431
Gapped
Lambda K H
0.267 0.0410 0.140
Matrix: BLOSUM62
Gap Penalties: Existence: 11, Extension: 1
Number of Hits to DB: 14,425,961
Number of Sequences: 37866
Number of extensions: 851077
Number of successful extensions: 9025
Number of sequences better than 10.0: 30
Number of HSP's better than 10.0 without gapping: 175
Number of HSP's successfully gapped in prelim test: 713
Number of HSP's that attempted gapping in prelim test: 6272
Number of HSP's gapped (non-prelim): 2737
length of query: 300
length of database: 18,247,518
effective HSP length: 102
effective length of query: 198
effective length of database: 14,385,186
effective search space: 2848266828
effective search space used: 2848266828
T: 11
A: 40
X1: 16 ( 7.4 bits)
X2: 38 (14.6 bits)
X3: 64 (24.7 bits)
S1: 41 (21.7 bits)
S2: 61 (28.1 bits)
Search results were obtained with NCBI BLAST and RefSeq entries.
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Guide to the Human Genome
Copyright © 2010 by Stewart Scherer. All rights reserved.